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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-002778

Length: 1,025

Sequence [FASTA format sequence]
TTCGGCCGGA AGCGGAAGTC CCGCTCAGAG GGTTGAGTGG CGGCGGGGAG TTGAGGGCCC
TGGTGGTGTT CGGATACACG TGGAGCTGCG GTGGGCGGGC AGCGGCCGGA CAGCCGGAGG
CGGCGGCGGC GGCGAGGGGC ACCCTTTTGT AGCCGCGGAG ACCTAGGGCT CCGCTGCCTC
CTCCGGCGGG TGTGGACGTG CGCTTTGCGA GATGGATACT CCCCCGCTCT CAGGTTCGGA
TTCCGATTCT GATGACTCTC TGGTCACCGA CCGAGAGTTG CAGGACGCGT TTTCCCGGGG
GCTCTTGAAG CCAGGCCTCA ACGTGGTGTT AGAGGGGCCG AAGAAGGCCG TGAACGACGT
GAATGGCCTG AAGCAGTGTC TGGGCGAATT TAAGCGGGAT CTGGAGTGGG TTGAAAGGCT
CGACGTGACC CTGGGTCCGG TGCCGGAAGT CACTGCCCCT CAGTCAGCCT CCCAGAGCAA
GGATCCGAAA GCTGTTGATC CAGAAGACGA CTTCCAGCGT GAGATGAGCT TCTACCGTCA
GGCCCAGGCA GCAGTGCTTG CGGTACTGCC CCGCCTCCAT CAGCTCAAAG TCCCTACCAA
GCGGCCCACG GACTATTTTG CAGAGATGGC CAAGACCGAT CAGCAGATGC AGAAGATTCG
ACAGAAGCTG CAGGCTAAAC AGGCGGCCAT GGAGAAGTCA GAAAAGGCTA AGCAACTGCG
AGCACTCAGG AAATACGGAA AGAAGGTGCA AACAGAGGTC CTTCAGAAGC GGCAGCGGGA
GAAAGCCCAC ATGATGAGCG CCATCAAGAA GTACCAGAAA GGCTTCTCTG ACAAGCTGGA
CTTCCTCGAG GGAGATCAGA AGCCTGTTGC GCGGAGCACG AAGGACGGAG CCAAGGGCCA
GCAGATGAAG AGGGGGCCCA ATGCCAACGA CGCTATAAAA ACCAGGAAGT TTGGTTACGG
TGGGAAGAAG AAAGGCCTCC AGTGGGATAC TCCCGAGAGC TATGACGATG TGTCCAGCTT
CCGGG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinEBNA1BP2probable rRNA-processing protein EBP2 isoform 1 [Homo sapiens]. 451e-127O
Contig/Assembly ProteinEBNA1BP2probable rRNA-processing protein EBP2 isoform 2 [Homo sapiens]. 449e-126O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinEbna1bp2probable rRNA-processing protein EBP2 [Mus musculus]. 439e-123O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC475391PREDICTED: similar to Probable rRNA processing protein EBP2 (EBNA1 binding protein 2) (Nucleolar protein p40) [Canis familiaris]. 468e-132O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinEBNA1BP2probable rRNA-processing protein EBP2 [Bos taurus]. 478e-135O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100520256PREDICTED: probable rRNA-processing protein EBP2-like [Sus scrofa]. 500e-142O
Contig/Assembly ProteinLOC100518134PREDICTED: probable rRNA-processing protein EBP2-like [Sus scrofa]. 500e-142O


Assembly Members: 11      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
BMWN10078H06BMWN1_0078_H06.bHX210393 
ILNT10076F06ILNT1_0076_F06.bHX232833 
ITT010094E10ITT01_0094_E10.bBW984362 
LVRM10072C10LVRM1_0072_C10.bBP450343 AK233039
OVR010017B07OVR01_0017_B07.bBP141915 
OVR010100E07OVR01_0100_E07.bBW968154 AK347801
OVRM10029H04OVRM1_0029_H04.bBP154013 
PTG010110F05PTG01_0110_F05.bFS713328 AK397165
SPLT10020H02SPLT1_0020_H02.bHX240778 
SPLT10081F06SPLT1_0081_F06.bHX245535 
THY010081G10THY01_0081_G10.bBP167844 

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
150C320.455W-
T600.545
195A200.182W-
G720.818
301C300.273WSGGC/G
G620.727GGG/G


Alignment:      TOP

20110601C-002778 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
PTG01_0110_F05.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxxxxxx
LVRM1_0072_C10.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0094_E10.b : nnnnaatgaaacaxxxxxxxxxxx
ILNT1_0076_F06.b : nnccacggtacgxxxxxxxxxxxxxx
SPLT1_0081_F06.b : nnnccgcggttagacgccxxxxxxxxx
OVR01_0017_B07.b : ttggggggcacctatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0100_E07.b :
