Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-002214

Sequence: [FASTA format sequence] GTTTCCTGTC TCCTTTCACC AGCGAGCGGG TCAGGGGAGA AATTTCCAGG GCAGCTTCCC TGCAGCCTCT CCCTTCGGAG CTCAGACAGC AGCAACATGA CGATGATCTT CGGTTACTGG GACATCCGCG GGCTGGCCCA CGCCATCCGC CTGCTCCTGG AGTACACAGA CTCCAGCTAC GAGGAGAAGA AGTACACGAT GGGGGACGCT CCCGACTATG ACAGAAGCCA GTGGCTGAGT GACAAATTCA AGCTGGGCCT GGACTTCCCC AATCTGCCCT ACTTAATTGA CGGGGCTCAC AAGCTGACCC AGAGCAACGC CATCCTGCGC TACATTGCTC GCAAGCACAA CATGTGTGGG GAGACAGAGG AGGAGAAGAT TCGAGTGGAC ATTTTGGAGA ACCAAGCTAT GGATGTCCGT TTGCAGATGG CCAGGATCTG CTACAGCCCT GACTTTGAGA AACTGAAGCC TGGGTACTTG AAGGAGATCC CTGAAATCCT GAAGTGCTTC TCTGAGTTTC TGGGGAAGAG GCCTTGGTTT GCAGGGGACA AGCTCACCTA TGTGGATTTC CTGGCTTACG ATGTCCTTGA CCGGAACCGC ATATTTGAAC CCAAGTGCCT GGATGAATTC CCAAACCTGA AAGACTTCAT CACTCGCTTT GAGGGCCTAA AGAAGATCTC TGCCTACATG AAGTCCAGCC GCTTCCACCC AAACCCAATG TTTCTAAAGA TTGCTGTGTG GGGCAACAAG TAGAGTCCTG GAAGACCAGG AGATGGAATA AGGAGCCAGT GCTGTGTTTG CTGTGCCAGC ACCCTGGAGA ACACCTGGAC TTCTTGCACC CAGAACCATC TTTCCTTTTC TTTCCCCTTC TATTCACTCT AGGTGCCCTA TTGACCCCCT TATCTCCCTC CCAACCCCTT TTCCATCCAT CCCTTTCAGC TTCAGTCCCC ACTTATCTTC AGCAAAGTCC TTCTCTCACC CCATGTTATC CCTC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
GSTM4 glutathione S-transferase Mu 4 isoform 1 [Homo sapiens]. 390 e-109 O

GSTM1 glutathione S-transferase Mu 1 isoform 1 [Homo sapiens]. 388 e-108 O

GSTM2 glutathione S-transferase Mu 2 isoform 1 [Homo sapiens]. 379 e-105 O

GSTM5 glutathione S-transferase Mu 5 [Homo sapiens]. 372 e-103 O

GSTM4 glutathione S-transferase Mu 4 isoform 2 [Homo sapiens]. 344 6e-95 O

GSTM3 glutathione S-transferase Mu 3 [Homo sapiens]. 341 5e-94 O

GSTM2 glutathione S-transferase Mu 2 isoform 2 [Homo sapiens]. 332 3e-91 O

GSTM1 glutathione S-transferase Mu 1 isoform 2 [Homo sapiens]. 305 3e-83 O

GSTP1 glutathione S-transferase P [Homo sapiens]. 94 2e-19 O

HPGDS hematopoietic prostaglandin D synthase [Homo sapiens]. 72 8e-13 O

Locus	Definition	Score	E value	FL
GSTM4	glutathione S-transferase Mu 4 isoform 1 [Homo sapiens].	390	e-109	O
GSTM1	glutathione S-transferase Mu 1 isoform 1 [Homo sapiens].	388	e-108	O
GSTM2	glutathione S-transferase Mu 2 isoform 1 [Homo sapiens].	379	e-105	O
GSTM5	glutathione S-transferase Mu 5 [Homo sapiens].	372	e-103	O
GSTM4	glutathione S-transferase Mu 4 isoform 2 [Homo sapiens].	344	6e-95	O
GSTM3	glutathione S-transferase Mu 3 [Homo sapiens].	341	5e-94	O
GSTM2	glutathione S-transferase Mu 2 isoform 2 [Homo sapiens].	332	3e-91	O
GSTM1	glutathione S-transferase Mu 1 isoform 2 [Homo sapiens].	305	3e-83	O
GSTP1	glutathione S-transferase P [Homo sapiens].	94	2e-19	O
HPGDS	hematopoietic prostaglandin D synthase [Homo sapiens].	72	8e-13	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Gstm2 glutathione S-transferase Mu 2 [Mus musculus]. 375 e-104 O

