[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-002529
Length:
1,152
Sequence:
[FASTA format sequence]
CAGGCCCCGC CCCACCCAAG CCCCGCCCCG CAGCCTGGAG GCGCGCGCGC GCGCGCGCGT
GCGGGAGGGG GCGGGTGGGG AAGGATCGCC AGAGAGATCC GAGGCGAGCC TCGCGCGCCC
GCCCCCGCCC TGGCCCCCAG CTCCCACCCG GTGGGCCCGG CTCAGCCATG ATCAAGGCGA
TCCTCATCTT TAATAACCAC GGGAAGCCGC GGCTCTCCAA GTTCTACCAG CCCTACAGTG
AAGATACACA ACAGCAAATC ATCAGGGAGA CATTCCATTT GGTGTCTAAG AGGGATGAGA
ATGTTTGTAA TTTCCTAGAA GGAGGATTAT TAATTGGAGG ATCTGACAAC AAACTGATTT
ATAGACATTA TGCAACATTG TATTTTGTCT TCTGTGTGGA TTCTTCAGAA AGTGAACTTG
GCATTTTAGA TCTAATTCAA GTATTTGTGG AAACATTAGA CAAGTGTTTT GAAAATGTCT
GTGAACTGGA TTTAATTTTC CATGTAGATA AGGTTCACAA TATTCTTGCA GAAATGGTGA
TGGGAGGAAT GGTATTGGAG ACCAACATGA ATGAGATTGT TACACAAATT GATGCGCAAA
ATAAACTGGA GAAATCTGAG GCTGGCTTAG CAGGAGCTCC AGCCCGTGCT GTATCAGCTG
TAAAGAATAT GAATCTTCCT GAGATCCCAA GAAATATTAA CATTGGTGAC ATCAGTATAA
AAGTGCCAAA CCTGCCCTCT TTTAAATAAA AAATTTAAAA GGCCACTCCC AGGTAAAATC
CAGGGGGAAG AGTCATCTAA GTTTACCATG CAGTTGTTTA CCAAAAATAG AGGAGGAGAG
TCTTAACTTT TGCTCTTGGA TTTAAGTCAA GGTACTGTAT AGAAGTTATG TAAAATCTGT
ATCGAAGTTC AACATTGCTT TTCTTGCTCA GTGATTTTGA AGAAATTGAG TAGTTCCAAG
TGTGATTTTT TCTTTCTTTT CTAAACTGCA TTCCTATGGC CACCTAAGGC ATGCCTCTAT
GTATTGGCTA CTACAGTATT CCGAAAAGTG TTTGAGACAT CTCTTTAAAT TATGTACAAC
CCAAAATGTT GGTGTTTTGA ATGGATCAAA GTGCAGCGTT CCTTAATTCC TTCTGTTATC
TGTCACAATT GT
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | AP3S1 | AP-3 complex subunit sigma-1 [Homo sapiens]. | 382 | e-106 | O |
|
| AP3S2 | AP-3 complex subunit sigma-2 [Homo sapiens]. | 331 | 7e-91 | O |
|
| C15orf38-AP3S2 | C15orf38-AP3S2 fusion protein [Homo sapiens]. | 295 | 5e-80 | |
|
| AP2S1 | AP-2 complex subunit sigma isoform AP17 [Homo sapiens]. | 114 | 2e-25 | O |
|
| AP1S1 | AP-1 complex subunit sigma-1A [Homo sapiens]. | 108 | 9e-24 | O |
|
| AP1S2 | AP-1 complex subunit sigma-2 [Homo sapiens]. | 107 | 2e-23 | O |
|
| AP4S1 | AP-4 complex subunit sigma-1 isoform 2 [Homo sapiens]. | 104 | 2e-22 | O |
|
| AP1S3 | AP-1 complex subunit sigma-3 [Homo sapiens]. | 101 | 1e-21 | O |
|
| AP4S1 | AP-4 complex subunit sigma-1 isoform 1 [Homo sapiens]. | 73.2 | 4e-13 | O |
|
| AP2S1 | AP-2 complex subunit sigma isoform AP17delta [Homo sapiens]. | 67 | 3e-11 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Ap3s1 | AP-3 complex subunit sigma-1 [Mus musculus]. | 382 | e-106 | O |
|
| Ap3s2 | AP-3 complex subunit sigma-2 [Mus musculus]. | 331 | 6e-91 | O |
|
| Ap2s1 | AP-2 complex subunit sigma [Mus musculus]. | 114 | 2e-25 | O |
|
| Ap1s1 | AP-1 complex subunit sigma-1A [Mus musculus]. | 108 | 8e-24 | O |
|
| Ap1s2 | AP-1 complex subunit sigma-2 [Mus musculus]. | 107 | 1e-23 | O |