BMWN1_0078_H06.b : nnaaacgatggtacgcgg
OVRM1_0029_H04.b : cxxxxxxxxxxxxx
SPLT1_0020_H02.b : nn
THY01_0081_G10.b : ccatttgggtggxxxxxxxxxxxxxx
20110601C-002778 : ........TTCGGCCGGAAGCGGAAGTCCCGCTCAGAGGGTTGAGTGGCGGCGGGGAGTT
---------+---------+---------+---------+---------+---------+ 52
PTG01_0110_F05.b : xxxxxxxxTTCGGCCGGAAGCGGAAGTCCCGCTCAGGGGGTTGAGTGGCGGCGGGGAGTT
LVRM1_0072_C10.b : xxxxxxxxxxxxxxcggaAGCGGAAGTCCCGCTGAGAGGGTTGACTGGCGGCGGGGAGTT
ITT01_0094_E10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCAGAGGGTTGAGTGGCGGCGGGGAGGT
ILNT1_0076_F06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgAGAGGGTTGAGTGGCGGCGGGGAGTT
SPLT1_0081_F06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGGGTTGAGTGGCGGCGGGGAGTT
OVR01_0017_B07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGGGTTGAGTGGCGGCGGGGAGTT
OVR01_0100_E07.b : ccttAGGGTCGAGTGGCGGCGGGGAGTT
BMWN1_0078_H06.b : ccgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgGTGGCGGCGGGGAGGT
OVRM1_0029_H04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGCGGGGAGTT
SPLT1_0020_H02.b : nnncgacggtacacgccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxg
THY01_0081_G10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-002778 : GAGGGCCCTGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
---------+---------+---------+---------+---------+---------+ 112
PTG01_0110_F05.b : GAGGGCCCTGGTGGTGTTCGGATAC*CGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
LVRM1_0072_C10.b : GAGGGCCCTGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
ITT01_0094_E10.b : GAGGGCCCCGGTGGTGTTCGGATAC*CGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
ILNT1_0076_F06.b : GAGGGCCCTGGTGGTGTTCGGATAC*CGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
SPLT1_0081_F06.b : GAGGGCCCTGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
OVR01_0017_B07.b : GAGGGCCCTGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
OVR01_0100_E07.b : GAGGGCCCTGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCGGCCAGCGGCCGGACA
BMWN1_0078_H06.b : GAGGGCCCCGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCTGCCAGCGGCCGGACA
OVRM1_0029_H04.b : GAGGGCCCTGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
SPLT1_0020_H02.b : GAGGGCCCCGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
THY01_0081_G10.b : GAGGGCCCTGGTGGTGTTCGGATACACGTGGAGCTGCGGTGGGCGGGCAGCGGCCGGACA
20110601C-002778 : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGTAGCCGCGGAGACCTAGGGCTCC
---------+---------+---------+---------+---------+---------+ 172
PTG01_0110_F05.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGTAGCCGCGGAGACCTAGGGCTCC
LVRM1_0072_C10.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGCAGCCGCGGAGACCTAGGGCTCC
ITT01_0094_E10.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGCAGCCGCGGAGACCTAGGGCTCC
ILNT1_0076_F06.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGTAGCCGCGGAGACCTAGGGCTCC
SPLT1_0081_F06.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGTAGCCGCGGAGACCTAGGGCTCC
OVR01_0017_B07.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGTAGCCGCGGAGACCTAGGGCTCC
OVR01_0100_E07.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTCTTGTAGCCGCGGAGACCTAGGGCTCC
BMWN1_0078_H06.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGCAGCCGCGGAGACCTAGGGCTCC
OVRM1_0029_H04.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGCAGCCGCGGAGACCTAGGGCTCC
