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[Other Clones] [Human Genome] [RefSeq] [UniGene] [Assembly] 

Clone Name:  OVRM1_0158_D08

Library: OVRM1 (Ovary)
Individual: M1, Meishan (Chinese)

Nucleotide sequence:   (length: 1,501)  [FASTA format sequence]
GCTTGCGGAG CCCATAGGTG TGGCCCACTG ACGATCGGTG GGAGTCGTGC GTGGGGTTGG
GAGTTGACTC CGGGTGTACT TCTGTGTTTC TGCTCATCCT TTCCGTAG
AT GTCTCATATG
GAGCTGGGGT TGGACTCGGG TGACGATGAC TTGCTGGGCT TCCTGTTAGA GGAAAGCGGA
GGTCTGGGGG CGGCGCGGGA CGAAGCCTTG GAGGCGCCCC TGGATTGGGA GCTACCACTT
TCCGAGGCAT TGAGCGATTG GGACGTAGAG GATTTCCTGA GCTGCCTGTC GAGTCCCCCA
GCATCGTTGA CCGATTTTAG CCACTCTGAC CCCTATCTTG TCCACCATGA TCACACCTAT
TCCCTGTCAC AGGAGTATGT CTCCATAGAT CTAGATAATG AGGATTATGA GAAGGAAGGG
GCCCGAATGA CTTCACTGCG TGTGGAGGCG CCCGCAGAGC AGGAGATTGG TGAGCTGATA
CTGACGGAGG AGGAGAAGAG GCTTTTGGAG AAGGAGGGGC TTACTCTGCC CGGGACACTT
CCTCTCACTA GGATGGAGGA ACAAGTTCTG AGACGAGTGC GAAGGAAGAT TCGAAACAAA
AAGTCTGCTC AAGAGAGCCG CAGGAAGAAG AAGGTGTATG TGGGGAGTTT AGAGAGCAGG
GTCCTGAAAT ACTCGGCCCA GAATCTGGAG CTACAGAACA AAGTACAGCT CCTGGAGGAG
CAGAATCTGT CCCTTTTGGA TCAGTTGAGG AGGCTGCAGT CCATGGTGAT TCAGACGGCA
AACAAAGCCA GCAGCAGCAG CACCTGCATC TTGGTCCTGC TCTTCTCCTT CTGTCTCCTC
TTCGTACCTG CCATGTACTC CTCGGACACA AGGGGGAGCC CGCCAGCCGA GCATGGAGTG
TTGTCCCGCC AGCTTCGTGC CCTCCCCAGC GAGGACGTTC CCCAGCGGGA CCTGCCTGCA
CTGCAGTCAG AGGTACCACA GGACAGCTCA ACCCACGAGC TCCAGGCTCC TGGCAACTCT
TGCTGCCTGT TCCACCACAT GGCTTGGGCT CCTGGGGCAG AATCGCCCAT GAAGCTGCCA
CTGCCCGACC GCTTCTCAAG GTCTTCTAGC CCAGGTCCCA TCTTCCCCCT GCATGCAAAT
CTCACAAGAG AGGGAGGATG GCCCCCTACC CACAGCCCCA TATCTGTTAC CTTGCAGGGC
AGGTACTCAG GCTAGATGTG AGAATGCAGG GGGCCTCAGC CAGAGCCTGG TGCCCCCAGT
CTGTGTTCAA AGGAAAAGGA ATGGGAGAGG GTGAGCCTCA GGTCCTGTCC CCTGTCAGGA
AGCCTGAGGG CACAAACACA CCACACTTAC TGGCTTTCTG GGGTTTTATT TGCACCCATG
TATGTCTGTT GTTCCATTAA GGGGCCTGGG AGAGTCCACT GACTTCCTTG AACATTTCAT
GCAATGAGGG GATGGGGTGA AGAAAGAAAT AAATAAGTGA TTCTGAAAAA AAAAAAAAAA
A

Deduced amino acid sequence:  (length: 368) [FASTA format sequence]
MSHMELGLDS GDDDLLGFLL EESGGLGAAR DEALEAPLDW ELPLSEALSD WDVEDFLSCL
SSPPASLTDF SHSDPYLVHH DHTYSLSQEY VSIDLDNEDY EKEGARMTSL RVEAPAEQEI
GELILTEEEK RLLEKEGLTL PGTLPLTRME EQVLRRVRRK IRNKKSAQES RRKKKVYVGS
LESRVLKYSA QNLELQNKVQ LLEEQNLSLL DQLRRLQSMV IQTANKASSS STCILVLLFS
FCLLFVPAMY SSDTRGSPPA EHGVLSRQLR ALPSEDVPQR DLPALQSEVP QDSSTHELQA
PGNSCCLFHH MAWAPGAESP MKLPLPDRFS RSSSPGPIFP LHANLTREGG WPPTHSPISV
TLQGRYSG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Other Clones Sharing Similar Sequences:      TOP

