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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-000579

Length: 1,157

Sequence:  [FASTA format sequence]
GGGAAGTCGT CCGAGCTGAG GCTGTGGCCG CCACAGCCGA TCTGGACAGC AATCAGCTCC
GGCTGGCAGC CAGTATGGCA GGGCGTGAGA CGCTGGAGGA ACTGGTGCGA CTTCAGGGAG
AGCGCGTGCG GGGCCTTAAG CAGCAGAAGG CCAGCACTGA GCAGATCGAG GAGGAGGTGG
CAAAACTACT GAAACTGAAG GCACAGCTCG GCCCTGATGA AGGGAAACAT AAGTTTGTGC
TCAAAACTCC CAAGGGCACG AGAGACTACA GTCCCCGGCA GATGGCCGTT CGGGAGAAGG
TGTTTGACGT GATCATCGGC TGCTTCAAGC GCCACGGTGC GGAAGTGATC GACACTCCTG
TGTTTGAACT GAAGGAAACA CTGACTGGAA AGTACGGGGA AGACTCTAAG CTTATCTATG
ACCTGAAGGA CCAGGGTGGC GAGCTGCTGT CCCTCCGCTA TGACCTCACT GTTCCTTTTG
CGCGATACTT GGCAATGAAT AAACTGACCA ATATTAAACG CTACCACATA GCCAAAGTGT
ATCGGCGGGA TAACCCAGCA ATGACCAGAG GCCGGTATCG GGAATTCTAC CAGTGTGACT
TTGACATTGC CGGGCAGTTT GACCCCATGA TTCCCGATGC GGAGTGCCTG AAGATCATGT
GTGAGATCCT GAGTTCACTC CAGATAGGCG ATTTTCTGGT CAAGGTGAAT GATCGGCGCA
TCCTGGATGG GCTGTTTGCC ATCTGCGGTG TTCCTGACAC CAAGTTCCGC ACCATCTGCT
CCTCGGTGGA CAAGCTGGAC AAGATGTCCT GGGAAGAAGT AAAGAATGAG ATGGTGGGAG
AGAAGGGCCT GGCACCCGAG GTGGCCGACC GCATTGGGGA CTACGTCCAA CAGCACGGCG
GGGTATCCCT GGTGGAACAG CTACTCCAGG ATCCCTAACT GTCCCAAAAC AAACAGGGCC
TTGGAGGGGC TGGGAGACCT GAAGCTGCTA TTTGAATACC TGACCCTGTT TTGCGTCCCT
GACAGATCTC CTTCAACTGG ACCCTGCTCG AAGGCTGGAC TACTATACCG GGGTGATCAA
TGAGGGCGGG CTGCTGCAAC CCCCTTGCCA AGCTGGAAAA AAACCCCTGG GTGGGGGCAA
TGTGGCCCCT GGAGGGC

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		HARS	histidyl-tRNA synthetase, cytoplasmic [Homo sapiens].	559	e-168	O
		HARS2	probable histidyl-tRNA synthetase, mitochondrial precursor [Homo sapiens].	415	e-124	O
		EIF2AK4	eukaryotic translation initiation factor 2-alpha kinase 4 [Homo sapiens].	84.7	1e-16

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Hars	histidyl-tRNA synthetase, cytoplasmic [Mus musculus].	559	e-168	O
		Hars2	probable histidyl-tRNA synthetase, mitochondrial precursor [Mus musculus].	395	e-118	O
		Eif2ak4	eukaryotic translation initiation factor 2-alpha kinase 4 isoform 2 [Mus musculus].	82.8	5e-16
		Eif2ak4	eukaryotic translation initiation factor 2-alpha kinase 4 isoform 1 [Mus musculus].	82.8	5e-16

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC478034	PREDICTED: similar to Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) isoform 1 [Canis familiaris].	567	e-171	O
		LOC611601	PREDICTED: similar to Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) [Canis familiaris].	456	e-128	O
		LOC478035	PREDICTED: similar to Histidyl-tRNA synthetase homolog (Histidine--tRNA ligase homolog) (HisRS) [Canis familiaris].	405	e-118	O
		LOC478034	PREDICTED: similar to Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) isoform 3 [Canis familiaris].	360	e-108	O
		LOC475406	PREDICTED: similar to Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) [Canis familiaris].	207	8e-63	O
		LOC478257	PREDICTED: similar to Eukaryotic translation initiation factor 2-alpha kinase 4 (GCN2-like protein) [Canis familiaris].	92.8	5e-19

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		HARS	histidyl-tRNA synthetase, cytoplasmic [Bos taurus].	570	e-172	O
		HARS2	probable histidyl-tRNA synthetase, mitochondrial precursor [Bos taurus].	417	e-123	O
		EIF2AK4	PREDICTED: Gcn2-like [Bos taurus].	87.4	2e-17
		EIF2AK4	PREDICTED: Gcn2-like [Bos taurus].	85.1	1e-16

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		LOC100518652	PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Sus scrofa].	592	e-179	O
		LOC100628024	PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Sus scrofa].	592	e-179	O
		LOC100620334	PREDICTED: probable histidyl-tRNA synthetase, mitochondrial-like [Sus scrofa].	416	e-125	O
		LOC100521256	PREDICTED: probable histidyl-tRNA synthetase, mitochondrial-like [Sus scrofa].	414	e-124	O