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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-000693

Length: 1,071

Sequence [FASTA format sequence]
GCTCGGGGCT TAATTCCAGC AAGATGGCGG CGTCCAGGGC GTCCCTGCAC CAAGTGGCCC
GCAACAGTGC TACCAGCAGC ATCCGTGCCC TGAGCAGGGG AGTGGACCCA GAGGGCAGTC
AGAGGAAGGG GAGGACACTG CTCCAGTTCC TGGCTGACCA CTTCTGTGAC GTGGAGGCTG
TCAGGGAGTA TCTGCTACGG AAGCAAGCGT TGAAGGTGCA CCGAAAAAAC CGGTTTCAGG
ACAATGAGTG GATACAGTCA GGGCGCGGCC TCTCCTCTCT TGAGTTCCGG AAGTTCCGGG
AGGTGCCAGT ACAAGCTGTC GATGCCAGTG GCTGTGCCAT CAACTACCAA GGCCTGGACA
ACCTCTGTGA GTGCAGCGGG GTGGAGATGG GCACTCTCCC TTCCACATGG GCCAACGGAG
GGCCCTTGGT GCCATCCACC TGTCCTTCCT GCAGTGGCCC TGAAGGAGCT CCAGTCCCTG
TCACTGCAGC GCTGTCCCCA CGTGGACGAC TGGTGCCTCG GCCGCCTCCA CCAGCTGGCC
GACTCCTTGC AAGAGCTCTC ACTGGCCGGT TGCCCCCGAG TCTCTGAACG AGGCCTAGCC
TGCCTCCACC ACCTCCAGTG AGACCCCGAC TTCAGGCTGG GGGAGGGTTA GGCAGTTCCC
ATATCCCTGC CTCCATGGCA GACCTTGAGC GTGTTTTAGG AAGCGGGGCA AGCACTCCTC
TGTCCACACA CGCCATCCTT ATACCCCGCT CCCCCATCTC ACCTCCTCTC AGGAACCTCC
GCAGGCTGGA TATCTCCGAC CTTCCTGCTG TGTCCAGTCC GGACCTCACT CAGATTTTGG
TGGAGGAGAT GCTGCCCAAC TGTGAGGTTC GGGGGTCTGA CTGGGCCCAG GGCCTCAAGT
TGGGGCTGGA AGAGCAGTCC CGAGACCCAG CCAGCAGCCC GGTCCCTGCC TAGCCTCAGC
CCCCTCTCAG CAGGCTGACA GCTACTTGTG GCCTCCAACG ACGTTCACTC CACCAAAGGG
TTGGGCTGGG ATGAGGGGCA CTGGCAGGTC TATACCCTGG GCTGACGTTC A


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinATP5SLATP synthase subunit s-like protein isoform 6 [Homo sapiens]. 1196e-27O
Contig/Assembly ProteinATP5SLATP synthase subunit s-like protein isoform 5 [Homo sapiens]. 1182e-51O
Contig/Assembly ProteinATP5SLATP synthase subunit s-like protein isoform 3 [Homo sapiens]. 1042e-22O
Contig/Assembly ProteinATP5SLATP synthase subunit s-like protein isoform 4 [Homo sapiens]. 1035e-47O
Contig/Assembly ProteinATP5SLATP synthase subunit s-like protein isoform 1 [Homo sapiens]. 1031e-45O
Contig/Assembly ProteinATP5SLATP synthase subunit s-like protein isoform 2 [Homo sapiens]. 99.84e-21


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAtp5slATP synthase subunit s-like protein [Mus musculus]. 99.82e-44O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC484486PREDICTED: similar to Y53G8AR.8 [Canis familiaris]. 1263e-29


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100511568PREDICTED: ATP synthase subunit s-like protein-like [Sus scrofa]. 2121e-83O


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
KDN010006B03KDN01_0006_B03.bFS671609 
KDN010063G08KDN01_0063_G08.bFS675488 AK393494
OVR010048H02OVR01_0048_H02.bBP144468 AK394887
OVRM10096G06OVRM1_0096_G06.bBP152954 
PBL010099F10PBL01_0099_F10.bBW974898 
PST010069A01PST01_0069_A01.bFS702257 
PST010084H10PST01_0084_H10.bFS703528 
SMG010017D11SMG01_0017_D11.bFS714734 
UTR010001H04UTR01_0001_H04.bBP173231 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
483A400.444WSTCA/S
G410.556TCG/S


Alignment:      TOP

20110601C-000693 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
KDN01_0063_G08.b :
KDN01_0006_B03.b :
PST01_0069_A01.b :
PST01_0084_H10.b :
OVR01_0048_H02.b : caagactttggctgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0096_G06.b : tagtttgtcxxxxxxxxxxxxxxxxxxxxxx
PBL01_0099_F10.b : nnaaggtgxxxxxxxxxxxxxxxx
UTR01_0001_H04.b : tttaggttgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SMG01_0017_D11.b : ttttggagtaacaxx
