[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20030531C-001071
Length:
1,041
Sequence:
[FASTA format sequence]
CACTCCAGGA GGACACGCGG GCAGCTGGGG CGTGGGATTC CTGCAGAGAC CTCGGTGGAG
GGTCAGAGGC CCGCGCCGAG CCCGTGTCCA CGGGGGTCGC TCCTCCTCCG CTGGAGGGAC
TGACTTACAA TTTGGGTCCA GAGCGCACAG CGCGGGGCTA CGAGGGTGCG CAGTTCCCCG
GGTCCCCCGA GTCCCCGACG CCCGGCGAGG AGATCTGGGT TTTCCAGCGC GCCCCGCAAG
ACGCCTCTGC TCAGGAGCCC GGCGCCGGGG CCCCGCGATG GCCGCGGGCC GCAGCCTCAG
GGAGCTGCTG CCGCGTGGGT GCCGGGGCGC CCCTCCCTAG CGGGGCGCAG CCTGCGCCCG
GTCCCCGCCC GACCAGCGGA ATGGGGGGCG GAGGGTCTGC CCTGAGGGTC TGCGCGGACC
ACCGCGGGGG CATCAACTGG CTCAGCCTGA GCCCCGACGG GCAGCGCCTG CTGACGGGCA
GCGAGGACGG CACCGCCCGG CTCTGGAGCA CCGCGGACGG CCAGTGCTGC GCCCTCCTGC
AAGGACATGA AAGCTACGTG ACCTTCTGCC AGCTGGAGGA CGAAGCTGCC TTCACGTGCA
GCGCTGACTG CACCATCCGG AAGTGGGACG TGCTGACCGG GCAGTGTCTG CAGGTGTTCC
GGGGACACAC ATCCATTGTG AACAGGATCC TGGTCACCAA CAACCAGCTC TTCAGCAGTT
CCTATGACCG GACAGCTCGC GCCTGGAGTG TAGACAAAGG GCAGGTGTCG CGGGAGTTCC
GGGGCCACCG CAACTGTGTG CTGACTCTAG CCTACTCTGC CCCCTGGGAC CTGCCTGGGG
CTCCCTGCGT GGAGGAGGCC GTGGCTGGGG GGCTTCTGGT GACGGGAAGC ACAGACGGCA
CAGCCAAGGT GTGGCAAGTG GCCAGTGGCT GCTGCCACCA GACGCTGCGG GGCCACACGG
GCGCCGTGCT CTGCCTGGTG TTGGACACAC CTGGGCACAC AGCCTTCACC GGCAGCACCG
ACGCCACCAT CCGCGCCTGG G
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | FBXW7 | F-box protein FBW7 isoform 1; archipelago, Drosophila, homolog of; F-box protein FBW7; F-box protein SEL-10; homolog of C elegans sel-10 | 112 | 3e-25 | |
|
|
| FBXW7 | F-box protein FBW7 isoform 2; archipelago, Drosophila, homolog of; F-box protein FBW7; F-box protein SEL-10; homolog of C elegans sel-10 | 112 | 3e-25 | |
|
|
| TAF5 | TBP-associated factor 5 isoform 1; TATA box binding protein (TBP)-associated factor 2D; TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100 kD; TATA box binding protein (TBP)-associated factor, RNA polymerase II, D, 100kD; transcription initiation factor TFIID 100 kD subunit | 109 | 4e-24 | |
|
|
| PAFAH1B1 | platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD); lissencephaly 1 protein; Platelet-activating factor acetylhydrolase, isoform 1B, alpha subunit | 100 | 2e-21 | |
|
|
| WDR5 | WD repeat domain 5 protein; WD-repeat protein 5; likely ortholog of mouse WD repeat protein BIG-3 (BMP-2-induced gene 3 kb) | 100 | 2e-21 | O |
|
|
| WDR5 | WD repeat domain 5 protein; WD-repeat protein 5; likely ortholog of mouse WD repeat protein BIG-3 (BMP-2-induced gene 3 kb) | 100 | 2e-21 | O |
|
|
| WDR5B | WD repeat domain 5B | 97.8 | 1e-20 | O |
|
|
| FBXW11 | F-box and WD-40 domain protein 1B isoform A; F-box protein Fbw1b; beta-transducin repeat-containing protein 2 | 97.1 | 2e-20 | |
|
|
| FBXW11 | F-box and WD-40 domain protein 1B isoform C; F-box protein Fbw1b; beta-transducin repeat-containing protein 2 | 97.1 | 2e-20 | |
|
|
| FBXW11 | F-box and WD-40 domain protein 1B isoform B; F-box protein Fbw1b; beta-transducin repeat-containing protein 2 | 97.1 | 2e-20 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Fbxw7 | F-box and WD-40 domain protein 7, archipelago homolog; f-box only protein 30; F-box-WD40 repeat protein 6 | 112 | 2e-25 | |
|
|
| Taf5 | RIKEN cDNA 6330528C20 gene | 109 | 3e-24 | |
|
|
| Wdr5 | WD repeat domain 5; Bmp2-induced gene | 100 | 1e-21 | O |
|
|
| Pafah1b1 | platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit; lissencephaly-1 protein; platelet-activating factor acetylhydrolase IB alpha subunit | 100 | 2e-21 | |
|
|
| Fbxw11 | F-box and WD-40 domain protein 1B | 97.1 | 1e-20 | |
|
|
| Wdr5b | WD repeat domain 5B | 94.7 | 6e-20 | O |
|
|
| Btrc | beta-transducin repeat containing protein; SCF b-TRCP | 92.8 | 2e-19 | |
|
|
| Plrg1 | pleiotropic regulator 1 | 89.4 | 3e-18 | |
|
|
| Copb2 | coatomer protein complex, subunit beta 2 (beta prime) | 87 | 1e-17 | O |
