[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20050322C-004297
Length:
839
Sequence:
[FASTA format sequence]
CTCACTGCTC TTCTGCTCCC TGAAACTCAG CTGCCAGGGG AGCCGGGGCT GCCCTACGAA
GCCGTCCCCT CCATACTGGA CCCCTACAGG GAGCCACGTG TGCCCAGCGG GGGCACCGCC
CCAGCTGATG CCCCAGAGGG GCCACCCATC TCAAGAGGGG CTCCGGGTCC TGCCTGGCCT
CCTCATGGCA CATGAGCCAG AGCCTGAGGC TGATGGGTTA CTGGACCTCA GCTTCCTGAC
GGAGGAGGAA CAGGAAGCCA TTGCTGAGGT CCTGAAGCGA GATGCCCACC TACGGCAGCT
GGAGGAGGGA CGGGTCAGAA AGCTCCGGGC ATCACTGGAA GACCCTGGGC AGCTGAAGAT
CCTAACAGGG GACTGGTTCC AGGAAGCACG CTCCCAGAGG CACCACCACA CCCACCTGGG
TTCTGACCTA GTCCGAGCCT CCATCCGCAG AAAGAAGGGC TCCAGGGGAG ACCAGGCTCG
GGGCAGCAAT GGGGAGGCTG AGGCTGCTGG GAAAGAGACC GAAGAGGCGC TGGAGCCCAG
GCTCCCCATA GACAAGGCCC CCCAAGAGAG TCTCAGCGAG GCTGAGGGAC CTGATTTCCC
CTCACCATAT GTCCCCACTA AGGCATCAGA TAATGAAGAG GAGCCCCCGG CCCAGGAAGC
GCCTGGGCCG GCGGACGTTC AGGTCCCAGC CGCGGAGGAG GCGGACCCGG AGCCAAAGCC
GCCGTCGGGG GCGGAGGAGG AGCCGCAACC CAGGCCTGCT CAGACCCAGG AGGCGTCCGA
AATCCTGGGA GAATGGGGAG GAGGCCCCGG GGCCTGACCC CTCACTGGAC CGTATGCTC
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | SYTL1 | synaptotagmin-like 1 | 230 | 3e-66 | O |
|
|
| SYTL2 | synaptotagmin-like 2 | 90.1 | 2e-18 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Sytl1 | synaptotagmin-like 1 | 229 | 3e-64 | O |
|
|
| 91.3 | 7e-19 | O | ||
|
|
| Exph5 | exophilin 5 | 50.4 | 1e-06 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens mRNA for FLJ00227 protein. | 410 | e-113 | O |
|
|
| Mus musculus synaptotagmin-like 1, mRNA (cDNA clone MGC:7008 IMAGE:3155535), complete cds | 315 | 2e-84 | O |
|
|
| Mus musculus cDNA clone IMAGE:6400665, containing frame-shift errors | 42.1 | 0.038 | |
|
|
| Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 31619 | 40.1 | 0.15 | |
|
|
| Mus musculus cDNA sequence BC039632, mRNA (cDNA clone IMAGE:5124409), partial cds | 40.1 | 0.15 | |
|
|
| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630025L14 product:hypothetical protein, full insert sequence | 40.1 | 0.15 | |
|
|
| Homo sapiens interleukin 9 receptor (IL9R), transcript variant 2, mRNA | 40.1 | 0.15 | |
|
|
| PREDICTED: Homo sapiens similar to interleukin 9 receptor (LOC400481), mRNA | 40.1 | 0.15 | |
|
|
| EST381912 MAGE resequences, MAGK Homo sapiens cDNA, mRNA sequence | 40.1 | 0.15 | |
|
|
| AGENCOURT_36396610 NIH_MGC_281 Homo sapiens cDNA clone IMAGE:7508197 5', mRNA sequence | 38.2 | 0.59 |
|
20050322C-004297 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVR01_0048_B04.b.ab1 : gggggtttttttagcattggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0039_H04.b.ab1 : gagttgtcxxxxxxxxxxxxxxxxxx
20050322C-004297 : .................................CTCACTGCTCTTCTGCTCCCTGAAACT
---------+---------+---------+---------+---------+---------+ 27