20110601C-000693 : ....................GCTCGGGGCTTAATTCCAGCAAGATGGCGGCGTCCAGGGC
---------+---------+---------+---------+---------+---------+ 40
KDN01_0063_G08.b : nnncctgctgtgGCTCTGGGCTTATTCCA**GCAGATGGCGGCGTCCAGGGC
KDN01_0006_B03.b : ttttctgcggTGGCTATGGATTCC**GCAGATGGCGGCGTCCAGGGC
PST01_0069_A01.b : nntttgctgcagtggctctgGGTTGCTTATTCC*GCAAGATGGCGGCGTCCAGGGC
PST01_0084_H10.b : nnnnaactgcgtTGGCTCTGGATTCCGCAGATGGCGGCGTCCAGGGC
OVR01_0048_H02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxGCTTAATTCCAGCAAGATGGCGGCGTCCAGGGC
OVRM1_0096_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCCAGCAAGATGGCGGCGTCCAGGGC
PBL01_0099_F10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCCAGCAAGATGGCGGCGTCCAGGGC
UTR01_0001_H04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCAAGATGGCGGCGTCCAGGGC
SMG01_0017_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGATGGCGGCGTCCAGGGC
20110601C-000693 : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
---------+---------+---------+---------+---------+---------+ 100
KDN01_0063_G08.b : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
KDN01_0006_B03.b : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
PST01_0069_A01.b : GTCCCTGCACCACGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
PST01_0084_H10.b : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
OVR01_0048_H02.b : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
OVRM1_0096_G06.b : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
PBL01_0099_F10.b : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
UTR01_0001_H04.b : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
SMG01_0017_D11.b : GTCCCTGCACCAAGTGGCCCGCAACAGTGCTACCAGCAGCATCCGTGCCCTGAGCAGGGG
20110601C-000693 : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
---------+---------+---------+---------+---------+---------+ 160
KDN01_0063_G08.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
KDN01_0006_B03.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
PST01_0069_A01.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
PST01_0084_H10.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
OVR01_0048_H02.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
OVRM1_0096_G06.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
PBL01_0099_F10.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
UTR01_0001_H04.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
SMG01_0017_D11.b : AGTGGACCCAGAGGGCAGTCAGAGGAAGGGGAGGACACTGCTCCAGTTCCTGGCTGACCA
20110601C-000693 : *CTTCTGTGACGTGGAGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
---------+---------+---------+---------+---------+---------+ 219
KDN01_0063_G08.b : *CTTCTGTGACGTGGAGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
KDN01_0006_B03.b : *CTTCTGTGACGTGGAGGCTGTCAGGGGGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
PST01_0069_A01.b : *CTTCTGTGACGTGGAGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
PST01_0084_H10.b : *CTTCTGTGACGTGGAGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
OVR01_0048_H02.b : *CTTCTGTGACGTGGAGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
OVRM1_0096_G06.b : *CTTCTGTGACGTGGAGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
PBL01_0099_F10.b : *CTTCTGTGACGTGGGGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
