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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-001471

Length: 893

Sequence [FASTA format sequence]
GCCAGGAGGC TGAGGAGGCC GCGTCCCAGG AGTGTCCCCA CCATGGCCTG GACGGTGCTT
CTGATCGGGC TCCTCGCTGT CGGCTCAGGG GTGGATTCTC AGACTGTGAT CCAGGAGCCG
GCGATGTCAG TGTCTCCTGG AGGGACCGTC ACACTCACCT GTGCCTTTAC CTCTGGGTCA
GTCACTACTA GTAACTACCC CAGCTGGTTC CAGCAGACAC CAGGCCAGCC TCCCCGACAG
CTGATCTACA GCACAAACAA CCGCCCGACT GGGGTCCCCA GTCGCTTCTC TGGAGCCATC
TCTGGGAACA AAGCCGCCCT CACCATCACG GGGGCCCAGG CTGAGGACGA GGCCGACTAT
TTCTGCCGTC TTTATAAAAG TGGTGATAAT ATTCCCTTCG GCGGTGGGAC CCATCTGACC
GTCCTCGGTC AGCCCAAGGC CACTCCCACG GTCAACCTCT TCCCGCCCTC CTCTGAGGAG
CTCGGCACCA ACAAGGCCAC CCTGGTGTGT CTAATAAGTG ACTTCTACCC GGGCGCCGTG
ACGGTGACCT GGAAGGCAGG CAGCACCACC GTCACCCAGG GCGTGGAGAC CACCAAGCCC
TCGAAACAGA GCAACAACAA GTACGCGGCC AGCAGCTACC TGGCCCTGTC CGCCAGTGAC
TGGAAATCTT CCAGCGGCTT CACCTGCCAG GTCACCCACG AGGGGACCAT TGTGGAGAAG
ACAGTGACGC CCTCCGAGTG CGCCTAGGTC CCTGGGCCCC CACCCTCAGG GGCCTGGAGC
CACAGGACCC CCGCGAGGGT CTCCCCGCGC CCCTGGTCCA GCCAGCCCCT CCTCCTGCAC
CTGTCAACTC CCAATAAACC GTCCTCCTTG TCTTTTAAAA AAAAAAAAAA AAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinIGLL5immunoglobulin lambda-like polypeptide 5 [Homo sapiens]. 1624e-40O
Contig/Assembly ProteinIGLL1immunoglobulin lambda-like polypeptide 1 isoform a precursor [Homo sapiens]. 1572e-38O
Contig/Assembly ProteinLOC651536PREDICTED: immunoglobulin omega chain-like [Homo sapiens]. 85.95e-17O
Contig/Assembly ProteinLOC100653210PREDICTED: ig kappa chain V-III region VG-like [Homo sapiens]. 85.18e-17O
Contig/Assembly ProteinLOC100652743PREDICTED: ig kappa chain V-III region VH-like [Homo sapiens]. 84.31e-16O
Contig/Assembly ProteinLOC100291786PREDICTED: ig kappa chain V-III region VH-like [Homo sapiens]. 842e-16O
Contig/Assembly ProteinLOC100291786PREDICTED: ig kappa chain V-III region VH-like [Homo sapiens]. 842e-16
Contig/Assembly ProteinLOC100130100PREDICTED: ig kappa chain V-I region Walker-like [Homo sapiens]. 82.84e-16O
Contig/Assembly ProteinLOC100130100PREDICTED: ig kappa chain V-I region Walker-like [Homo sapiens]. 82.84e-16O
Contig/Assembly ProteinLOC642838PREDICTED: ig kappa chain V-I region Walker-like [Homo sapiens]. 81.69e-16


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinIgll1immunoglobulin lambda-like polypeptide 1 [Mus musculus]. 1402e-33O
Contig/Assembly ProteinVpreb1immunoglobulin iota chain precursor [Mus musculus]. 69.34e-12O
Contig/Assembly ProteinVpreb2immunoglobulin omega chain precursor [Mus musculus]. 68.95e-12O
Contig/Assembly ProteinLOC620017PREDICTED: similar to Ig kappa chain V-V region L7 precursor [Mus musculus]. 67.41e-11
Contig/Assembly ProteinVpreb3pre-B lymphocyte protein 3 [Mus musculus]. 65.94e-11O
Contig/Assembly ProteinLOC100045212PREDICTED: signal-regulatory protein beta-2-like [Mus musculus]. 52.45e-07O
