Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-001610

Sequence: [FASTA format sequence] CATCAGAGCC GCTGTCGCAG CCGGGTGCAG ACAGATTCAG GACCTGGAGA TCCCGTCGGT GGAGGTGGAC CCCTGCGGAG ACGCCCAGGC GGCCGCGGAA GGAGCGGTGC TCGGGCTCTA CGAGTACGAC GAGCTGAAGC AGAAAAAGAA GGTGGTCGTG TCGGCCAAGC TCCACGGAAG TGGGGATCAG GAGGCCTGGC AGAGGGGTGT CCTCTTTGCT TCTGGGCAGA ACCTGGCACG CCACCTGATG GAGACGCCCG CCAATGAGAT GACGCCAACC AGATTTGCTG AAGTTATTGA GAAGAATCTC AAAAGTGCCA GCAGTAAAAC AGACGTCCAC ATCAGACCCA AGTCTTGGAT TGAGGAACAG GAAATGGGAT CATTCCTGAG TGTGGCCAAA GGGTCCGAAG AGCCTCCAGT CTTCCTGGAA ATTCACTACA AAGGCAGCCC AGACGCAAGT GACCCACCCC TGGTGTTTGT CGGGAAGGGA ATTACCTTTG ACAGTGGCGG CATCTCTATC AAGGCGTCTG CGAACATGGA CCTCATGAGG GCGGACATGG GCGGAGCTGC CACCATCTGT TCCACCATCG TGTCTGCTGC CAAGCTCGAC CTGCCCATCA ACCTCGTCGG TTTGGCCCCT CTTTGTGAAA ACATGCCCAG CGGGAAGGCC AACAAGCCTG GGGATGTCGT TAGAGCCAAG AACGGGAAGA CCATCCAGGT GGACAACACC GACGCCGAGG GCAGACTCAT CCTGGCCGAC GCGCTCTGCT ACGCGCACAC TTTTAACCCA AAGGTCATCA TCAATGCCGC CACCCTGACA GGTGCCATGG ATATAGCTTT GGGATCCGGT GCCACTGGGG TCTTTACCAA TTCTTCCTGG CTGTGGAACA AGCTCTTCGA GGCCAGCATT GAAACGGGAG ACCGGGTCTG GAGGATGCCC CTCTTTGAAC ACTACACTAA ACAGATTGTA GATTGCCAGC TTGCTGATGT TAATAACATT GGGAAATACA GATCTGCAGG AGCATGTACC GCTGCAGCGT TCCTGAAAGA ATTTGTGACT CATCCTAAGT GGGCGCACTT GGACATAGCG GGTGTGATGA CCAACAAAGA CGAGGTTCCG TACCTGCGCA AAGGCATGGC GGGGAGGCCC ACGAGGACCC TCATCGAGTT CCTGCTTCGG TTCAGTCAGG ACAGTGCTTA GTTCAGAGGG TCTAAAATTC CCTCCTTCTG TCTGAAATGG GCAGTAGAGC TCCAGAATAC TTTTGAATGA TCATCTTTTA AGGGAAACAG AGGATGGTAT TTTAAACCGT AAAACGAAAT TTGTGTGCCT CAATTTGTTT TTTTCATTTT ATGCAGAGAT TTATAAAGGT AAAGCTAATA TCTTTGCTTG GAAGAGATTT TTTTGAAATA GTCTGTGAAA TGATTTTTTT TAAAAGCTCC CTAATCGGTT TTCAGAGTGG ATGTTTGTAA ATGAGGAACA AAATTGTATT

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
LAP3 cytosol aminopeptidase [Homo sapiens]. 764 0.0

NPEPL1 probable aminopeptidase NPEPL1 isoform 3 [Homo sapiens]. 139 7e-33

NPEPL1 probable aminopeptidase NPEPL1 isoform 2 [Homo sapiens]. 139 7e-33

NPEPL1 probable aminopeptidase NPEPL1 isoform 1 [Homo sapiens]. 139 7e-33

Locus	Definition	Score	E value
LAP3	cytosol aminopeptidase [Homo sapiens].	764	0.0
NPEPL1	probable aminopeptidase NPEPL1 isoform 3 [Homo sapiens].	139	7e-33
NPEPL1	probable aminopeptidase NPEPL1 isoform 2 [Homo sapiens].	139	7e-33
NPEPL1	probable aminopeptidase NPEPL1 isoform 1 [Homo sapiens].	139	7e-33

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Lap3 cytosol aminopeptidase [Mus musculus]. 757 0.0

Npepl1 probable aminopeptidase NPEPL1 [Mus musculus]. 137 3e-32

		Locus	Definition	Score	E value	FL
		Lap3	cytosol aminopeptidase [Mus musculus].	757	0.0
		Npepl1	probable aminopeptidase NPEPL1 [Mus musculus].	137	3e-32