SPLT1_0020_H02.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGCAGCAGCGGAGACCTAGGGCTCC
THY01_0081_G10.b : GCCGGAGGCGGCGGCGGCGGCGAGGGGCACCCTTTTGTAGCCGCGGAGACCTAGGGCTCC
20110601C-002778 : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
---------+---------+---------+---------+---------+---------+ 232
PTG01_0110_F05.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
LVRM1_0072_C10.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
ITT01_0094_E10.b : GCTGCCTCCTCCGGCGGGTGTGAACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
ILNT1_0076_F06.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
SPLT1_0081_F06.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
OVR01_0017_B07.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
OVR01_0100_E07.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
BMWN1_0078_H06.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
OVRM1_0029_H04.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
SPLT1_0020_H02.b : GCTGCCTCCTCCGGCGGGTGTGAACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
THY01_0081_G10.b : GCTGCCTCCTCCGGCGGGTGTGGACGTGCGCTTTGCGAGATGGATACTCCCCCGCTCTCA
20110601C-002778 : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
---------+---------+---------+---------+---------+---------+ 292
PTG01_0110_F05.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
LVRM1_0072_C10.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
ITT01_0094_E10.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
ILNT1_0076_F06.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
SPLT1_0081_F06.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
OVR01_0017_B07.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
OVR01_0100_E07.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
BMWN1_0078_H06.b : GGTTCGGATTCCGATTCCGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
OVRM1_0029_H04.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
SPLT1_0020_H02.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
THY01_0081_G10.b : GGTTCGGATTCCGATTCTGATGACTCTCTGGTCACCGACCGAGAGTTGCAGGACGCGTTT
20110601C-002778 : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
---------+---------+---------+---------+---------+---------+ 352
PTG01_0110_F05.b : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
LVRM1_0072_C10.b : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
ITT01_0094_E10.b : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
ILNT1_0076_F06.b : TCCCGGGGCCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
SPLT1_0081_F06.b : TCCCGGGGCCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
OVR01_0017_B07.b : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
OVR01_0100_E07.b : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
BMWN1_0078_H06.b : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
OVRM1_0029_H04.b : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
SPLT1_0020_H02.b : TCCCGGGGGCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
THY01_0081_G10.b : TCCCGGGGCCTCTTGAAGCCAGGCCTCAACGTGGTGTTAGAGGGGCCGAAGAAGGCCGTG
20110601C-002778 : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
---------+---------+---------+---------+---------+---------+ 412
PTG01_0110_F05.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
LVRM1_0072_C10.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
ITT01_0094_E10.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