UTR01_0001_H04.b : GCTTCTGTGACGTGGAGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
SMG01_0017_D11.b : *CTTCTGTGACGTGGAGGCTGTCAGGGAGTATCTGCTACGGAAGCAAGCGTTGAAGGTGC
20110601C-000693 : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
---------+---------+---------+---------+---------+---------+ 278
KDN01_0063_G08.b : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
KDN01_0006_B03.b : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
PST01_0069_A01.b : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
PST01_0084_H10.b : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
OVR01_0048_H02.b : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
OVRM1_0096_G06.b : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
PBL01_0099_F10.b : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
UTR01_0001_H04.b : ACCGAAAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
SMG01_0017_D11.b : ACCG*AAAAAACCGGTTTCAGGACAATGAGTGGATACAGTCAGGGCGCGGCCTCTCCTCT
20110601C-000693 : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
---------+---------+---------+---------+---------+---------+ 338
KDN01_0063_G08.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
KDN01_0006_B03.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
PST01_0069_A01.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
PST01_0084_H10.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
OVR01_0048_H02.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
OVRM1_0096_G06.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
PBL01_0099_F10.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
UTR01_0001_H04.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
SMG01_0017_D11.b : CTTGAGTTCCGGAAGTTCCGGGAGGTGCCAGTACAAGCTGTCGATGCCAGTGGCTGTGCC
20110601C-000693 : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
---------+---------+---------+---------+---------+---------+ 398
KDN01_0063_G08.b : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
KDN01_0006_B03.b : ATCAACTACCAAGGCCTGGGCAACCTCTGTGAGTGCAGCGGGGTGGGGATGGGCACTCTC
PST01_0069_A01.b : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
PST01_0084_H10.b : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
OVR01_0048_H02.b : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
OVRM1_0096_G06.b : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
PBL01_0099_F10.b : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
UTR01_0001_H04.b : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
SMG01_0017_D11.b : ATCAACTACCAAGGCCTGGACAACCTCTGTGAGTGCAGCGGGGTGGAGATGGGCACTCTC
20110601C-000693 : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
---------+---------+---------+---------+---------+---------+ 458
KDN01_0063_G08.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
KDN01_0006_B03.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
PST01_0069_A01.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
PST01_0084_H10.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
OVR01_0048_H02.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
OVRM1_0096_G06.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
PBL01_0099_F10.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
UTR01_0001_H04.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTACCATCCACCTGTCCTTCCTGCAGTGGC