Gstm7 glutathione S-transferase Mu 7 [Mus musculus]. 375 e-104 O

Gstm4 glutathione S-transferase mu 4 isoform 1 [Mus musculus]. 367 e-102 O

Gstm3 glutathione S-transferase Mu 3 [Mus musculus]. 362 e-100 O

Gstm1 glutathione S-transferase Mu 1 [Mus musculus]. 360 e-100 O

Gstm6 glutathione S-transferase Mu 6 [Mus musculus]. 358 3e-99 O

Gstm5 glutathione S-transferase Mu 5 [Mus musculus]. 334 7e-92 O

Gstm4 glutathione S-transferase mu 4 isoform 2 [Mus musculus]. 308 4e-84 O

Gm4845 PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus]. 276 2e-74 O

Gm4845 PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus]. 276 2e-74 O

Locus	Definition	Score	E value	FL
Gstm2	glutathione S-transferase Mu 2 [Mus musculus].	375	e-104	O
Gstm7	glutathione S-transferase Mu 7 [Mus musculus].	375	e-104	O
Gstm4	glutathione S-transferase mu 4 isoform 1 [Mus musculus].	367	e-102	O
Gstm3	glutathione S-transferase Mu 3 [Mus musculus].	362	e-100	O
Gstm1	glutathione S-transferase Mu 1 [Mus musculus].	360	e-100	O
Gstm6	glutathione S-transferase Mu 6 [Mus musculus].	358	3e-99	O
Gstm5	glutathione S-transferase Mu 5 [Mus musculus].	334	7e-92	O
Gstm4	glutathione S-transferase mu 4 isoform 2 [Mus musculus].	308	4e-84	O
Gm4845	PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus].	276	2e-74	O
Gm4845	PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus].	276	2e-74	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC479912 PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4) (GTH4) isoform 1 [Canis familiaris]. 388 e-108 O

LOC479911 PREDICTED: similar to Glutathione S-transferase Mu 3 (GSTM3-3) (GST class-mu 3) (hGSTM3-3) isoform 1 [Canis familiaris]. 338 6e-93 O

LOC479912 PREDICTED: similar to glutathione S-transferase M1 isoform 2 isoform 2 [Canis familiaris]. 313 2e-85 O

LOC479911 PREDICTED: similar to glutathione-S-transferase, mu 5 isoform 2 [Canis familiaris]. 308 4e-84 O

LOC610086 PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4) (GTH4) [Canis familiaris]. 211 9e-55

LOC480844 PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) [Canis familiaris]. 100 3e-21 O

LOC476005 PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) [Canis familiaris]. 100 3e-21

LOC476006 PREDICTED: similar to glutathione S-transferase, pi 1 [Canis familiaris]. 99 6e-21 O

LOC475191 PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) [Canis familiaris]. 98.2 1e-20 O

LOC611366 PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) [Canis familiaris]. 97.4 2e-20

Locus	Definition	Score	E value	FL
LOC479912	PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4) (GTH4) isoform 1 [Canis familiaris].	388	e-108	O
LOC479911	PREDICTED: similar to Glutathione S-transferase Mu 3 (GSTM3-3) (GST class-mu 3) (hGSTM3-3) isoform 1 [Canis familiaris].	338	6e-93	O
LOC479912	PREDICTED: similar to glutathione S-transferase M1 isoform 2 isoform 2 [Canis familiaris].	313	2e-85	O
LOC479911	PREDICTED: similar to glutathione-S-transferase, mu 5 isoform 2 [Canis familiaris].	308	4e-84	O
LOC610086	PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4) (GTH4) [Canis familiaris].	211	9e-55
LOC480844	PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) [Canis familiaris].	100	3e-21	O
LOC476005	PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) [Canis familiaris].	100	3e-21
LOC476006	PREDICTED: similar to glutathione S-transferase, pi 1 [Canis familiaris].	99	6e-21	O
LOC475191	PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) [Canis familiaris].	98.2	1e-20	O
LOC611366	PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) [Canis familiaris].	97.4	2e-20

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
GSTM1 glutathione S-transferase mu 1 [Bos taurus]. 422 e-118 O

GSTM1 glutathione S-transferase Mu 1 [Bos taurus]. 404 e-113 O

GSTM1 glutathione S-transferase mu 1 [Bos taurus]. 379 e-105 O

GSTM3 glutathione S-transferase mu 3 [Bos taurus]. 337 1e-92 O

GSTM2 PREDICTED: glutathione S-transferase M2 [Bos taurus]. 318 5e-87 O

GSTM2 PREDICTED: glutathione S-transferase M2 isoform 2 [Bos taurus]. 318 5e-87 O