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC479081 PREDICTED: similar to leucine aminopeptidase [Canis familiaris]. 752 0.0

LOC485946 PREDICTED: similar to aminopeptidase-like 1 [Canis familiaris]. 125 1e-28

		Locus	Definition	Score	E value	FL
		LOC479081	PREDICTED: similar to leucine aminopeptidase [Canis familiaris].	752	0.0
		LOC485946	PREDICTED: similar to aminopeptidase-like 1 [Canis familiaris].	125	1e-28

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
LAP3 cytosol aminopeptidase [Bos taurus]. 769 0.0

NPEPL1 probable aminopeptidase NPEPL1 [Bos taurus]. 138 1e-32

		Locus	Definition	Score	E value	FL
		LAP3	cytosol aminopeptidase [Bos taurus].	769	0.0
		NPEPL1	probable aminopeptidase NPEPL1 [Bos taurus].	138	1e-32

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
NCAPG PREDICTED: condensin complex subunit 3 [Sus scrofa]. 322 4e-88

LOC100627689 PREDICTED: cytosol aminopeptidase-like [Sus scrofa]. 292 4e-79

NPEPL1 probable aminopeptidase NPEPL1 [Sus scrofa]. 139 3e-33

LOC100627593 PREDICTED: protein FAM184B-like [Sus scrofa]. 119 3e-27 O

Locus	Definition	Score	E value	FL
NCAPG	PREDICTED: condensin complex subunit 3 [Sus scrofa].	322	4e-88
LOC100627689	PREDICTED: cytosol aminopeptidase-like [Sus scrofa].	292	4e-79
NPEPL1	probable aminopeptidase NPEPL1 [Sus scrofa].	139	3e-33
LOC100627593	PREDICTED: protein FAM184B-like [Sus scrofa].	119	3e-27	O

Assembly Members: 8 TOP

Library Plate Loc. Read Name Accession Full Seq.

ILNT1 0005 F02 ILNT1_0005_F02.b HX227118
ILNT1 0019 G04 ILNT1_0019_G04.b HX228199
LNG01 0109 G04 LNG01_0109_G04.b BP439276
OVR01 0090 A06 OVR01_0090_A06.b BW967343
SMG01 0044 B08 SMG01_0044_B08.b FS717086
SMG01 0073 C09 SMG01_0073_C09.b FS719566
SPL01 0077 G04 SPL01_0077_G04.b CJ019983
TCH01 0082 A04 TCH01_0082_A04.b CJ028344 AK399346

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
574 C 3 0 0.500 W S ACC/T
T 3 0 0.500 ACT/T