Contig/Assembly ProteinSirpb1asignal-regulatory protein beta 1 [Mus musculus]. 50.81e-06O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 3 [Canis familiaris]. 2593e-69O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 12 [Canis familiaris]. 2531e-67O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 1 [Canis familiaris]. 2524e-67O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 16 [Canis familiaris]. 2516e-67O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 11 [Canis familiaris]. 2515e-67O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 15 [Canis familiaris]. 2518e-67O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 9 [Canis familiaris]. 2501e-66O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 17 [Canis familiaris]. 2501e-66O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 13 [Canis familiaris]. 2501e-66O
Contig/Assembly ProteinLOC607364PREDICTED: similar to Immunoglobulin lambda-like polypeptide 1 precursor (Immunoglobulin-related 14.1 protein) (Immunoglobulin omega polypeptide) (Lambda 5) (CD179b antigen) isoform 10 [Canis familiaris]. 2484e-66O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinIGLL1immunoglobulin lambda-like polypeptide 1 [Bos taurus]. 2423e-64O
Contig/Assembly ProteinLOC616727PREDICTED: immunoglobulin lambda-like polypeptide 1-like [Bos taurus]. 2354e-62O
Contig/Assembly ProteinLOC100336952PREDICTED: IGL@ protein-like [Bos taurus]. 1341e-31
Contig/Assembly ProteinLOC100141470PREDICTED: IGK protein-like [Bos taurus]. 1163e-26O
Contig/Assembly ProteinLOC100141470PREDICTED: IGK protein-like [Bos taurus]. 1163e-26O
Contig/Assembly ProteinLOC100138815PREDICTED: immunoglobulin iota chain-like, partial [Bos taurus]. 1157e-26
Contig/Assembly ProteinLOC100138815PREDICTED: immunoglobulin iota chain-like [Bos taurus]. 1117e-25O
Contig/Assembly ProteinLOC100336586PREDICTED: immunoglobulin iota chain-like, partial [Bos taurus]. 1094e-24O
Contig/Assembly ProteinLOC404062PREDICTED: immunoglobin light chain VJ region, partial [Bos taurus]. 1041e-22O
Contig/Assembly ProteinLOC616727PREDICTED: immunoglobulin lambda-6a light chain variable region-like [Bos taurus]. 97.81e-20O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100152327immunoglobulin lambda-like polypeptide 5 [Sus scrofa]. 414e-116O
Contig/Assembly ProteinLOC100621525PREDICTED: immunoglobulin lambda-like polypeptide 5-like [Sus scrofa]. 3022e-82O
Contig/Assembly ProteinLOC100622797PREDICTED: hypothetical protein LOC100622797 [Sus scrofa]. 2231e-58
Contig/Assembly ProteinLOC100523213PREDICTED: immunoglobulin lambda-like polypeptide 5-like [Sus scrofa]. 1884e-48O
Contig/Assembly ProteinLOC100623458PREDICTED: ig lambda chain V-III region SH-like [Sus scrofa]. 1115e-25O
Contig/Assembly ProteinLOC100623670PREDICTED: hypothetical protein LOC100623670 [Sus scrofa]. 1108e-25O
Contig/Assembly ProteinLOC100625243PREDICTED: ig kappa chain V-II region RPMI 6410-like [Sus scrofa]. 80.12e-15O
Contig/Assembly ProteinLOC100624983PREDICTED: ig kappa chain V-I region HK102-like [Sus scrofa]. 77.88e-15O
Contig/Assembly ProteinLOC100624691PREDICTED: ig kappa chain V-I region HK102-like [Sus scrofa]. 76.62e-14O
