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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-001772

Length: 961

Sequence [FASTA format sequence]
TGGGTGCAGG GGAAGGGAGG CCGGAGGGAA TGGAGAGGGA CACGGAGAGG CAGTGTGCTC
GGCGGTCCCC CGGATCTGTC TCTTGCTTCA ACAGTGTTTG GACGGAACAG ACCCAGGGAC
GCCCCTTGCT CCAGCCTCCG ACTACCCTCC AACCTTTTTT CCAGTCGCAA CCTTCGGACT
CCGCCTCTCA GCTATCTTCA GTCTCCGGGA CCAGCCAACA CCATTTTTTG AGCTTAGCTC
CTTATTGCCG ACCAGCCATG AGCTCCCAGG TTCGTCAGAA TTATTCCACC GAGGTGGAGG
CCTTCGTCAA CCGCCTGATC AACATGCATC TGCAGGCCTC CTACACCTAC CTCTCTCTGG
GCTTCTATTT CAACCGCGAC GATGTGGCTC TGGAGGGCGT GAGTCATTTT TTTCGCGAAT
TGGCCGAGGA GAAGCGCGAG GGTTCGGAGC GTCTCTTGAA AATGCAAAAC CAGCGCGGTG
GCCGCGCCCT CTTCCAGGAC GTGCAGAAAC CATCTCAAGA TGAGTGGGGT AAAACCCAGG
ACGCTATGGA AGCCGCCCTT CACTTGGAGA AGGGACTGAA CCAGGCTCTT GTGGATCTGC
ATGCGCTGGG TTCTGCCCGC GCAGACCCCC ACCTCTGTGA CTTCCTGGAG AACCACTTCC
TGGATGAGGA GGTGAAGCTC ATCAAGAAGA TGGGCGACCA CCTGACCAAC CTGCGCAGGC
TCTCTGGTCC CCAGGCTGGG CTGGGCGAGT ACCTCTTCGA AAGGCTCACA CTCAAGCACG
ACTAGGAATC TCTGGGAGCC AGGGGCCTTG GAGGCGCTCC TCTGGGTGCT GGGCTTTCTG
CGGAAAGCCC TTTCTGCAGC CACGAAGCAC CATTCTTAAC ACCCTGGAGC CCTCTCCCAA
GTCTTGGACC AAATGGAAAC AATAAAAGCT TTTTGCAGCA AAAAAAAAAA AAAAAAAAAA
A


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFTLferritin light chain [Homo sapiens]. 3132e-85O
Contig/Assembly ProteinFTH1ferritin heavy chain [Homo sapiens]. 2118e-55O
Contig/Assembly ProteinFTMTferritin, mitochondrial precursor [Homo sapiens]. 1971e-50O
Contig/Assembly ProteinFTHL17ferritin heavy polypeptide-like 17 [Homo sapiens]. 1823e-46O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFtl1ferritin light chain 1 [Mus musculus]. 3046e-83O
Contig/Assembly ProteinLOC434624PREDICTED: ferritin light chain 1-like [Mus musculus]. 2817e-76O
Contig/Assembly ProteinFth1ferritin heavy chain [Mus musculus]. 2124e-55O
Contig/Assembly ProteinFtmtferritin, mitochondrial precursor [Mus musculus]. 1971e-50O
Contig/Assembly ProteinGm5635ferritin, heavy polypeptide-like [Mus musculus]. 1553e-38O
Contig/Assembly ProteinGm14511hypothetical protein LOC434727 [Mus musculus]. 1532e-37O
Contig/Assembly ProteinGm5634hypothetical protein LOC434726 [Mus musculus]. 1523e-37O
Contig/Assembly ProteinFthl17ferritin heavy polypeptide-like 17 [Mus musculus]. 1472e-35O
Contig/Assembly ProteinGm14458hypothetical protein LOC100042782 [Mus musculus]. 1462e-35O
Contig/Assembly ProteinGm14499PREDICTED: ferritin heavy polypeptide-like 17-like [Mus musculus]. 1448e-35O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFTLferritin light chain [Canis lupus familiaris]. 3271e-89O
Contig/Assembly ProteinLOC479746PREDICTED: similar to Ferritin light chain 2 (Ferritin L subunit 2) (Ferritin subunit LG) [Canis familiaris]. 3132e-89O