ILNT1_0076_F06.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
SPLT1_0081_F06.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
OVR01_0017_B07.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
OVR01_0100_E07.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
BMWN1_0078_H06.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
OVRM1_0029_H04.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
SPLT1_0020_H02.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
THY01_0081_G10.b : AACGACGTGAATGGCCTGAAGCAGTGTCTGGGCGAATTTAAGCGGGATCTGGAGTGGGTT
20110601C-002778 : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
---------+---------+---------+---------+---------+---------+ 472
PTG01_0110_F05.b : GAAAGGTTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
LVRM1_0072_C10.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
ITT01_0094_E10.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
ILNT1_0076_F06.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
SPLT1_0081_F06.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
OVR01_0017_B07.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
OVR01_0100_E07.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCGGCCTCC
BMWN1_0078_H06.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
OVRM1_0029_H04.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
SPLT1_0020_H02.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
THY01_0081_G10.b : GAAAGGCTCGACGTGACCCTGGGTCCGGTGCCGGAAGTCACTGCCCCTCAGTCAGCCTCC
20110601C-002778 : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
---------+---------+---------+---------+---------+---------+ 532
PTG01_0110_F05.b : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
LVRM1_0072_C10.b : CAGAGCAAGGATCAGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
ITT01_0094_E10.b : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
ILNT1_0076_F06.b : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
SPLT1_0081_F06.b : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
OVR01_0017_B07.b : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
OVR01_0100_E07.b : CAGAGCAAGGATCCGAATGCTGTTGATCCAGATGACGACTTCCAGCGTGAGATGAGCTT*
BMWN1_0078_H06.b : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
OVRM1_0029_H04.b : CAGAGCAAGGATCAGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
SPLT1_0020_H02.b : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
THY01_0081_G10.b : CAGAGCAAGGATCCGAAAGCTGTTGATCCAGAAGACGACTTCCAGCGTGAGATGAGCTTC
20110601C-002778 : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
---------+---------+---------+---------+---------+---------+ 592
PTG01_0110_F05.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
LVRM1_0072_C10.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTNCAAGTC
ITT01_0094_E10.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
ILNT1_0076_F06.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
SPLT1_0081_F06.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
OVR01_0017_B07.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
OVR01_0100_E07.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCCGTACTGCCCCGCCTCCATCAGCTCAAAGTT
BMWN1_0078_H06.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
OVRM1_0029_H04.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGCACTGCCCCGCCTCCATCAGCTCAAAGTC
SPLT1_0020_H02.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
