Assembly Overview:
TOP
BLAST on RefSeq (Human):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | AARS | alanyl-tRNA synthetase, cytoplasmic [Homo sapiens]. | 652 | 0.0 | |
 |
 | AARS2 | alanyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]. | 202 | 4e-52 | |
BLAST on RefSeq (Mouse):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | Aars | alanyl-tRNA synthetase, cytoplasmic [Mus musculus]. | 652 | 0.0 | |
 |
 | Aars2 | alanyl-tRNA synthetase, mitochondrial precursor [Mus musculus]. | 204 | 7e-53 | |
BLAST on RefSeq (Dog):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | LOC479656 | PREDICTED: similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) isoform 1 [Canis familiaris]. | 657 | 0.0 | |
 |
 | LOC479656 | PREDICTED: similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) isoform 3 [Canis familiaris]. | 657 | 0.0 | |
 |
 | LOC474920 | PREDICTED: similar to alanyl-tRNA synthetase like [Canis familiaris]. | 198 | 8e-51 | |
BLAST on RefSeq (Cattle):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | AARS | alanyl-tRNA synthetase, cytoplasmic [Bos taurus]. | 658 | 0.0 | |
 |
 | AARS2 | probable alanyl-tRNA synthetase, mitochondrial [Bos taurus]. | 201 | 1e-51 | |
 |
 | LOC100337465 | PREDICTED: alanyl-tRNA synthetase 2, mitochondrial-like [Bos taurus]. | 191 | 9e-49 | |
BLAST on RefSeq (Pig):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | AARS | PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Sus scrofa]. | 290 | 9e-79 | |
 |
 | AARS2 | PREDICTED: alanyl-tRNA synthetase, mitochondrial [Sus scrofa]. | 204 | 7e-53 | |
 |
 | LOC100524564 | PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]. | 125 | 5e-29 | O |
Alignment:
TOP
20110601C-000681 : ...........................................TTGATGAGCCCCGACGG
---------+---------+---------+---------+---------+---------+ 17
KDN01_0007_C06.b : nnccctttnnnnnnncctgcgttgtgctcggagtcggctgtttTTGATGAGCCCCGACGG
BFLT1_0004_C03.b : nggactcgttagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0050_C06.b :
SMG01_0016_G10.b :
20110601C-000681 : AGGCCTGTCATGAGCAACCACACAGCCACCCATATCCTGAACTTTGCCCTGCGCTCTGTG
---------+---------+---------+---------+---------+---------+ 77
KDN01_0007_C06.b : AGGCCTGTCATGAGCAACCACACAGCCACCCATATCCTGAACTTTGCCCTGCGCTCTGTG
BFLT1_0004_C03.b : xxxxxxxxxxxxxxxxxxtACACAGCCACCCATATCCTGAACTTTGCCCTGCGCTCTGTG
ADR01_0050_C06.b :
SMG01_0016_G10.b :
20110601C-000681 : CTTGGAGAGGCTGACCAGAGAGGCTCCCTGGTTGCTCCTGACCGCCTTCGGTTTGACTTC
---------+---------+---------+---------+---------+---------+ 137
KDN01_0007_C06.b : CTTGGAGAGGCTGACCAGAGAGGCTCCCTGGTTGCTCCTGACCGCCTTCGGTTTGACTTC