|
| Ap4s1 | AP-4 complex subunit sigma-1 [Mus musculus]. | 102 | 4e-22 | O |
|
| Ap1s3 | AP-1 complex subunit sigma-3 [Mus musculus]. | 101 | 1e-21 | O |
|
| Copz2 | coatomer subunit zeta-2 [Mus musculus]. | 51.6 | 1e-06 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC479042 | PREDICTED: similar to Adapter-related protein complex 3 sigma 2 subunit (Sigma-adaptin 3b) (AP-3 complex sigma-3B subunit) (Sigma-3B-adaptin) [Canis familiaris]. | 331 | 7e-91 | O |
|
| LOC607494 | PREDICTED: similar to Adapter-related protein complex 3 sigma 1 subunit (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma-3A-adaptin) isoform 2 [Canis familiaris]. | 318 | 5e-87 | O |
|
| LOC607494 | PREDICTED: similar to Adapter-related protein complex 3 sigma 1 subunit (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma-3A-adaptin) isoform 3 [Canis familiaris]. | 306 | 2e-83 | O |
|
| LOC476427 | PREDICTED: similar to Clathrin coat assembly protein AP17 (Clathrin coat associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) isoform 1 [Canis familiaris]. | 114 | 2e-25 | O |
|
| LOC611468 | PREDICTED: similar to Adapter-related protein complex 1 sigma 1B subunit (Sigma-adaptin 1B) (Adaptor protein complex AP-1 sigma-1B subunit) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Sigma 1B s... [Canis familiaris]. | 108 | 7e-24 | |
|
| LOC480283 | PREDICTED: similar to Adapter-related protein complex 4 sigma 1 subunit (Sigma subunit of AP-4) (AP-4 adapter complex sigma subunit) isoform 3 [Canis familiaris]. | 104 | 2e-22 | O |
|
| LOC480283 | PREDICTED: similar to Adapter-related protein complex 4 sigma 1 subunit (Sigma subunit of AP-4) (AP-4 adapter complex sigma subunit) isoform 2 [Canis familiaris]. | 104 | 2e-22 | O |
|
| LOC478929 | PREDICTED: similar to adaptor-related protein complex AP-1, sigma 3 [Canis familiaris]. | 103 | 2e-22 | O |
|
| LOC480283 | PREDICTED: similar to Adapter-related protein complex 4 sigma 1 subunit (Sigma subunit of AP-4) (AP-4 adapter complex sigma subunit) isoform 1 [Canis familiaris]. | 93.2 | 4e-19 | O |
|
| LOC476427 | PREDICTED: similar to adaptor-related protein complex 2, sigma 1 subunit isoform AP17delta isoform 2 [Canis familiaris]. | 67 | 3e-11 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| AP3S1 | AP-3 complex subunit sigma-1 [Bos taurus]. | 382 | e-106 | O |
|
| AP3S2 | AP-3 complex subunit sigma-2 [Bos taurus]. | 330 | 1e-90 | O |
|
| AP2S1 | AP-2 complex subunit sigma [Bos taurus]. | 114 | 2e-25 | O |
|
| AP1S2 | AP-1 complex subunit sigma-2 [Bos taurus]. | 107 | 2e-23 | O |
|
| AP1S1 | AP-1 complex subunit sigma-1A [Bos taurus]. | 106 | 3e-23 | O |
|
| AP1S3 | AP-1 complex subunit sigma-3 [Bos taurus]. | 104 | 2e-22 | O |