Alignment: TOP

20110601C-001610 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
TCH01_0082_A04.b : nnnnggctagtgacttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0109_G04.b :    nnnnnggctggacttgacagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b :                                                             
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : ....................CATCAGAGCCGCTGTCGCAGCCGGGTGCAGACAGATTCAG
                   ---------+---------+---------+---------+---------+---------+ 40
TCH01_0082_A04.b : xxxxxxxxxxxxxxxxxxxxCATCAGAGCCGCTGTCGCAGCCGGGTGCAGACAGATTCAG
LNG01_0109_G04.b : xxxxxxxxxxxxxxxxxxxxxxTCAGAGCCGCTGTCGCAGCCGGGTGCAGACAGATTCAG
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b :                                                             
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : GACCTGGAGATCCCGTCGGTGGAGGTGGACCCCTGCGGAGACGCCCAGGCGGCCGCGGAA
                   ---------+---------+---------+---------+---------+---------+ 100
TCH01_0082_A04.b : GACCTGGAGATCCCGTCGGTGGAGGTGGACCCCTGCGGAGACGCCCAGGCGGCCGCGGAA
LNG01_0109_G04.b : GACCTGGAGATCCCGTCGGTGGAGGTGGACCCCTGCGGAGACGCCCAGGCGGCCGCGGAA
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b :                                                             
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : GGAGCGGTGCTCGGGCTCTACGAGTACGACGAGCTGAAGCAGAAAAAGAAGGTGGTCGTG
                   ---------+---------+---------+---------+---------+---------+ 160
TCH01_0082_A04.b : GGAGCGGTGCTCGGGCTCTACGAGTACGACGAGCTGAAGCAGAAAAAGAAGGTGGTCGTG
LNG01_0109_G04.b : GGAGCGGTGCTCGGGCTCTACGAGTACGACGAGCTGAAGCAGAAAAAGAAGGTGGTCGTG
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b :                                                             
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : TCGGCCAAGCTCCACGGAAGTGGGGATCAGGAGGCCTGGCAGAGGGGTGTCCTCTTTGCT
                   ---------+---------+---------+---------+---------+---------+ 220
TCH01_0082_A04.b : TCGGCCAAGCTCCACGGAAGTGGGGATCAGGAGGCCTGGCAGAGGGGTGTCCTCTTTGCT
LNG01_0109_G04.b : TCGGCCAAGCTCCACGGAAGTGGGGATCAGGAGGCCTGGCAGAGGGGTGTCCTCTTTGCT
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b :                                                             
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : TCTGGGCAGAACCTGGCACGCCACCTGATGGAGACGCCCGCCAATGAGATGACGCCAACC
                   ---------+---------+---------+---------+---------+---------+ 280
TCH01_0082_A04.b : TCTGGGCAGAACCTGGCACGCCACCTGATGGAGACGCCCGCCAATGAGATGACGCCAACC
LNG01_0109_G04.b : TCTGGGCAGAACCTGGCACGCCACCTGATGGAGACGCCCGCCAATGAGATGACGCCAACC
OVR01_0090_A06.b :         nnnggctaggactatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b :                                                             
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : AGATTTGCTGAAGTTATTGAGAAGAATCTCAAAAGTGCCAGCAGTAAAACAGACGTCCAC
                   ---------+---------+---------+---------+---------+---------+ 340
TCH01_0082_A04.b : AGATTTGCTGAAGTTATTGAGAAGAATCTCAAAAGTGCCAGCAGTAAAACAGACGTCCAC
LNG01_0109_G04.b : AGATTTGCTGAAGTTATTGAGAAGAATCTCAAAAGTGCCAGCAGTAAAACAGACGTCCAC
OVR01_0090_A06.b : xxxxxxxxxxxxxxxxxxxxxxxGAATCTCAAAAGTGCCAGCAGTAAAACAGACGTCCAC
SPL01_0077_G04.b :                       ngggctaggactataacxxxxxxxxxxxxxxxxxxxxx
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b :                                                             
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : ATCAGACCCAAGTCTTGGATTGAGGAACAGGAAATGGGATCATTCCTGAGTGTGGCCAAA
                   ---------+---------+---------+---------+---------+---------+ 400
TCH01_0082_A04.b : ATCAGACCCAAGTCTTGGATTGAGGAACAGGAAATGGGATCATTCCTGAGTGTGGCCAAA
LNG01_0109_G04.b : ATCAGACCCAAGTCTTGGATTGAGGAACAGGAAATGGGATCATTCCTGAGTGTGGCCAAA
OVR01_0090_A06.b : ATCAGACCCAAGTCTTGGATTGAGGAACAGGAAATGGGATCATTCCTGAGTGTGGCCAAA
SPL01_0077_G04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCATTCCTGAGTGTGGCCAAA
SMG01_0044_B08.b :                                                  nnggtttttnn
SMG01_0073_C09.b :                                                             
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : GGGTCCGAAGAGCCTCCAGTCTTCCTGGAAATTCACTACAAAGGCAGCCCAGACGCAAGT
                   ---------+---------+---------+---------+---------+---------+ 460
TCH01_0082_A04.b : GGGTCCGAAGAGCCTCCAGTCTTCCTGGAAATTCACTACAAAGGCAGCCCAGACGCAAGT
LNG01_0109_G04.b : GGGTCCGAAGAGCCTCCAGTCTTCCTGGAAATTCACTACAAAGGCAGCCCAGACGCAAGT
OVR01_0090_A06.b : GGGTCCGAAGAGCCTCCAGTCTTCCTGGAAATTCACTACAAAGGCAGCCCAGACGCAAGT
SPL01_0077_G04.b : GGGTCCGAAGAGCCTCCAGTCTTCCTGGAAATTCACTACAAAGGCAGCCCAGACGCAAGT
SMG01_0044_B08.b : nnnnggctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGT
SMG01_0073_C09.b :           nccctttttnnnnggactaagcagcxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : GACCCACCCCTGGTGTTTGTCGGGAAGGGAATTACCTTTGACAGTGGCGGCATCTCTATC
                   ---------+---------+---------+---------+---------+---------+ 520
TCH01_0082_A04.b : GACCCACCCCTGGTGTTTGTCGGGAAGGGAATTACCTTTGACAGTGGCGGCATCTCTATC
LNG01_0109_G04.b : GACCCACCCCTGGTGTTTGTCGGGAAGGGAATTACCTTTGACAGTGGCGGCATCTCTATC
OVR01_0090_A06.b : GACCCACCCCTGGTGTTTGTCGGGAAGGGAATTACCTTTGACAGTGGCGGCATCTCTATC
SPL01_0077_G04.b : GACCCACCCCTGGTGTTTGTCGGGAAGGGAATTACCTTTGACAGTGGCGGCATCTCTATC
SMG01_0044_B08.b : GACCCACCCCTGGTGTTTGTCGGGAAGGGAATTACCTTTGACAGTGGCGGCATCTCTATC
SMG01_0073_C09.b : xxxxxxxxxxxxxxxggTGTCGGGAAGGGAATTACCTTTGACAGTGGCGGCATCTCTATC
ILNT1_0005_F02.b :                                                             
ILNT1_0019_G04.b :                                                             


