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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-022570

Length: 748

Sequence:  [FASTA format sequence]
CXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXCTCGA CACCGACGCC GCTGCCGCCG CAGGCCCCTC CACGCCCACA CCCCCTACCC
ACTGCCCAGC CATGGAGGCC ATCAAGAAGA AGATGCAGAT GCTGAAGCTG GACAAGGAGA
ACGCCATCGA CCGGGCCGAG CAGGCGGAGT CGGATAAGAA AGCTGCTGAG GAGAAGTGCA
AGCAGGTGGA GGAGGAGCTG ACGCACCTCC AGAAGAAGCT GAAGGGGACA GAGGATGAGC
TGGACAAATA CTTCCAGAAC CTGAAGGACG CGCAGGAAAA GCTGGAGTTG AGCAAGAAGA
AAGCCTCCGA CGCCGAAGGG GATGTAGCAG CTCTTAATCG GCGCATCCAA CTCGTTGAGG
AGGAGTTGGA CAGGGCTCAG GAACGACTGG CCACAGCCCT GCAGAAGCTT GAGGAGGGAG
AAAGGGGTGG GGATGAGATC GAGAGATGAA TGAATGGGAT GGAAAAGGCG GGCCATTAAA
AAGAAGAAAA GATTGGGGTT CTAGAAAAGC TGTTGAAGGA AGTCAGGCTC GTGGCTATGG
AGGCGAACCG GAATACGGGG ATAAATAATG GTATGTGGGT GATCGGGAGG GGTAGAGTAT
GTGGGAATAA AAACTGTGGG AAGGCGTGGC ATTATGGTTT GGGTGCCTGT ATTTGTGGTC
GTATGGGGGT GGTTTATGTG TATATTGTGG TTGGTGTAAG GAAGGGAAGT ACGTATTTTG
ATTTGATGTT AGTGGAATGT CATGGTGGTC CTGAGACGGG TCGCACGGG

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM2	tropomyosin 2 (beta)	182	3e-46	O
		TPM2	tropomyosin 2 (beta)	182	3e-46	O
		TPM1	tropomyosin 1 (alpha)	149	2e-36	O
		TPM1	tropomyosin 1 (alpha)	149	2e-36	O
		TPM3	tropomyosin 3	113	2e-25	O
		TPM4	tropomyosin 4	78.2	7e-15	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Tpm1	tropomyosin 1, alpha	189	3e-48	O
		Tpm2	tropomyosin 2, beta	183	1e-46	O
		Tpm3	tropomyosin 3, gamma	182	4e-46	O
		Tpm4	tropomyosin 4	69.7	3e-12	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC609879	similar to tropomyosin 1 (alpha)	214	9e-56	O
		LOC609879	similar to tropomyosin 1 (alpha)	214	9e-56	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O
		TPM1	tropomyosin 1 (alpha)	189	3e-48	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		LOC535277	similar to tropomyosin 4	211	6e-55	O
		LOC535277	similar to tropomyosin 4	190	9e-49	O
		TPM1	tropomyosin 1 (alpha)	186	1e-47	O
		TPM3	tropomyosin 3	183	1e-46	O
		TPM2	tropomyosin 2	183	1e-46	O
		LOC535277	similar to tropomyosin 4	108	4e-24	O
		LOC512435	similar to tropomyosin 3 isoform 2	68.9	4e-12	O
		LOC512435	similar to tropomyosin 3 isoform 2	68.9	4e-12	O
		LOC512435	similar to tropomyosin 3 isoform 2	68.9	4e-12	O
		LOC512435	similar to tropomyosin 3 isoform 2	68.9	4e-12	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		TPM4	tropomyosin 4	78.2	2e-16	O
		TPM3	tropomyosin 3	70.5	4e-14	O