|
| AP4S1 | AP-4 complex subunit sigma-1 [Bos taurus]. | 102 | 5e-22 | O |
|
| LOC790360 | PREDICTED: AdaPtin, Small chain (clathrin associated complex) family member (aps-2)-like [Bos taurus]. | 81.6 | 1e-15 | O |
|
| COPZ2 | coatomer subunit zeta-2 isoform 1 [Bos taurus]. | 51.2 | 2e-06 | O |
|
| COPZ2 | coatomer subunit zeta-2 isoform 2 [Bos taurus]. | 51.2 | 2e-06 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| AP3S2 | PREDICTED: UPF0552 protein C15orf38 homolog isoform 1 [Sus scrofa]. | 331 | 4e-91 | O |
|
| LOC100624002 | PREDICTED: AP-3 complex subunit sigma-1-like, partial [Sus scrofa]. | 328 | 4e-90 | O |
|
| AP3S2 | PREDICTED: UPF0552 protein C15orf38 homolog isoform 2 [Sus scrofa]. | 295 | 3e-80 | |
|
| LOC100514408 | PREDICTED: AP-2 complex subunit sigma-like [Sus scrofa]. | 114 | 1e-25 | O |
|
| LOC100624239 | PREDICTED: AP-1 complex subunit sigma-1A-like [Sus scrofa]. | 108 | 6e-24 | O |
|
| LOC100517795 | PREDICTED: AP-1 complex subunit sigma-2-like [Sus scrofa]. | 107 | 1e-23 | O |
|
| LOC100627432 | PREDICTED: hypothetical protein LOC100627432 [Sus scrofa]. | 105 | 5e-23 | |
|
| AP4S1 | AP-4 complex subunit sigma-1 [Sus scrofa]. | 104 | 1e-22 | O |
|
| LOC100626549 | PREDICTED: AP-1 complex subunit sigma-2-like [Sus scrofa]. | 65.1 | 7e-11 | O |
|
| LOC100625532 | PREDICTED: AP-1 complex subunit sigma-2-like [Sus scrofa]. | 65.1 | 7e-11 | O |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
20110601C-002529 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SPL01_0027_C01.b : attttgcgtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0049_G03.b :
SPL01_0077_A12.b :
UTR01_0052_D07.b :
KDN01_0095_E09.b :
KDN01_0041_E11.b :
20110601C-002529 : ........................CAGGCCCCGCCCCACCCAAGCCCCGCCCCGCAGCCT
---------+---------+---------+---------+---------+---------+ 36
SPL01_0027_C01.b : xxxxxxxxxxxxxxxxxxxxxxxxCAGGCCCCGCCCCACCCAAGCCCCGCCCCGCAGCCT
ILNT1_0049_G03.b : nnccgacagtagaggxxxx
SPL01_0077_A12.b : nnggctaggacttaaacxxxxxx
UTR01_0052_D07.b : caxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0095_E09.b :
KDN01_0041_E11.b :
20110601C-002529 : GGAGGCGCGCGCGCGCGCGCGCGTGCGGGAGGGGGCGGGTGGGGAAGGATCGCCAGAGAG
---------+---------+---------+---------+---------+---------+ 96
SPL01_0027_C01.b : GGAGgcgcgcgcgcgcgcgcgcgtgcgGGAGGGGGCGGGTGGGGAAGGATCGCCAGAGAG
ILNT1_0049_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggGGGAAGGATCGCCAGAGAG
SPL01_0077_A12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggaGAGAG
UTR01_0052_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGAG
KDN01_0095_E09.b : nnnnncctgcggtggctatggga
KDN01_0041_E11.b : nttcctgctgtggctctggga