LOC100295687 PREDICTED: GSTM2 protein-like [Bos taurus]. 311 6e-85 O

LOC100295687 PREDICTED: GSTM2 protein-like [Bos taurus]. 311 6e-85 O

GSTP1 glutathione S-transferase P [Bos taurus]. 100 3e-21 O

LOC525938 PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus]. 97.4 2e-20 O

Locus	Definition	Score	E value	FL
GSTM1	glutathione S-transferase mu 1 [Bos taurus].	422	e-118	O
GSTM1	glutathione S-transferase Mu 1 [Bos taurus].	404	e-113	O
GSTM1	glutathione S-transferase mu 1 [Bos taurus].	379	e-105	O
GSTM3	glutathione S-transferase mu 3 [Bos taurus].	337	1e-92	O
GSTM2	PREDICTED: glutathione S-transferase M2 [Bos taurus].	318	5e-87	O
GSTM2	PREDICTED: glutathione S-transferase M2 isoform 2 [Bos taurus].	318	5e-87	O
LOC100295687	PREDICTED: GSTM2 protein-like [Bos taurus].	311	6e-85	O
LOC100295687	PREDICTED: GSTM2 protein-like [Bos taurus].	311	6e-85	O
GSTP1	glutathione S-transferase P [Bos taurus].	100	3e-21	O
LOC525938	PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].	97.4	2e-20	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC780435 glutathione S-transferase mu 2 [Sus scrofa]. 414 e-116 O

LOC100156976 PREDICTED: glutathione S-transferase Mu 1-like [Sus scrofa]. 380 e-106

LOC100514231 PREDICTED: glutathione S-transferase Mu 5-like [Sus scrofa]. 343 9e-95 O

LOC100525731 PREDICTED: glutathione S-transferase P 1-like [Sus scrofa]. 89 4e-18 O

LOC100623584 PREDICTED: hematopoietic prostaglandin D synthase-like [Sus scrofa]. 73.6 2e-13 O

LOC100526118 PREDICTED: glutathione S-transferase A1-like [Sus scrofa]. 65.5 4e-11 O

LOC100510917 PREDICTED: glutathione S-transferase A4-like [Sus scrofa]. 63.5 2e-10 O

LOC100623696 PREDICTED: glutathione S-transferase A4-like [Sus scrofa]. 63.5 2e-10 O

GSTA1 glutathione S-transferase alpha M14 [Sus scrofa]. 58.9 4e-09 O

GSTA2 glutathione S-transferase A2 [Sus scrofa]. 57 2e-08 O

Locus	Definition	Score	E value	FL
LOC780435	glutathione S-transferase mu 2 [Sus scrofa].	414	e-116	O
LOC100156976	PREDICTED: glutathione S-transferase Mu 1-like [Sus scrofa].	380	e-106
LOC100514231	PREDICTED: glutathione S-transferase Mu 5-like [Sus scrofa].	343	9e-95	O
LOC100525731	PREDICTED: glutathione S-transferase P 1-like [Sus scrofa].	89	4e-18	O
LOC100623584	PREDICTED: hematopoietic prostaglandin D synthase-like [Sus scrofa].	73.6	2e-13	O
LOC100526118	PREDICTED: glutathione S-transferase A1-like [Sus scrofa].	65.5	4e-11	O
LOC100510917	PREDICTED: glutathione S-transferase A4-like [Sus scrofa].	63.5	2e-10	O
LOC100623696	PREDICTED: glutathione S-transferase A4-like [Sus scrofa].	63.5	2e-10	O
GSTA1	glutathione S-transferase alpha M14 [Sus scrofa].	58.9	4e-09	O
GSTA2	glutathione S-transferase A2 [Sus scrofa].	57	2e-08	O

Assembly Members: 8 TOP

Library Plate Loc. Read Name Accession Full Seq.