THY01_0081_G10.b : TACCGTCAGGCCCAGGCAGCAGTGCTTGCGGTACTGCCCCGCCTCCATCAGCTCAAAGTC
20110601C-002778 : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
---------+---------+---------+---------+---------+---------+ 652
PTG01_0110_F05.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
LVRM1_0072_C10.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCGAGACCGATCAGCAGATGCAG
ITT01_0094_E10.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
ILNT1_0076_F06.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
SPLT1_0081_F06.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
OVR01_0017_B07.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
OVR01_0100_E07.b : CTCTACAAGCGGCCCACGGACTATTTTGCATAGATGGCCCTGACCCATCCGCTGATGCCG
BMWN1_0078_H06.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
OVRM1_0029_H04.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
SPLT1_0020_H02.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
THY01_0081_G10.b : CCTACCAAGCGGCCCACGGACTATTTTGCAGAGATGGCCAAGACCGATCAGCAGATGCAG
20110601C-002778 : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
---------+---------+---------+---------+---------+---------+ 711
PTG01_0110_F05.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
LVRM1_0072_C10.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCATGGGAGAAGTCAGAAAAGGCTAA
ITT01_0094_E10.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
ILNT1_0076_F06.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
SPLT1_0081_F06.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
OVR01_0017_B07.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
OVR01_0100_E07.b : AAGATTCTTTCGAAGCTGCATGCTAATCAGGCGGtcctgataaatttcgaaagtgttttc
BMWN1_0078_H06.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
OVRM1_0029_H04.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGGCTA
SPLT1_0020_H02.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
THY01_0081_G10.b : AAGATTCGACAGAAGCTGCAGGCTAAACAGGCGGCCAT*GGAGAAGTCAGAAAAGGCTAA
20110601C-002778 : GCAACTGCGAGCACTCAGGAAATACGGAAAGAAGGTGCAAACAGAGGTCCTTCAGAAGCG
---------+---------+---------+---------+---------+---------+ 771
PTG01_0110_F05.b : GCAACTGCGAGCACTCAGGAAATACGGAAAGAAGGGTGCAACAGAGGTCCTTCAGAAGCG
LVRM1_0072_C10.b : GGCACTGCGAGCACTCAGGGAAATACGGAAGAAGGTGCAAACAGAGGT
ITT01_0094_E10.b : GCAACTGCGAGCACTCAGGAAATACGGAAAGAAGGTGCAAACAGAGGTCCTTCAGAAGCG
ILNT1_0076_F06.b : CCAACTGCGAGCACTCANGAAATACGGGAAAAAGGTGCAAACAGAGGTCCTTCAGAAGCG
SPLT1_0081_F06.b : GCAACTGCGAGCACTCAGGAAATACGGAAAGAAGGTGCAAACAGAGGTCCTTCAGAAGCG
OVR01_0017_B07.b : GCAACTGCGAGCACTCAGGAAATACGGAAAGAAGGTGCAAACAGAGGTCCTTCAGAAGCG
OVR01_0100_E07.b : aactgccagcattccggacattccgaaagtacggtgccaactgaggttccttctaattcg
BMWN1_0078_H06.b : GCAACTGCGAGCACTCAGGAAAT*CGGAAAGAAGGTGCAAACAGAGGTCCTTCAGAAGCG
OVRM1_0029_H04.b : AGCACTGCGAGCACTCAGGAAATACGGAAAGAAGGTGCAAACAGAGGTCCTTCAGAAGCG
SPLT1_0020_H02.b : GCAACTGCGAGCACTCAGGAAATACGGAAAGAGGGTGCAAACAGAGGTCCTTCAAAAACG
THY01_0081_G10.b : GCAACTGCGAGCACTCAGGAAATACGGAAAGAAGGTGCNAACAGAGGTCCTTCAGAAGCG
20110601C-002778 : GCAGCGGG*AGAAAGCCCACATGATGAGCGCCATCAAGAAGTACCAGAAAGGCTTCTCTG
---------+---------+---------+---------+---------+---------+ 830
PTG01_0110_F05.b : GCAGCGGGGAGAAAGCCCACATGATGAGCGCCATCAGGAAGTACCAGAAAGGCTTCTCTN
LVRM1_0072_C10.b :
ITT01_0094_E10.b : GCAGCGGG*AGAAAGCCCACATGATGAGCGCCATCAAGAAGTACCAGAAAGGCTTCTCTG
ILNT1_0076_F06.b : GCAGCGGG*AGAAAGCCCACATGATGAGCGGCTTCAAGAATTAC*ANAAAGGCTTCTCTG