LVR01_0048_B04.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCACTGCTCTTCTGCTCCCTGAAACT
LVRM1_0039_H04.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtACTGCTCTTCTGCTCCCTGAAACT
20050322C-004297 : CAGCTGCCAGGGGAGCCGGGGCTGCCCTACGAAGCCGTCCCCTCCATACTGGACCCCTAC
---------+---------+---------+---------+---------+---------+ 87
LVR01_0048_B04.b.ab1 : CAGCTGCCAGGGGAGCCGGGGCTGCCCTACGAAGCCGTCCCCTCCATACTGGACCCCTAC
LVRM1_0039_H04.b.ab1 : CAGCTGCCAGGGGAGCCGGGGCTGCCCTACGAAGCCGTCCCCTCCATACTGGACCCCTAC
20050322C-004297 : AGGGAGCCACGTGTGCCCAGCGGGGGCACCGCCCCAGCTGATGCCCCAGAGGGGCCACCC
---------+---------+---------+---------+---------+---------+ 147
LVR01_0048_B04.b.ab1 : AGGGAGCCACGTGTGCCCAGCGGGGGCACCGCCCCAGCTGATGCCCCAGAGGGGCCACCC
LVRM1_0039_H04.b.ab1 : AGGGAGCCACGTGTGCCCAGCGGGGGCACCGCCCCAGCTGATGCCCCAGAGGGGCCACCC
20050322C-004297 : ATCTCAAGAGGGGCTCCGGGTCCTGCCTGGCCTCCTCATGGCACATGAGCCAGAGCCTGA
---------+---------+---------+---------+---------+---------+ 207
LVR01_0048_B04.b.ab1 : ATCTCAAGAGGGGCTCCGGGTCCTGCCTGGCCTCCTCATGGCACATGAGCCAGAGCCTGA
LVRM1_0039_H04.b.ab1 : ATCTCAAGAGGGGCTCCGGGTCCTGCCTGGCCTCCTCATGGCACATGAGCCAGAGCCTGA
20050322C-004297 : GGCTGATGGGTTACTGGACCTCAGCTTCCTGACGGAGGAGGAACAGGAAGCCATTGCTGA
---------+---------+---------+---------+---------+---------+ 267
LVR01_0048_B04.b.ab1 : GGCTGATGGGTTACTGGACCTCAGCTTCCTGACGGAGGAGGAACAGGAAGCCATTGCTGA
LVRM1_0039_H04.b.ab1 : GGCTGATGGGTTACTGGACCTCAGCTTCCTGACGGAGGAGGAACAGGAAGCCATTGCTGA
20050322C-004297 : GGTCCTGAAGCGAGATGCCCACCTACGGCAGCTGGAGGAGGGACGGGTCAGAAAGCTCCG
---------+---------+---------+---------+---------+---------+ 327
LVR01_0048_B04.b.ab1 : GGTCCTGAAGCGAGATGCCCACCTACGGCAGCTGGAGGAGGGACGGGTCAGAAAGCTCCG
LVRM1_0039_H04.b.ab1 : GGTCCTGAAGCGAGATGCCCACCTACGGCAGCTGGAGGAGGGACGGGTCAGAAAGCTCCG
20050322C-004297 : GGCATCACTGGAAGACCCTGGGCAGCTGAAGATCCTAACAGGGGACTGGTTCCAGGAAGC
---------+---------+---------+---------+---------+---------+ 387
LVR01_0048_B04.b.ab1 : GGCATCACTGGAAGACCCTGGGCAGCTGAAGATCCTAACAGGGGACTGGTTCCAGGAAGC
LVRM1_0039_H04.b.ab1 : GGCATCACTGGAAGACCCTGGGCAGCTGAAGATCCTAACAGGGGACTGGTTCCAGGAAGC
20050322C-004297 : ACGCTCCCAGAGGCACCACCACACCCACCTGGGTTCTGACCTAGTCCGAGCCTCCATCCG
---------+---------+---------+---------+---------+---------+ 447
LVR01_0048_B04.b.ab1 : ACGCTCCCAGAGGCACCACCACACCCACCTGGGTTCTGACCTAGTCCGAGCCTCCATCCG
LVRM1_0039_H04.b.ab1 : ACGCTCCCAGAGGCACCACCACACCCACCTGGGTTCTGACCTAGTCCGAGCCTCCATCCG
20050322C-004297 : CAGAAAGAAGGGCTCCAGGGGAGACCAGGCTCGGGGCAGCAATGGGGAGGCTGAGGCTGC
---------+---------+---------+---------+---------+---------+ 507
LVR01_0048_B04.b.ab1 : CAGAAAGAAGGGCTCCAGGGGAGACCAGGCTCGGGGCAGCAATGGGGAGGCTGAGGCTGC
LVRM1_0039_H04.b.ab1 : CAGAAAGAAGGGCTCCAGGGGAGACCAGGCTCGGGGCAGCAATGGGGAGGCTGAGGCTGC
