[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20040204C-005337
Length:
1,041
Sequence:
[FASTA format sequence]
CACTCCAGGA GGACACGCGG GCAGCTGGGG CGTGGGATTC CTGCAGAGAC CTCGGTGGAG
GGTCAGAGGC CCGCGCCGAG CCCGTGTCCA CGGGGGTCGC TCCTCCTCCG CTGGAGGGAC
TGACTTACAA TTTGGGTCCA GAGCGCACAG CGCGGGGCTA CGAGGGTGCG CAGTTCCCCG
GGTCCCCCGA GTCCCCGACG CCCGGCGAGG AGATCTGGGT TTTCCAGCGC GCCCCGCAAG
ACGCCTCTGC TCAGGAGCCC GGCGCCGGGG CCCCGCGATG GCCGCGGGCC GCAGCCTCAG
GGAGCTGCTG CCGCGTGGGT GCCGGGGCGC CCCTCCCTAG CGGGGCGCAG CCTGCGCCCG
GTCCCCGCCC GACCAGCGGA ATGGGGGGCG GAGGGTCTGC CCTGAGGGTC TGCGCGGACC
ACCGCGGGGG CATCAACTGG CTCAGCCTGA GCCCCGACGG GCAGCGCCTG CTGACGGGCA
GCGAGGACGG CACCGCCCGG CTCTGGAGCA CCGCGGACGG CCAGTGCTGC GCCCTCCTGC
AAGGACATGA AAGCTACGTG ACCTTCTGCC AGCTGGAGGA CGAAGCTGCC TTCACGTGCA
GCGCTGACTG CACCATCCGG AAGTGGGACG TGCTGACCGG GCAGTGTCTG CAGGTGTTCC
GGGGACACAC ATCCATTGTG AACAGGATCC TGGTCACCAA CAACCAGCTC TTCAGCAGTT
CCTATGACCG GACAGCTCGC GCCTGGAGTG TAGACAAAGG GCAGGTGTCG CGGGAGTTCC
GGGGCCACCG CAACTGTGTG CTGACTCTAG CCTACTCTGC CCCCTGGGAC CTGCCTGGGG
CTCCCTGCGT GGAGGAGGCC GTGGCTGGGG GGCTTCTGGT GACGGGAAGC ACAGACGGCA
CAGCCAAGGT GTGGCAAGTG GCCAGTGGCT GCTGCCACCA GACGCTGCGG GGCCACACGG
GCGCCGTGCT CTGCCTGGTG TTGGACACAC CTGGGCACAC AGCCTTCACC GGCAGCACCG
ACGCCACCAT CCGCGCCTGG G
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | WDR86 | hypothetical protein LOC349136 | 190 | 2e-48 | O |
|
|
| similar to hypothetical protein FLJ25955 | 115 | 4e-26 | O | |
|
|
| FBXW7 | F-box and WD-40 domain protein 7 (archipelago homolog, Drosophila) | 112 | 3e-25 | |
|
|
| FBXW7 | F-box and WD-40 domain protein 7 (archipelago homolog, Drosophila) | 112 | 3e-25 | |
|
|
| TAF5 | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa | 109 | 4e-24 | |
|
|
| WDR5 | WD repeat domain 5 | 100 | 2e-21 | O |
|
|
| PAFAH1B1 | platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa | 100 | 2e-21 | |
|
|
| WDR5 | WD repeat domain 5 | 100 | 2e-21 | O |
|
|
| WDR69 | hypothetical protein FLJ25955 | 98.6 | 6e-21 | O |
|
|
| WDR5B | WD repeat domain 5B | 97.8 | 1e-20 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Fbxw7 | F-box and WD-40 domain protein 7, archipelago homolog (Drosophila) | 112 | 3e-25 | |
|
|
| Taf5 | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor | 109 | 3e-24 | |
|
|
| Pafah1b1 | platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit | 100 | 2e-21 | |
|
|
| Wdr5 | WD repeat domain 5 | 100 | 1e-21 | O |
|
|
| Fbxw11 | F-box and WD-40 domain protein 1B | 97.1 | 2e-20 | |
|
|
| Wdr5b | WD repeat domain 5B | 94.7 | 8e-20 | O |
|
|
| 94.7 | 8e-20 | O | ||
|
|
| Btrc | beta-transducin repeat containing protein | 92.8 | 3e-19 | |
|
|
| Plrg1 | pleiotropic regulator 1, PRL1 homolog (Arabidopsis) | 89.4 | 3e-18 | |
|
|
| Copb2 | coatomer protein complex, subunit beta 2 (beta prime) | 87 | 2e-17 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens hypothetical protein LOC349136 (LOC349136), mRNA | 605 | e-171 | O |
|
|
| Mus musculus cDNA clone IMAGE:6825904, partial cds | 587 | e-166 | |
|
|
| Mus musculus RIKEN cDNA 0610033N12 gene (0610033N12Rik), mRNA | 42.1 | 0.057 | |
|
|
| Mus musculus RIKEN cDNA 9930021D14 gene (9930021D14Rik), mRNA | 42.1 | 0.057 | |
|
|
| Human metalloendopeptidase homolog (PEX) mRNA, complete sequence | 40.1 | 0.23 | |
|
|
| Mus musculus RIKEN cDNA 1700113K14 gene (1700113K14Rik), mRNA | 40.1 | 0.23 | |
|
|