20110601C-002529 : ATCCGAGGCGAGCCTCGCGCGCCCGCCCCCGCCCTGGCCCCCAGCTCCCACCCGGTGGGC
---------+---------+---------+---------+---------+---------+ 156
SPL01_0027_C01.b : ATCCGAGGCGAGCCTCGCGCGCCCGCCCCCGCCCTGGCCCCCAGCTCCCACCCGGTGGGC
ILNT1_0049_G03.b : ATCCGAGGCGAGCCTCGCGCGCCCGCCCCCGCCCTGGCCCCCAGCTCCCACCCGGTGGGC
SPL01_0077_A12.b : ATCCGAGGCGAGCCTCGCGCGCCCGCCCCCGCCCTGGCCCCCAGCTCCCACCCGGTGGGC
UTR01_0052_D07.b : ATCCGAGGCGAGCCTCGCGCGCCCGCCCCCGCCCTGGCCCCCAGCTCCCACCCGGTGGGC
KDN01_0095_E09.b : gatCGAGGCGAGCCTCGCGCGCCCGCCCCCGCCCTGGCCCCCAGCTCCCACCCGGTGGGC
KDN01_0041_E11.b : gatCGAGGCGAGCCTCGCGCGCCCGCCCCCGCCCTGGCCCCCAGCTCCCACCCGGTGGGC
20110601C-002529 : CCGGCTCAGCCATGATCAAGGCGATCCTCATCTTTAATAACCACGGGAAGCCGCGGCTCT
---------+---------+---------+---------+---------+---------+ 216
SPL01_0027_C01.b : CCGGCTCAGCCATGATCAAGGCGATCCTCATCTTTAATAACCACGGGAAGCCGCGGCTCT
ILNT1_0049_G03.b : CCGGCTCAGCCATGATCAAGGCGATCCTCATCTTTAATAACCACGGGAAGCCGCGGCTCT
SPL01_0077_A12.b : CCGGCTCAGCCATGATCAAGGCGATCCTCATCTTTAATAACCACGGGAAGCCGCGGCTCT
UTR01_0052_D07.b : CCGGCTCAGCCATGATCAAGGCGATCCTCATCTTTAATAACCACGGGAAGCCGCGGCTCT
KDN01_0095_E09.b : CCGGCTCAGCCATGATCAAGGCGATCCTCATCTTTAATAACCACGGGAAGCCGCGGCTCT
KDN01_0041_E11.b : CCGGCTCAGCCATGATCAAGGCGATCCTCATCTTTAATAACCACGGGAAGCCGCGGCTCT
20110601C-002529 : CCAAGTTCTACCAGCCCTACAGTGAAGATACACAACAGCAAATCATCAGGGAGACATTCC
---------+---------+---------+---------+---------+---------+ 276
SPL01_0027_C01.b : CCAAGTTCTACCAGCCCTACAGTGAAGATACACAACAGCAAATCATCAGGGAGACATTCC
ILNT1_0049_G03.b : CCAAGTTCTACCAGCCCTACAGTGAAGATACACAACAGCAAATCATCAGGGAGACATTCC
SPL01_0077_A12.b : CCAAGTTCTACCAGCCCTACAGTGAAGATACACAACAGCAAATCATCAGGGAGACATTCC
UTR01_0052_D07.b : CCAAGTTCTACCAGCCCTACAGTGAAGATACACAACAGCAAATCATCAGGGAGACATTCC
KDN01_0095_E09.b : CCAAGTTCTACCAGCCCTACAGTGAAGATACACAACAGCAAATCATCAGGGAGACATTCC
KDN01_0041_E11.b : CCAAGTTCTACCAGCCCTACAGTGAAGATACACAACAGCAAATCATCAGGGAGACATTCC
20110601C-002529 : ATTTGGTGTCTAAGAGGGATGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTG
---------+---------+---------+---------+---------+---------+ 336
SPL01_0027_C01.b : ATTTGGTGTCTAAGAGGGATGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTG
ILNT1_0049_G03.b : ATTTGGTGTCTAAGAGGGATGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTG
SPL01_0077_A12.b : ATTTGGTGTCTAAGAGGGATGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTG
UTR01_0052_D07.b : ATTTGGTGTCTAAGAGGGATGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTG
KDN01_0095_E09.b : ATTTGGTGTCTAAGAGGGATGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTG
KDN01_0041_E11.b : ATTTGGTGTCTAAGAGGGATGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTG
20110601C-002529 : GAGGATCTGACAACAAACTGATTTATAGACATTATGCAACATTGTATTTTGTCTTCTGTG