20110601C-001610 : AAGGCGTCTGCGAACATGGACCTCATGAGGGCGGACATGGGCGGAGCTGCCACCATCTGT
                   ---------+---------+---------+---------+---------+---------+ 580
TCH01_0082_A04.b : AAGGCGTCTGCGAACATGGACCTCATGAGGGCGGACATGGGCGGAGCTGCCACTATCTGT
LNG01_0109_G04.b : AAGGCGTCTGCGAACATGGACCTCATGAGGGCGGACATGGGCGGAGCTGCCACTATCTGT
OVR01_0090_A06.b : AAGGCGTCTGCGAACATGGACCTCATGAGGGCGGACATGGGCGGAGCTGCCACCATCTGT
SPL01_0077_G04.b : AAGGCGTCTGCGAACATGGACCTCATGAGGGCGGACATGGGCGGAGCTGCCACCATCCGT
SMG01_0044_B08.b : AAGGCGTCTGCGAACATGGACCTCATGAGGGCGGACATGGGCGGAGCTGCCACCATCTGT
SMG01_0073_C09.b : AAGGCGTCTGCGAACATGGACCTCATGAGGGCGGACATGGGCGGAGCTGCCACTATCTGT
ILNT1_0005_F02.b :         nnnnggcagtagaggccgtcgtattaaxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0019_G04.b :         nnccgcaggtagaggccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-001610 : TCCACCATCGTGTCTGCTGCCAAGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT
                   ---------+---------+---------+---------+---------+---------+ 640
TCH01_0082_A04.b : TCCACCATCGTGTCTGCTGCCAAGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT
LNG01_0109_G04.b : TCCACCATCGTGTCTGCTGCCAAGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT
OVR01_0090_A06.b : TCCACCATCGTGTCTGCTGCCAAGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT
SPL01_0077_G04.b : TCCACCATCGTGTCTGCTGCCAAGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT
SMG01_0044_B08.b : TCCACCATCGTGTCTGCTGCCAAGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT
SMG01_0073_C09.b : TCCACCATCGTGTCTGCTGCCAAGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT
ILNT1_0005_F02.b : xxxxxtgTCGTGTCTGCTGCCAAGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT
ILNT1_0019_G04.b : xxxxxtgTCGTGTCTGCTGCCATGCTCGACCTGCCCATCAACCTCGTCGGTTTGGCCCCT


20110601C-001610 : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG
                   ---------+---------+---------+---------+---------+---------+ 700
TCH01_0082_A04.b : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG
LNG01_0109_G04.b : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG
OVR01_0090_A06.b : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG
SPL01_0077_G04.b : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG
SMG01_0044_B08.b : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG
SMG01_0073_C09.b : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG
ILNT1_0005_F02.b : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG
ILNT1_0019_G04.b : CTTTGTGAAAACATGCCCAGCGGGAAGGCCAACAAGCCTGGGGATGTCGTTAGAGCCAAG


20110601C-001610 : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC
                   ---------+---------+---------+---------+---------+---------+ 760
TCH01_0082_A04.b : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC
LNG01_0109_G04.b : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC
OVR01_0090_A06.b : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC
SPL01_0077_G04.b : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC
SMG01_0044_B08.b : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC
SMG01_0073_C09.b : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC
ILNT1_0005_F02.b : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC
ILNT1_0019_G04.b : AACGGGAAGACCATCCAGGTGGACAACACCGACGCCGAGGGCAGACTCATCCTGGCCGAC


20110601C-001610 : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATCAATGCCGCCACCCTGACA
                   ---------+---------+---------+---------+---------+---------+ 820
TCH01_0082_A04.b : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATNCATGCCGCCACCCTGACA
LNG01_0109_G04.b : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATCAATGCCGCCACCCTGACA
OVR01_0090_A06.b : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATCAATGCCGCCACCCTGACA
SPL01_0077_G04.b : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATCAATGCCGCCACCCTGACA
SMG01_0044_B08.b : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATCAATGCCGCCACCCTGACA
SMG01_0073_C09.b : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATCAATGCCGCCACCCTGACA
ILNT1_0005_F02.b : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATCAATGCCGCCACCCTGACA
ILNT1_0019_G04.b : GCGCTCTGCTACGCGCACACTTTTAACCCAAAGGTCATCATCAATGCCGCCACCCTGACA