SPLT1_0081_F06.b : GCAGCGGG*AGAAAGCCCACATGATGAGCGCCATCAAGAAGTACCAGAAAGGCTTCTCTG
OVR01_0017_B07.b : GCAGCGGG*AGAAAGCCCACATGATGAGCGCCATCAAGAAGTACCAGAAAGGCTTCTCTG
OVR01_0100_E07.b : tctgcgcgataatagcccccttgatgagtctctcttcgttaaatacctgaaagggcttct
BMWN1_0078_H06.b : GCAGCGGG*AGAAAGCCCACATGATGAGCGCCATCAAGAAGTACCAGAAAGGCTTCTCTG
OVRM1_0029_H04.b : GCAGCTGGGAGA*AGCCCACATGATGAGNCGCCATCAGAAGTACCAGAAAGcttctctga
SPLT1_0020_H02.b : GCAGCGGGGAGA*AGCCCACATGATGAGCGCCATCAAGAAGTACCAAAAAAGCTTCTCTG
THY01_0081_G10.b : GCAGCGGG*AGAAAGCCCACATGATGAGCGCCCATCAGAAGTACCAGAAAGGCTTCTCTG
20110601C-002778 : ACAAGCTGGACTTCCTCGAGGGAGATCAGAAGCCTGTTGCGCGGAGCACGAAGGACGG*A
---------+---------+---------+---------+---------+---------+ 889
PTG01_0110_F05.b : GACAGCTGGACTCCCTCGAGGGAGATCAGAAGCCTGTTGCGCGGAGCACGAGGGACGGAc
LVRM1_0072_C10.b :
ITT01_0094_E10.b : ANCAGCTGGACTTCCTCNGAGGAGATCAGAAGCCTGTTGCGCGNAGCACGAAGGACGGGA
ILNT1_0076_F06.b : AACAGCTGGACTTCCTCCAGGGAAATCAaaacctgttgcccggaacccaaaagacgaccc
SPLT1_0081_F06.b : ACAAGCTGGACTTCCTCGAGGGAGATCAGAAGCCTGTTGCGCGGAGCACGAAGGACNG*A
OVR01_0017_B07.b : ANCAGCTGGACTTCCTCGAGGGAGATCAGAAGCCTGTTGCGCGGAGCACGAAGGACGG*A
OVR01_0100_E07.b : ctgacctgctgtgatttctcgaagggaatatcataaccctgtttcctggaatctgttagg
BMWN1_0078_H06.b : ACAAGCTGGACTTCCTCGAGGGAAACAAAAAGCCTGTTGCGCGGAGCACGAAGGACGG*A
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : ACAACCTGGAACTCCTCGAGGGAAATCAANC*CCTGGTGCCCCGAACACGAAGGACGG*A
THY01_0081_G10.b : NACAGCTGGACTTCCTCGAGGGAGATCAGAAGCCTGTTGCACGGAGCACGAAGGGACGGA
20110601C-002778 : GCCAAGGGCCAGCAGATGAAGAGGGGGCCCAATGCC*AACGACGCTATAAAAACCAGGAA
---------+---------+---------+---------+---------+---------+ 948
PTG01_0110_F05.b : ccagggcccgccaatgaagagggggcccattgccaacgacgctttaaaaacaaaagttgg
LVRM1_0072_C10.b :
ITT01_0094_E10.b : GCCAGGG*CCAGCAGATGAAGAGGGGGCCCAATGCC*AACGACGCTATAAAAACCAGGAA
ILNT1_0076_F06.b : aaggcccacaaataaaaagggccccattccaaacaacccttaaaaaccgaaatttgtttc
SPLT1_0081_F06.b : GCCAAGGGCCAGCAAATGAAGAGGGGGCCCCATGCCAAcgacgctataaaaaccagagtt
OVR01_0017_B07.b : GCCAAGGGCCCGCAGATGAAGAAGGGGGCCAATGCCCAACGACGCTATAAAAAccagaag
OVR01_0100_E07.b : atctatcccggtgtcctcccatgtaataggggccttaatgctatcgatcctttattaccc
BMWN1_0078_H06.b : ACCAAGGGCCCGCCGATGAAGAGGGGGCCCAATGCCAACCGACctattaaaaccaaaatt
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : CCCAAGGCCCACCAAATGAAGAGGGGGCCCAATGgccaacgaacccttaaaaaccaaagt
THY01_0081_G10.b : GCCAGGGGCCCGCAGATGAAGAGGGGGCCCAATGCA*AACGACGCTATAAAAAaccagag
20110601C-002778 : GTTTGGTTACGGTGGGAAGAAGAAAGGCCTCCAGTGGGATACTCCCGAGAGCTATGACGA
---------+---------+---------+---------+---------+---------+ 1008
PTG01_0110_F05.b : gttacggtgggaaaaaaaaggctccaagtggaaaacccccgagactttgacaatgttccc
LVRM1_0072_C10.b :
ITT01_0094_E10.b : GTTTGGTTACGGTGGGAAGAAGAAAGGCCTCCAGTGGGATACTCCCGAGAGCTATGACGA
ILNT1_0076_F06.b : ggttggaaaaaaaaagctccaattggaaattcccgaaacctttacaatttgtccccttcc
SPLT1_0081_F06.b : ttggtacggtgggaaaagaaaggctccagtggaatactcgcaaagctatgacgatgtgtc
OVR01_0017_B07.b : ttttgttacggggggaaagaaaaaaggctccaagtggaatacttcccgaaagctatgacg
OVR01_0100_E07.b : cttaattttgtttccgggcgtaaaataaatggcctcattttcactctcctctttgagctt
BMWN1_0078_H06.b : ttggttacgtgggaaaaaaaaggcttcaagtggaatctccggaaacctatgagattgtgc
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : ttggtttaggtgggaaaaaaaaggctcccattgaaatctcccgaaaactttaacaatttt
THY01_0081_G10.b : ttttggttaacggtgggaagaagaagggctccaaggggaataatcccaaaa
20110601C-002778 : TGTGTCCAGCTTCCGGG...........................................
