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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-000796

Length: 1,107

Sequence:  [FASTA format sequence]
TTGTTGGCCT ACTGGAGCAT TGCGGGCAGG CAGCGGCTCT GGGTCCACTC AGCGCATCCC
GCTCTGCGAG GCAGACATGA GGGCGGAGGG AATGTCCCTC TTCCTGGCTC TGGGGCTCCT
GGTGGCTGGG CTCTGCTCCA GGGTCCACTG CGTCCCAGCG GATGACCTTG CCTCAAAGAC
TGTGACCCTG AAGGGCCAGA TCAAGAAGCT GCCAGCGCAC AACACCGCCG TCGTCTCCAG
CAACACCGAC TTCGCCTTCA GCCTCTACAA GCAGCTGGCT CTGGCCGAAC GCAGAGAAAA
TGTCATCTTC TCCCCGCTGA GCGTCTCCAT AGCCTTGGCC TTCCTGTCTC TGGGGGCCCG
AGGCCCCACC CTGATAGAGC TCCTGGAAGG CCTCAAGTTC AACCTCACAA AGACCCCCGA
GGCAGAAATC CACCAGGGCT TCCAGCACCT CCTGCAGGCC CTCAGCCAAC CCAGCAACCT
GCTGCAGCTG AACGTGGGCA ACGCCATGTT CGTGGATGAG CGGCTGAAGC TGCTGGACAA
GTTCGTCCAA GATGCCCGTG AGCTGTACTT CTCCGAGGTC TTCTCCATCA GCTTTAAGGA
CTCCGATGCT GCCATAGAGT TCATCAACAA CTATGTAAAG AATAAGACCA AGGGGAAAAT
TGTGGATTTG TTCAAACAAC TTTCCCCGGA TACCGTCCTG GTTCTGGTGA ACTGCATCTA
CTTTAAAGCC AAGTGGAAGA TGCCCTTCAA TCCCAACTTT ACCACGGGGG CAGATTTCCA
CGTGAGCAAG AACAGGACGG TGAGGGTGCC CATGATGGGC ATTACGGGCC GCACCGTGCC
TTACTTCCGG GACCAGGAGC TGGCCTGCAC GGTGGTGGAG CTCCCGTACA CCAGCAACGA
CAGCGCGCTC TTCATCCTCC CTGACGACGG CAGGATGGAG GACGTGGAAA GCCAAGCTGC
TCCCGGAGAC ACTGAGGAGG TGGAAGAGAC TCCCTGCAGC CCAAACGGAT AACTGCCCTC
CACCTGCCAC GGTTTTCCGT CTCCGGGGGA CTATAAGCTG CATGACATCC TTCCCCACCT
GGGCATTAAA AAAGTCTTCA CCCACCA

