[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20030531C-001577
Length:
1,308
Sequence:
[FASTA format sequence]
AGACGCTGTC CTCGCGGCGC CGCCGGCCGG CCGGAGCCTC CTCCACCGAG GGGACCCCGC
AACCGCGGCG CCCGGGTGGC AGCGATCCCG CCACAGCCTC CCCGAGGGCC CGTCCGGAGC
CGGGGCGGGG CGGGGCGCCC TCCGCAACCA CGTGTGCCCG CCTCGCAGCG CTGCGCGCCC
GCCGCCTTTC CCGGGCTCGC CCGCGGCCCG GCCGGAGCGC CTCGCCGGAG GTTTGTCCCC
GCTCGCTCGC CGTAGCGCGC GGCCCCGCGG AGCGCAGGGC GCGCGGCCGA CATGGGCGAG
ACCATATCCC GGAGGCTCTG GTTCCAGGGG GACTGGGACG CGGAAATGGA GGAGCGGGCG
TTCCCCAACC CTTTCCCGGA CTACGAGGCC GCGGCCGCCG TGCCGGCGGA GGAGCCGCCA
TGTGCTCGCC CTGCGCTCAC CCCGGAGGAG CTCGGCCTCC CTTTCCACAG CGACGGGAAG
ATCATTCATA ATTTCACAAG GCGGATCCAG AGCAAAATCA AAGATCTTCT ACAGCAGATG
GAAGAAGGGC TGAAGACAGC TGATCCGCAC GATTGCTCTG CTTACACGGG TTGGACAGGC
ATAGCCCTTT TGTACCTTCA ATTGTACCGG GTCACATGTG ACCAGAACTA TCTGCTCCGA
TCCCTGGATT ACGTAAAAAG AACACTTCGG AATCTGAACG GCCGGAGGGT CACTTTCCTC
TGTGGAGATG CCGGGCCCCT GGCCGTCGGA GCTGTGGTGT ATCACAAACT CAAAAGTGAT
GGCGAGTCCC AGGAATGCAT CACAAAACTC CTGCAGCTCC AGAGAACCAT CGTCTGCCGC
GACTCGGACC TTCCCGATGA GCTGCTTTTC GGCCGCGCGG GCTACCTGTA CGCCTTGCTC
TATGTGAACA CGGAGATGGA TCCGGGCGCC GTGTGCGAAT CAGCCATCAA AGAGGTGGTC
GATGCTATTA TTGTTTCGGG CAAGACTTTG TCAAAGGAAG AAAGGAAGGC CGAGCGCTGC
CCCCTGTTGT ACCAGTGGCA CAGGAAGCAG TACGTCGGAG CCGCCCATGG CATGGCTGGG
ATCTACTACA TGCTAATGCA GCCAGCAGCA AAAGTGGACC AAGAAACCTT GACAGAGATG
GTGAAGCCTA GTATTGACTA CATGCGCCAC AAAAGGTTCC GATCCCGGAA CTACCCATCC
TCGTTAAGCA ACGAGACAGA CCGCCTGGTA CACTGGTTGC ACGGGGCGCC CGGCGTCATC
CACACGCTCA TGCAGGCGTA CAAGGTGGTT AAGGAGGAGA AGTACCTG
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | LANCL2 | LanC lantibiotic synthetase component C-like 2; testis-specific adriamycin sensitivity protein; LanC (bacterial lantibiotic synthetase component C)-like 2; G protein-coupled receptor 69B | 572 | e-163 | O |
|
|
| LANCL1 | lanthionine synthetase C-like protein 1; G protein-coupled receptor 69A; LanC (bacterial lantibiotic synthetase component C)-like 1; LanC (bacterial lantibiotic synthetase component) | 305 | 3e-83 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Lancl2 | RIKEN cDNA 1700003F10 | 544 | e-155 | O |
|
|
| Lancl1 | LanC (bacterial lantibiotic synthetase component C)-like; G protein-coupled receptor 69; G protein-coupled receptor 69A; LanC-like protein 1 | 310 | 1e-84 | O |
|
|
| Lancl3 | RIKEN cDNA 6030463G20 | 105 | 4e-23 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens LanC lantibiotic synthetase component C-like 2 (bacterial) (LANCL2), mRNA | 777 | 0.0 | O |
|
|
| Mus musculus RIKEN cDNA 1700003F10 gene (1700003F10Rik), mRNA | 406 | e-111 | O |
|
|
| Mus musculus trans-acting transcription factor 5 (Sp5), mRNA | 40.1 | 0.25 | |
|
|
| UI-E-EJ1-ajx-a-02-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajx-a-02-0-UI 5', mRNA sequence | 40.1 | 0.25 | |
|
|