Contig/Assembly ProteinLOC484507PREDICTED: similar to ferritin light chain 1 [Canis familiaris]. 2693e-72O
Contig/Assembly ProteinLOC609811PREDICTED: similar to Ferritin light chain 1 (Ferritin L subunit 1) [Canis familiaris]. 2684e-72
Contig/Assembly ProteinLOC491829PREDICTED: similar to Ferritin light chain (Ferritin L subunit) [Canis familiaris]. 2563e-68O
Contig/Assembly ProteinLOC608625PREDICTED: similar to ferritin light chain 1 [Canis familiaris]. 2502e-81O
Contig/Assembly ProteinLOC477783PREDICTED: similar to ferritin light chain 1 [Canis familiaris]. 2494e-83O
Contig/Assembly ProteinLOC100499480ferritin, heavy polypeptide 1 [Canis lupus familiaris]. 2111e-54O
Contig/Assembly ProteinFTH1ferritin heavy chain [Canis lupus familiaris]. 2111e-54O
Contig/Assembly ProteinLOC478376PREDICTED: similar to Ferritin heavy chain (Ferritin H subunit) (Proliferation-inducing gene 15 protein) [Canis familiaris]. 1671e-41O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC788801PREDICTED: ferritin light chain-like [Bos taurus]. 3183e-87O
Contig/Assembly ProteinLOC788801PREDICTED: ferritin light chain-like [Bos taurus]. 3183e-87O
Contig/Assembly ProteinLOC785987PREDICTED: ferritin light chain-like isoform 1 [Bos taurus]. 3183e-87O
Contig/Assembly ProteinLOC782921PREDICTED: ferritin light chain-like [Bos taurus]. 3183e-87O
Contig/Assembly ProteinFTLferritin light chain [Bos taurus]. 3183e-87O
Contig/Assembly ProteinLOC782921PREDICTED: ferritin light chain-like [Bos taurus]. 3092e-84O
Contig/Assembly ProteinLOC784025PREDICTED: ferritin light chain-like [Bos taurus]. 3084e-84O
Contig/Assembly ProteinLOC784025PREDICTED: ferritin light chain-like [Bos taurus]. 3084e-84O
Contig/Assembly ProteinLOC783224PREDICTED: ferritin light chain-like [Bos taurus]. 3053e-96
Contig/Assembly ProteinLOC783224PREDICTED: ferritin light chain-like [Bos taurus]. 3053e-96


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFTLPREDICTED: ferritin light chain isoform 1 [Sus scrofa]. 3538e-98O
Contig/Assembly ProteinFTLPREDICTED: ferritin light chain isoform 2 [Sus scrofa]. 2322e-61O
Contig/Assembly ProteinLOC100524926PREDICTED: ferritin, mitochondrial-like [Sus scrofa]. 1984e-51O
Contig/Assembly ProteinFTH1ferritin heavy chain [Sus scrofa]. 1891e-48O
Contig/Assembly ProteinLOC100154515PREDICTED: ferritin heavy chain-like [Sus scrofa]. 1846e-47
Contig/Assembly ProteinLOC100625618PREDICTED: ferritin heavy chain-like [Sus scrofa]. 1746e-44O
Contig/Assembly ProteinLOC100524231PREDICTED: ferritin heavy chain-like [Sus scrofa]. 1616e-40O
Contig/Assembly ProteinLOC100624737PREDICTED: ferritin heavy chain-like [Sus scrofa]. 1616e-40O
Contig/Assembly ProteinLOC100523709PREDICTED: ferritin-1, chloroplastic-like [Sus scrofa]. 1592e-39