Contig/Assembly ProteinLOC100154316PREDICTED: immunoglobulin iota chain-like [Sus scrofa]. 75.15e-14O


Assembly Members: 4      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
SPLT10029E06SPLT1_0029_E06.bHX241452 
SPLT10031B02SPLT1_0031_B02.bHX241563 
SPLT10070G05SPLT1_0070_G05.bHX244671 
SPLT10072G11SPLT1_0072_G11.bHX244831 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
170C200.500WNACC/T
G200.500AGC/S
442A200.500WNACT/T
G200.500GCT/A


Alignment:      TOP

20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SPLT1_0070_G05.b : nnnnaagcgagtagacgccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0072_G11.b : nnnaaagcggtacgacgccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0031_B02.b : nnnnaagcagtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0029_E06.b : nnnaaagcgagtagaggccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-001471 : .GCCAGGAGGCTGAGGAGGCCGCGTCCCAGGAGTGTCCCCACCATGGCCTGGACGGTGCT
---------+---------+---------+---------+---------+---------+ 59
SPLT1_0070_G05.b : xGCCAGGAGGCTGAGGAGGCCGCGTCCCAGGAGTGTCCCCACCATGGCCTGGACGGTGCT
SPLT1_0072_G11.b : xxGCAGGAGGCTGAGGAGGCCGCGTCCCAGGAGTGTCCCCACCATGGCCTGGACGGTGCT
SPLT1_0031_B02.b : xxxGAGGAGGCTCACGTGGCCGCGTCCCAGGAGTGTCCCCACCATGGCCTGGACCGCGCT
SPLT1_0029_E06.b : xxxGAGGAGGCTGAGGAGGCCGCGTCCCAGGAGTGTCCCCACCATGGCCTGGACGGTGCT
20110601C-001471 : TCTGATCGGGCTCCTCGCTGTCGGCTCAGGGGTGGATTCTCAGACTGTGATCCAGGAGCC
---------+---------+---------+---------+---------+---------+ 119
SPLT1_0070_G05.b : TCTGATCGGGCTCCTCGCTGTCGGCTCAGGGGTGGATTCTCAGACTGTGATCCAGGAGCC
SPLT1_0072_G11.b : TCTGATCGGGCTCCTCGCTGTCGGCTCAGGGGTGGATTCTCAGACTGTGATCCAGGAGCC
SPLT1_0031_B02.b : TCTGATCGGGCTCCTCGCTGTCGGCTCAGGGGTGGATTCTCAGACTGTGATCCAGGAGCC
SPLT1_0029_E06.b : TCTGATCGGGCTCCTCGCTGTCGGCTCAGGGGTGGATTCTCAGACTGTGATCCAGGAGCC
20110601C-001471 : GGCGATGTCAGTGTCTCCTGGAGGGACCGTCACACTCACCTGTGCCTTTACCTCTGGGTC
---------+---------+---------+---------+---------+---------+ 179
SPLT1_0070_G05.b : GGCGATGTCAGTGTCTCCTGGAGGGACCGTCACACTCACCTGTGCCTTTAGCTCTGGGTC
SPLT1_0072_G11.b : GGCGATGTCAGTGTCTCCTGGAGGGACCGTCACACTCACCTGTGCCTTTAGCTCTGGGTC
SPLT1_0031_B02.b : GGCGATGTCAGTGTCTCCTGGAGGGACCGTCACACTCACCTGTGCCTTTACCTCTGGGTC
SPLT1_0029_E06.b : GGCGATGTCAGTGTCTCCTGGAGGGACCGTCACACTCACCTGTGCCTTTACCTCTGGGTC
20110601C-001471 : AGTCACTACTAGTAACTACCCCAGCTGGTTCCAGCAGACACCAGGCCAGCCTCCCCGACA
---------+---------+---------+---------+---------+---------+ 239
SPLT1_0070_G05.b : AGTCACTACTAGTAACTACCCCAGCTGGTTCCAGCAGACGCCAGGCCAGCCTCCCCGACA
SPLT1_0072_G11.b : AGTCACTACTAGTAACTACCCCAGCTGGTTCCAGCAGACACCAGGCCAGCCTCCCCGACA
SPLT1_0031_B02.b : AGTCACTACTAGTAACTACCCCAGCTGGTTCCAGCAGACACCAGGCCAGCCTCCCCGACA
SPLT1_0029_E06.b : AGTCACTACTAGTAACTACCCCAGCTGGTTCCAGCAGACACCAGGCCAGCCTCCCCGACA
20110601C-001471 : GCTGATCTACAGCACAAACAACCGCCCGACTGGGGTCCCCAGTCGCTTCTCTGGAGCCAT
---------+---------+---------+---------+---------+---------+ 299
SPLT1_0070_G05.b : GCTGATCTACAGCACAAACAACCGCCCGACTGGGGTCCCCAGTCGCTTCTCTGGAGCCAT
SPLT1_0072_G11.b : GCTGATCTACAGCACAAACAACCGCCCGACTGGGGTCCCCAGTCGCTTCTCTGGAGCCAT