SMG01_0017_D11.b : CCTTCCACATGGGCCAACGGAGGGCCCTTGGTGCCATCCACCTGTCCTTCCTGCAGTGGC
20110601C-000693 : CCTGAAGGAGCTCCAGTCCCTGTCACTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
---------+---------+---------+---------+---------+---------+ 518
KDN01_0063_G08.b : CCTGAAGGAGCTCCAGTCCCTGTCGCTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
KDN01_0006_B03.b : CCTGAAGGAGCTCCAGTCCCTGTCGCTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
PST01_0069_A01.b : CCTGAAGGAGCTCCAGTCCCTGTCACTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
PST01_0084_H10.b : CCTGAAGGAGCTCCAGTCCCTGTCACTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
OVR01_0048_H02.b : CCTGAAGGAGCTCCAGTCCCTGTCACTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
OVRM1_0096_G06.b : CCTGAAGGAGCTCCAGTCCCTGTCGCTGCAGCGCTGTCCCCACGTGGACGACTGGTGTCT
PBL01_0099_F10.b : CCTGAAGGAGCTCCAGTCCCTGTCACTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
UTR01_0001_H04.b : CCTGAAGGAGCTCCAGTCCCTGTCGCTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
SMG01_0017_D11.b : CCTGAAGGAGCTCCAGTCCCTGTCGCTGCAGCGCTGTCCCCACGTGGACGACTGGTGCCT
20110601C-000693 : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
---------+---------+---------+---------+---------+---------+ 578
KDN01_0063_G08.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
KDN01_0006_B03.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
PST01_0069_A01.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
PST01_0084_H10.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
OVR01_0048_H02.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
OVRM1_0096_G06.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCGCTGGCCGGTTGCCCCCG
PBL01_0099_F10.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
UTR01_0001_H04.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
SMG01_0017_D11.b : CGGCCGCCTCCACCAGCTGGCCGACTCCTTGCAAGAGCTCTCACTGGCCGGTTGCCCCCG
20110601C-000693 : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
---------+---------+---------+---------+---------+---------+ 638
KDN01_0063_G08.b : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
KDN01_0006_B03.b : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
PST01_0069_A01.b : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
PST01_0084_H10.b : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
OVR01_0048_H02.b : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
OVRM1_0096_G06.b : AGTCTCTGAACGATGCCTAGCCTGCCTCCACCACCTCTAGTGAGACCCCTACTTCAGGCT
PBL01_0099_F10.b : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
UTR01_0001_H04.b : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
SMG01_0017_D11.b : AGTCTCTGAACGAGGCCTAGCCTGCCTCCACCACCTCCAGTGAGACCCCGACTTCAGGCT
20110601C-000693 : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCAGACCTTGAGCGTGTTTTA
---------+---------+---------+---------+---------+---------+ 698
KDN01_0063_G08.b : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCAGACCTTGAGCGTGTTTTA
KDN01_0006_B03.b : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCAGACCTTGAGCGTGTTTTA
PST01_0069_A01.b : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCAGACCTTGAGCGTGTTTTA
PST01_0084_H10.b : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCAGACCTTGAGCGTGTTTTA
OVR01_0048_H02.b : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCGGACCTTGAGCGTGTTTTA
OVRM1_0096_G06.b : GTGGGAGGGTTAGGCAGTctccatttctctgttcatggcatacctgtctgcgttctacga
PBL01_0099_F10.b : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCAGACCTTGAGCGTGTTTTA
UTR01_0001_H04.b : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCAGACCTTGAGCGTGTTTTA
SMG01_0017_D11.b : GGGGGAGGGTTAGGCAGTTCCCATATCCCTGCCTCCATGGCAGACCTTGAGCGTGTTTTA
20110601C-000693 : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGCTCCCCCATC
---------+---------+---------+---------+---------+---------+ 758
KDN01_0063_G08.b : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGCTCCCCCATC
KDN01_0006_B03.b : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGCTCCCCCATC
PST01_0069_A01.b : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGCTCCCCCATC
PST01_0084_H10.b : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGCTCCCCCATC
OVR01_0048_H02.b : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGCTCCCCCATC
OVRM1_0096_G06.b : ttctgcgttatctcctcttgttcttagcgtcacctttatccctcttccccttctctcctt
PBL01_0099_F10.b : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGCTCCCCCATC
UTR01_0001_H04.b : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGCTCCCCCATC
SMG01_0017_D11.b : GGAAGCGGGGCAAGCACTCCTCTGTCCACACACGCCATCCTTATACCCCGTTCCCCCATC
20110601C-000693 : TCACCTCCTCTCAGGAACCTCC*GCAGGCTGGATATCTCCGACCTTCCTGCTGTGTCCAG
---------+---------+---------+---------+---------+---------+ 817
KDN01_0063_G08.b : TCACCTCCTCTCAGGAACCTCC*GCAGGCTGGATATCTCCGACCTTCCTGCTGTGTCCAG
KDN01_0006_B03.b : TCACCTCCTCTCAGGAACCTCC*GCAGGCTGGATATCTCCGACCTTCCTGCTGTGTCCAG
PST01_0069_A01.b : TCACCTCCTCTCAGGAACCTCC*GCAGGCTGGATATCTCCGACCTTCCTGCTGTGTCCAG
PST01_0084_H10.b : TCACCTCCTCTCAGGAACCTCC*GCAGGCTGGATATCTCCGACCTTCCTGCTGTGTCCAG
OVR01_0048_H02.b : TCACCTCCTCTCAGGAACCTCC*GCAGGCTGGATATCTCCGACCTTCCTGCTGTGTCCAG
OVRM1_0096_G06.b : tccatgatcctttctgcttgtcttttcgc
PBL01_0099_F10.b : TCACCTCCTCTCAGGAACCTCC*GCANGCTGGATATCTCCGACCTTCCTGCTGTGTCCAG
UTR01_0001_H04.b : TCACCTCCTCTCAGcaggctgacagctacttgtggcctccaccgacgttcactcagccga
SMG01_0017_D11.b : TCACCTCCTCTCAGGAACCTCCCGCAGGCTGGATATCTCCCAACCTTCTGCCGTGTCCCG
20110601C-000693 : TCCGGACCTCACTCAGATTTTGGTGGAGGAGATGCTGCCCAACTGTGAGGTTCGGGGGTC
---------+---------+---------+---------+---------+---------+ 877
KDN01_0063_G08.b : TCCGGACCTCACTCAGATTTTGGTGGAGGAGATGCTGCCCAACTGTGAGGGTCGGGGGTC
KDN01_0006_B03.b : TCCGGAACTCACTCAGATTTTGGTGGAGGAGATGCTGCCCCACTGTGAGGGTCGGGGGTC
PST01_0069_A01.b : TCCGGACCTCACTCAGATTTTGGTGGAGGAGATGCTGCCCAACTGTGAGGTTCGGGGGTC
PST01_0084_H10.b : TCCGGACCTCACTCAGATTTTGGTGGAGGAGATGCTGCCCAACTGTGAGGTTCGGGGGTC
OVR01_0048_H02.b : TCCGGACCTCACTCAGATTTTGGTGGAGGAGATGCTGCCCAATTGTGAGGTTCGGGGGTC
OVRM1_0096_G06.b :
PBL01_0099_F10.b : TCCGGACCTCACTCAGATTTTGGTGGAGGAGATGCTGNCCAACTGTGANGTTCGGGGGTC
UTR01_0001_H04.b : agggttgggctggga
SMG01_0017_D11.b : TCCCGACCTCccctcaatttttgtgggagaaaatgctgccccactgtgaggttccggggg
20110601C-000693 : TGACTGGGCCCAGGGCCTCA*AGTTGGGGCTGGAAGAGCAGTCCCGAGACCCAGCCAGCA
---------+---------+---------+---------+---------+---------+ 936
KDN01_0063_G08.b : TGACTGGGCCCAGGGCCTCA*AGTTGGGGCTGGAGGAGCAGTCCCGAGACCCAGCCAGCA
KDN01_0006_B03.b : TGACTGGGCCCCGGGCCTCNNAGTTTGGGCTGGAGGAGCAGTCCCGAGACCCAGCCAGCA
PST01_0069_A01.b : TGACTGGGCCCAGGGCCTCA*AGTTGGGGCTGGNAGAGCAGTCCCGAGAC*CAGCCAGCA
PST01_0084_H10.b : TGACTGGGCCCAGGGCCTCA*AGTTGGGGCTGGGAGAGCAGTCCCGAGAACCAGCCAGCA