Contig/Assembly ProteinLOC100625302PREDICTED: hypothetical protein LOC100625302 [Sus scrofa]. 1592e-39


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010017B11AMP01_0017_B11.bBW956232 
BMWN10079A12BMWN1_0079_A12.bHX210403 
BMWN10100H10BMWN1_0100_H10.bHX211753 
SMG010045B04SMG01_0045_B04.bFS717170 
SPLT10051H01SPLT1_0051_H01.bHX243177 
UTR010019D11UTR01_0019_D11.bBP171424 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
449A200.333WSGAA/E
G400.667GAG/E


Alignment:      TOP

20110601C-001772 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
UTR01_0019_D11.b : ttxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0079_A12.b :
SPLT1_0051_H01.b :
AMP01_0017_B11.b : nntttactaattatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0100_H10.b :
SMG01_0045_B04.b :
20110601C-001772 : ....................................................TGGGTGCA
---------+---------+---------+---------+---------+---------+ 8
UTR01_0019_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGGGTGCA
BMWN1_0079_A12.b : ttttacacgagtacgaxxxxxxxxxxxxxxxxx
SPLT1_0051_H01.b : ntttaagcaggtagaggxx
AMP01_0017_B11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0100_H10.b : ttttccgagagtagacgxx
SMG01_0045_B04.b : ggctttttnnnggctaaagc
20110601C-001772 : GGGGAAGGGAGGCCGGAGGGAATGGAGAGGGACACGGAGAGGCAGTGTGCTCGGCGGTCC
---------+---------+---------+---------+---------+---------+ 68
UTR01_0019_D11.b : GGGGAAGGGAGGCCGGAGGGAATGGAGAGGGACACGGAGAGCCAGTGTGCTCGGCGGTCC
BMWN1_0079_A12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGCAGTGTGCTCGGCGGTCC
SPLT1_0051_H01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGCAGTGTGCTCGGCGGTCC
AMP01_0017_B11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGTGTGCTCAGCGGTCC
BMWN1_0100_H10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGTGTGCTCGGCGGTCC
SMG01_0045_B04.b : agcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGTGTGCTCGGCGGTCC
20110601C-001772 : CCCGGATCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGACCCAGGGACGCCCCTTG
---------+---------+---------+---------+---------+---------+ 128
UTR01_0019_D11.b : CCCGGATCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGACCCAGGGACGCCCCTTG
BMWN1_0079_A12.b : CCCGGATCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGACCCAGGGACGCCCCTTG
SPLT1_0051_H01.b : CCCGGATCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGACCCAGGGACGCCCCTTG
AMP01_0017_B11.b : CCCGGATCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACACACCCAGGGACGCCCCTTG
BMWN1_0100_H10.b : CCCGGATCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGACCCAGGGACGCCCCTTG
SMG01_0045_B04.b : CCCGGATCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGACCCAGGGACGTCCCTTG
20110601C-001772 : CTCCAGCCTCCGACTACCCTCCAACCTTTTTTCCAGTCGCAACCTTCGGACTCCGCCTCT