BFLT1_0004_C03.b : CTTGGAGAGGCTGACCAGAGAGGCTCCCTGGTTGCTCCTGACCGCCTTCGGTTTGACTTC
ADR01_0050_C06.b : nn
SMG01_0016_G10.b :
20110601C-000681 : ACTGCCAAGGGAGCCATGTCTACCCAGCAGATTAAGAAGGCCGAGGAGCTGGCTAATGAG
---------+---------+---------+---------+---------+---------+ 197
KDN01_0007_C06.b : ACTGCCAAGGGAGCCATGTCTACCCAGCAGATTAAGAAGGCCGAGGAGCTGGCTAATGAG
BFLT1_0004_C03.b : ACTGCCAAGGGAGCCATGTCTACCCAGCAGATTAAGAAGGCCGAGGAGCTGGCTAATGAG
ADR01_0050_C06.b : nnttagatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAG
SMG01_0016_G10.b :
20110601C-000681 : ATGATAGAGGCAGCCAAGCCCGTCTATGCCCAGAATTGTCCTCTGGCAGCAGCCAAAGCC
---------+---------+---------+---------+---------+---------+ 257
KDN01_0007_C06.b : ATGATAGAGGCAGCCAAGCCCGTCTATGCCCAGAATTGTCCTCTGGCAGCAGCCAAAGCC
BFLT1_0004_C03.b : ATGATAGAGGCAGCCAAGCCCGTCTATGCCCAGAATTGTCCTCTGGCAGCAGCCAAAGCC
ADR01_0050_C06.b : ATGATAGAGGCAGCCAAGCCCGTCTATGCCCAGAATTGTCCTCTGGCGGCAGCCAAAGCC
SMG01_0016_G10.b :
20110601C-000681 : ATCCAGGGCCTGCGGGCTGTGTTTGACGAGACCTACCCCGACCCTGTGCGAGTCGTCTCC
---------+---------+---------+---------+---------+---------+ 317
KDN01_0007_C06.b : ATCCAGGGCCTGCGGGCTGTGTTTGGCGAGACCTACCCCGACCCTGTGCGAGTCGTCTCC
BFLT1_0004_C03.b : ATCCAGGGCCTGCGGGCTGTGTTTGACGAGACCTACCCCGACCCTGTGCGAGTCGTCTCC
ADR01_0050_C06.b : ATCCAGGGCCTGCGGGCTGTGTTTGACGAGACCTACCCCGACCCTGTGCGAGTCGTCTCC
SMG01_0016_G10.b :
20110601C-000681 : ATTGGGGTCCCGGTGTCCGAGCTGCTGGATGACCCCTCCGGTCCCGCTGGCTCACTCACT
---------+---------+---------+---------+---------+---------+ 377
KDN01_0007_C06.b : ATTGGGGTCCCGGTGTCCGAGCTGCTGGATGACCCCTCCGGTCCCGCTGGCTCACTCACT
BFLT1_0004_C03.b : ATTGGGGTCCCGGTGTCCGAGCTGCTGGATGACCCCTCCGGTCCCGCTGGCTCACTCACT
ADR01_0050_C06.b : ATTGGGGTCCCGGTGTCCGAGCTGCTGGATGACCCCTCCGGTCCCGCTGGCTCACTCACT
SMG01_0016_G10.b : nnggggtgatat
20110601C-000681 : TCTGTTGAGTTCTGTGGGGGAACGCATCTGCAGAATTCGAGTCATGCGGGAGCCTTTGTG
---------+---------+---------+---------+---------+---------+ 437
KDN01_0007_C06.b : TCTGTTGAGTTCTGTGGGGGAACGCATCTGCAGAATTCGAGTCATGCGGGAGCCTTTGTG
BFLT1_0004_C03.b : TCTGTTGAGTTCTGTGGGGGAACGCATCTGCAGAATTCGAGTCATGCGGGAGCCTTTGTG
ADR01_0050_C06.b : TCTGTTGAGTTCTGTGGGGGAACGCATCTGCAGAATTCGAGTCATGCGGGAGCCTTTGTG
SMG01_0016_G10.b : atnngggagtatagcagcggnaccggntccggattctcgagcacggttggcctggTTGTG
20110601C-000681 : ATTGTGAGTGAAGAAGCTATTGCCAAGGGCATCCGGCGGATTGTTGCTGTCACCGGTGCT
---------+---------+---------+---------+---------+---------+ 497
KDN01_0007_C06.b : ATTGTGAGTGAAGAAGCTATTGCCAAGGGCATCCGGCGGATTGTTGCTGTCACCGGTGCT
BFLT1_0004_C03.b : ATTGTGAGTGAAGAAGCTATTGCCAAGGGCATCCGGCGGATTGTTGCTGTCACCGGTGCT
ADR01_0050_C06.b : ATTGTGAGTGAAGAAGCTATTGCCAAGGGCATCCGGCGGATTGTTGCTGTCACCGGTGCT