OVR01_0048_H02.b : TGACTGGGCC*AGGGCCTCA*AGTTGGGGgctggaggagcaatccccaagacccaaccag
OVRM1_0096_G06.b :
PBL01_0099_F10.b : TGACTGGGCCCAGGGCCCTC*AGTTGGGGCTGGGAGAGCAGTCCCGAGACCCAGCCAGCA
UTR01_0001_H04.b :
SMG01_0017_D11.b : tctgaatgggccccaggccccccagttggggctgggaggaccattcccgaaaacccatcc
20110601C-000693 : GCCCGGTCCCTGCCTAGCCTCAGCCCCCTCTCAGCAGGCTGACAGCTACTTGTGGCCTCC
---------+---------+---------+---------+---------+---------+ 996
KDN01_0063_G08.b : GCCCGGTCCCTGGCTAGGCTCAGCCCCCTCTCAGCAGGCTGACAGCTACTTGTGGGCTCC
KDN01_0006_B03.b : GCCCGGTCCTTGCCTAGCCTCAGGCCCCTCTCAGCAGGCTGACAGCTTACTGTGGCCTCC
PST01_0069_A01.b : GCCCGGTCCCTGCCTAGCCTCAGCCCCCTCTCAGCAAGCTGACAGCTACTTGTGGGCTCC
PST01_0084_H10.b : GCCCCGGTCCTGCCTAGCCTCAGCCCCCTCTCAGCAGGCTGACGGCTACTTGTGGNCCTC
OVR01_0048_H02.b : caacccgggtccctgcccaacctcaagccccctctcaacaggctgacagctacttggggg
OVRM1_0096_G06.b :
PBL01_0099_F10.b : GCCCGGTCCCTG*CTAGCCTCAGCCCCCTCTCANCAGGCTGACAGCTACTTGTGGCCCCT
UTR01_0001_H04.b :
SMG01_0017_D11.b : agaaagcccggtccccggcctaaccccaacccctccccaaaaggggtgaaagctcacttg
20110601C-000693 : AACGACGTTCACTC*CACCAAAGGGTTGGGCTGGGATGAGGGGCACTGGCAGGTCTATAC
---------+---------+---------+---------+---------+---------+ 1055
KDN01_0063_G08.b : ACCGACGTTCCACT*CACCAAAGGGTTGGGCTGGGATGAGGGGCACTGGGCAGTCTATAC
KDN01_0006_B03.b : CACGACGTTCACTC*ANCCCAAGGGTTTGGCCTGGATGAGGGGCACTGGCAGtctatacc
PST01_0069_A01.b : AACGACGTTCACTT*CACCAAAGGGTTGGGCTGGGATGAAGGGCACTGGCAGGTCTATAC
PST01_0084_H10.b : ACCGAACGTCACTC*ANCCCAA*GGTTGGGCTGGGATGAAGGGCACTGGCAGGTCTTTAC
OVR01_0048_H02.b : cctccaccgaacgttcattcaacccaaagggttggggcgggggaatgaggggggaccggg
OVRM1_0096_G06.b :
PBL01_0099_F10.b : CACGACGTTCACTCACCCCAAAGGGTGGGGCTGGAATGAGGGGCACTGGCAGGTCTATAC
UTR01_0001_H04.b :
SMG01_0017_D11.b : ggggcctcccccgaagttctctccctcccaaagggtttggctgggaatgaagggcccttg
20110601C-000693 : CCTGGGCTGACGTTCA............................................
---------+---------+---------+---------+---------+---------+ 1071
KDN01_0063_G08.b : CCTGGGCTGACGTTCcaggctgtcacccactcttttctattccagggacttcttcccctg
KDN01_0006_B03.b : ctgggctgacgtccaaggctggccaaccatccttcccagttccgggactccttctcctgc
PST01_0069_A01.b : CCTGGGCTGACGTTCcaggctgttcacccactcctttcccagtccaaggacttcctctcc
PST01_0084_H10.b : CCTGGGCTGACGTTCAaggctgttcaacccctcttttctcatttccgggacctcttctcc
OVR01_0048_H02.b : cggggttttttcccctggggcttgaactttttccagggggttgtcccacacccctttcct
OVRM1_0096_G06.b :
PBL01_0099_F10.b : CCTGGGCTGACGTTCcaggctgtccacacctcccttcccatttcaggaacctcttctctg
UTR01_0001_H04.b :
SMG01_0017_D11.b : ggaggtcttaaccccggggtggaagtttcacgggggcccccccccctccttttccctttc
20110601C-000693 : ............................................................
---------+---------+---------+---------+---------+---------+ 1071
KDN01_0063_G08.b : ctctccagtctgggcttcgggtaaagtacctcccgtggggttccccaccccgccgcttgg
KDN01_0006_B03.b : cccccgggctaggcttctgaaaaataactccccttgggttcccaccccccccgcctgggc
PST01_0069_A01.b : tgcctcctcaggtcagggcttcgggcaaaatacctctccctgggggttcccaagccagcc
PST01_0084_H10.b : tgcctcctcaggttagggcttcgggctacagtagctctccctggggttccccgcccgccc
OVR01_0048_H02.b : tttttttcaattttcccagggggaaaccttc
OVRM1_0096_G06.b :
PBL01_0099_F10.b : cctcctcagtctagggcttctgctcaaataactccccctggggtttccccacccagcccc
UTR01_0001_H04.b :
SMG01_0017_D11.b : ccggggaactcctttcctggcccctctggggaaaggggttcgggccccaaaaaaccctcc
20110601C-000693 : ............................................................