---------+---------+---------+---------+---------+---------+ 188
UTR01_0019_D11.b : CTCCAGCCTCCGACTACCCTCCAACCTTTTTTCCAGTCGCAACCTTCGGACTCCGCCTCT
BMWN1_0079_A12.b : CTCCAGCCTCCGACTACCCTCCAACCTTTTTTCCAGTCGCAACCTTCGGACTCCGCCTCT
SPLT1_0051_H01.b : CTCCAGCCTCCGACTACCCTCCAACCTTTTTTCCAGTCGCAACCTTCGGACTCCGCCTCT
AMP01_0017_B11.b : CTCCATCCTCCGACTACCCTCCAACCTTTTTTCCAGTCGCAACCTTCCGACTCCGCCTCT
BMWN1_0100_H10.b : CTCCAGCCTCCGACTACCCTCCAACCTTTTTTCCAGTCGCAACCTTCGGACTCCGCCTCT
SMG01_0045_B04.b : CTCCAGCCTCCGACTACCCTCCAACCTTTTTTCCAGTCGCAACCTTCGGACTCCGCCTCT
20110601C-001772 : CAGCTATCTTCAGTCTCCGGGACCAGCCAACACCATTTTTTGAGCTTAGCTCCTTATTGC
---------+---------+---------+---------+---------+---------+ 248
UTR01_0019_D11.b : CAGCTATCTTCAGTCTCCGGGACCAGCCAACACCATTTTTTGAGCTTAGCTCCTTATTGC
BMWN1_0079_A12.b : CAGCTATCTTCAGTCTCCGGGACCAGCCAACACCATTTTTTGAGCTTAGCTCCTTATTGC
SPLT1_0051_H01.b : CAGCTATCTTCAGTCTCCGGGACCAGCCAACACCATTTTTTGAGCTTAGCTCCTTATTGC
AMP01_0017_B11.b : CAGCTGTCTTCAATCTCCGGGACCAGCCAACACCATTTTTTGAGCTTAGCTCCTTATTGC
BMWN1_0100_H10.b : CAGCTATCTTCAGTCTCCGGGACCAGCCAACACCATTTTTTGAGCTTAGCTCCTTATTGC
SMG01_0045_B04.b : CAGCTATCTTCAGTCTCCGGGACCAGCCAACACCATTTTTTGAGCTTAGCTCCTTATTGC
20110601C-001772 : CGACCAGCCATGAGCTCCCAGGTTCGTCAGAATTATTCCACCGAGGTGGAGGCCTTCGTC
---------+---------+---------+---------+---------+---------+ 308
UTR01_0019_D11.b : CGACCAGCCATGAGCTCCCAGGTTCGTCAGAATTATTCCACCGAGGTGGAGGCCTTCGTC
BMWN1_0079_A12.b : CGACCAGCCATGAGCTCCCAGGTTCGTCAGAATTATTCCACCGAGGTGGAGGCCTTCGTC
SPLT1_0051_H01.b : CGACCAGCCATGAGCTCCCAGGTTCGTCAGAATTATTCCACCGAGGTGGAGGCCTTCGTC
AMP01_0017_B11.b : CGACCAGCCATGAGCTCCCAGGTTCGTCATAATTATTCCACCGAGGTGGAGGCCTTCGTC
BMWN1_0100_H10.b : CGACCAGCCATGAGCTCCCAGGTTCGTCAGAATTATTCCACCGAGGTGGAGGCCTTCGTC
SMG01_0045_B04.b : CGACCAGCCATGAGCTCCCAGGTTCGTCAGAATTATTCCACCGAGGTGGAGGCCTTCGTC
20110601C-001772 : AACCGCCTGATCAACATGCATCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTAT
---------+---------+---------+---------+---------+---------+ 368
UTR01_0019_D11.b : AACCGCCTGATCAACATGCATCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTAT
BMWN1_0079_A12.b : AACCGCCTGATCAACATGCATCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTAT
SPLT1_0051_H01.b : AACCGCCTGATCAACATGCATCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTAT
AMP01_0017_B11.b : AACCGCCTGATCAACATGCATCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTAT
BMWN1_0100_H10.b : AACCGCCTGATCAACATGCATCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTAT
SMG01_0045_B04.b : AACCGCCTGATCAACATGCATCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTAT
20110601C-001772 : TTCAACCGCGACGATGTGGCTCTGGAGGGCGTGAGTCATTTTTTT*CGCGAATTGGCCGA
---------+---------+---------+---------+---------+---------+ 427