SMG01_0016_G10.b : ATTGTGAGTGAAGAAGCTATTGCCAAGGGCATCCGGCGGATTGTTGCTGTCACTGGTGCT
20110601C-000681 : GAAGCCCAGAAGGCCCTCAGGAAAGCGGACAGCCTGATGAAATCTCTGTGTGCCATGGAG
---------+---------+---------+---------+---------+---------+ 557
KDN01_0007_C06.b : GAAGCCCAGAAGGCCCTCAGGAAAGCGGACAGCCTGATGAAATCTCTGTGTGCCATGGAG
BFLT1_0004_C03.b : GAAGCCCAGAAGGCCCTCAGGAAAGCGGACAGCCTGATGAAATCTCTGTGTGCCATGGAG
ADR01_0050_C06.b : GAAGCCCAGAAGGCCCTCAGGAAAGCGGACAGCCTGATGAAATCTCTGTGTGCCATGGAG
SMG01_0016_G10.b : GAAGCCCAGAAGGCCCTCAGGAAAGCGGACAGCCTGATGAAATCTCTGTGTGCCATGGAG
20110601C-000681 : GCCAAAGTGAAGGCCCAGACTGCGCCCAATAAGGACGTGCAGAGGGAGATTGCTGACCTT
---------+---------+---------+---------+---------+---------+ 617
KDN01_0007_C06.b : GCCAAAGTGAAGGCCCAGACTGCGCCCAATAAGGACGTGCAGAGGGAGATTGCTGACCTT
BFLT1_0004_C03.b : GCCAAAGTGAAGGCCCAGACTGCACCCAATAAGGACGTGCAGAGGGAGATTGCTGACCTT
ADR01_0050_C06.b : GCCAAAGTGAAGGCCCAGACTGCGCCCAATAAGGACGTGCAGAGGGAGATTGCTGACCTT
SMG01_0016_G10.b : GCCAAAGTGAAGGCCCAGACTGCGCCCAATAAGGACGTGCAGAGGGAGATTGCTGACCTT
20110601C-000681 : GGCGAGGCCCTGGCCACCGCAGTCATCCCCCAGTGGCAGAAGGACGAATTCCGGGAGAAT
---------+---------+---------+---------+---------+---------+ 677
KDN01_0007_C06.b : GGCGAGGCCCTGGCCACCGCAGTCATCCCCCAGTGGCAGAAGGACGAGTTCCGGGAGAAT
BFLT1_0004_C03.b : GGCGAGGCCCTGGCCACCGCAGTCATCCCCCAGTGGCAGAAGGACGAGTTCCGGGAGAAT
ADR01_0050_C06.b : GGCGAGGCCCTAGCCACCGCAGTCATCCCCCAGTGGCAGAAGGACGAATTCCGGGAGAAT
SMG01_0016_G10.b : GGCGAGGCCCTAGCCACCGCAGTCATCCCCCAGTGGCAGAAGGACGAATTCCGGGAGAAT
20110601C-000681 : CTCAAATCCCTGAAGAAGGTCATGGATGACCTAGACCGGGCTAGTAAAGCCGATGTCCAG
---------+---------+---------+---------+---------+---------+ 737
KDN01_0007_C06.b : CTCAGATCCCTGAAGAAGGTCATGGATGACCTAGACCGGGCTAGTAAAGCCGATGTCCAG
BFLT1_0004_C03.b : CTCAGATCCCTGAAGAAGGTCATGGATGACCTAGACCGGGCTAGTAAAGCCGATGTCCAG
ADR01_0050_C06.b : CTCAAATCCCTGAAGAAGGTCATGGATGACCTAGACCGGGCTAGTAAAGCCGATGTCCAG
SMG01_0016_G10.b : CTCAAATCCCTGAAGAAGGTCATGGATGACCTAGACCGGGCTAGTAAAGCCGATGTCCAG
20110601C-000681 : AAGCGGGTGTTGGAGAGGACAAAACAGCTCATTGACAGCAACCCCAACCAGCCCCTTGTC
---------+---------+---------+---------+---------+---------+ 797
KDN01_0007_C06.b : AAGCGGGTGTTGGAGAGGACAAAACAGCTCATTGACAGCAACCCCAACCAGCCCCTTGTC
BFLT1_0004_C03.b : AAGCGGGTGTTGGAGAAGGACAAACAGCTCATTGACAGCAACCCCAACCAGCCCCTTGTC
ADR01_0050_C06.b : AAGCGGGTGTTGGAGAGGACAAAACAGCTCATTGACAGCAACCCCAACCAGCCCCTTGTC
SMG01_0016_G10.b : AAGCGGGTGTTGGAGAGGACAAAACAGCTCATTGACAGCAACCCCAACCAGCCCCTTGTC
20110601C-000681 : ATCCTGGAGATGGAGAGCGGCGCCTCAGCCAAGGCCCTGAACGAAGCCTTGAAACTCTTC
---------+---------+---------+---------+---------+---------+ 857