20110601C-001610 : GGTGCCATGGATATAGCTTTGGGATCCGGTGCCACTGGGGTCTTTACCAATTCTTCCTGG
                   ---------+---------+---------+---------+---------+---------+ 880
TCH01_0082_A04.b : GGTGCCATGGATATAGCTTTGGGATCCGGTGCCACTGGGGTCTTTACC*ATTCTTCCTGG
LNG01_0109_G04.b : GGTGCCATGGATATAGCTTTGGGATCCCGGTGCACTGGGGTCTTTACC*ATTCTTCCTGG
OVR01_0090_A06.b : GGTGCCATGGATATAGCTTTGGGATCCGGTGCCACTGGGGTCTTTACCAATTCTTCCTGG
SPL01_0077_G04.b : GGTGCCATGGATATAGCTTTGGGATCCGGTGCCGCTGGGGTCTTTACCAATTCTTCCTGG
SMG01_0044_B08.b : GGTGCCATGGATATAGCTTTGGGATCCGGTGCCACTGGGGTCTTTACCAATTCTTCCTGG
SMG01_0073_C09.b : GGTGCCATGGATATAGCTTTGGGATCCGGTGCCACTGGGGTCTTTACCAATTCTTCCTGG
ILNT1_0005_F02.b : GGTGCCATGGATATAGCTTTGGGATCCGGTGCCACTGGGGTCTTTACCAATTCTTCCTGG
ILNT1_0019_G04.b : GGTGCCATGGATATAGCTTTGGGATCCGGTGCCACTGGGGTCTTTACCAATTCTTCCTGG


20110601C-001610 : CTGTGGAACAAGCTCTTCGAGGCCAGCATTGAAACGGGAGACCGGGTCTGGAGGATGCCC
                   ---------+---------+---------+---------+---------+---------+ 940
TCH01_0082_A04.b : CTGTGGAACA*GCTCTTCGAGGCCAGCATTGA*ACGGGAGACCGGGTCTGGGAGATGCCC
LNG01_0109_G04.b : CTGTGGAACAgctcttcgaggcagcattgaacgggagacgggtctggangatgcccctct
OVR01_0090_A06.b : CTGTGGAACAAGCTCTTCGAGGCCAGCATTGAAACGGGAGACCGGGTCTGGAGGATGCCC
SPL01_0077_G04.b : CTGTGGAACAAGCTCTTCGAGGCCAGCATTGAAACGGGAGACCGGGTCTGGAGGATGCCC
SMG01_0044_B08.b : CTGTGGAACAAGCTCTTCGAGGCCAGCATTGAAACGGGAGACCGGGTCTGGAGGATGCCC
SMG01_0073_C09.b : CTGTGGAACAAGCTCTTCGAGGCCAGCATTGAAACGGGAGACCGGGTCTGGAGGATGCCC
ILNT1_0005_F02.b : CTGTGGAACAAGCTCTTCGAGGCCAGCATTGAAACGGGAGACCGGGTCTGGAGGATGCCC
ILNT1_0019_G04.b : CTGTGGAACAAGCTCTTCGAGGCCAGCATTGAAACGGGAGACCGGGTCTGGAGGATGCCC


20110601C-001610 : CTCTTTGAACACTACACTAAACAGATTGTAGATTGCCAGCTTGCTGATGTTAATAACATT
                   ---------+---------+---------+---------+---------+---------+ 1000
TCH01_0082_A04.b : CTCTTgacactaccctaacagattgtaaatgccagcctgctgatgttataacttgggaaa
LNG01_0109_G04.b : tgacactacactaacagaatgtanattgccagctgctgatgttnatacattgggaataca
OVR01_0090_A06.b : CTCTTTGAACACTACACTAAACAGATTGTAGATTGCCAGCTTGCTGATGTTAATAACATT
SPL01_0077_G04.b : CTCTTTGAACACTACACTAAACAGATTGTAGATTGCCAGCTTGCTGATGTTAATAACATT
SMG01_0044_B08.b : CTCTTTGAACACTACACTAAACAGATTGTAGATTGCCAGCTTTGCTATGTAAAT*ACATT
SMG01_0073_C09.b : CTCTTTGAACACTACACTAAACAGATTGTAGATTGCCAGCTTGCTGATGTTAATAACATT
ILNT1_0005_F02.b : CTCTTTGAACACTACACTAAACAGATTGTAGATTGCCAGCTTGCTGATGTTAATAACATT
ILNT1_0019_G04.b : CTCTTTGAACACTACACTAAACAGATTGTAGATTGCCAGCTTGCTGATGTTAATAACATT