UTR01_0019_D11.b : TTCAACCGCGACGATGTGGCTCTGGAGGGCGTGAGTCATTTTTTTTCGCGAATTGGCCGA
BMWN1_0079_A12.b : TTCAACCGCGACGATGTGGCTCTGGAGGGCGTGAGTCATTTTTTT*CGCGAATTGGCCGA
SPLT1_0051_H01.b : TTCAACCGCGACGATGTGGCTCTGGAGGGCGTGAGTCATTTTTTT*CGCGAATTGGCCGA
AMP01_0017_B11.b : TTCAACCGCGACGATGTGGCTCTGGAGGGCGTGAGTCATTTTTTT*CGCGAATTGGCCGA
BMWN1_0100_H10.b : TTCAACCGCGACGATGTGGCTCTGGAGGGCGTGAGTCATTTTTTT*CGCGAATTGGCCGA
SMG01_0045_B04.b : TTCAACCGCGACGATGTGGCTCTGGAGGGCGTGAGTCATTTTTTT*CGCGAATTGGCCGA
20110601C-001772 : GGAGAAGCGCGAGGGTTCGGAGCGTCTCTTGAAAATGCAAAACCAGCGCGGTGGCCGCGC
---------+---------+---------+---------+---------+---------+ 487
UTR01_0019_D11.b : GGAGAAGCGCGAGGGTTCGGAGCGTCTCTTGAAAATGCAAAACCAGCGCGGTGGCCGCGC
BMWN1_0079_A12.b : GGAGAAGCGCGAGGGTTCGGAACGTCTCTTGAAAATGCAAAACCAGCGCGGTGGCCGCGC
SPLT1_0051_H01.b : GGAGAAGCGCGAGGGTTCGGAGCGTCTCTTGAAAATGCAAAACCAGCGCGGTGGCCGCGC
AMP01_0017_B11.b : GGAGAAGCGCGAGGGTTCGGAGCGTCTCTTGAAAATGCAAAACCAGCGCGGTGGCCGCGC
BMWN1_0100_H10.b : GGAGAAGCGCGAGGGTTCGGAACGTCTCTTGAAAATGCAAAACCAGCGCGGTGGCCGCGC
SMG01_0045_B04.b : GGAGAAGCGCGAGGGTTCGGAGCGTCTCTTGAAAATGCAAAACCAGCGCGGTGGCCGCGC
20110601C-001772 : CCTCTTCCAGGACGTGCAGAAACCATCTCAAGATGAGTGGGGTAAAACCCAGGACGCTAT
---------+---------+---------+---------+---------+---------+ 547
UTR01_0019_D11.b : CCTCTTCCAGGACGTGCAGAAACCATCTCAAGATGAGTGGGGTAAAACCCAGGACGCTAT
BMWN1_0079_A12.b : CCTCTTCCAGGACGTGCAGAAACCATCTCAAGATGAGTGGGGTAAAACCCAGGACGCTAT
SPLT1_0051_H01.b : CCTCTTCCAGGACGTGCAGAAACCATCTCAAGATGAGTGGGGTAAAACCCAGGACGCTAT
AMP01_0017_B11.b : CCTCTTCCAGGACGTGCACAAACCATCTCAAGATGAGTGGGGTAAAACCCAGGACGCTAT
BMWN1_0100_H10.b : CCTCTTCCAGGACGTGCAGAAACCATCTCAAGATGAGTGGGGTAAAACCCAGGACGCTAT
SMG01_0045_B04.b : CCCCTTCCAGGACGTGCAGAAACCATCTCAAGATGAGTGGGGTAAAACCCAGGACGCTAT
20110601C-001772 : GGAAGCCGCCCTTCACTTGGAGAAGGGACTGAACCAGGCTCTTGTGGATCTGCATGCGCT
---------+---------+---------+---------+---------+---------+ 607
UTR01_0019_D11.b : GGAAGCCGCCCTTCACTTGGAGAAGGGGCTGAACCAGGCTCTTGTGGATCTGCATGCGCT
BMWN1_0079_A12.b : GGAAGCCGCCCTTCACTTGGAGAAGGGACTGAACCAGGCTCTTGTGGATCTGCATGCGCT
SPLT1_0051_H01.b : GGAAGCCGCCCTTCACTTGGAGAAGGGACTGAACCAGGCTCTTGTGGATCTGCATGCGCT
AMP01_0017_B11.b : GGAAGCCGCCCTTCACTTGGAGAAGGGACTGAACCATGCTCTTGTGGATCTGCATGCGCT
BMWN1_0100_H10.b : GGAAGCCGCCCTTCACTTGGAGAAGGGACTGAACCAGGCTCTTGTGGATCTGCATGCGCT
SMG01_0045_B04.b : GGAAGCCGCCCTTCACTTGGAGAAGGGACTGAACCAGGCTCTTGTGGATCTGCATGCGCT
20110601C-001772 : GGGTTCTGCCCGCGCAGACCCCCACCTCTGTGACTTCCTGG*AGAACCACTTCCTGGATG
---------+---------+---------+---------+---------+---------+ 666
UTR01_0019_D11.b : GGGTTCTGCCCGCGCAGACCCCCACCTCTGTGACTTCCTGG*AGAACCACTTCCTGGATG
BMWN1_0079_A12.b : GGGTTCTGCCCCCGCAGACCCCCACCTCTGTGACTTCCTGGAAGAACCACTTCCTGGATG
SPLT1_0051_H01.b : GGGTTCTGCCCGCGCAGACCCCCACCTCTGTGACTTCCTGG*AGAACCACTTCCTGGATG