---------+---------+---------+---------+---------+---------+ 1071
KDN01_0063_G08.b : gtcgggaacttcttaattgggaattacccccgaagggtgcctttccgaagggggcgacgg
KDN01_0006_B03.b : aggaatttcttactgggaataccaccggaggcgcgcttcccgaaggggcgcacccttgtg
PST01_0069_A01.b : cgcctttgggcaggaacttcctctaagtgggaattaacccccggaagggctgctttttcg
PST01_0084_H10.b : ggctctgggtcaggaactttcctaaattgggaattaaccacctgaggggctgcctttcgg
OVR01_0048_H02.b :
OVRM1_0096_G06.b :
PBL01_0099_F10.b : ccttggtttaggaatttcctaacttgtgaaatacccccggaggggcccctttcccgcagg
UTR01_0001_H04.b :
SMG01_0017_D11.b : cttggggtcccccccccacccccccccctctgttcggggaaatttcctctatgttgggaa
20110601C-000693 : ............................................................
---------+---------+---------+---------+---------+---------+ 1071
KDN01_0063_G08.b : cttgttggggtttttcttttaggccccctgccaaggaattctcgggtatcaaatagttgt
KDN01_0006_B03.b : gggtttttcttttggcccccggcatatgattccgggttaacaattatgttgcaaccaagt
PST01_0069_A01.b : gtcagggggcaccccgcttgtttgggtttttttcctttatgcccccctgccacataggaa
PST01_0084_H10.b : gcaggggggccaccgcttgttgggggttttttgtttttaggcccccccgccccattgaaa
OVR01_0048_H02.b :
OVRM1_0096_G06.b :
PBL01_0099_F10.b : ggggccccgcctgttgggggttttttgcttttgggccaccctgcacataaaatctccggt
UTR01_0001_H04.b :
SMG01_0017_D11.b : taaaccccccgcgggtggcgccctttccccaacggagagcgcccccccattttgtggggt
20110601C-000693 : ............................................................
---------+---------+---------+---------+---------+---------+ 1071
KDN01_0063_G08.b : gacacccaggttccaacgggtcttccggagggggagaaaaccccccggtccgaatttctc
KDN01_0006_B03.b : tccaacgggtttcaccggaggcgggaaaccccccggtccaaaattccgcgaggggaacgg
PST01_0069_A01.b : tctcggggtaataaaaattattgtggaaatacaaggtttcccaaaggtgggcttaccctg
PST01_0084_H10.b : tccgcgggttttacaaattacgtgggaacacaccaaggtttcaaagccgtggtcttacct
OVR01_0048_H02.b :
OVRM1_0096_G06.b :
PBL01_0099_F10.b : gtacaaaaaaacgggtgacaaccgagttccaacgggggtttccacggag
UTR01_0001_H04.b :
SMG01_0017_D11.b : ttttttctttttagggccccacgcccccaaatgattatcctccgggtcctccaaatacga
20110601C-000693 : ............................................................
---------+---------+---------+---------+---------+---------+ 1071
KDN01_0063_G08.b : ctaggggaatcggccgtttaaagtttttggac
KDN01_0006_B03.b : gacgttctaaattttttgagaaacccngggccccacccacagggcccccgccccccataa
PST01_0069_A01.b : aggggccgggataaactctccgtgtc
PST01_0084_H10.b : tgagggg
OVR01_0048_H02.b :
OVRM1_0096_G06.b :
PBL01_0099_F10.b :
UTR01_0001_H04.b :
SMG01_0017_D11.b : gttgtgtccac
20110601C-000693 : ............................................................
---------+---------+---------+---------+---------+---------+ 1071
KDN01_0063_G08.b :
KDN01_0006_B03.b : cccctcttttctaaaaancccacaaaggtcttagtgttctaanta
PST01_0069_A01.b :
PST01_0084_H10.b :
OVR01_0048_H02.b :
OVRM1_0096_G06.b :
PBL01_0099_F10.b :
UTR01_0001_H04.b :
SMG01_0017_D11.b :