20110601C-001610 : GGGAAATACAGATCTGCAGGAGCATGTACCGCTGCAGCGTTCCTGAAAGAATTTGTGACT
                   ---------+---------+---------+---------+---------+---------+ 1060
TCH01_0082_A04.b : ttcaatctgcaggagctgtacgctgcacgttctcggaaaattgtgaccccccaagtgggg
LNG01_0109_G04.b : gatctgcaggacatgtacgctgcaccgtcctgaaagatttggactcatctagtgggcgca
OVR01_0090_A06.b : GGGAAATACAGATCTGCAGGAGCATGTACCGCTGCAGCGTTCCTGAAAGAATTTGTGACT
SPL01_0077_G04.b : GGGAAATACAGATCTGCAGGAGCATGTACCGCTGCAGCGTTCCTGAAAGAATTTGTGACT
SMG01_0044_B08.b : GGGAAATACAGATCTGCANGAGCATGTACCGCTGCAACGTTCCTGAAAGAATTTGTGACT
SMG01_0073_C09.b : GGGAAATACAGATCTGCAGGAGCATGTACCGCTGCAGCGTTCCTGAAAGAATTTGTGACT
ILNT1_0005_F02.b : GGGAAATACAGATCTGCAGGAGCATGTACCGCTGCAGCGTTCCTGAAAGAATTTGTGACT
ILNT1_0019_G04.b : GGGAAATACAGATCTGCAGGAGCATGTACCGCTGCAGCGTTCCTGAAAGAATTTGTGACT


20110601C-001610 : CATCCT*AAGTGGGCGCACTTGGACATAGCGGGTGTGATGACCAACAAAGACGAGGTTCC
                   ---------+---------+---------+---------+---------+---------+ 1119
TCH01_0082_A04.b : ccctggaactacggtgtgataacaaaaaacaaggtcttactgccaaaagctggcgggggc
LNG01_0109_G04.b : ttggacttacggtgtgagacaacaaaaacaggtcctactgccaaggctggggggagcccc
OVR01_0090_A06.b : CATCCT*AAGTGGGCGCACTTGGACATAGCGGGTGTGATGACCCACAAAGACGAGGTTCC
SPL01_0077_G04.b : CATCCT*AAGTGGGCGCACTTGGACATAGCGGGTGTGATGACCAACAAAGACGAGGTTCC
SMG01_0044_B08.b : CATCCTAAAATGGGCGCACTTGGACCTA*CGGGTGTGATGACCAACAAAGACAGGTTTCC
SMG01_0073_C09.b : CATCCT*AAGTGGGCGCACTTGGACATAGCGGGTGTGATGACCAACAAAGACGAGGTTCC
ILNT1_0005_F02.b : CATCCT*AAGTGGGCGCACTTGGACATAGCGGGTGTGATGACCAACAAAGACGAGGTTCC
ILNT1_0019_G04.b : CATCCT*AAGTGGGCGCACTTGGACATAGCGGGTGTGATGACCAACAAAGACGAGGTTCC


20110601C-001610 : GTACCTGCGCAAAGGCATGGCGGGGAGGCCCACGAGGACCCTCATCGAGTTCCTGCTTCG
                   ---------+---------+---------+---------+---------+---------+ 1179
TCH01_0082_A04.b : cccaggaacccctcagttccgcttgttcttcgggagggctattcaaggtcaaatcccctc
LNG01_0109_G04.b : aagaactcctcagtctgctcgttctccggaaggcttatcaagggtaattccccttgttaa
OVR01_0090_A06.b : GTACCTGCGCAAAGGCATGGCGGGGAGGCCCACAA*GACCCTCATCGAGTTCCTGCTTCG
SPL01_0077_G04.b : GTACCTGCGCAAAGGCATGGCGGGGAGGCCCACAAGGACCCTCATCGAGTTCCTGCTTCG
SMG01_0044_B08.b : GTAACTGCCCAAAAGCATGGCGGGGAaagcccccaaggaacctcatccaaatcccgcctc
SMG01_0073_C09.b : GTACCTGCGCAAAGGCATGGCGGGGAGGCCCACGAGGACCCTCATCGAGTTCCTGCTTCG
ILNT1_0005_F02.b : GTACCTGCGCAAAGGCATGGCGGGGAGGCCCACGAGGACCCTCATCGAGTTCCTGCTTCG
ILNT1_0019_G04.b : GTACCTGCGCAAAGGCATGGCGGGGAGGCCCACGAGGACCCTCATCGAGTTCCTGCTTCG