SPLT1_0031_B02.b : GCTGATCTACAGCACAAACAACCGCCCGACTGGGGTCCCCAGTCGCTTCTCTGGAGCCAT
SPLT1_0029_E06.b : GCTGATCTACAGCACAAACAACCGCCCGACTGGGGTCCCCAGTCGCTTCTCTGGAGCCAT
20110601C-001471 : CTCTGGGAACAAAGCCGCCCTCACCATCACGGGGGCCCAGGCTGAGGACGAGGCCGACTA
---------+---------+---------+---------+---------+---------+ 359
SPLT1_0070_G05.b : CTCTGGGAACAAAGCCGCCCTCACCATCACGGGGGCCCAGGCTGAGGACGAGGCCGACTA
SPLT1_0072_G11.b : CTCTGGGAACAAAGCCGCCCTCACCATCACGGGGGCCCAGGCTGAGGACGAGGCCGACTA
SPLT1_0031_B02.b : CTCTGGGAACAAAGCCGCCCTCACCATCACGGGGGCCCAGGCTGAGGACGAGGCCGACTA
SPLT1_0029_E06.b : CTCTGGGAACAAAGCCGCCCTCACCATCACGGGGGCCCAGGCTGAGGACGAGGCCGACTA
20110601C-001471 : TTTCTGCCGTCTTTATAAAAGTGGTGATAATATTCCCTTCGGCGGTGGGACCCATCTGAC
---------+---------+---------+---------+---------+---------+ 419
SPLT1_0070_G05.b : TTTCTGCCGTCTTTATAAAAGTGGTGATAATATTCCCTTCGGCGGTGGGACCCATCTGAC
SPLT1_0072_G11.b : TTTCTGCCGTCTTTATAAAAGTGGTGATAAGATTCCCTTCGGCGGTGGGACCCATCTGAC
SPLT1_0031_B02.b : TTTCTGCCGTCTTTATAAAAGTGGTGATAATATTCCCTTCGGCGGTGGGACCCATCTGAC
SPLT1_0029_E06.b : TTTCTGCCGTCTTTATAAAAGTGGTGATAATATTCCCTTCGGCGGTGGGACCCATCTGAC
20110601C-001471 : CGTCCTCGGTCAGCCCAAGGCCACTCCCACGGTCAACCTCTTCCCGCCCTCCTCTGAGGA
---------+---------+---------+---------+---------+---------+ 479
SPLT1_0070_G05.b : CGTCCTCGGTCAGCCCAAGGCCACTCCCACGGTCAACCTCTTCCCGCCCTCCTCTGAGGA
SPLT1_0072_G11.b : CGTCCTCGGTCAGCCCAAGGCCACTCCCACGGTCAACCTCTTCCCGCCCTCCTCTGAGGA
SPLT1_0031_B02.b : CGTCCTCGGTCAGCCCAAGGCCGCTCCCACGGTCAACCTCTTCCCGCCCTCCTCTGAGGA
SPLT1_0029_E06.b : CGTCCTCGGTCAGCCCAAGGCCGCTCCCACGGTCAACCTCTTCCCGCCCTCCTCTGAGGA
20110601C-001471 : GCTCGGCACCAACAAGGCCACCCTGGTGTGTCTAATAAGTGACTTCTACCCGGGCGCCGT
---------+---------+---------+---------+---------+---------+ 539
SPLT1_0070_G05.b : GCTCGGCACCAACAAGGCCACCCTGGTGTGTCTAATAAGTGACTTCTACCCGGGCGCCGT
SPLT1_0072_G11.b : GCTCGGCACCAACAAGGCCACCCTGGTGTGTCTAATAAGTGACTTCTACCCGGGCGCCGT
SPLT1_0031_B02.b : GCTCGGCACCAACAAGGCCACCCTGGTGTGTCTAATAAGTGACTTCTACCCGGGCGCCGT
SPLT1_0029_E06.b : GCTCGGCACCAACAAGGCCACCCTGGTGTGTCTAATAAGTGACTTCTACCCGGGCGCCGT
20110601C-001471 : GACGGTGACCTGGAAGGCAGGCAGCACCACCGTCACCCAGGGCGTGGAGACCACCAAGCC
---------+---------+---------+---------+---------+---------+ 599
SPLT1_0070_G05.b : GACGGTGACCTGGAAGGCAGGCAGCACCACCGTCACCCAGGGCGTGGAGACCACCAAGCC
SPLT1_0072_G11.b : GACGGTGACCTGGAAGGCAGGCAGCACCACCGTCACCCAGGGCGTGGAGACCACCAAGCC
SPLT1_0031_B02.b : GACGGTGACCTGGAAGGCAGGCGGCACCACCGTCACCCAGGGCGTGGAGACCACCAAGCC
SPLT1_0029_E06.b : GACGGTGACCTGGAAGGCAGGCGGCACCACCGTCACCCAGGGCGTGGAGACCACCAAGCC
20110601C-001471 : CTCGAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTACCTGGCCCTGTCCGCCAGTGA
---------+---------+---------+---------+---------+---------+ 659
SPLT1_0070_G05.b : CTCGAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTACCTGGCCCTGTCCGCCAGTGA
SPLT1_0072_G11.b : CTCGAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTACCTGGCCCTGTCCGCCAGTGA
SPLT1_0031_B02.b : CTCGAAACAGAGCAAACAACAGTACGCGGCCAGCAGCTACCTGGCCCTGTCCGCCAGTGA
SPLT1_0029_E06.b : CTCGAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTACCTGGCCCTGTCCGCCAGTGA
