[Help]

[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-019563

Length: 1,173

Sequence:  [FASTA format sequence]
TTTXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXGGC TCGGGGGCCG GGGCGCGGCT GCTGCAGCTC
TTGCAAGAGC AGAGCCGAGC CGAGCGCCCG CCGCTGCCCG CCGCCCGCTG CGTGCGCCTC
CGCGCCATGG CTGGCCTCAA CTCCCTGGAG GCGGTGAAAC GCAAGATCCA GGTCCTGCAG
CAGCAGGCGG ACGAGGCAGA AGATCGCGCG CACGGCCTGC ACCGGGAGCT GGACGGCGAG
CGCGAGCGGC GTGAGAAAGC CGAAAGGGAA GTAGCACCTC TCACTCGCCG CATCCAACTC
GCTGATGAGG ACTTGGATTT GGCTCATGAA CGACTGGCCA CCCGCTTGCC TATTTTTAAG
GATGAGAGAC CCGCTGAACA TGTAAATCCA TATAGCACTG ACCGCGATAA TAAAAATGGC
CACTCCTTTC TGTTTACTAT TATGTCCTTC TCCGTATTTT CCACTCTTGC TGTACCAATC
AACTTTTCTT ATTTAACCCA ACAGCTTAAT CTTTGATTAA TCTTCGATTG CTATTAACCA
TTTCCTGTGC CTATAACATC TCCTAGATAC ACACCCAAGC ATACAAAACT TCCACTTGAT
CTCACCTTCT CTATTCCGTT TTTTAATGTT TCAACCCCAT TCATCACTTT ATTGTTACAT
GCCACTCTCA TGACCGATTA ATTGCACCTA CGTTAAATCT CACTTAATGG AATCTTATTT
AATCATTCTT GTACTTAATA TATTCTTACT CCGATAAACT ATACGTCTCT TATTTTCACT
CCATAATTAA TTTCTTTATT TTTCTTATTA TCTCTTCTCC TCTGTTTTCC TTCACTCTCT
TGATCTCGCT ACAACAATCC CCTACATATC AATCATTGAT CACCAATTTA TATTTATCTC
ATTTAACTCC TATACTTCTT CTCTCTCTTC TCTCTACTCA CCATTATCCT TTCTCTTCTT
CTTCTTTTCT TCCACTCCTC CCTACTCTCT TCCCCTTTCA TACTAACCAA TATCTACAAA
GCCTTGTATA AATTGTATTC ATAAATCCAC CCTCTTGATT TTTCATCCAC GATCCCTACC
CTTCTCTTCT ACACCCTATC CCCGTCCCCT ATTATTATAT TTCTTATTGC TTTTCTATGT
TTGTTTTCCT AATTCGATAT TATTATATTA TTTAACGTAC TTTTTACTAT AATATTTTTT
TCCATTAATT CTAGAGTGGT CGTTTCTCCC TCAATCACTA AGATACACTG TAAATATTTA
TTCACCCCCT CAATTTTGTT CAATTATAGT TATGTTTCCC TCCATCATCT T

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

---

Assembly Overview:      TOP

Change score limit to  

---

BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		TPM4	tropomyosin 4	95.5	8e-20	O
		TPM3	tropomyosin 3	84.3	2e-16	O
		TPM1	tropomyosin 1 (alpha)	76.6	4e-14	O
		LOC644330	similar to tropomyosin 3 isoform 2	56.6	4e-08	O
		LOC651348	similar to tropomyosin 3, gamma isoform 2	56.6	4e-08	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Tpm4	tropomyosin 4	90.9	2e-18	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC484695	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC484695	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC484695	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC480137	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC480137	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC480137	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC480137	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC480137	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC480137	similar to tropomyosin 3 isoform 2	84.3	2e-16	O
		LOC480137	similar to tropomyosin 3 isoform 2	84.3	2e-16	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		LOC512435	similar to tropomyosin 3 isoform 2	82.4	6e-16	O
		LOC512435	similar to tropomyosin 3 isoform 2	82.4	6e-16	O
		LOC512435	similar to tropomyosin 3 isoform 2	82.4	6e-16	O
		LOC512435	similar to tropomyosin 3 isoform 2	82.4	6e-16	O
		LOC512435	similar to tropomyosin 3 isoform 2	82.4	6e-16	O
		LOC512435	similar to tropomyosin 3 isoform 2	82.4	6e-16	O
		LOC540799	similar to tropomyosin 3 isoform 2	68.9	7e-12	O
		LOC619069	similar to Tropomyosin alpha 4 chain (Tropomyosin 4) (TM-4)	67.8	2e-11	O
		LOC540799	similar to tropomyosin 3 isoform 2	63.2	4e-10	O
		LOC512435	similar to tropomyosin 3 isoform 2	57.4	2e-08	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		TPM4	tropomyosin 4	95.5	2e-21	O
		TPM3	tropomyosin 3	84.3	5e-18	O