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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-002850

Length: 1,127

Sequence [FASTA format sequence]
GATTACGTCT ACCCAGGTGA CATTCACGAT TCCCTACTCC AGCTGTGGCA CCATCCAGCG
GGTGGACAAT GACACCATCA CCTATTCCAA CTCCCTCAGA GCGGCCGTCT CAAGTGGCAT
CATCAAGAGG AAGAAGGACC TCAACATGTA CGTCAGCTGC AGAATGCTCC AGAACACCTG
GGTTAACACC GTGTACATTG CTAACGACAC CCTTGAGGTC CAGAATGTGC AGTATGGCAA
CTTCGACGTC AACATTTCCT TTTTTACCTC CTCTTCGTTC TTATATCCCG TGAGGAGCAG
CCCATACTAC GTGGACCTGA ACCAGAATCT GTACCTTCAG GCTGAGATCC TCCATGCCAA
CGCCTCCCTG GCCTTATTTG TGGACACCTG TGTGGCATCA CCATATCCCA ATGACTTTAC
AACTTTGACT TACGACCTCA TCCGGAGCGG GTGTGTGAAG GACGAAACCT ACCAGTCCTA
CTCTCAGCCG TCGCCCCGCA TCGTCCGCTT CAAGTTCAGT TCCTTCCACT TCCTGAGCCG
CTTCCCCTCC GTGTACCTGC AGTGTAAGAT GGTCGTGTGC AGAGCGTTCG ACTCCTCCTC
CCGCTGCCGC AGAGGCTGCG TGGTGAGGTC CAAGAGGGAC GTGGGCTCCT ACCAGGAGAA
GGTGGATGTT GTCCTGGGAC CCATCCAGCT GCAGACCCTG CACGCTGAGA AGAGGAGCCT
GGACCAGCCG GCGGTTGACC TGGAGGAGAA GGCCAGCGCC CAGGGGAGCT ACGACGGTGC
TGCTATCTCT GCTGGGATCT TTCTTGTCGT GGTCTTGGCC GTGGCAGCCT TCACCCTGGG
GAGGCGCGGC CGTGCTGCCG ACGGCCAGCC TCTGATCTCT AAGACATGAT GCAGGGAAGG
GCGCACGGTG CTCAGAGGTC CCCGAGCTCC GGAGCCCCCG GAGGAAGGAA GAAACCAGGG
TCCAGAGCTG GGCACCCAGA GCACCCCACT CGCTTCCTCT GGCCCAGGTG CATGGTGGGG
GTTGGGTGAG AAGGACGGGA GTAGGCTTTC CCAGAAACAC CGCCTTGGTG CTGGGACAAA
ACGCCAGGGC AGCAGGTACC AGACCCTGAA TCCTGCCCGC AGCCATG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinDMBT1PREDICTED: deleted in malignant brain tumors 1 protein isoform 3 [Homo sapiens]. 3462e-95
Contig/Assembly ProteinDMBT1PREDICTED: deleted in malignant brain tumors 1 protein isoform 1 [Homo sapiens]. 3462e-95
Contig/Assembly ProteinDMBT1deleted in malignant brain tumors 1 protein isoform c precursor [Homo sapiens]. 3462e-95
Contig/Assembly ProteinDMBT1deleted in malignant brain tumors 1 protein isoform b precursor [Homo sapiens]. 3462e-95
Contig/Assembly ProteinDMBT1deleted in malignant brain tumors 1 protein isoform a precursor [Homo sapiens]. 3462e-95
Contig/Assembly ProteinDMBT1PREDICTED: deleted in malignant brain tumors 1 protein isoform 2 [Homo sapiens]. 3462e-95
Contig/Assembly ProteinCUZD1CUB and zona pellucida-like domain-containing protein 1 precursor [Homo sapiens]. 1741e-43
Contig/Assembly ProteinOIT3oncoprotein-induced transcript 3 protein precursor [Homo sapiens]. 77.82e-14
Contig/Assembly ProteinTECTAalpha-tectorin precursor [Homo sapiens]. 65.59e-11
Contig/Assembly ProteinZP2zona pellucida sperm-binding protein 2 preproprotein [Homo sapiens]. 64.71e-10