KDN01_0007_C06.b : ATCCTGGAGATGGAGAGCGGCGCCTCAGCCAAGGCCCTGAACGAAGCCCTTGAACTCTTN
BFLT1_0004_C03.b : ATCCTGGAGATGGAGAGCGGCGCCTCAGCCAAGGCCCTGAACGAAGCCTTGAAACTCTTC
ADR01_0050_C06.b : ATCCTGGAGATGGAGAGCGGCGCCTCAGCCAAGGCCCTGAACGAAGCCTTGAAACTCTTC
SMG01_0016_G10.b : ATCCTGGAGATGGAGAGCGGCGCCTCAGCCAAGGCCCTGAACGAAGCCTTGAAACTCTTC
20110601C-000681 : AAGACACATTCTCCTCAGACGTCTGCCATGCTCTTCACAGTGGATAATGAAGCTGGCAAG
---------+---------+---------+---------+---------+---------+ 917
KDN01_0007_C06.b : CAGACACATTCTCCTCAGACGTCGGCCATGCTCTTCACAGTGGATAATGAAGCTGGGCAG
BFLT1_0004_C03.b : AAGACACATTCTCCTCAGACGTCGGCCATGCTCCTCACAGTGGATAATGAAGCTGGGCAG
ADR01_0050_C06.b : AAGACACATTCTCCTCAGACGTCTGCCATGCTCTTCACAGTGGATAATGAAGCTGGCAAG
SMG01_0016_G10.b : AAGACACATTCTCCTCAGACGTCTGCCATGCTCTTCACAGTGGATAATGAAGCTGGCAAG
20110601C-000681 : ATCATCTGCTTGTGTCAAGTCCCCCAGAATATAGCCAACCGGGGCCTGAAAGCCAGCGAG
---------+---------+---------+---------+---------+---------+ 977
KDN01_0007_C06.b : ATCATCTGCTTGTGTNCAGTCCCCCAGAtatagccaaccgggcctgaangcagcgagtgg
BFLT1_0004_C03.b : ATCATCTGCTTGTGTCAAGTCCCCAGAT*TATAGCCAACCGGGgcctgaaagccagcaag
ADR01_0050_C06.b : ATCATCTGCTTGTGTCAAGTCCCCCAGAATATAGCCAACCGGGGCCTGAAAGCCAGCGAG
SMG01_0016_G10.b : ATCATCTGCTTGTGTNCAGTCCCCCAGAATATAGCCCACCGGGGCCTGAAAGCCAGCGAG
20110601C-000681 : TGGGTGCAACAGGTGTCAGGCCTGATGGATGGCAAANGTGGTGGCAAAGATGTGTCTGCT
---------+---------+---------+---------+---------+---------+ 1037
KDN01_0007_C06.b : gtgcaacagtgtcaggctgatgatggcaanngtgtgcaagatgtgtcgctcnagcacaag
BFLT1_0004_C03.b : tgggtgcaacaggtgtcaggcctgatgaatggcaaagttggtggcaaaaattgtcgcctc
ADR01_0050_C06.b : TGGGTGGCACAGGTGTCAGGCCTGATGGATGGCAAANGTGGTGGCAAAGATGTGTCTGCT
SMG01_0016_G10.b : TGGGTGCAACAGGTGTCAGGCCTGATGGATGGCAAANGTGGTGGCAAAGATGTGTCCGCT
20110601C-000681 : CAGGCCACAGGCAAGAACGTGGGCTGCCTGC.............................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b : caaaacgtggctgctgcagagcgctgcactggcactccttgccacntcgctggaaattga
BFLT1_0004_C03.b : agccccaggcaaaaaagtgggcttgctccagaggcccttcacctgccacttctttggcaa
ADR01_0050_C06.b : CCGGCCACAGGCAAGAACGTGGGCTGCCTGCanngagcgctgcanctggccacttccttt
SMG01_0016_G10.b : CAGGCCACAAGCCAGAACGTGGGCTGCCTGCcagaggccctgcagctggccactcccctt
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b : aaactgagggaaagtgcttccccgaggggttcctctccatagtcctcacaggacttcgct
BFLT1_0004_C03.b : cttcccttgaaaaattaaaaaatggggggaaaggggccttccacaggagggtctcctcct
ADR01_0050_C06.b : gccagctccgcctgaaaatgtgaaaactgaaggggaaggtggcttccacagggagtgtct
SMG01_0016_G10.b : gcccagctccgcctggaaaatgtgagaactgagggggaaaggtggcttccacagggagat
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b : gcccaggaattaactggacttaaaccctcttccctacccaaaattgattactggacacgg