20110601C-001471 : CTGGAAATCTTCCAGCGGCTTCACCTGCCAGGTCACCCACGAGGGGACCATTGTGGAGAA
---------+---------+---------+---------+---------+---------+ 719
SPLT1_0070_G05.b : CTGGAAATCTTCCAGCGGCTTCACCTGCCAGGTCACCCACGAGGGGACCATTGTGGAGAA
SPLT1_0072_G11.b : CTGGAAATCTTCCAGCGGCTTCACCTGCCAGGTCACCCACGAGGGGACCATTGTGGAGAA
SPLT1_0031_B02.b : CTGGAAATCTTCCAGCGGCTTCACCTGCCANGTCACCCACGAGGGGACCATTGTGGGAGA
SPLT1_0029_E06.b : CTGGAAATCTTCCAGCGGCTTCACCTGCCAGGTCACCCACGAGGGGACCATTGTGGAGAA
20110601C-001471 : GACAGTGACGCCCTCCGAGTGCGCCTAGGTCCCTGGGCCCCCACCCTCAGGGGCCTGGAG
---------+---------+---------+---------+---------+---------+ 779
SPLT1_0070_G05.b : GACAGTGACGCCCTCCGAGTGCGCCTAGGTCCCTGGGCCCCCACCCTCAGGGGCCTGGAG
SPLT1_0072_G11.b : GACAGTGACGCCCTCCGAGTGCGCCTAGGTCCCTGGGCCCCCACCCTCAGGGGCCTGGAG
SPLT1_0031_B02.b : GACAGTGACGCCCTCCGAGTGCGCCTAGGTCCCTGGGCCCC*ACCCTCAGGGGCCTGGAG
SPLT1_0029_E06.b : GACAGTGACGCCCTCCGAGTGCGCCTAGGTCCCTGGGCCCCCACCCCTCAGGGGCCTGGA
20110601C-001471 : CCACAGGACCCCCGCGAGGGTCTCCCCGCG*CCCCTGGTCCAGCCAGCCCCTCCTCCTGC
---------+---------+---------+---------+---------+---------+ 838
SPLT1_0070_G05.b : CCACAGGACCCCCGCGAGGGTCTCCCCGCG*CCCCccaagaacccccgacgaaaccacac
SPLT1_0072_G11.b : CCACAGGACCCCCGCGAGGGTCTCCCCGCG*ACCCTGGTCCAGCCAGCCCNTCCTCCTGC
SPLT1_0031_B02.b : CCACAG*ACCCCCGCGAGGGTCTCCCgcaacctgggtcaccccaaccctcctctgcactg
SPLT1_0029_E06.b : CCCCAGGAACCCCGCGAGGGTCTCCCCGCGACCCCTGGTCAAGCCCAGCCCTTCTTCTGC
20110601C-001471 : ACCTGTCAACTCCCAATAAACCGTCCTCCTTGTCTTTTAAAAAAAAAAAAAAAAA.....
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : tggatggatgatggaaacataaaacggagtttaactggganannnnnanannannnnnnn
SPLT1_0072_G11.b : ACCTGTCAACTCCCAATAAACCGTCCTCCTTGTCATTTCAGAAAAAAAAAAAAAA
SPLT1_0031_B02.b : taacttcaataaacgtcctcttgtcatcaaaaaaaaaaa
SPLT1_0029_E06.b : ACCTGGTAACTCCCAATAAACCGTCCTCCTGTCCTTCAAAAAAAAAAAAA
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : aaannanaaaaannngggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxatttaac
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : aaacattggtttttttttgtttcggtcgggggaggtggtgaggtttttctcataaaaacc
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : ccacacccgggaaggggttttgattgggcctttccttcccccaaagatcccgccggggtt
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : gggggggagggtttctccttgggggtattgtttcccaaaggggaacgagaaaatgtgcaa
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : ggcccaaggcaaaaaaagccggtgttgttttggcccccccaaacaaaacccctggggggc
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : gccgaaaaaaantttccaaaccctgctgttgccctaaagctcttctgagggttttacttt
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : ttgttttgtggggacccccccctcnccccccccccccccnaaannnngtcacattcacca
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : ctcccgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :
20110601C-001471 : ............................................................
---------+---------+---------+---------+---------+---------+ 893
SPLT1_0070_G05.b : nnnnnnnnnnnnnnn
SPLT1_0072_G11.b :
SPLT1_0031_B02.b :
SPLT1_0029_E06.b :