CLNT1 0049 D12 CLNT1_0049_D12.b FS660935
CLNT1 0117 C12 CLNT1_0117_C12.b HX220459
LVRM1 0004 B01 LVRM1_0004_B01.b CJ001079
LVRM1 0191 D05 LVRM1_0191_D05.b CJ006287 AK233626
PST01 0067 B08 PST01_0067_B08.b FS702110
SMG01 0040 D02 SMG01_0040_D02.b FS716771
SMG01 0070 B07 SMG01_0070_B07.b FS719293
SMG01 0097 A03 SMG01_0097_A03.b FS721594

SNPs: 3 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
109 C 1 2 0.375 W N CTC/L
T 5 0 0.625 TTC/F
433 A 5 0 0.625 W S AGG/R
C 1 2 0.375 CGG/R
441 C 5 0 0.714 W S TGC/C
T 1 1 0.286 TGT/C

Alignment: TOP

20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
SMG01_0070_B07.b : cctctatnnnnggagtaagcagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0191_D05.b :                 agxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SMG01_0040_D02.b :             nnncccgcaatnnnngggtaacagcxxxxxxxxxxxxxxxxxxxxxxx
SMG01_0097_A03.b :                   ataaagggagtaagcagcggnacggntxxxxxxxxxxxxxxx
PST01_0067_B08.b :                                                         nnnn
LVRM1_0004_B01.b :                                             ttgtcxxxxxxxxxxx
CLNT1_0117_C12.b :                      nggtctttnnnnnnnnccgttagcgtacgagtgxxxxxx
CLNT1_0049_D12.b :                    nggcgttnnnggtactcctatagcgnacgagtgxxxxxxxx


20110601C-002214 : ....GTTTCCTGTCTCCTTTCACCAGCGAGCGGGTCAGGGGAGAAATTTCCAGGGCAGCT
                   ---------+---------+---------+---------+---------+---------+ 56
SMG01_0070_B07.b : xxxxGTTTCCTGTCTCCTTTCACCAGCGAGCGGGTCAGGGGAGAAATTTCCAGGGCAGCT
LVRM1_0191_D05.b : xxxxgtTTCCTGTCTCCTTTCACCAGCGAGCGGGTCAGGGGAGAAATTTCCAGGGCAGCT
SMG01_0040_D02.b : xxxxxxxxxxxxxxxxCTTTCACCAGCGAGCGGGTCAGGGGAGAAATTTCCAGGGCAGCT
SMG01_0097_A03.b : xxxxxxxxxxxxxxxctTTTCACCAGCGAGCGGGTCAGGGGAGAAATTTCCAGGGCAGCT
PST01_0067_B08.b : gctgctgtggctctggcttttcCCAGCGAGCGGGTCAGGGGAGAAATTTCCAGGGCAGCT
LVRM1_0004_B01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTTCCAGGGCAGCT
CLNT1_0117_C12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTTCCAGGGCAGCT
CLNT1_0049_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTTCCAGGGCAGCT


20110601C-002214 : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCTTCGGTTA
                   ---------+---------+---------+---------+---------+---------+ 116
SMG01_0070_B07.b : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCTTCGGTTA
LVRM1_0191_D05.b : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCCTCGGTTA
SMG01_0040_D02.b : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCTTCGGTTA
SMG01_0097_A03.b : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCTTCGGTTA
PST01_0067_B08.b : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCTTCGGTTA
LVRM1_0004_B01.b : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCCTCGGTTA
CLNT1_0117_C12.b : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCCTCGGTTA
CLNT1_0049_D12.b : TCCCTGCAGCCTCTCCCTTCGGAGCTCAGACAGCAGCAACATGACGATGATCTTCGGTTA


20110601C-002214 : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG
                   ---------+---------+---------+---------+---------+---------+ 176
SMG01_0070_B07.b : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG
LVRM1_0191_D05.b : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG
SMG01_0040_D02.b : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG
SMG01_0097_A03.b : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG
PST01_0067_B08.b : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG
LVRM1_0004_B01.b : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG
CLNT1_0117_C12.b : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG
CLNT1_0049_D12.b : CTGGGACATCCGCGGGCTGGCCCACGCCATCCGCCTGCTCCTGGAGTACACAGACTCCAG


20110601C-002214 : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT
                   ---------+---------+---------+---------+---------+---------+ 236
SMG01_0070_B07.b : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT
LVRM1_0191_D05.b : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT
SMG01_0040_D02.b : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT
SMG01_0097_A03.b : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT
PST01_0067_B08.b : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT
LVRM1_0004_B01.b : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT
CLNT1_0117_C12.b : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT
CLNT1_0049_D12.b : CTACGAGGAGAAGAAGTACACGATGGGGGACGCTCCCGACTATGACAGAAGCCAGTGGCT


20110601C-002214 : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC
                   ---------+---------+---------+---------+---------+---------+ 296
SMG01_0070_B07.b : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC
LVRM1_0191_D05.b : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC
SMG01_0040_D02.b : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC
SMG01_0097_A03.b : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC
PST01_0067_B08.b : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC
LVRM1_0004_B01.b : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC
CLNT1_0117_C12.b : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC
CLNT1_0049_D12.b : GAGTGACAAATTCAAGCTGGGCCTGGACTTCCCCAATCTGCCCTACTTAATTGACGGGGC