| AGENCOURT_7896881 NIH_MGC_72 Homo sapiens cDNA clone IMAGE:6159921 5', mRNA sequence | 38.2 | 1.00 | |
|
|
| AU158563 PLACE3 Homo sapiens cDNA clone PLACE3000310 3', mRNA sequence | 38.2 | 1.00 | |
|
|
| Homo sapiens, Similar to epsin 3, clone MGC:1006 IMAGE:3505495, mRNA, complete cds | 38.2 | 1.00 | |
|
|
| tn92a03.x1 NCI_CGAP_Ut2 Homo sapiens cDNA clone IMAGE:2176972 3' similar to gb:X02812_cds1 TRANSFORMING GROWTH FACTOR BETA 1 PRECURSOR (HUMAN);, mRNA sequence | 38.2 | 1.00 | |
|
|
| 602075916F1 NIH_MGC_62 Homo sapiens cDNA clone IMAGE:4243419 5', mRNA sequence | 38.2 | 1.00 | |
|
|
| Homo sapiens TEA domain family member 3 (TEAD3), mRNA | 38.2 | 1.00 |
|
20030531C-001577 : ...........................................................A
---------+---------+---------+---------+---------+---------+ 1
OVRM1_0055_H01.b.ab1 : cgttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxA
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 :
20030531C-001577 : GACGCTGTCCTCGCGGCGCCGCCGGCCGGCCGGAGCCTCCTCCACCGAGGGGACCCCGCA
---------+---------+---------+---------+---------+---------+ 61
OVRM1_0055_H01.b.ab1 : GACGCTGTCCTcgcggcgccgccggccggccggAGCCTCCTCCACCGAGGGGACCCCGCA
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 :
20030531C-001577 : ACCGCGGCGCCCGGGTGGCAGCGATCCCGCCACAGCCTCCCCGAGGGCCCGTCCGGAGCC
---------+---------+---------+---------+---------+---------+ 121
OVRM1_0055_H01.b.ab1 : ACCGCGGCGCCCGGGTGGCAGCGATCCCGCCACAGCCTCCCCGAGGGCCCGTCCGGAgcc
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 :
20030531C-001577 : GGGGCGGGGCGGGGCGCCCTCCGCAACCACGTGTGCCCGCCTCGCAGCGCTGCGCGCCCG
---------+---------+---------+---------+---------+---------+ 181
OVRM1_0055_H01.b.ab1 : ggggcggggcggggcgcccTCCGCAACCACGTGTGCCCGCCTCGCAGCGCTGCGCGCCCG
OVRM1_0054_H06.b.ab1 : cgttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0001_F07.b.ab1 :
20030531C-001577 : CCGCCTTTCCCGGGCTCGCCCGCGGCCCGGCCGGAGCGCCTCGCCGGAGGTTTGTCCCCG
---------+---------+---------+---------+---------+---------+ 241
OVRM1_0055_H01.b.ab1 : CCGCCTTTCCCGGGCTCGCCCGCGGCCCGGCCGGAGCGCCTCGCCGGAGGTTTGTCCCCG
OVRM1_0054_H06.b.ab1 : xxxttTTTCCCGGGCTCGCCCGCGGCCCGGCCGGAGCGCCTCGCCGGAGGTTTGTCCCCG
THY01_0001_F07.b.ab1 :
20030531C-001577 : CTCGCTCGCCGTAGCGCGCGGCCCCGCGGAGCGCAGGGCGCGCGGCCGACATGGGCGAGA
---------+---------+---------+---------+---------+---------+ 301
OVRM1_0055_H01.b.ab1 : CTCGCTCGCCGTAgcgcgcggccccgcggagcgcagggcgcgcggccgACATGGGCGAGA
OVRM1_0054_H06.b.ab1 : CTCGCTCGCCGTAgcgcgcggccccgcggagcgcagggcgcgcggccgACATGGGCGAGA
THY01_0001_F07.b.ab1 :
20030531C-001577 : CCATATCCCGGAGGCTCTGGTTCCAGGGGGACTGGGACGCGGAAATGGAGGAGCGGGCGT
---------+---------+---------+---------+---------+---------+ 361
OVRM1_0055_H01.b.ab1 : CCATATCCCGGAGGCTCTGGTTCCAGGGGGACTGGGACGCGGAAATGGAAGAGCGGGCGT
OVRM1_0054_H06.b.ab1 : CCATATCCCGGAGGCTCTGGTTCCAGGGGGACTGGGACGCGGAAATGGAGGAGCGGGCGT
THY01_0001_F07.b.ab1 :
20030531C-001577 : TCCCCAACCCTTTCCCGGACTACGAGGCCGCGGCCGCCGTGCCGGCGGAGGAGCCGCCAT