AMP01_0017_B11.b : GGGTTCTGCCCGCGCAGACACCCACCTCTGTGACTTCCTGG*AGAACCACTTCCTGCATG
BMWN1_0100_H10.b : GGGTTCTGCCCGCGCAGACCCCCACCTCTGTGACTTCCTGG*AGAACCACTTCCTGGATG
SMG01_0045_B04.b : GGGTTCTGCCCGCGCAGACCCCCACCTCTGTGACTTCCTGG*AGAACCACTTCCTGGATG
20110601C-001772 : AGGAGGTGAAGCTCATCAAGAAGATGGGCGACCACCTGACCAACCTGCGCAGGCTCTCTG
---------+---------+---------+---------+---------+---------+ 726
UTR01_0019_D11.b : AGGAGGTGAAGCTCATCAAGAAGATGGGCGACCACCTGACCAACCTGCGCAGGCTCTCTG
BMWN1_0079_A12.b : AGGAGGTGAAACTCATCAAGAAGATGGGgcgactacctgaaccaacctgcgcaggctttc
SPLT1_0051_H01.b : AGGAGGTGAAGCTCATCAAGAAGATGGGCGACCACCTGACCAACCTGCGCAGGCTCTCTG
AMP01_0017_B11.b : ATGAGGTGAAGCTCATCAAGAACATGGGCGACCACCTGACCAACCTGCGCAAGCTCTCTG
BMWN1_0100_H10.b : AGGAGGTGAAGCTCATCAAGAAGATGGGCGACCACCTGACCAACCTGCGCAGGCTCTCTG
SMG01_0045_B04.b : AGGAGGTGAAGCTCATCAAGAAGATGGGCGACCACCTGACCAACCTGCGCAGGCTCTCTG
20110601C-001772 : GTCCCCAGGCTGGGCTGGGCGAGTACCTCTTCGAAAGGCTCACACTCAAGCACGACTAGG
---------+---------+---------+---------+---------+---------+ 786
UTR01_0019_D11.b : GTCCCCAGGCTGGGCTGGGCGAGTACCTCTTCGAAAGGCTCACACTCAAGCACGACTAGG
BMWN1_0079_A12.b : tggtccgacaggctgggctgggcaattccttcttcaaaagggctcacactccagcccaaa
SPLT1_0051_H01.b : GTCCCCAGGCTGGGCTGGGCGAGTACCTCTTCGAAAGGCTCACACTCAAGCACGACTAGG
AMP01_0017_B11.b : GTCCGCAGGCTGGGCTGGGCAAGTAACTCTTCCAAAGGCTACCACTCAAGCCCGACTAGG
BMWN1_0100_H10.b : GTCCGCAGGCTGGGCTGGGCGAGTACCCTCTCGAAAGGCTCACACTNCAGCACGACTAGG
SMG01_0045_B04.b : GTCCCCAGGCTGGGCTGGGCGAGTACCTCTTCGAAAGGCTCACACTCAAGCACGACTAGG
20110601C-001772 : AATCTCTGGGAGCCAGGGGCCTTGGAGGCGCTCCTCTGGGTGCTGGGCTTTCTGCGGAAA
---------+---------+---------+---------+---------+---------+ 846
UTR01_0019_D11.b : AATCTCTGGAGCCCAGGGGCCTTGGAGGCGCTCCTCTGGTGCCTGGGCTTTCTGCCGGAA
BMWN1_0079_A12.b : taagaaatctctggaaccccgggggccttggaaggccctcccctgggggccggggttttg
SPLT1_0051_H01.b : AATCTCTGGGAGCCAGGGGCCTTGGGAGCGCTCCTCTGGGTGCTGGGCTTTCTGCGGAAG
AMP01_0017_B11.b : AATCTCCTGGAccccattgccttgggaggcgctcctcgggtgcctggccttctgcggaaa
BMWN1_0100_H10.b : AATCTCTGGGAGCCAGGGGCCNTGGAGGCGCTCCTCTGGTGCCTGGGGGCTCTGCNG*AA
SMG01_0045_B04.b : AATCTCTGGGAGCCAGGGGCCTTGGAGGCGCTCCTCTGGGTGCTGGGCTTCTGCCGGGAG
20110601C-001772 : GCCCTTTCTGCAGCCACGAAG*CACCATTCTTAACACCCTGGAGCCCTCTCCCAAGTCTT
---------+---------+---------+---------+---------+---------+ 905
UTR01_0019_D11.b : G
BMWN1_0079_A12.b : gccggaaaccccttttttgcaccccgagaggcactttttttaacccccctggaacccctc
SPLT1_0051_H01.b : CCCCTTTCTGCNAGCACGAGG*CACCATTTCTAACACCCTGGAGCCCTCTCCCAAGTCTT
AMP01_0017_B11.b : cccttttcttcggcccaaaaggacaatcttaacaacttggacccctccccaagtcctgga
BMWN1_0100_H10.b : GCCCCTTCTGCAGCCACGAAG*CACCATTCTTTCCCACCCTGGAGCCTCCTCCAAGTCTT
SMG01_0045_B04.b : CCCCTTTCTGCAGGCACGAAGGCACAATTCTAACCACCCTGAAGCCCTCTCCCAAGTCTT
20110601C-001772 : GGACCAAATGGAAACAATAAAAGCTTTTTGCAGCAAAAAAAAAAAAAAAAAAAAAA....