20050322C-004297 : TGGGAAAGAGACCGAAGAGGCGCTGGAGCCCAGGCTCCCCATAGACAAGGCCCCCCAAGA
---------+---------+---------+---------+---------+---------+ 567
LVR01_0048_B04.b.ab1 : TGGGAAAGAGACCGAAGAGGCGCTGGAGCCCAGGCTCCCCATAGACAAGGCCCCCCAAGA
LVRM1_0039_H04.b.ab1 : TGGGAAAGAGACCGAAGAGGCGCTGGAGCCCAGGCTCCCCATAGACAAGGCCCCCCAAGA
20050322C-004297 : GAGTCTCAGCGAGGCTGAGGGACCTGATTTCCCCTCACCATATGTCCCCACTAAGGCATC
---------+---------+---------+---------+---------+---------+ 627
LVR01_0048_B04.b.ab1 : GAGTCTCAGCGAGGCTGAGGGACCTGATTTCCCCTCACCATATGTCCCCACTAAGGCATC
LVRM1_0039_H04.b.ab1 : GAGTCTCAGCGAGGCTGAGGGACCTGATTTCCCCTCACCATATGTCCCCACTAAGGCATC
20050322C-004297 : AGATAATGAAGAGGAGCCCCCGGCCCAGGAAGCGCCTGGGCCGGCGGACGTTCAGGTCCC
---------+---------+---------+---------+---------+---------+ 687
LVR01_0048_B04.b.ab1 : AGATAATGAAGAGGAGCCCCCGGCCCAGGAAGCGCCTGGGCCGGCGGACGTTCAGGTCCC
LVRM1_0039_H04.b.ab1 : AGATAATGAAGAGGAGCCCCCGGCCCAGGTAGCGCCTGGGCCGGCGGACGTTCAAGTCCC
20050322C-004297 : AGCCGCGGAGGAGGCGGACCCGGAGCCAAAGCCGCCGTCGGGGGCGGAGGAGGAGCCGCA
---------+---------+---------+---------+---------+---------+ 747
LVR01_0048_B04.b.ab1 : AGCCGCGGAGGAGGCGGACCCGGAGCCAAAGCCGCCGTCGGGGGCGGAGGAGGAGCCGCA
LVRM1_0039_H04.b.ab1 : AGCCGCGGAGGAGGCGGACCCGGAGCC*AAGCCGCCGTCGGGGGCGGAG
20050322C-004297 : ACCCAGGCCTGCTCAGACCCAGGAGGCGTCCGAAATCCTGGGAGAATGGGGAGGAGGCCC
---------+---------+---------+---------+---------+---------+ 807
LVR01_0048_B04.b.ab1 : ACCCAGGCCTGCTCAGACCCAGGAGGCGTCCGAAATCCTGGGAGAATGGGGAGGAGGCCC
LVRM1_0039_H04.b.ab1 :
20050322C-004297 : CGGGGCCTGACCCCTCACTGGACCGTATGCTC............................
---------+---------+---------+---------+---------+---------+ 839
LVR01_0048_B04.b.ab1 : CGGGGCCTGACCCCTCACTGGACCGTATGCTCagcaccagctccctcatggtccagcctc
LVRM1_0039_H04.b.ab1 :
20050322C-004297 : ............................................................
---------+---------+---------+---------+---------+---------+ 839
LVR01_0048_B04.b.ab1 : aactcctccacgcttgagcggcagccagatgagccctgtcgggggaagcggaaggcggcg
LVRM1_0039_H04.b.ab1 :
20050322C-004297 : ............................................................
---------+---------+---------+---------+---------+---------+ 839
LVR01_0048_B04.b.ab1 : gcagtgcaggtgcgccgcctcccttgcacttcgccgctgccctacgagccctggcgcccg
LVRM1_0039_H04.b.ab1 :
20050322C-004297 : ............................................................
---------+---------+---------+---------+---------+---------+ 839
LVR01_0048_B04.b.ab1 : ccgaaccttcccggtgcccctgaatcccattgcccaggggcctggcccgccccccccccc
LVRM1_0039_H04.b.ab1 :
20050322C-004297 : ............................................................
---------+---------+---------+---------+---------+---------+ 839
LVR01_0048_B04.b.ab1 : cccccccccgccttcaaaaccc
LVRM1_0039_H04.b.ab1 :
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