---------+---------+---------+---------+---------+---------+ 1025
PTG01_0110_F05.b : gcttccgggcaagaaccttccggcaagggccccaaaaagcctggaaaaaaaggtccaata
LVRM1_0072_C10.b :
ITT01_0094_E10.b : TGTGTCCAGCTTCCGGGccaagaccgctcacggcagggcctcagaagcctggaaagaaag
ILNT1_0076_F06.b : ggcccgaatcctcccggaaggccccaaaagcctggaaaaaaggttcaataaaaactggaa
SPLT1_0081_F06.b : agcttccgggcaggactgctcggcaaggcctaagaggcctgaaagaaaggtcaataaaaa
OVR01_0017_B07.b : atgtgtccagccttcccgggccaagacccgcttcacggcaaggggcctccaaaagggcct
OVR01_0100_E07.b : ttacattggtctcttcttccgggcctggactctctctccgtggggtcttcttattgt
BMWN1_0078_H06.b : cacttccgggccagacccctccgggagggccccaaaagccgaaaaaaaggttaataaaaa
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : tccgcttctgggccggaacgcctcacggaagggcctaaaagcctggaaagaaagggctaa
THY01_0081_G10.b :
20110601C-002778 : ............................................................
---------+---------+---------+---------+---------+---------+ 1025
PTG01_0110_F05.b : aaaacctggaaagcaacccggggaaaatgaaacccgaacccaacccctaaataaaacgct
LVRM1_0072_C10.b :
ITT01_0094_E10.b : gtcaaataaagactgtgaaagcgacccgggagaaatgagaagcaagacgaaagcgctgat
ILNT1_0076_F06.b : cccaccccggaaaaataaacgcaaaaccaacccctaataaaccccttttttgaaaacccc
SPLT1_0081_F06.b : cctgaaagcgaccggaaaaaatgaaagcaaaacaaaaccgcgattaaaacgcctttattg
OVR01_0017_B07.b : gggaaaagaaaggggtcaaattaaaaagaccctgggaaaaggcaaaaaccggggaaaaaa
OVR01_0100_E07.b :
BMWN1_0078_H06.b : accggaaaccaaccgggaaaaataaaacaaaacacaccccctaataaacccttttttaga
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : aaaaaaacccggaaacggacccggggaaaatgaaagacaaaaccaaccccgccataaaac
THY01_0081_G10.b :
20110601C-002778 : ............................................................
---------+---------+---------+---------+---------+---------+ 1025
PTG01_0110_F05.b : tttatgaaaaaccgaaaaagggggaaactgggtttccggacaatgaccccctgttgtttc
LVRM1_0072_C10.b :
ITT01_0094_E10.b : taaaacgcgttttatggaaaaaccagaaaaaggggggaaactggggcctcctcgacattg
ILNT1_0076_F06.b : aaaaagggggaactgggtttccctacaatgaaccctcttttgttttgtttaaatctctcc
SPLT1_0081_F06.b : aaaaccagaaaaagggtgaaaattggcttccgacagttgacttttggtggtttctgttaa
OVR01_0017_B07.b : attgaaaaaaaccaaaaaaaccaaaaaacccgcccttgaaataaaaaaaagccgccgttt
OVR01_0100_E07.b :
BMWN1_0078_H06.b : aaaacaaaaaggggggaaattggccttccggcacgggccccttgggtgttttgtttaaat
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : ccccttttttttggaaaccaaaaaagaggggggaacttggcttcaccttaaattggcccc
THY01_0081_G10.b :
20110601C-002778 : ............................................................