---------+---------+---------+---------+---------+---------+ 396
SPL01_0027_C01.b : GAGGATCTGACAACAAACTGATTTATAGACATTATGCAACATTGTATTTTGTCTTCTGTG
ILNT1_0049_G03.b : GAGGATCTGACAACAAACTGATTTATAGACATTATGCAACATTGTATTTTGTCTTCTGTG
SPL01_0077_A12.b : GAGGATCTGACAACAAACTGATTTATAGACATTATGCAACATTGTATTTTGTCTTCTGTG
UTR01_0052_D07.b : GAGGATCTGACAACAAACTGATTTATAGACATTATGCAACATTGTATTTTGTCTTCTGTG
KDN01_0095_E09.b : GAGGATCTGACAACAAACTGATTTATAGACATTATGCAACATTGTATTTTGTCTTCTGTG
KDN01_0041_E11.b : GAGGATCTGACAACAAACTGATTTATAGACATTATGCAACATTGTATTTTGTCTTCTGTG
20110601C-002529 : TGGATTCTTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACAT
---------+---------+---------+---------+---------+---------+ 456
SPL01_0027_C01.b : TGGATTCTTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACAT
ILNT1_0049_G03.b : TGGATTCTTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACAT
SPL01_0077_A12.b : TGGATTCTTCAGAAAGTAAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACAT
UTR01_0052_D07.b : TGGATTCTTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACAT
KDN01_0095_E09.b : TGGATTCTTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACAT
KDN01_0041_E11.b : TGGATTCTTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACAT
20110601C-002529 : TAGACAAGTGTTTTGAAAATGTCTGTGAACTGGATTTAATTTTCCATGTAGATAAGGTTC
---------+---------+---------+---------+---------+---------+ 516
SPL01_0027_C01.b : TAGACAAGTGTTTTGAAAATGTCTGTGAACTGGATTTAATTTTCCATGTAGATAAGGTTC
ILNT1_0049_G03.b : TAGACAAGTGTTTTGAAAATGTCTGTGAACTGGATTTAATTTTCCATGTAGATAAGGTTC
SPL01_0077_A12.b : TAGACAAGTGTTTTGAAAATGTCTGTGAACTGGATTTAATTTTCCATGTAGATAAGGTTC
UTR01_0052_D07.b : TAGACAAGTGTTTTGAAAATGTCTGTGAACTGGATTTAATTTTCCATGTAGATAAGGTTC
KDN01_0095_E09.b : TAGACAAGTGTTTTGAAAATGTCTGTGAACTGGATTTAATTTTCCATGTAGATAAGGTTC
KDN01_0041_E11.b : TAGACAAGTGTTTTGAAAATGTCTGTGAACTGGATTTAATTTTCCATGTAGATAAGGTTC
20110601C-002529 : ACAATATTCTTGCAGAAATGGTGATGGGAGGAATGGTATTGGAGACCAACATGAATGAGA
---------+---------+---------+---------+---------+---------+ 576
SPL01_0027_C01.b : ACAATATTCTTGCAGAAATGGTGATGGGAGGAATGGTATTGGAGACCAACATGGATGAGA
ILNT1_0049_G03.b : ACAATATTCTTGCAGAAATGGTGATGGGAGGAATGGTATTGGAGACCAACATGAATGAGA
SPL01_0077_A12.b : ACAATATTCTTGCAGAAATGGTGATGGGAGGAATGGTATTGGAGACCAACATGAATGAGA
UTR01_0052_D07.b : ACAATATTCTTGCAGAAATGGTGATGGGAGGAATGGTATTGGAGACCAACATGAATGAGA
KDN01_0095_E09.b : ACAATATTCTTGCAGAAATGGTGATGGGAGGAATGGTATTGGAGACCAACATGAATGAGA
KDN01_0041_E11.b : ACAATATTCTTGCAGAAATGGTGATGGGAGGAATGGTATTGGAGACCAACATGAATGAGA
20110601C-002529 : TTGTTACACAAATTGATGCGCAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAG
---------+---------+---------+---------+---------+---------+ 636
SPL01_0027_C01.b : TTGTCACACAAATTGATGCGCAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAG
ILNT1_0049_G03.b : TTGTTACACAAATTGATGCGCAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAG
SPL01_0077_A12.b : TTGTCACACAAATTGATGCGCAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAG
UTR01_0052_D07.b : TTGTTACACAAATTGATGCGCAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAG
KDN01_0095_E09.b : TTGTTACACAAATTGATGCGCAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAG
KDN01_0041_E11.b : TTGTTACACAAATTGATGCGCAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAG
20110601C-002529 : CTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATA
---------+---------+---------+---------+---------+---------+ 696
SPL01_0027_C01.b : CTCCAGCCCGTGCTGTATCAGCTGTAAAGAATGTGAATCTTCCTGAGATCCCAAGAAATA
ILNT1_0049_G03.b : CTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATA
SPL01_0077_A12.b : CTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATA
UTR01_0052_D07.b : CTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATA
KDN01_0095_E09.b : CTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATA
KDN01_0041_E11.b : CTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATA
20110601C-002529 : TTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCTTTTAAATAAAAAATTT
---------+---------+---------+---------+---------+---------+ 756
SPL01_0027_C01.b : TTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCTTTTNAATAAAAAATTT
ILNT1_0049_G03.b : TTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCttttaaataaaaaattt
SPL01_0077_A12.b : TTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCttttaaataaaaaattt
UTR01_0052_D07.b : TTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCttttaaataaaaaattt
KDN01_0095_E09.b : TTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCttttaaataaaaaattt
KDN01_0041_E11.b : TTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCttttaaataaaaaattt
20110601C-002529 : AAAAGGCCACTCCCAGGTAAAATCCAGGGGGAAGAGTCATCTAAGTTTACCATGCAGTTG
---------+---------+---------+---------+---------+---------+ 816
SPL01_0027_C01.b : AAAAGGCCACTCCCAGGTAAAATCCAGGGGGAAGAGTCATCTAAGTTTA
ILNT1_0049_G03.b : aaaaGGCCACTCCCAGGTAAAATCCAGGGGGAAGAGTCATCTAAGTTTACCATGCAGTTG
SPL01_0077_A12.b : aaaaGGCCACTCCCAGGTAAAATCCAGGGGGAAGAGTCATCTAAGTTTACCATGCAGTTG
UTR01_0052_D07.b : aaaaGGCCACTCCCAGGTAAAATCCAGGGGGAAGAGTCATCTAAGTTTACCATGCAGTTG
KDN01_0095_E09.b : aaaaGGCCACTCCCAGGTAAAATCCAGGGGGAAGAGTCATCTAAGTTTACCATGCAGTTG
KDN01_0041_E11.b : aaaaGGCCACTCCCAGGTAAAATCCAGGGGGAAGAGTCATCTAAGTTTACCATGCAGTTG
20110601C-002529 : TTTACCAAAAATAGAGGAGGAGAGTCTTAACTTTTGCTCTTGGATTTAAGTCAAGGTACT
---------+---------+---------+---------+---------+---------+ 876
SPL01_0027_C01.b :
ILNT1_0049_G03.b : TTTACCAAAAATAGAAGAAGAGAGTCTTAACTTTTGCTCTTGGATTTAAGTCAAGGTACT