Change score limit to  


Alignment to Human Genome Sequences:      TOP

Change score limit to  


BLAST on RefSeq (Human):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCREB3cyclic AMP-responsive element-binding protein 3 [Homo sapiens]. 374e-103O
Contig/Assembly ProteinCREB3L4cyclic AMP-responsive element-binding protein 3-like protein 4 [Homo sapiens]. 97.14e-20
Contig/Assembly ProteinCREB3L3cyclic AMP-responsive element-binding protein 3-like protein 3 [Homo sapiens]. 85.51e-16
Contig/Assembly ProteinCREB3L2cyclic AMP-responsive element-binding protein 3-like protein 2 [Homo sapiens]. 70.15e-12
Contig/Assembly ProteinCREB3L1cyclic AMP-responsive element-binding protein 3-like protein 1 [Homo sapiens]. 66.66e-11


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCreb3cyclic AMP-responsive element-binding protein 3 [Mus musculus]. 2724e-73O
Contig/Assembly ProteinCreb3l4cyclic AMP-responsive element-binding protein 3-like protein 4 [Mus musculus]. 92.86e-19
Contig/Assembly ProteinCreb3l3cyclic AMP-responsive element-binding protein 3-like protein 3 [Mus musculus]. 83.64e-16
Contig/Assembly ProteinLOC638517PREDICTED: cyclic AMP-responsive element-binding protein 3-like protein 2-like [Mus musculus]. 70.14e-12
Contig/Assembly ProteinCreb3l2cyclic AMP-responsive element-binding protein 3-like protein 2 [Mus musculus]. 70.14e-12


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC611934PREDICTED: similar to cAMP responsive element binding protein 3 [Canis familiaris]. 395e-110O
Contig/Assembly ProteinLOC612303PREDICTED: similar to cAMP responsive element binding protein 3-like 4 [Canis familiaris]. 943e-19
Contig/Assembly ProteinLOC485046PREDICTED: similar to cAMP responsive element binding protein 3-like 3 [Canis familiaris]. 84.33e-16
Contig/Assembly ProteinLOC491369PREDICTED: similar to cAMP responsive element binding protein 3-like 2 [Canis familiaris]. 70.15e-12
Contig/Assembly ProteinLOC483636PREDICTED: similar to cAMP responsive element binding protein 3-like 1 [Canis familiaris]. 66.66e-11


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCREB3cyclic AMP-responsive element-binding protein 3 [Bos taurus]. 436e-122O
Contig/Assembly ProteinCREB3L4PREDICTED: cAMP responsive element binding protein 3-like 4-like [Bos taurus]. 97.42e-20
Contig/Assembly ProteinCREB3L3cyclic AMP-responsive element-binding protein 3-like protein 3 [Bos taurus]. 83.64e-16
Contig/Assembly ProteinCREB3L2cyclic AMP-responsive element-binding protein 3-like protein 2 [Bos taurus]. 70.15e-12


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCREB3cyclic AMP-responsive element-binding protein 3 [Sus scrofa]. 560e-160
Contig/Assembly ProteinLOC100627545PREDICTED: hypothetical protein LOC100627545 [Sus scrofa]. 1303e-30
Contig/Assembly ProteinCREB3L4cyclic AMP-responsive element-binding protein 3-like protein 4 [Sus scrofa]. 942e-19
Contig/Assembly ProteinLOC100522979PREDICTED: cyclic AMP-responsive element-binding protein 3-like protein 3-like isoform 2 [Sus scrofa]. 84.71e-16


Oligo-microarray probe:      TOP
Probe IDRel.Probe sequence
AGPOA4-003694.1CCTTGAACATTTCATGCAATGAGGGGATGGGGTGAAGAAAGAAATAAATAAGTGATTCTG


Assembly member:      TOP
ReleaseContig/SingletClonesDirection
2003053120030531C-0035567fwd
2003082620030826C-0008728fwd
2004020420040204C-0008649fwd
2005032220050322C-00082210fwd
2006061120060611C-00085114fwd
2007080620070806C-00757514fwd
2008051520080515C-0017678fwd
2010100120101001C-00692811fwd
2011060120110601C-00769511fwd