---------+---------+---------+---------+---------+---------+ 421
OVRM1_0055_H01.b.ab1 : TCCCCAACCCTTTCCCGGACTACGAGGCCGCGGCCGCCGTGCCGGCGGAGGAGCCGCCAT
OVRM1_0054_H06.b.ab1 : TCCCCAACCCTTTCCCGGACTACGAGGCCGCGGCCGCCGTGCCGGCGGAGGAGCCGCCAT
THY01_0001_F07.b.ab1 :
20030531C-001577 : GTGCTCGCCCTGCGCTCACCCCGGAGGAGCTCGGCCTCCCTTTCCACAGCGACGGGAAGA
---------+---------+---------+---------+---------+---------+ 481
OVRM1_0055_H01.b.ab1 : GTGCTCGCCCTGCGCTCACCCCGGAGGAGCTCGGTCTCCCTTTCCACAGCGACGGGAAGA
OVRM1_0054_H06.b.ab1 : GTGCTCGCCCTGCGCTCACCCCGGAGGAGCTCGGCCTCCCTTTCCACAGCGACGGGAAGA
THY01_0001_F07.b.ab1 : gccxxxxxxxx
20030531C-001577 : TCATTCATAATTTCACAAGGCGGATCCAGAGCAAAATCAAAGATCTTCTACAGCAGATGG
---------+---------+---------+---------+---------+---------+ 541
OVRM1_0055_H01.b.ab1 : TCATTCATAATTTCACAAGGCGGATCCAGAGCAAAATCAAAGATCTACTACAGCAGATGG
OVRM1_0054_H06.b.ab1 : TCATTCATAATTTCACAAGGCGGATCCAGAGCAAAATCAAAGATCTTCTACAGCAGATGG
THY01_0001_F07.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAAGATCTTCTACAGCAGATGG
20030531C-001577 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
---------+---------+---------+---------+---------+---------+ 601
OVRM1_0055_H01.b.ab1 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
OVRM1_0054_H06.b.ab1 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
THY01_0001_F07.b.ab1 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
20030531C-001577 : TAGCCC*TTTTGTACCTTCAATTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
---------+---------+---------+---------+---------+---------+ 660
OVRM1_0055_H01.b.ab1 : TAGCCC*TTTTGTACCTTCAGTTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
OVRM1_0054_H06.b.ab1 : TAGCCC*TTTTGTACCTTCAGTTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
THY01_0001_F07.b.ab1 : TAGCCCTTTTTGTACCTTCAATTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
20030531C-001577 : TCCCTGGATTACGTAAAAAGAACACTTCGGAATCTGAACGGCCGGAGGGTCACTTTCCTC
---------+---------+---------+---------+---------+---------+ 720
OVRM1_0055_H01.b.ab1 : TCCCTGGATTACGTAA*AAGAACACTTCGGGATCTGAACGGCCGGAGGGTC*CTTTTCTC
OVRM1_0054_H06.b.ab1 : TCCCTGGATTACGCAAAAAGAACACTTCGGAATCTGAACGGCCGGAGGGTCACTTTCCTC
THY01_0001_F07.b.ab1 : TCCCTGGATTACGTAAAAAGAACACTTCGGAATCTGAACGGCCGGAGGGTCACTTTCCTC
20030531C-001577 : TGTGGAGATGCCGGGCCCCTGGCCGTCGGAGCTGTGGTGTATCACAAACTCAAAAGTGAT
---------+---------+---------+---------+---------+---------+ 780
OVRM1_0055_H01.b.ab1 : TGTGGACATGCCGGGCCCtgggcgtcggactgtggtgtn
OVRM1_0054_H06.b.ab1 : TGTGGAGATGCCGGGCCCCTGGCCGTCGGAGCTGTGGTGTATCACAAACTCAAAAGTGAT
THY01_0001_F07.b.ab1 : TGTGGAGATGCCGGGCCCCTGGCCGTCGGAGCTGTGGTGTATCACAAACTCAAAAGTGAT
20030531C-001577 : GGCGAGTCCCAGGAATGCATCACAAAACTCCTGCAGCTCCAGAGAACCATCGTCTGCCGC
---------+---------+---------+---------+---------+---------+ 840
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 : GGCGAGTCCCAGGAATGCATCACAAAACTCCTGCAGCTCCAGAGAACCATCGTCTGCCGC