20110601C-002214 : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG
                   ---------+---------+---------+---------+---------+---------+ 356
SMG01_0070_B07.b : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG
LVRM1_0191_D05.b : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG
SMG01_0040_D02.b : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG
SMG01_0097_A03.b : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG
PST01_0067_B08.b : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG
LVRM1_0004_B01.b : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG
CLNT1_0117_C12.b : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG
CLNT1_0049_D12.b : TCACAAGCTGACCCAGAGCAACGCCATCCTGCGCTACATTGCTCGCAAGCACAACATGTG


20110601C-002214 : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT
                   ---------+---------+---------+---------+---------+---------+ 416
SMG01_0070_B07.b : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT
LVRM1_0191_D05.b : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT
SMG01_0040_D02.b : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT
SMG01_0097_A03.b : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT
PST01_0067_B08.b : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT
LVRM1_0004_B01.b : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT
CLNT1_0117_C12.b : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT
CLNT1_0049_D12.b : TGGGGAGACAGAGGAGGAGAAGATTCGAGTGGACATTTTGGAGAACCAAGCTATGGATGT


20110601C-002214 : CCGTTTGCAGATGGCCAGGATCTGCTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA
                   ---------+---------+---------+---------+---------+---------+ 476
SMG01_0070_B07.b : CCGTTTGCAGATGGCCAGGATCTGCTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA
LVRM1_0191_D05.b : CCGTTTGCAGATGGCCCGGATCTGTTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA
SMG01_0040_D02.b : CCGTTTGCAGATGGCCAGGATCTGCTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA
SMG01_0097_A03.b : CCGTTTGCAGATGGCCAGGATCTGCTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA
PST01_0067_B08.b : CCGTTTGCAGATGGCCAGGATCTGCTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA
LVRM1_0004_B01.b : CCGTTTGCAGATGGCCCGGATCTGTTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA
CLNT1_0117_C12.b : CCGTTTGCAGATGGCCCGGATCTGTTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA
CLNT1_0049_D12.b : CCGTTTGCAGATGGCCAGGATCTGCTACAGCCCTGACTTTGAGAAACTGAAGCCTGGGTA


20110601C-002214 : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG
                   ---------+---------+---------+---------+---------+---------+ 536
SMG01_0070_B07.b : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG
LVRM1_0191_D05.b : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG
SMG01_0040_D02.b : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG
SMG01_0097_A03.b : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG
PST01_0067_B08.b : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG
LVRM1_0004_B01.b : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG
CLNT1_0117_C12.b : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG
CLNT1_0049_D12.b : CTTGAAGGAGATCCCTGAAATCCTGAAGTGCTTCTCTGAGTTTCTGGGGAAGAGGCCTTG


20110601C-002214 : GTTTGCAGGGGACAAGCTCACCTATGTGGATTTCCTGGCTTACGATGTCCTTGACCGGAA
                   ---------+---------+---------+---------+---------+---------+ 596
SMG01_0070_B07.b : GTTTGCAGGGGACAAGCTCACCTATGTGGATTTCCTGGCTTACGATGTCCTTGACCGGAA
LVRM1_0191_D05.b : GTTTGCACGGGACAAGCTCACCTATGTGGATTTCCTGGCTTACGAGGTCCTTGACCGCGA
SMG01_0040_D02.b : GTTTGCAGGGGACNAGCTCACCTATGTGGATTTCTTGGNCTACGATGTCCTTGACCGGAA
SMG01_0097_A03.b : GTTTGCAGGGGACAAGCTCACCTATGTGGATTTCCTGGCTTACGATGTCCTTGACCGGAA
PST01_0067_B08.b : GTTTGCAGGGGACAAGCTCACCTATGTGGATTTCCTGGCTTACGATGTCCTTGACCGGAA
LVRM1_0004_B01.b : GTTTGCAGGGGACAAGCTCACCTATGTGGATTTCCTGGCTTACGATGTCCTTGACCGGAA
CLNT1_0117_C12.b : GTTTGCAGGGGACAAGCTCACCTATGTGGATTTCCTGGCTTACGATGTCCTTGACCGGAA
CLNT1_0049_D12.b : GTTTGCAGGGGACAAGCTCACCTATGTGGATTTCCTGGCTTACGATGTCCTTGACCGGAA