|
|
| Taf5l | TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor | 85.5 | 4e-17 |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets) (PHEX), mRNA | 40.1 | 0.20 | |
|
|
| Mus musculus, clone MGC:38609 IMAGE:5355351, mRNA, complete cds | 40.1 | 0.20 | |
|
|
| Bos taurus endothelin converting enzyme-1a (ECE-1a) mRNA, complete cds | 40.1 | 0.20 | |
|
|
| UI-H-BW0-aip-e-11-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2729973 3', mRNA sequence | 38.2 | 0.79 | |
|
|
| 601656847R1 NIH_MGC_67 Homo sapiens cDNA clone IMAGE:3865931 3', mRNA sequence | 38.2 | 0.79 | |
|
|
| Homo sapiens C1q-related factor (CRF), mRNA | 38.2 | 0.79 | |
|
|
| Homo sapiens histone deacetylase 10 (HDAC10), mRNA | 38.2 | 0.79 | |
|
|
| Mus musculus, clone IMAGE:4188338, mRNA, partial cds | 38.2 | 0.79 | |
|
|
| Mus musculus C1q related factor (C1qrf-pending), mRNA | 38.2 | 0.79 | |
|
|
| Mus musculus RIKEN cDNA E430021K24 gene (E430021K24Rik), mRNA | 38.2 | 0.79 |
|
20030531C-001071 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0031_F06.b.ab1 : aggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0011_G02.b.ab1 :
20030531C-001071 : ..........................CACTCCAGGAGGACACGCGGGCAGCTGGGGCGTG
---------+---------+---------+---------+---------+---------+ 34
OVR01_0031_F06.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxCACTCCAGGAGGACACGCGGGCAGCTGGGGCGTG
OVR01_0011_G02.b.ab1 :
20030531C-001071 : GGATTCCTGCAGAGACCTCGGTGGAGGGTCAGAGGCCCGCGCCGAGCCCGTGTCCACGGG
---------+---------+---------+---------+---------+---------+ 94
OVR01_0031_F06.b.ab1 : GGATTCCTGCAGAGACCTCGGTGGAGGGTCAGAGGCCCGCGCCGAGCCCGTGTCCACGGG
OVR01_0011_G02.b.ab1 : ncaacaattgaacatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20030531C-001071 : GGTCGCTCCTCCTCCGCTGGAGGGACTGACTTACAATTTGGGTCCAGAGCGCACAGCGCG
---------+---------+---------+---------+---------+---------+ 154
OVR01_0031_F06.b.ab1 : GGTCGCTCCTCCTCCGCTGGAGGGACTGACTTACAATTTGGGTCCAGAGCGCACAGCGCG
OVR01_0011_G02.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaCACAGCGCG
20030531C-001071 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
---------+---------+---------+---------+---------+---------+ 214
OVR01_0031_F06.b.ab1 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
OVR01_0011_G02.b.ab1 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
20030531C-001071 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAGCCCGGCGCCGGGGCCCC
---------+---------+---------+---------+---------+---------+ 274
OVR01_0031_F06.b.ab1 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAgcccggcgccggggcccc
OVR01_0011_G02.b.ab1 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAgcccggcgccggggcccc
20030531C-001071 : GCGATGGCCGCGGGCCGCAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
---------+---------+---------+---------+---------+---------+ 334
OVR01_0031_F06.b.ab1 : gcgatggccgcgggccgcAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
OVR01_0011_G02.b.ab1 : gcgatggccgcgggccgcAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
20030531C-001071 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
---------+---------+---------+---------+---------+---------+ 394
OVR01_0031_F06.b.ab1 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
OVR01_0011_G02.b.ab1 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
20030531C-001071 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
---------+---------+---------+---------+---------+---------+ 454
OVR01_0031_F06.b.ab1 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
OVR01_0011_G02.b.ab1 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
20030531C-001071 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
---------+---------+---------+---------+---------+---------+ 514
OVR01_0031_F06.b.ab1 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