20110601C-001610 : GTTCAGTCAGGACAGTGCTT*AGTTCAGAGGGTCTAAAATTCCCTCCTTCTGTCTGAAAT
                   ---------+---------+---------+---------+---------+---------+ 1238
TCH01_0082_A04.b : ttccaaaggcggagcaccaaacttttt                                
LNG01_0109_G04.b : aggcggaaccccaacttttagtccttagggacaggagtttaccgaaaaattgggcctttt
OVR01_0090_A06.b : GTTCAGTCAGGACAGTGCTTTAGTTCAGAGGGTCTAAAAATCCGTCATTCTGTCTGAAAT
SPL01_0077_G04.b : GTTCAGTCAGGACAGTGCTT*AGTTCAAAGGGCCTAAAATTCCGTCATTCTGTCTGAAAG
SMG01_0044_B08.b : cgttcagtccggacaaggcttaaaacgaagggccaaaattccccccttcggtcgaaaagg
SMG01_0073_C09.b : GTTCAGTCAGGACAGTGCTT*AGTTCAGAGGGTCTAAAATTCCCTCCTTCTGTCTGAAAT
ILNT1_0005_F02.b : GTTCAGTCAGGACAGTGCTT*AGTTCAGAGGGTCTAAAATTCCCTCCTTCTGTCTGAAAT
ILNT1_0019_G04.b : GTTCAGTCAGGACAGTGCTT*AGTTCAGAGGGTCTAAAATTCCCTCCTTCTGTCTGAAAT


20110601C-001610 : GGGCAGTAGAGCTCCAGAATACTTTTGAATGATCATCTTTTAAGGGAAACAGAGGATGGT
                   ---------+---------+---------+---------+---------+---------+ 1298
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b : ttttttccattaagaacaactttgaatttgaacgagtttaccctctcggttgggattttt
OVR01_0090_A06.b : GGGCAGTAGAGCTCCAaatactttttgaatgaaagatcatcctttaagggaaacaaagga
SPL01_0077_G04.b : GGGCAGTAGACCCCCAGAATCCTTTTGAATGAaagatcatccttttaagaaaaacagaga
SMG01_0044_B08.b : gcaataaaactcccaaaacttttaaaagaaaaattcctttttagggaaaaaaaaagggtt
SMG01_0073_C09.b : GGGCAGTAGAGCTCCAGAATACTTTTGAATGATCATCTTTTAAGGGAAACAGAAGATGGT
ILNT1_0005_F02.b : GGGCAGTAGAGCTCCAGAATACTTTTGAATGATCATCTTTTAAGGGAAACAGAGGATGGT
ILNT1_0019_G04.b : GGGCAGTAGAGCTCCAGAATACTTTTGAATGATCATCTTTTAAGGGAAACAGAGGATGGT


20110601C-001610 : ATTTTAAACCGTAAAACGAAATTTGTGTGCCTCAATTTGTTTTTTTCATTTTATGCAGAG
                   ---------+---------+---------+---------+---------+---------+ 1358
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b : ggagaggggtgaaacntaaaaaaaaaannnccctccgtttcttgttt            
OVR01_0090_A06.b : tggtatttttaaccataaaacgaaatttgtggggcccaatttgttttttttcatttttgg
SPL01_0077_G04.b : atggtatttttaaaccttaaaacgaaattttgggggccccaatttggttttttttccatt
SMG01_0044_B08.b : ttttaacccttaaaaaaaattttgggcccccattttttttttttctttttcgccaatttt
SMG01_0073_C09.b : ATTTTAAA*CGTAAAACGA*ATTTGTGGTGCTCAATTTGGTTTTTTCATTTTATGCAAAG
ILNT1_0005_F02.b : ATTTTAAACCGTAAAACGAAATTTGTGTGCCTCAATTTGTTTTTTTCATTTTATGCAGAG
ILNT1_0019_G04.b : ATTTTANACCGTAAAACGAAATTTGTGTGCCTCAATTTGTTTTTTTCATTTTATGCAGAG


20110601C-001610 : ATTTATAAAGGTAAAGCTAATATCTTTGCTTGGAAGAGA*TTTTTTTGAAATAGTCTGTG
                   ---------+---------+---------+---------+---------+---------+ 1417
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b : ccaaaatttttaaaggtaaagcttaatttctttctttggaagaaatatttttttgaaaaa
SPL01_0077_G04.b : tatgccaaaaatttttaaggggtaaggctaatttttttgcttggaaaaaaaatttttttt
SMG01_0044_B08.b : aaagggggaccttttttttttcttgaaaaaaatttttttaaaaaacctggaaaaaatttt
SMG01_0073_C09.b : ATTTATAAGGGTA*AGCTAATATCTTTGGCTGGAAGAGATTTTTTTgaaataatctggta
ILNT1_0005_F02.b : ATTTATAAAGGTAAAGCTAATATCTTTGCTTGGAAGAAAATTTTTTTGAAATAGTCTGTG
ILNT1_0019_G04.b : ATTTATAAAGGTAAAGCTAATATCTTTGCTTGGAAGAGA*TTTTTTTGAGATAGTCTGTG