20110601C-002214 : CCGCATATTTGAACCCAAGTGCCTGGATGAATTCCCAAACCTGAAAGACTTCATCACTCG
                   ---------+---------+---------+---------+---------+---------+ 656
SMG01_0070_B07.b : CCGCATATTTGAACCCAAGTGCCTGGATGAATTCCCAAACCTGAAAGACTTCATCACTCG
LVRM1_0191_D05.b : CCGCATATTTGAACACAAGTGCCGGGAAGAATTtcccaacctcgaacacttcacgctcgc
SMG01_0040_D02.b : CCGCATATTTGAACCCAAGTGCCTGGATGAATTCCCAAACCTGAAAGACTTCATCACTCG
SMG01_0097_A03.b : CCGCATATTTGAACCCAAGTGCCTGGATGAATTCCCAAACCTGAAAGACTTCATCACTCG
PST01_0067_B08.b : CCGCATATTTGAACCCAAGTGCCTGGATGAATTCCCAAACCTGAAAGACTTCATCACTCG
LVRM1_0004_B01.b : CCGCATATTTGAACCCAAGTGCCTGGATGAATTCCCAAACCTGAAAGACTTCATCACTCG
CLNT1_0117_C12.b : CCGCATATTCGAACCCAAGTGCCTGGATGAATTCCCAAACCTGAAAGACTTCATCACTCG
CLNT1_0049_D12.b : CCGCATATTTGAACCCAAGTGCCTGGATGAATTCCCAAACCTGAAAGACTTCATCACTCG


20110601C-002214 : CTTTGAGGGCCTAAAGAA*GATCTCTGCCTACATGAAGT*CCAGCCGCTTCCACCCAAAC
                   ---------+---------+---------+---------+---------+---------+ 714
SMG01_0070_B07.b : CTTTGAGGGCCTAAAGAA*GATCTCTGCCTACATGAAGT*CCAGCCGCTTCCACCCAAAC
LVRM1_0191_D05.b : ctttacgggcaacccgaaatctttgactacatcacttccaccgcctcccgcaaacccagg
SMG01_0040_D02.b : CTTTGAGGGCCTAAAGAAAGATCTCTGCCTACATGAAGTTCCAGCGGCTTCCACCCAAAC
SMG01_0097_A03.b : CTTTGAGGGGCTAAAGAA*GATCTCTGCCTACATGAAGT*CCAGCCGCTTCCACCCAAAC
PST01_0067_B08.b : CTTTGAGGGCCTAAAGAA*GATCTCTGCCTACATGAAGT*CCAGCCGCTTCCACCCAAAC
LVRM1_0004_B01.b : CTTTGAGGGCCTAAAGAA*GATCTCTGCCTACATGAAGT*CCAGCCGCTTCCACCCAAAC
CLNT1_0117_C12.b : CTTTGAGGGCCTAAAGAA*GATCTCTGCCTACATGAAGT*CCAGCCGCTTCCACCCAAAC
CLNT1_0049_D12.b : CTTTGAGGGCCTAAAGAA*GATCTCTGCCTACATGAAGT*CCAGCCGCTTCCACCCAAAC


20110601C-002214 : CCAATGTTTCTAAAGATTGCTGTGTGGGGCAACAAGTAGAGTCCTGGAAGACCAGGAGAT
                   ---------+---------+---------+---------+---------+---------+ 774
SMG01_0070_B07.b : CCAATGTTTCTAAAGATTGCTGTGTGGGGCAACAAGTAGAGTCCTGGAAGACCAGGAGAT
LVRM1_0191_D05.b : ttctaaagatgccgtgtgtggtaa                                   
SMG01_0040_D02.b : CAAATGTTTCctaaaaatggtgggggggggcaaaaattaaagtcctggaaaaaccggaaa
SMG01_0097_A03.b : CCAATGTTTCTAAAGATTGCTGTGTGGGGCAACAAGTAGAGTCCTGGAAGACCAAGAGAT
PST01_0067_B08.b : CCAATGTTTCTAAAGATTGCTGTGTGGGGCAACAAGTAGAGTCCTGGAAGATCAGGAGAT
LVRM1_0004_B01.b : CCCATGTTTCTAAAGATTGCTGTGTGGGGGGCACAGTAGAGTCCTGGAAGACCAGGAGAT
CLNT1_0117_C12.b : CCAATGTTTCTAAAGATTGCTGTGTGGGGCAACAAGTAGAGTCCTGGAAGACCAGGAGAT
CLNT1_0049_D12.b : CCAATGTTTCTAAAGATTGCTGTGTGGGGCAACAAGTAGAGTCCTGGAAGACCAGGAGAT