THY01_0001_F07.b.ab1 : GGCGAGTCCCAGGAATGCATCACAAAACTCCTGCAGCTCCAGAGAACCATCGTCTGCCGC
20030531C-001577 : GACTCGGACCTTCCCGATGAGCTGCTTTTCGGCCGCGCGGGCTACCTGTACGCCTTGCTC
---------+---------+---------+---------+---------+---------+ 900
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 : GACTCGGACCTTCCCGATGAGCTGCTTTTCGGCCGCGCGGGCTACCTGTACGCCTTGCTC
THY01_0001_F07.b.ab1 : GACTCGGACCTTCCCGATGAGCTGCTTTTCGGCCGCGCGGGCTACCTGTACGCCTTGCTC
20030531C-001577 : TATGTGAACACGGAGATGGATCCGGGCGCCGTGTGCGAATCAGCCATCAAAGAGGTGGTC
---------+---------+---------+---------+---------+---------+ 960
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 : TATGTGAACACGGAGATGGGTCCGGGCGCCGTGTGCGAATCACCCATCAAA
THY01_0001_F07.b.ab1 : TATGTGAACACGGAGATGGATCCGGGCGCCGTGTGCGAATCAGCCATCAAAGAGGTGGTC
20030531C-001577 : GATGCTATTATTGTTTCGGGCAAGACTTTGTCAAAGGAAGAAAGGAAGGCCGAGCGCTGC
---------+---------+---------+---------+---------+---------+ 1020
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 : GATGCTATTATTGTTTCGGGCAAGACTTTGTCAAAGGAAGAAAGGAAGGCCGAGCGCTGC
20030531C-001577 : CCCCTGTTGTACCAGTGGCACAGGAAGCAGTACGTCGGAGCCGCCCATGGCATGGCTGGG
---------+---------+---------+---------+---------+---------+ 1080
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 : CCCCTGTTGTACCAGTGGCACAGGAAGCAGTACGTCGGAGCCGCCCATGGCATGGCTGGG
20030531C-001577 : ATCTACTACATGCTAATGCAGCCAGCAGCAAAAGTGGACCAAGAAACCTTGACAGAGATG
---------+---------+---------+---------+---------+---------+ 1140
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 : ATCTACTACATGCTAATGCAGCCAGCAGCAAAAGTGGACCAAGAAACCTTGACAGAGATG
20030531C-001577 : GTGAAGCCTAGTATTGACTACATGCGCCACAAAAGGTTCCGATCCCGGAACTACCCATCC
---------+---------+---------+---------+---------+---------+ 1200
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 : GTGAAGCCTAGTATTGACTACATGCGCCACAAAAGGTTCCGATCCCGGAACTACCCATCC
20030531C-001577 : TCGTTAAGCAACGAGACAGACCGCCTGGTACACTGGTTGCACGGGGCGCCCGGCGTCATC
---------+---------+---------+---------+---------+---------+ 1260
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 : TCGTTAAGCAACGAGACAGACCGCCTGGTACACTGGTTGCACGGGGCGCCCGGCGTCATC
20030531C-001577 : CACACGCTCATGCAGGCGTACAAGGTGGTTAAGGAGGAGAAGTACCTG............
---------+---------+---------+---------+---------+---------+ 1308
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 : CACACGCTCATGCAGGCGTACAAGGTGGTTAAGGAGGAGAAGTACCTGacggacgccgtg
20030531C-001577 : ............................................................
---------+---------+---------+---------+---------+---------+ 1308
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 : gagtgcagcgacgtgattttgccagcgggccctgctggccatgggtacggcatctgccac
20030531C-001577 : ............................................................
---------+---------+---------+---------+---------+---------+ 1308
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
THY01_0001_F07.b.ab1 : ggaatgcgggcaacggttactcctct
TOP
TOP