20110601C-001610 : AAA*TGATTTTTTTTAAAAGCTCCCTAATCGGTTTTCAGAGTGGATGTTTGTAAATGAGG
                   ---------+---------+---------+---------+---------+---------+ 1476
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b : atcttgggaatggatttttttttaa                                  
SPL01_0077_G04.b : aaaaatagccggggaaaaggatttttttttaaaagcccccctaaatcgggtttttaaaat
SMG01_0044_B08.b : tttaaaaaccccaaaggtttttaaaaaggttttttttttaaggaaaaatttttttttaat
SMG01_0073_C09.b : aatgatttttttaaaacctcccaaaccggttttcaaatggatgtttgaaatgaggagcaa
ILNT1_0005_F02.b : AAATTGATTTTTTTTAAAAGCTCCCTAATCGGTTTTCAGAGTGGATGTTGGTAtttgagg
ILNT1_0019_G04.b : AAA*TGATTTTTTTTNAAAGCTCCCTAA*CGGTTTTCAGAGTGTATGTTTGTAAATGAGG


20110601C-001610 : AACAAAATTGTATT..............................................
                   ---------+---------+---------+---------+---------+---------+ 1490
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b : gggg                                                       
SMG01_0044_B08.b : ttttggggggggaaaaaaaaaaaaaatttttggttttttttaaaaaaaaaatcctttttt
SMG01_0073_C09.b : aatgtaattcgaatttggatgtgggaaattaaacagggaattgctgtgcattgccaaaaa
ILNT1_0005_F02.b : aagcaatttggaatttcaaatttgtgatgctgggaaaattaacagtggaattgctgtggc
ILNT1_0019_G04.b : AACAAAATTGTATTtcagatttgtgatgctggggatatgaacaggaaattgctgtggcat


20110601C-001610 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1490
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b : tttaaaaaaaaaaaaaaaaaactttttttttttttgggggcccccctttataaaattggg
SMG01_0073_C09.b : aataacccaatttttgggtaaaaaaanannnananaaaagnanaaaaaaaaagggggcct
ILNT1_0005_F02.b : attggtcagaacaaaaaatcaaacttttttggcaaananaaaaaaaaaaaaaataacaaa
ILNT1_0019_G04.b : tggtcaaaacaaataatctcactttttgtgccgaaaaanagaaaaacaaaaaaaaaaaaa


20110601C-001610 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1490
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b : gggggaaataaacacactctttttttttttagggccccccaaaagaaaaaaaaaaaacgc
SMG01_0073_C09.b : tgttctcaattagggtgcgcgcctctaaatcccccgggggcccagttaacaacccttttt
ILNT1_0005_F02.b : aaagaaacaaagcacgccaaaaacngnnngccccggggccgcgggcacccctactccggg
ILNT1_0019_G04.b : gcaacaaaaaccccggcccgggacctctcttagaggcggttatgggtcctaaatgcaaat


20110601C-001610 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1490
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b : gc                                                         
SMG01_0073_C09.b : ttgaaaagggccctagagggcaataaaaaaagaggggccctttttaacccgggggaaaac
ILNT1_0005_F02.b : tgaaggggttccggcacaccatattatatttgtgttgggaaattcacaaacaaccaagag
ILNT1_0019_G04.b : accctggttgacttgacatgcccacttaagcgctgttaaagagctcttatagaatattga


20110601C-001610 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1490
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b : ttctggtgtttttaaaaaactttcgtggggaaatgggaaacccccaaattcccgcggaaa
ILNT1_0005_F02.b : agaaaacctcaatggtgacatgcagagcgccgtcctttttatacatgatcacgacaacag
ILNT1_0019_G04.b : ctttatgtttttttcgcactttattagtctcttaagtttcaacctctatgtatccttatt


20110601C-001610 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1490
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b : atatttgttggggtacaccccccgccgggatgtccggaaataaaaaaagagaatttttgt
ILNT1_0005_F02.b : acagcttccaatactctatttttcttttttatatccggggggggggaggggtctattata
ILNT1_0019_G04.b : ttacctccgcgaaggtgggatttatgccgacagataggaccctagaggagggaggtagat


20110601C-001610 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1490
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b : ttattaacccggcgccccgcgttaacccctgttgtttcccccgccaaaagatttgtgaac
ILNT1_0005_F02.b : caagaggaactcctcggccgaacacatagtcctctcacctcctccttatttgccgccccc
ILNT1_0019_G04.b : gtgggctttcgatctctctcttagcttctctttcgcggtgcccatggcgctcatggggtt


20110601C-001610 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1490
TCH01_0082_A04.b :                                                             
LNG01_0109_G04.b :                                                             
OVR01_0090_A06.b :                                                             
SPL01_0077_G04.b :                                                             
SMG01_0044_B08.b :                                                             
SMG01_0073_C09.b : aacctcttcttt                                               
ILNT1_0005_F02.b : ctcacccccaatatatataac                                      
ILNT1_0019_G04.b : gtgtgtctcacggaaaactaaaactagtaatatgtatatttcgctacaccgttgtttg