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[Other Clones] [Human Genome] [RefSeq] [UniGene] [Assembly] 

Clone Name:  SPL01_0053_F09

Library: SPL01 (Spleen)
Individual: LWD1, Crossbred pig ((Landrace x Large White) x Duroc, Western)

Nucleotide sequence:   (length: 1,028)  [FASTA format sequence]
GCTTTTATGA TTTAACGTTA CTGTGTAAGT ACTTTCCCAC ATTGCTACAC TTGCTTGGTG
GTTCTCATGG AAATTCCATT TTCCATGATC TTGACATTCT GGCTGGTGTT TCTGTCATCG
TCGACTCTGG CTTTCTGTTA CCTGAGTCAG GGTGTCTCTC CGGTCTGAGC TCTCGATCAC
ACTTAGCTTT CCTCTTGCAT GTCCTGTGTC AAGCAGCTTC TTCTTCGTCC ACTCTTGTGA
AACCTTCTGA CCGGAGGCTG CTACAGCCTT GCCACTTCCT TTACGGGGCT CAAGCCCCCT
CACACCCGTC ATGCTCACTA GTACCCGATC ATCCTCTGCC CGGGAGTGCC ACCCCAGTTA
ACTGCCCAGG GATTCCGTCT CCACCAAAGA GCCTCTGCAA ACCCTGCCTC CTGGAAAAAC
CTCTTCCCTA TTGGTAATCC ATGA
ATGCTA AGATGCATTG TAGATATAAT TTATATTCAC
GGCCATTTAT GCCCTGCCTT ATGTAGGCAG TTCAGCACCA AGGAGAGTGC CTGTTTGCTT
TTGCTTGGGT GCAAGGTCAG TGGAGGATTT ACTGTGTTTA GGGCTCTGTA GTGCTGTTGG
CACGATGTAA TTTTTCCATA ATAGATGAAA AGCCAAACCC TGTATAAACA CACTTTAATA
ATGGTGAAGG CACTGGCAGA GTTGTGTGCC GAGGAAATAT TAAAGTTCAC ACTCCTGTAG
CTTAGACTTA ATTGAAGCCA GTAGTCTTCG TATTTACATT TGGGTTGTTT GTTTGAATGT
CAGACCTGGA GTGCTTCATC AGATGTCTTC CACTCCTCTA CGTATAACTG CTTAACCACC
TGCGCCAGGA TTCCCTTTGG TCTCTATCTT GTCTCCGGGC CCAGGGACAG AGTCGCATTT
TCCTTTGTGT GCCTTGGACA TCCTGACATG GTGCCTGGCT TCCTTTGCTC CGATTATCTC
TAGTGCTGAG AGGCACAGAT TCCTCATTAG CTGTTGCTTC ACTGACCAAA AAAAAAAAAA
AAAAAAAA

Deduced amino acid sequence:  (length: 48) [FASTA format sequence]
MLRCIVDIIY IHGHLCPALC RQFSTKESAC LLLLGCKVSG GFTVFRAL


SNP mapping information
SNP IDRel.Chr.Location (cM)
SNPW012540.9b1139.4
SNPW012540.91b1139.4


Other Clones Sharing Similar Sequences:      TOP

Change score limit to  


Alignment to Human Genome Sequences:      TOP

Change score limit to  


BLAST on RefSeq (Human):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Oligo-microarray probe:      TOP


Assembly member:      TOP
ReleaseContig/SingletClonesDirection
2004020420040204C-0035942fwd
2005032220050322C-0084692fwd
2006061120060611C-0088812fwd
2007080620070806C-0045112fwd
2008051520080515C-0093182fwd
2010100120101001C-0154622fwd
2011060120110601C-0168532fwd