---------+---------+---------+---------+---------+---------+ 961
UTR01_0019_D11.b :
BMWN1_0079_A12.b : ttcccaggtttgggaacaaaatggaaacaaaataattcttttttccccctcattaattat
SPLT1_0051_H01.b : GGACCAAATGGAAACAATAAAAGCTTTTTGCAGCAAAAAAAA
AMP01_0017_B11.b : accaagggaaaccttaaaactttttccttccaaggtcnttaaaggaaaaannnnnccttt
BMWN1_0100_H10.b : GAAC*AAATGGAAACAATAAAAGCTTTTTGCCACAGAAAAAAAAAAAAA
SMG01_0045_B04.b : GGACCAAATGAAAACA*TAAAAGGCTTTTGCAGCaaaaaaaaaaaaaaaaaaaaaa
20110601C-001772 : ............................................................
---------+---------+---------+---------+---------+---------+ 961
UTR01_0019_D11.b :
BMWN1_0079_A12.b : ttaatacaaataaactcttttaaaatagattttataatatcctatatttatatcgtgttt
SPLT1_0051_H01.b :
AMP01_0017_B11.b : tcctcccccccgccccaaaaagatttctaaacctttcttttggccccggccccctagtta
BMWN1_0100_H10.b :
SMG01_0045_B04.b :
20110601C-001772 : ............................................................
---------+---------+---------+---------+---------+---------+ 961
UTR01_0019_D11.b :
BMWN1_0079_A12.b : ccggggcgcgcggatttccccttttgtggggggttttttgtcctcccacttgataaaata
SPLT1_0051_H01.b :
AMP01_0017_B11.b : ttaaactggtcaaaccggtcccaagaaaccggccaaacacgggctggattccccaaaaaa
BMWN1_0100_H10.b :
SMG01_0045_B04.b :
20110601C-001772 : ............................................................
---------+---------+---------+---------+---------+---------+ 961
UTR01_0019_D11.b :
BMWN1_0079_A12.b : atgttggggttttgggaaaccccccctataaatgcggagaaaaaaatgccttttctggaa
SPLT1_0051_H01.b :
AMP01_0017_B11.b : accccccggt
BMWN1_0100_H10.b :
SMG01_0045_B04.b :
20110601C-001772 : ............................................................
---------+---------+---------+---------+---------+---------+ 961
UTR01_0019_D11.b :
BMWN1_0079_A12.b : aaattctgtacgacctgtttttcttatttcacaaatataccggcgaaaaataattatccc
SPLT1_0051_H01.b :
AMP01_0017_B11.b :
BMWN1_0100_H10.b :
SMG01_0045_B04.b :
20110601C-001772 : ............................................................
---------+---------+---------+---------+---------+---------+ 961
UTR01_0019_D11.b :
BMWN1_0079_A12.b : acccccgtctctactctctatttttctcaccgccccgggagggggggggagagtgtattt
SPLT1_0051_H01.b :
AMP01_0017_B11.b :
BMWN1_0100_H10.b :
SMG01_0045_B04.b :
20110601C-001772 : ............................................................
---------+---------+---------+---------+---------+---------+ 961
UTR01_0019_D11.b :
BMWN1_0079_A12.b : tccctattttatcgtcccccacgccgtgggggaggcgggtttcatttcgccctctctctn
SPLT1_0051_H01.b :
AMP01_0017_B11.b :
BMWN1_0100_H10.b :
SMG01_0045_B04.b :