Supplementary Table 2

This page demonstrates features of the several sequences of the porcine genes newly identified in the PEDE assemblies.

Gene Pig Human Mouse
Accession no. (GenBank) CDS (bp) Accession (RefSeq) CDS (bp) % Homology Accession (RefSeq) CDS (bp) % Homology
nucleotide level amino-acid level nucleotide level amino-acid level
CCR7 AB116555 1143 NM_001838 1137 89.5 92.1 NM_007719 1137 85.3 87.1
CD2 AB116556 1023 NM_001767 1056 73.2 59.0 NM_013486 1035 63.0 44.1
CD3D AB116557 516 NM_000732 516 81.2 70.3 NM_013487 522 74.0 62.8
CD74 AB116558 645 NM_004355 699 83.6 76.9 NM_010545 648 80.4 75.6
CD8B1 AB116559 630 NM_172213 732 75.2 61.4 NM_009858 642 64.8 46.7
CXCR4 AB116560 1062 NM_003467 1059 91.1 94.3 NM_009911 1080 83.7 89.0
IFNAR1 AB116561 1863 NM_000629 1674 78.5 66.0 NM_010508 1773 64.8 48.1
IL10RB AB116562 1089 NM_000628 978 84.2 79.0 NM_008349 1050 73.2 64.8
IRF3 AB116563 1260 NM_001571 1284 82.8 77.9 NM_016849 1260 74.9 68.2
STAT1 AB116564 2274 NM_007315 2253 91.4 96.6 NM_009283 2250 85.6 92.1