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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-022886

Length: 751

Sequence [FASTA format sequence]
TTGAATXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXTTT
TGTGCTGGGG TTGGGCGTTC TCTGGTCCAT TAAATTTAGG AAATGCCTCC TACTTTATTC
TCTCTTAAAG ACTTACAAGG CACACACGCT TATCAGTACT TTGAGAAGTC CATGGTTAAG
AAACCTGTTG AACAGTGTTT AATGAAGCAT TTCTCAAATA TAGGTGAATA TACAATTTAA
GGCATTTTTT ATTAATTTCG TGGACTGCCA GTCGTTTTTC GGGGAAGACT TCTGAGGAGC
ATCATTTGGG AAAGGCTTCT GCTCCATCTT TGGGAGGTGA CTGAGTCATT ACGTAAGGAA
ACTCCTCATT CTTCCTGTGC TGGCTGGGAC ACACCCTCTG GGTGGCACAC CCCTCGCCGC
GTCCAACCCA GCCCACAGAC TCGTGGGAAG AAAGCCAGAG CCCAAGCCTT TCCTCCGAGG
AGTGGATGCA GCCCTTCCTA GTGCCAGCCA CCCCTGGAAG AGAAGCTGAA ACCTTCGAGC
TTTGTGCCCC TTCACGACCT GGGAACCTGC TGAGCTCATG GACACGCATC ACATCCCCAA
AGACAACCAA GTGGCTCATC CCCAGGACCC GCACCACCCG CCAGAGAAGC CTGTCATTCA
CTGCCACAAA TGTGGGGAGC CATGCAAGGG CGAAGTGCTT CGGGTCCAGA CCAAACATTT
CCACATCANA TGTTTCACCT GCAAAGATTG CGCTGGCTGT GGACGGGATA TCCAGAACGC
ACAGGCGCTG CTGGCGCTGG AAAGCAGTGG CTTC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinABLIM1actin binding LIM protein 11231e-28O
Contig/Assembly ProteinABLIM1actin binding LIM protein 11231e-28O
Contig/Assembly ProteinABLIM1actin binding LIM protein 11101e-24O
Contig/Assembly ProteinABLIM3actin binding LIM protein family, member 365.16e-11O
Contig/Assembly ProteinABLIM2actin binding LIM protein family, member 259.33e-09O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAblim1actin-binding LIM protein 11071e-23O
Contig/Assembly ProteinAblim2actin-binding LIM protein 266.23e-11O
Contig/Assembly ProteinAblim3actin binding LIM protein family, member 363.23e-10O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC477828similar to actin-binding LIM protein 1 isoform s1084e-24O
Contig/Assembly ProteinLOC477828similar to actin-binding LIM protein 1 isoform s1084e-24O
Contig/Assembly ProteinLOC477828similar to actin-binding LIM protein 1 isoform s1084e-24O
Contig/Assembly ProteinLOC610389similar to Actin-binding LIM protein 2 (Actin-binding LIM protein family member 2) (abLIM2)66.62e-11
Contig/Assembly ProteinLOC612309similar to Actin-binding LIM protein 3 (Actin-binding LIM protein family member 3) (abLIM3)65.17e-11O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC504968similar to actin-binding LIM protein 11092e-24O
Contig/Assembly ProteinLOC504968similar to actin-binding LIM protein 11092e-24O
Contig/Assembly ProteinLOC521767similar to Actin-binding LIM protein 3 (Actin-binding LIM protein family member 3) (abLIM3)63.52e-10O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Member: 1      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LVRM10078E05LVRM1_0078_E05.bBP139543 AK233079