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		SERPINA3	alpha-1-antichymotrypsin precursor [Homo sapiens].	314	8e-86	O
		SERPINA1	alpha-1-antitrypsin precursor [Homo sapiens].	234	1e-61	O
		SERPINA5	plasma serine protease inhibitor [Homo sapiens].	234	1e-61	O
		SERPINA1	alpha-1-antitrypsin precursor [Homo sapiens].	234	1e-61	O
		SERPINA1	alpha-1-antitrypsin precursor [Homo sapiens].	234	1e-61	O
		SERPINA1	alpha-1-antitrypsin precursor [Homo sapiens].	234	1e-61	O
		SERPINA1	alpha-1-antitrypsin precursor [Homo sapiens].	234	1e-61	O
		SERPINA1	alpha-1-antitrypsin precursor [Homo sapiens].	234	1e-61	O
		SERPINA1	alpha-1-antitrypsin precursor [Homo sapiens].	234	1e-61	O
		SERPINA1	alpha-1-antitrypsin precursor [Homo sapiens].	234	1e-61	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Serpina3c	serine protease inhibitor A3C precursor [Mus musculus].	297	9e-81	O
		Serpina3f	serine protease inhibitor A3F [Mus musculus].	291	5e-79	O
		Serpina3f	serine protease inhibitor A3F [Mus musculus].	291	5e-79	O
		Serpina3f	serine protease inhibitor A3F [Mus musculus].	291	5e-79	O
		Serpina3i	PREDICTED: serine protease inhibitor A3F isoform 1 [Mus musculus].	286	2e-77	O
		Serpina3i	serine (or cysteine) peptidase inhibitor, clade A, member 3I [Mus musculus].	286	2e-77	O
		Serpina3m	serine protease inhibitor A3M precursor [Mus musculus].	286	3e-77	O
		Serpina3i	PREDICTED: serine protease inhibitor A3F isoform 2 [Mus musculus].	286	2e-77	O
		Serpina3n	serine protease inhibitor A3N precursor [Mus musculus].	285	6e-77	O
		Serpina3g	serine protease inhibitor A3G [Mus musculus].	285	6e-77	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC480425	PREDICTED: similar to Alpha-1-antichymotrypsin precursor (ACT) [Canis familiaris].	333	1e-91	O
		SERPINA1	serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Canis lupus familiaris].	234	1e-61	O
		LOC480423	PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9 [Canis familiaris].	226	2e-59	O
		LOC490838	PREDICTED: similar to Corticosteroid-binding globulin precursor (CBG) (Transcortin) [Canis familiaris].	221	7e-58	O
		LOC612381	PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 [Canis familiaris].	219	4e-57	O
		LOC481007	PREDICTED: similar to Thyroxine-binding globulin precursor (T4-binding globulin) [Canis familiaris].	218	6e-57	O
		LOC490840	PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4 [Canis familiaris].	214	9e-56	O
		LOC480424	PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 [Canis familiaris].	207	1e-53	O
		LOC612386	PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 [Canis familiaris].	206	2e-53	O
		LOC612383	PREDICTED: similar to Corticosteroid-binding globulin precursor (CBG) (Transcortin) [Canis familiaris].	163	3e-40

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		SERPINA3-8	SERPINA3-8 [Bos taurus].	377	e-105	O
		LOC784932	PREDICTED: endopin 2C-like [Bos taurus].	369	e-102	O
		SERPINA3-6	serpin A3-6 [Bos taurus].	366	e-101	O
		SERPINA3	serpin A3-5 [Bos taurus].	362	e-100	O
		LOC784932	PREDICTED: endopin 2B-like [Bos taurus].	361	e-100	O
		SERPINA3-2	serpin A3-2 [Bos taurus].	357	1e-98	O
		SERPINA3-1	serpin A3-1 precursor [Bos taurus].	355	4e-98	O
		SERPINA3-3	serpin A3-3 [Bos taurus].	354	9e-98	O
		LOC100138846	PREDICTED: endopin 2C-like [Bos taurus].	352	1e-97	O
		SERPINA3-7	serpin A3-7 [Bos taurus].	351	6e-97	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		LOC100153899	PREDICTED: serpin A3-8 [Sus scrofa].	539	e-153	O
		SERPINA3-2	alpha-1-antichymotrypsin 2 [Sus scrofa].	460	e-130	O
		LOC100156325	PREDICTED: serpin A3-6 [Sus scrofa].	459	e-130	O
		SERPINA3-3	PREDICTED: serpin A3-5 [Sus scrofa].	440	e-124
		SERPINA3-1	PREDICTED: serpin A3-6 [Sus scrofa].	316	1e-86	O
		LOC100622237	PREDICTED: serpin A3-8-like, partial [Sus scrofa].	257	9e-69	O
		SERPINA1	alpha-1-antitrypsin precursor [Sus scrofa].	243	2e-64	O
		LOC100155953	PREDICTED: serpin A11 [Sus scrofa].	226	2e-59	O
		SERPINA11	PREDICTED: serpin A11 [Sus scrofa].	224	7e-59	O
		LOC100153513	PREDICTED: plasma serine protease inhibitor-like [Sus scrofa].	224	5e-59	O