| Bos taurus endothelin converting enzyme 1 (ECE1), mRNA | 40.1 | 0.23 | |
|
|
| UI-E-EJ1-ajz-c-15-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajz-c-15-0-UI 5', mRNA sequence | 38.2 | 0.89 | |
|
|
| Homo sapiens C1q-related factor (CRF), mRNA | 38.2 | 0.89 | |
|
|
| Homo sapiens histone deacetylase 10 (HDAC10), mRNA | 38.2 | 0.89 |
|
20040204C-005337 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0031_F06.b.ab1 : aggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0011_G02.b.ab1 :
20040204C-005337 : ..........................CACTCCAGGAGGACACGCGGGCAGCTGGGGCGTG
---------+---------+---------+---------+---------+---------+ 34
OVR01_0031_F06.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxCACTCCAGGAGGACACGCGGGCAGCTGGGGCGTG
OVR01_0011_G02.b.ab1 :
20040204C-005337 : GGATTCCTGCAGAGACCTCGGTGGAGGGTCAGAGGCCCGCGCCGAGCCCGTGTCCACGGG
---------+---------+---------+---------+---------+---------+ 94
OVR01_0031_F06.b.ab1 : GGATTCCTGCAGAGACCTCGGTGGAGGGTCAGAGGCCCGCGCCGAGCCCGTGTCCACGGG
OVR01_0011_G02.b.ab1 : ncaacaattgaacatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20040204C-005337 : GGTCGCTCCTCCTCCGCTGGAGGGACTGACTTACAATTTGGGTCCAGAGCGCACAGCGCG
---------+---------+---------+---------+---------+---------+ 154
OVR01_0031_F06.b.ab1 : GGTCGCTCCTCCTCCGCTGGAGGGACTGACTTACAATTTGGGTCCAGAGCGCACAGCGCG
OVR01_0011_G02.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaCACAGCGCG
20040204C-005337 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
---------+---------+---------+---------+---------+---------+ 214
OVR01_0031_F06.b.ab1 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
OVR01_0011_G02.b.ab1 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
20040204C-005337 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAGCCCGGCGCCGGGGCCCC
---------+---------+---------+---------+---------+---------+ 274
OVR01_0031_F06.b.ab1 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAgcccggcgccggggcccc
OVR01_0011_G02.b.ab1 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAgcccggcgccggggcccc
20040204C-005337 : GCGATGGCCGCGGGCCGCAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
---------+---------+---------+---------+---------+---------+ 334
OVR01_0031_F06.b.ab1 : gcgatggccgcgggccgcAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
OVR01_0011_G02.b.ab1 : gcgatggccgcgggccgcAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
20040204C-005337 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
---------+---------+---------+---------+---------+---------+ 394
OVR01_0031_F06.b.ab1 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
OVR01_0011_G02.b.ab1 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
20040204C-005337 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
---------+---------+---------+---------+---------+---------+ 454
OVR01_0031_F06.b.ab1 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
OVR01_0011_G02.b.ab1 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
20040204C-005337 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
---------+---------+---------+---------+---------+---------+ 514
OVR01_0031_F06.b.ab1 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
OVR01_0011_G02.b.ab1 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
20040204C-005337 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
---------+---------+---------+---------+---------+---------+ 574