BFLT1_0004_C03.b : tcgaatattcctccaccagaacttccttctgcccaggacttttaatctggactttaaagc
ADR01_0050_C06.b : cctcctcaatgcatccgtcaaccaggactctcgtctgcacaaggacttttatcttgggac
SMG01_0016_G10.b : gttctcctccatcaatgcctccgtcccaaccgaagctttccgttggcccaaggaaatttt
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b : acaagctgttatttctgacccacctttaaacaccaaaggttttctttgttaaatttacat
BFLT1_0004_C03.b : ccttgttctccaacccaataattgaattaccgggacccgcggaaaaggcctttattttgc
ADR01_0050_C06.b : tttagcaccccctcgtctcctaaccacatactgtacttaccgggaccacctgggatcagg
SMG01_0016_G10.b : taatcttgggacctttaaacaacccccttgttcctccaaaccaagaataactggaactta
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b : gggcggattttgtagagtaaaaaaaaggggggaaacccacacannnnnnnnnatcgaata
BFLT1_0004_C03.b : ccgaacctcccccctgtaaaccccccagatggttttgtcccctgtgttaaaaatctaacc
ADR01_0050_C06.b : ccctgtttctttcggcccgaacgtcgcccttctgtaaacattcccgggatttgttttctt
SMG01_0016_G10.b : ccctgggaaccccccgggaaccaaggcccttgtaacttttggccccgaaccctcaccccc
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b : ataatatgaacgctcctccgccgcccgccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
BFLT1_0004_C03.b : agttggcgaagaattttttctaaaaagctgtttaaaaaaaagcgttctggggggcgtata
ADR01_0050_C06.b : gcaacttgttctaaaaaattttcttaaaccaggttgggcctggggaggaaattttgtgga
SMG01_0016_G10.b : ttctttaaaccccccccccgaaattcggtttacctttccaccttggtctttaaaaaaatt
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
BFLT1_0004_C03.b : aaaccccca
ADR01_0050_C06.b : aaaaaaggcagggccctcgaaaaaaaaaagcccgtgtctctgggtggcccttaattctgg
SMG01_0016_G10.b : cccgaaacccaggcttgggcccccaaaagaaattttttttgccaaaaaaaaaggcccttt
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b :
BFLT1_0004_C03.b :
ADR01_0050_C06.b : ggcac
SMG01_0016_G10.b : gcaatttgaaaaaaaaaaaaaaaaaaaaaagccccttgtctccactcgggggccgccccc
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b :
BFLT1_0004_C03.b :
ADR01_0050_C06.b :
SMG01_0016_G10.b : ctaaaattcccccggggggcccaatataaacccccctttttttaaaaggggccccctggg
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b :
BFLT1_0004_C03.b :
ADR01_0050_C06.b :
SMG01_0016_G10.b : ggctttaaaaaggggggggggcgcttttataaccccgcggaaaaaactcttttttttttt
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b :
BFLT1_0004_C03.b :
ADR01_0050_C06.b :
SMG01_0016_G10.b : taaaacaaccctcttttggggggtttgggacccccccccaatttccccggggaaaaatat
20110601C-000681 : ............................................................
---------+---------+---------+---------+---------+---------+ 1068
KDN01_0007_C06.b :
BFLT1_0004_C03.b :
ADR01_0050_C06.b :
SMG01_0016_G10.b : tttttgggggtggacacccccccgccgggcgaaatttaaaaaaaa