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[Other Clones] [Human Genome] [RefSeq] [UniGene] [Assembly]
Clone Name:
OVRM1_0223_E01
Library: OVRM1 (Ovary)
Individual: M1, Meishan (Chinese)
Nucleotide sequence:
(length: 1,388)
[FASTA format sequence]
ACTCAGTGCG CAGGTGCGAA GCCTCTTGGC TGGGGCCCTG GCCGGGGGCT GGCTTGAAGA
CGCGTCGTTT GGTTTTGGAC GCTTTGAGAG AGCCGTCTGG TATCAACCGC TGGGCGGAAG
GCGTTTGTCA GGGGCCCGGC CACGAACGAG GCCCACGAGT TTCCCGATGG TGTCCATGAC
TTTCAAGCGG CTGTTGCCAT GTCCGCACCG GGACGATCAT CCTGGGGACC TGGTACATGG
TGATCAATCT GTTGATGGCA ATTTTGCTGA CTGTTGAGGT GACACATCCA AACTCAGTGC
CAGCTGTCAA CATTCAGTAT GGAGTCATTG GCAATTACTA TTCATCTGAG AGAATGGCAG
ATAATGCCTG TGTTCTTTTT GCGGTCTCTG TTCTTATGTT TATAATCAGT TCAATGCTGG
TTTATGGAGC AATTTCTTAT CAAGTGGGTT GGTTGATTCC ATTCTTCTGT TACCGGCTTT
TTGACTTCGT TCTCAGCTGC CTGGTTGCTA TCAGTTCTCT AACTTACTTG CCAAGAATCA
AAGAATATCT GGATCAATTA CCTGATTTCC CCTATAAAGA CGACCTCCTG GCATTGGACT
CCAGCTGCCT CCTGTTCATT GTTCTTGTGT TCTTTGCCTT GTTCATCATT TTTAAGGCTT
ATCTAATCAA CTGTGTTTGG AACTGTTACA AATACATCAA CAACAGAAAC ATGCCAGAGA
TTGCTGTGTA TCCTGCCTTT GAAGCACCTC CACAGTATGT TTTGCCAACC TATGAAATGG
CAGTGAAGAT GCCTGAGAAA GAACCCCCGC CTCCTTACAT ACCTGCCTGA AGAAATGCTG
CCTTTGTCAA TAAACCCTAT ACCAGCTTTT CGTCTTGTTT ATTTTACAGA ATGCTGCAAT
ACAGGGCTCT TCAAACTTGT TTGATATAAA GTACATTTTA CTTTAAGCAT TTATTTTCAA
ACACTAACAA GCTTGTTGGA TATCTATGAA AAGACTTTTG TTGTTTTGTT CAGTATATTA
CATTTTAATA GTTTTTGAAG ACAATCTAGG TTAAGAGCAA AATGCCATTG TTTGCCTTTG
ATTGGGGGGT GGGGAGGGGG CATTCTCCAC ACATAATCTT TTTTAACTTT GCACTTTCTT
CATATCACAG TTTGTATTTT GGTTATTTGC TGCCCTGGAT ACTTTCAGGA AGAATGAAGT
AAATACTCGG GGTGGGCAAG TTTAGTATAA GATCTGAAGT TTTCAGCTGT GAAAAAAACA
AAAAATATAC TACATTTTAT CTTGACTGTG GGTGATGATG GTTGCATGTT TCTAATTTGT
ACGTGTTTCC ATCTTTGTGA TAAGATGCTT TAATAAATCT CTTAAATATT AAAAAAAAAA
AAAAAAAA
Deduced amino acid sequence: (length: 197) [FASTA format sequence]
MVINLLMAIL LTVEVTHPNS VPAVNIQYGV IGNYYSSERM ADNACVLFAV SVLMFIISSM
LVYGAISYQV GWLIPFFCYR LFDFVLSCLV AISSLTYLPR IKEYLDQLPD FPYKDDLLAL
DSSCLLFIVL VFFALFIIFK AYLINCVWNC YKYINNRNMP EIAVYPAFEA PPQYVLPTYE
MAVKMPEKEP PPPYIPA
SNP mapping information
BLAST on RefSeq (Human): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| LAPTM4A | lysosomal-associated transmembrane protein 4A [Homo sapiens]. | 351 | 8e-97 | O |
|
| LAPTM4B | lysosomal-associated transmembrane protein 4B [Homo sapiens]. | 152 | 9e-37 | |
BLAST on RefSeq (Mouse): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| Laptm4a | lysosomal-associated transmembrane protein 4A [Mus musculus]. | 348 | e-107 | |
|
| Laptm4b | lysosomal-associated transmembrane protein 4B [Mus musculus]. | 150 | 2e-36 | O |
|
| Laptm5 | lysosomal-associated transmembrane protein 5 [Mus musculus]. | 50.4 | 3e-06 | |
BLAST on RefSeq (Dog): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| LOC475678 | PREDICTED: similar to lysosomal-associated protein transmembrane 4 alpha [Canis familiaris]. | 353 | 3e-97 | O |
|
| LOC475042 | PREDICTED: similar to lysosomal-associated transmembrane protein 4 beta [Canis familiaris]. | 149 | 5e-36 | |
BLAST on RefSeq (Cattle): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| LAPTM4A | lysosomal-associated transmembrane protein 4A [Bos taurus]. | 353 | 3e-97 | O |
|
| LAPTM4B | lysosomal-associated transmembrane protein 4B [Bos taurus]. | 154 | 1e-37 | O |
|
| LOC524129 | PREDICTED: lysosomal-associated protein transmembrane 4B-like [Bos taurus]. | 120 | 2e-27 | O |
BLAST on RefSeq (Pig): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| LOC100516188 | PREDICTED: lysosomal-associated transmembrane protein 4A-like [Sus scrofa]. | 354 | 7e-98 | |
Oligo-microarray probe: TOP
Probe ID | Rel. | Probe sequence |
---|
AGPOA4-09420 | 4.1 | GTGATGATGGTTGCATGTTTCTAATTTGTACGTGTTTCCATCTTTGTGATAAGATGCTTT |
Assembly member: TOP