OVR01_0031_F06.b.ab1 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
OVR01_0011_G02.b.ab1 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
20040204C-005337 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
---------+---------+---------+---------+---------+---------+ 634
OVR01_0031_F06.b.ab1 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
OVR01_0011_G02.b.ab1 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
20040204C-005337 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
---------+---------+---------+---------+---------+---------+ 694
OVR01_0031_F06.b.ab1 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
OVR01_0011_G02.b.ab1 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
20040204C-005337 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
---------+---------+---------+---------+---------+---------+ 754
OVR01_0031_F06.b.ab1 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
OVR01_0011_G02.b.ab1 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
20040204C-005337 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
---------+---------+---------+---------+---------+---------+ 814
OVR01_0031_F06.b.ab1 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
OVR01_0011_G02.b.ab1 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
20040204C-005337 : CTCTGCCCCCTG*GGACCTGCCTGGGGCTCCCTGCGTGGAGGAGGCC*GTGGCTGGGGGG
---------+---------+---------+---------+---------+---------+ 872
OVR01_0031_F06.b.ab1 : CTCTGCCCCCTGGGGACCTGCCTGGGGGTCCCTGCGTGGAAGAGGCCCGGGGCTGGGGGG
OVR01_0011_G02.b.ab1 : CTCTGCCCCCTG*GGACCTGCCTGGGGCTCCCTGCGTGGAGGAGGCC*GTGGCTGGGGGG
20040204C-005337 : CTTCTGGTGACGGGAAGCACAGACGGCACAGCCAAGGTGTGGCAAGTGGCCAGTGGCTGC
---------+---------+---------+---------+---------+---------+ 932
OVR01_0031_F06.b.ab1 : Ctttctggtgacgggaagcacagacgggacaaccaaggggggggcaggtgggcagtgggc
OVR01_0011_G02.b.ab1 : CTTCTGGTGACGGGAAGCACAGACGGCACAGCCAAGGTGTGGCAAGTGGCCAGTGGCTGC
20040204C-005337 : TGCCACCAGACGCTGCGGGGCCACACGGGCGCCGTGCTCTGCCTGGTGTTGGACACACCT
---------+---------+---------+---------+---------+---------+ 992
OVR01_0031_F06.b.ab1 : tggtgccaccaaacgctgcgggggccacccgggcgcccgggttttgcctgggggttggac
OVR01_0011_G02.b.ab1 : TGCCACCAGACGCTGCGGGGCCACACGGGCGCCGTGCTCTGCCTGGTGTTGGACACACCT
20040204C-005337 : GGGCACACAGCCTTCACCGGCAGCACCGACGCCACCATCCGCGCCTGGG...........
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 : aaaccttgggcccccaagccctttcccggggagaaccgaaagcccccctttcccccgccc
OVR01_0011_G02.b.ab1 : GGGCACACAGCCTTCACCGGCAGCACCGACGCCACCATCCGCGCCTGGGacttcttgagt
20040204C-005337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 : tgggaacattcctgagaggggggaaccccttgggccggggttttcgggggagccccccag
OVR01_0011_G02.b.ab1 : ggggaggcgctgcgcgtgttccgggagcacaggggctcatcatctgtcctggagctggtg
20040204C-005337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 : gggcttctccctttattttttttttttgggaaagttgggttggagaaaccccgggggacc
OVR01_0011_G02.b.ab1 : aaccggcacgtgtactcgggcaacggcgacagggacggttcaagtgctgggttggcggga
20040204C-005337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 : cggtggggtatttcttctcgggggcggccaaggcccccccccccaaaaaaga
OVR01_0011_G02.b.ab1 : ccggggcgaggggcgtggcgccacgtttcccccgccccccaaaaccccggggtgaagccc
20040204C-005337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1041
OVR01_0031_F06.b.ab1 :
OVR01_0011_G02.b.ab1 : ccccttaaagataccccccgcccggggggccc
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