OVR01_0011_G02.b.ab1 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
20030531C-001071 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
---------+---------+---------+---------+---------+---------+ 574
OVR01_0031_F06.b.ab1 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
OVR01_0011_G02.b.ab1 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
20030531C-001071 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
---------+---------+---------+---------+---------+---------+ 634
OVR01_0031_F06.b.ab1 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
OVR01_0011_G02.b.ab1 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
20030531C-001071 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
---------+---------+---------+---------+---------+---------+ 694
OVR01_0031_F06.b.ab1 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
OVR01_0011_G02.b.ab1 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
20030531C-001071 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
---------+---------+---------+---------+---------+---------+ 754
OVR01_0031_F06.b.ab1 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
OVR01_0011_G02.b.ab1 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
20030531C-001071 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
---------+---------+---------+---------+---------+---------+ 814
OVR01_0031_F06.b.ab1 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
OVR01_0011_G02.b.ab1 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
20030531C-001071 : CTCTGCCCCCTG*GGACCTGCCTGGGGCTCCCTGCGTGGAGGAGGCC*GTGGCTGGGGGG
---------+---------+---------+---------+---------+---------+ 872
OVR01_0031_F06.b.ab1 : CTCTGCCCCCTGGGGACCTGCCTGGGGGTCCCTGCGTGGAAGAGGCCCGGGGCTGGGGGG
OVR01_0011_G02.b.ab1 : CTCTGCCCCCTG*GGACCTGCCTGGGGCTCCCTGCGTGGAGGAGGCC*GTGGCTGGGGGG
20030531C-001071 : CTTCTGGTGACGGGAAGCACAGACGGCACAGCCAAGGTGTGGCAAGTGGCCAGTGGCTGC
---------+---------+---------+---------+---------+---------+ 932
OVR01_0031_F06.b.ab1 : Ctttctggtgacgggaagcacagacgggacaaccaaggggggggcaggtgggcagtgggc
OVR01_0011_G02.b.ab1 : CTTCTGGTGACGGGAAGCACAGACGGCACAGCCAAGGTGTGGCAAGTGGCCAGTGGCTGC
20030531C-001071 : TGCCACCAGACGCTGCGGGGCCACACGGGCGCCGTGCTCTGCCTGGTGTTGGACACACCT
---------+---------+---------+---------+---------+---------+ 992
OVR01_0031_F06.b.ab1 : tggtgccaccaaacgctgcgggggccacccgggcgcccgggttttgcctgggggttggac
OVR01_0011_G02.b.ab1 : TGCCACCAGACGCTGCGGGGCCACACGGGCGCCGTGCTCTGCCTGGTGTTGGACACACCT
20030531C-001071 : GGGCACACAGCCTTCACCGGCAGCACCGACGCCACCATCCGCGCCTGGG...........
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 : aaaccttgggcccccaagccctttcccggggagaaccgaaagcccccctttcccccgccc
OVR01_0011_G02.b.ab1 : GGGCACACAGCCTTCACCGGCAGCACCGACGCCACCATCCGCGCCTGGGacttcttgagt
20030531C-001071 : ............................................................
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 : tgggaacattcctgagaggggggaaccccttgggccggggttttcgggggagccccccag
OVR01_0011_G02.b.ab1 : ggggaggcgctgcgcgtgttccgggagcacaggggctcatcatctgtcctggagctggtg
20030531C-001071 : ............................................................
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 : gggcttctccctttattttttttttttgggaaagttgggttggagaaaccccgggggacc
OVR01_0011_G02.b.ab1 : aaccggcacgtgtactcgggcaacggcgacagggacggttcaagtgctgggttggcggga
20030531C-001071 : ............................................................
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 : cggtggggtatttcttctcgggggcggccaaggcccccccccccaaaaaaga
OVR01_0011_G02.b.ab1 : ccggggcgaggggcgtggcgccacgtttcccccgccccccaaaaccccggggtgaagccc
20030531C-001071 : ............................................................
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 :
OVR01_0011_G02.b.ab1 : ccccttaaagataccccccgcccggggggccc
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