20110601C-002214 : GGAATAAGGAGCCAGTGCTGTGTTTGCTGTGCCAGCACCCTGGAGAACACCTGGACTTCT
                   ---------+---------+---------+---------+---------+---------+ 834
SMG01_0070_B07.b : GGAATAAGGAGCCAGTGCTGTGTTTGCTGTGCCAGCACCCTGGAGAAACACTGGACTTCT
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : agggaatagggacccgtggcttggtttcccgtggcccccccccggaaaaaaacccgggat
SMG01_0097_A03.b : GGAATAAGGAGCCAGTGCTGTGTTTGCTGTGCCCACACCCTGAAGAACACCTGGACTTTC
PST01_0067_B08.b : GGAATAAGGAGCCAGTGCTGTGTTTGCTGTGCCAGCACCCTGGAGAACACCTGGACTTCT
LVRM1_0004_B01.b : GGGATAggagcc                                               
CLNT1_0117_C12.b : GGAATAAGGAGCCAGTGCTGTGTTTGCTGTGCCAGCACCCTGNAGAACACCTGGACTTCT
CLNT1_0049_D12.b : GGAATAAGGAGCCAGTGCTGTGTTTGCTGTGCCAGCACCCTGNAGTACACCTGGACTTCT


20110601C-002214 : TGCACCCAGAACCATCTTTCCTTTTCTTTCCCCTTCTATTCACTCTAGGTGCCCTATTGA
                   ---------+---------+---------+---------+---------+---------+ 894
SMG01_0070_B07.b : TGCACCCAGAAACATCTTTCCTTTTCTTTCCCCTTCTATTCACTCTAGGTGgccctatga
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : tttttggggcccaaaaaccatttttcttttttttttccccccttttttcaccccaagggg
SMG01_0097_A03.b : TGCACCCA*AACCATCCTTCCCTTTTCTTTCCCTTCTATTCCCTCTAGGTGCCCTATTGA
PST01_0067_B08.b : TGCACCCAGAACCATCTTTCCTTTTCTTTCCCCTTCTATTCACTCTAGGTGCCCTATTGA
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b : TGCACCCAGAACCATCTTTCCTTTTC*TTCCCCTTCTATTCACTCTAGtgccctattgac
CLNT1_0049_D12.b : TGCACCCAGAACCATCTTTCCTTTTCTTTCCCCTTCTATTCACTCTAGGTGCCCTATTGA


20110601C-002214 : CCCCCTTATCTCCCTCCCAACCCCTTTTCCATCCATCCCTTTCAGCTTCAGTCCCCACTT
                   ---------+---------+---------+---------+---------+---------+ 954
SMG01_0070_B07.b : ccccctttatctccttccaaccccttttccatccatcctttcagcctcagtccccattta
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : ccctaatttggccccctttttcccccccccaaacccctttttccccccaccccttttaag
SMG01_0097_A03.b : CCCCCTTAatctccttccaaaccccttttccatcatcctttcaagcttcattccccacta
PST01_0067_B08.b : CCCCCTTATCTCCCTCCCAACCCCTTTTCCATCCATCCCTTTCAGCTTCAGTCCCCACTT
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b : ccctttatctcctcccaacccccttccatcaatcttttcaggctcagtccccattatctt
CLNT1_0049_D12.b : CCCCCTTATCTCCCTCCNANCCCCTTTTCatcccatctttncagcttcagtccccacttt


20110601C-002214 : ATCTTCAGCAAAGTCCTTCTCTCACCCCATGTTATCCCTC....................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b : tctcagcaaagttcctctctcacccatgttatccctccttcataaaaccaaccaacaacc
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : gggtgggcccccccttttttttttaaaaaaattctccccccccccccggggtttcccccc
SMG01_0097_A03.b : atcttcgcaaaattcccctcccaaccatggtttccctccttcattaaaacaaacaaataa
PST01_0067_B08.b : ATCTTCAGCAAAGTCCTTCTCTCACCCCATGTTATCCCTCttcactaaaaccaacttact
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b : cgcaaaagtcctctccaccaatgtttcccctcttcataaaacaaccaatatcctccctcc
CLNT1_0049_D12.b : atctcagcaaaagtcctcctcaccccatgttatccctcctcactaaaacaaactactatc