---------+---------+---------+---------+---------+---------+ 1025
PTG01_0110_F05.b : tttttaaaacccccaaaaagaaaaaattttggaaaaaaaaaaagcccttggtccattggg
LVRM1_0072_C10.b :
ITT01_0094_E10.b : gactctccgttggtcccggtttaaaatcccttcaaaagaaaaaagatttggaaaaaaaaa
ILNT1_0076_F06.b : caaaaaaaaaaagttttggaanagaagaacgggagaggaaggaggggcccgcgccactcc
SPLT1_0081_F06.b : aattcctcaaaggaaaaaatttttgtnnaaaaaaaaaaaaaanaaananaannnnnannn
OVR01_0017_B07.b : ttttatttggggaaaaaaaaaccccaaaaagaaaaaaaaagggggggggggggggaagaa
OVR01_0100_E07.b :
BMWN1_0078_H06.b : tcctcctccggaaagtttaaaaaaaaaaaaaaaaaaaataannngcngaccaccctcncc
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : ccttttgtttttgtttgaaaatctcttcaaaagaaaaaagttttanaaaaaaaaatacng
THY01_0081_G10.b :
20110601C-002778 : ............................................................
---------+---------+---------+---------+---------+---------+ 1025
PTG01_0110_F05.b : cgcccccttaaatcccggggggccaattacacccctttttgaaaaggcccaaggaggaat
LVRM1_0072_C10.b :
ITT01_0094_E10.b : aaaaggccagtgttcaaccgaggtcggccctctaatttcctggggccccattcgcccccc
ILNT1_0076_F06.b : tttggggggtgttctcccggatagaggtgtgttggaccccactgtgggcaaagctttagt
SPLT1_0081_F06.b : nnnnnnnnnnnnnccccaccccccctcttcctttttttgttttccaaatatattggttcc
OVR01_0017_B07.b : aacactttttgtgggggc
OVR01_0100_E07.b :
BMWN1_0078_H06.b : gcgcgcgccccccctttggggtttttctcccaccatttgtcgccccccaggggaagattt
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : gacaaaaaataaaaagagccttcccggccccccctccctagagaggttttccgccccccc
THY01_0081_G10.b :
20110601C-002778 : ............................................................
---------+---------+---------+---------+---------+---------+ 1025
PTG01_0110_F05.b : aaaaagggcgcgctttcacctcggggaaaaatctttgttttaaaacacttctggggaaaa
LVRM1_0072_C10.b :
ITT01_0094_E10.b : ttttgagaagggccctagagggttataaacgccgggcgcctttaccctgcggaaaaactt
ILNT1_0076_F06.b : aggggttgttaggggggaaccccgagaagaaagggggtttttttgtgggggg
SPLT1_0081_F06.b : cccccggagaaattttttttttttctttttttacacacaaaacacttttttttgtggggg
OVR01_0017_B07.b :
OVR01_0100_E07.b :
BMWN1_0078_H06.b : tttatgtgtttttaaaacacaataaaacccttgtgtgggggggggttttaaggagggggn
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : cactctttgtgtgttggcccccccaaccacaaacaaagtcttctcgccccgtgggggcgg
THY01_0081_G10.b :
20110601C-002778 : ............................................................
---------+---------+---------+---------+---------+---------+ 1025
PTG01_0110_F05.b : aaaacaacaaaaataa
LVRM1_0072_C10.b :
ITT01_0094_E10.b : tggtttttagaacatctttgggaata
ILNT1_0076_F06.b :
SPLT1_0081_F06.b : gggttttct
OVR01_0017_B07.b :
OVR01_0100_E07.b :
BMWN1_0078_H06.b : nnctccnccttcaaacaataaaataataaaaacatctc
OVRM1_0029_H04.b :
SPLT1_0020_H02.b : ctttttttttatattcgagcatatgctaaagctctt
THY01_0081_G10.b :