SPL01_0077_A12.b : TTTACCAAAAATAGAGGAAGAGAGTCTTAACTTTTGCTCTTGGATTTAAGTCAAGGTACT
UTR01_0052_D07.b : TTTACCAAAAATAGAGGAGGAGAGTCTTAACTTTTGCTCTTGGATT*AAGTCAAGGTACT
KDN01_0095_E09.b : TTTACCAAAAATAGAGGAGGAGAGTCTTAACTTTTGCTCTTGGATTTAAGTCAAGGTACT
KDN01_0041_E11.b : TTTACCAAAAATAGAGGAGGAGAGTCTTAACTTTTGCTCTTGGATTTAAGTCAAGGTACT
20110601C-002529 : GTATAGAAGTTATGTAAAATCTGTATCGAAGTTCAACATTG*CTTTTCTTGCTCAGTG*A
---------+---------+---------+---------+---------+---------+ 934
SPL01_0027_C01.b :
ILNT1_0049_G03.b : GTATAGAAATTATGTAAAATCTGTATCGAAGTTCAACATTG*CTTTTCTTGCTCAGTG*A
SPL01_0077_A12.b : GTATAGAAGTTATGTAAAATCTGTATCGAAGTTTCACCTTG*CTTTTCTTGCTCAGGGAA
UTR01_0052_D07.b : GTATAGAAGTTATGTAAAATCTGTATCGAAGTTCAACATTGGCTTTTCTTGCCCAGTG*A
KDN01_0095_E09.b : GTATAGAAGTTATGTAAAATCTGTATCGAAGTTCAACATTG*CTTTTCTTGCTCAGTG*A
KDN01_0041_E11.b : GTATAGAAGTTATGTAAAATCTGTATCGAAGTTCAACATTG*CTTTTCTTGCTCAGTG*A
20110601C-002529 : TTTTGAAGAAATTGAGTAGTTCCAAGT*GTGATTTTTTCTTTCTTTTCTAAACTGCATTC
---------+---------+---------+---------+---------+---------+ 993
SPL01_0027_C01.b :
ILNT1_0049_G03.b : TTTTGAAGAAATTGAATAATTCCAAGT*GTGATTTTTTCTTTTCTTTTCAAACGGCATTC
SPL01_0077_A12.b : TTTTGAAAAAATGGAGTAGTTCCCAGTTGTGATTTTTCCTTTCTTTTCAAAACCGCATTC
UTR01_0052_D07.b : TTTTGAAGAAATTGAGTAATTCCAAGT*GTGAATTTTTCTTTCTTTTCTAAACTGCATTC
KDN01_0095_E09.b : TTTTGAAGAAATTGAGTAGTTCCAAGTGTGATTTTTTTCTTTCTTTTCTAAACTGCATTC
KDN01_0041_E11.b : TTTTGAAGAAATTGAGTAGTTCCAAGT*GTGATTTTTTTCTTTCTTTCTAAACTGCATTC
20110601C-002529 : CTATGGCCACCTAAGGCATGCCTCTATGTATTGGCTACTACAGTATTCCGAAAA*GTGTT
---------+---------+---------+---------+---------+---------+ 1052
SPL01_0027_C01.b :
ILNT1_0049_G03.b : CTATGGCC*CCTAAGGCATGCCTCTATGTATTGGCTACAAAAGTATTCCCAAAA*GTGTT
SPL01_0077_A12.b : CTAatgggccacctaaggaatgccctctatgtattgggctacttacagtattccgaaaaa
UTR01_0052_D07.b : CTATGGCCACCTAAGGCATGCCTCTATGTAatgggctactacaggatttccaaaagtggt
KDN01_0095_E09.b : CTATGGCCACCTAAGGCATGCCTCTATGTATTGGCTACTACAGTATTCCGAAAAAGTGTT
KDN01_0041_E11.b : CTATGGCCACCTAAAGCATGCCTCTATGTATTGGCTACTACAGTATTCCGAAAG*TGTTT
20110601C-002529 : TGAGACATCTCTTTAAATTATGTACAACCCAAAATGTTGGTGTTTTGAATGGATCAAAGT
---------+---------+---------+---------+---------+---------+ 1112
SPL01_0027_C01.b :
ILNT1_0049_G03.b : tgaaaattctcttaaataagtacaacccaaatgtgggggtttgtatgaataaaaatggcc
SPL01_0077_A12.b : gtggttttgaaaaatcccctttataattttgttacaacccaaaaatgttgggtgtttttg
UTR01_0052_D07.b : ttggaaacatctcctttaaattatgaacaacccaaaaagttgggggttttggaaggaatc
KDN01_0095_E09.b : TGAGACATCTCTTTAAATTATGTACAACCCAAAATG*TGGTGTTTTGTATGGATCCNAGT
KDN01_0041_E11.b : TGAGACATCTCTTTAAATTATGTACAACCCAAAATGTTGGTGTTTTGAATGGATCAAAGT
20110601C-002529 : GCAGCGTTCCTTAATTCCTTCTGTTATCTGTCACAATTGT....................