20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b : ctcccttcatggtggctcggttagaggaaccaaccaaccctggttgaaagtttggtttaa
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : cttttaaaaaaaaaaaaaaaaaaaaccccccccccacaagggggcccccggtattaaaaa
SMG01_0097_A03.b : ccttcccttccatgttgcttcggttagaggagcaaaccaaacccgggttaaaaagtttgg
PST01_0067_B08.b : atccttcccttcattgttgcttctgttatgaggagccaaacaagacccctggttcagaaa
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b : cttgtgcttcgttatgagagcaaacaaaccccggttaaaagtttgctctattttaacatg
CLNT1_0049_D12.b : ttcccttcaatgtttgctctntatgaggagcaaacagaccccggntcaaaaagctcgctc


20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b : ttcaaattggctgaaaaaaaccgggctgggtggagcccggttccgggggttccggccacc
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : aacccacacacacccccggttaaaaaaagattttttttttacacccccaggtgtgggaaa
SMG01_0097_A03.b : ttcaattccaaaatggcttaaaaaaatccgggtggggtgcaagcctgctttcagggggtt
PST01_0067_B08.b : gctctggctctcactcccagcactgccttgaagaacagtcctggcttgggggcaggccct
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b : cctgaaaaaatctggttggggcaggccgcttccggtgccccgcccccctttgtcccccaa
CLNT1_0049_D12.b : taaattcaanactgcctgaaaaaaatcttgcttggtgtgcagccctgcttccagggggtt


20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b : ttttttccccaaagcctatacaccggggctttttcccagttccggaacaacaatgtgggg
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : aaaaaaacatctttggtgtgtggagcccccctctctttttgggtgggtggccgccccccc
SMG01_0097_A03.b : ccggcccccggttttccccaaaaacctaacaacccgcggatttttcccagttccggaaca
PST01_0067_B08.b : gctttccatgggggtccctgcccagcctggtttttccccagaaagcctaaaccacccgcc
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b : aacctaacaccggccatttttccagtccgaaacaaaaattgtgggcaaggggctttccct
CLNT1_0049_D12.b : ctgcccgccctgtttacccagaaagccttacaaacgggcgcttattgcccagttccggaa


20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b : gaaggggcctttcccggtggctaaggaaccaaaagaaaattttgggggaaagagataaat
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : ccctttttttttccccagaaaaaaaaataatacacgcggggtattttttttttctcttct
SMG01_0097_A03.b : aaaaaattggtggggaaagggtccttttccccgtgtgcctaaggaccccaaaagaaaaat
PST01_0067_B08.b : gcattattgcccggttcctgaaacatgaatgatgggttggccaaaggggtctattctccc
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b : gttctttgggaccaaaaaagtaaattgggggagagaaaataattgcttttttcacggact
CLNT1_0049_D12.b : cctaacaattgtttggccaaggggcacttttccccgtgttccttaggaaccctgaaggag


20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b : ttttttttttttcccagatttttctaggggtataagggccctgtgtccctttttttttcc
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : tctaaccaaaaacaaaaagattggtggggggggggggaggtgttttctcttcttcttttt
SMG01_0097_A03.b : ttggggggaaagggaaaaataatttttggtctttttccaccaagattttttaaagagggc
PST01_0067_B08.b : ggtggccgttagggaacccggaatgagtatcattgtgtgggggaaagggagagaaaaggt
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b : cccgagggggaaaaggggccttgggtcttatttttcccccgtgtttatagggt      
CLNT1_0049_D12.b : acattgtggggggaaagagaaaatattgttctgctttttttcccaggatttgttccaaag


20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b : cccattattttatagggggggggggggaaaaagtgtgaaaccccccctatttttttttaa
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b : gtaagaaaaag                                                
SMG01_0097_A03.b : tcaaagagccccttgggggctccttttttttgttcacccgaattttatttatataggggc
PST01_0067_B08.b : tctggcatttatttccccaggaatctgtccgaaagggnctcataaaggagccctttgggc
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b :                                                             
CLNT1_0049_D12.b : gggccttaag                                                 


20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b : taaaaaaaaaa                                                
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b :                                                             
SMG01_0097_A03.b : cggggggaggagaaatgtttttaaggaacttccccgaatctttttttttgtttcttaaag
PST01_0067_B08.b : gggcctcttaataaatgtgctacccgggatggaatcttattataagggcgt        
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b :                                                             
CLNT1_0049_D12.b :                                                             


20110601C-002214 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 994
SMG01_0070_B07.b :                                                             
LVRM1_0191_D05.b :                                                             
SMG01_0040_D02.b :                                                             
SMG01_0097_A03.b : cggtaaaaaaaaaanngggnnnnnnnnccnccgcnngccccgcgtgatgagctcacatc
PST01_0067_B08.b :                                                             
LVRM1_0004_B01.b :                                                             
CLNT1_0117_C12.b :                                                             
CLNT1_0049_D12.b :