---------+---------+---------+---------+---------+---------+ 1152
SPL01_0027_C01.b :
ILNT1_0049_G03.b : cgtccctattcccttcggtaacggccaaatgttatttaaaaaccaagttggtatggcggg
SPL01_0077_A12.b : gaagggaatcaaaaagtggcacccgttc
UTR01_0052_D07.b : ccaaatggcaacgttcccttatttcccttccgttatccggtcccaattggtaatttaaaa
KDN01_0095_E09.b : GCAGCGTTCCTTAATTCCcttctgttactggcacaattgtaattaaagaaccagtatgtt
KDN01_0041_E11.b : GCAGCGTTCCTTAATTCCTTCTGTTATCTGTCACAATTGTatttaagaaacaagtatgta
20110601C-002529 : ............................................................
---------+---------+---------+---------+---------+---------+ 1152
SPL01_0027_C01.b :
ILNT1_0049_G03.b : aaccttaacacttttcccttatttaaaaaaccccgggaacggggcttcaaacccttttgg
SPL01_0077_A12.b :
UTR01_0052_D07.b : aaaacccaatatagtatttggcaagaaaaaactttaaaaaacttttttcccccttaattt
KDN01_0095_E09.b : ttgcatgaaacattataccctttctcctaattaaaaaactccaggtaaatgaacttctaa
KDN01_0041_E11.b : ttgcatgaaaacatataaccttttcctctagtttaataaactccaagtaactgaactcta
20110601C-002529 : ............................................................
---------+---------+---------+---------+---------+---------+ 1152
SPL01_0027_C01.b :
ILNT1_0049_G03.b : ttgccggaaaacacttaaaaaaattttttataaccctggaccccaagaaaaaaaaaatat
SPL01_0077_A12.b :
UTR01_0052_D07.b : ttaaaaaaaacctcccaagaggtaaacgggggaaaaaaaaaaaaaaaaaa
KDN01_0095_E09.b : gccctttcgtttgnggaaatcacttgccaaattttttagacccttgaactccaagaaata
KDN01_0041_E11.b : aagcacttctgtttggcgaatacaattaaacaaaatttttttatgaccctctgaccacaa
20110601C-002529 : ............................................................
---------+---------+---------+---------+---------+---------+ 1152
SPL01_0027_C01.b :
ILNT1_0049_G03.b : tttccctgtcccaanaaaaaagaaacacgaaacaagaaataagagangagcnggacccnc
SPL01_0077_A12.b :
UTR01_0052_D07.b :
KDN01_0095_E09.b : agtattttttccgtgtcaaaaaaaaaaagggcatggccaattgaggcggcccaaataata
KDN01_0041_E11.b : agaaataaagataattttatcctgttcaaaaaaaaaaaaaaaggccattgggtcgaactg
20110601C-002529 : ............................................................
---------+---------+---------+---------+---------+---------+ 1152
SPL01_0027_C01.b :
ILNT1_0049_G03.b : acaccccccgggcctttctgcgagggagccgagacgaaaaagnagaaagagcacacaccg
SPL01_0077_A12.b :
UTR01_0052_D07.b :
KDN01_0095_E09.b : aaaaaaccccaaccccgaaccgaaaaaaaaagaatggtgtgtacgtttgccctagggaaa
KDN01_0041_E11.b : aggccggccgtttaaaatcaaaaaaaaacctcccacactcccggaacggaaaaaaaaaag
20110601C-002529 : ............................................................
---------+---------+---------+---------+---------+---------+ 1152
SPL01_0027_C01.b :
ILNT1_0049_G03.b : gtagaaaaaatttttagttttttttttt
SPL01_0077_A12.b :
UTR01_0052_D07.b :
KDN01_0095_E09.b : aaacaacccaattcacaaatttttcgccctggggggccaacaaacta
KDN01_0041_E11.b : agatgtttgtttaccttt
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