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinDmbt1deleted in malignant brain tumors 1 protein [Mus musculus]. 413e-115
Contig/Assembly ProteinCuzd1CUB and zona pellucida-like domain-containing protein 1 [Mus musculus]. 1655e-41
Contig/Assembly ProteinOit3oncoprotein-induced transcript 3 protein precursor [Mus musculus]. 828e-16
Contig/Assembly ProteinTectaalpha-tectorin precursor [Mus musculus]. 65.57e-11
Contig/Assembly ProteinZp2zona pellucida sperm-binding protein 2 precursor [Mus musculus]. 60.82e-09
Contig/Assembly ProteinUmoduromodulin precursor [Mus musculus]. 58.59e-09
Contig/Assembly ProteinTectbbeta-tectorin precursor [Mus musculus]. 54.32e-07
Contig/Assembly ProteinTgfbr3transforming growth factor beta receptor type 3 precursor [Mus musculus]. 53.92e-07


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC486922PREDICTED: similar to deleted in malignant brain tumors 1 isoform a precursor [Canis familiaris]. 372e-103
Contig/Assembly ProteinLOC486924PREDICTED: similar to CUB and zona pellucida-like domains 1 isoform 2 [Canis familiaris]. 1865e-47
Contig/Assembly ProteinLOC486924PREDICTED: similar to CUB and zona pellucida-like domains 1 isoform 1 [Canis familiaris]. 1865e-47
Contig/Assembly ProteinLOC486923PREDICTED: similar to deleted in malignant brain tumors 1 isoform a precursor [Canis familiaris]. 99.46e-21
Contig/Assembly ProteinLOC489044PREDICTED: similar to oncoprotein-induced transcript 3 [Canis familiaris]. 76.64e-14
Contig/Assembly ProteinLOC489357PREDICTED: similar to Alpha-tectorin precursor [Canis familiaris]. 64.72e-10
Contig/Assembly ProteinZP2zona pellucida sperm-binding protein 2 precursor [Canis lupus familiaris]. 61.61e-09
Contig/Assembly ProteinUMODuromodulin precursor [Canis lupus familiaris]. 55.87e-08
Contig/Assembly ProteinLOC490163PREDICTED: similar to TGF-beta receptor type III precursor (TGFR-3) (Transforming growth factor beta receptor III) (Betaglycan) [Canis familiaris]. 54.72e-07
Contig/Assembly ProteinLOC486891PREDICTED: similar to tectorin beta [Canis familiaris]. 53.93e-07


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinDMBT1PREDICTED: deleted in malignant brain tumors 1, partial [Bos taurus]. 409e-114
Contig/Assembly ProteinDMBT1PREDICTED: deleted in malignant brain tumors 1 [Bos taurus]. 409e-114
Contig/Assembly ProteinOIT3oncoprotein-induced transcript 3 protein precursor [Bos taurus]. 75.11e-13
Contig/Assembly ProteinZP2zona pellucida sperm-binding protein 2 precursor [Bos taurus]. 59.75e-09
Contig/Assembly ProteinUMODuromodulin precursor [Bos taurus]. 56.64e-08
Contig/Assembly ProteinZP4zona pellucida sperm-binding protein 4 precursor [Bos taurus]. 53.93e-07
Contig/Assembly ProteinTGFBR3PREDICTED: transforming growth factor, beta receptor III [Bos taurus]. 51.22e-06
Contig/Assembly ProteinTGFBR3PREDICTED: transforming growth factor, beta receptor III [Bos taurus]. 51.22e-06


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinDMBT1deleted in malignant brain tumors 1 protein [Sus scrofa]. 537e-153
Contig/Assembly ProteinLOC100519221PREDICTED: hypothetical protein LOC100519221 [Sus scrofa]. 1256e-29
Contig/Assembly ProteinLOC100513952PREDICTED: oncoprotein-induced transcript 3 protein-like [Sus scrofa]. 795e-15
Contig/Assembly ProteinLOC100523684PREDICTED: alpha-tectorin-like [Sus scrofa]. 64.79e-11
Contig/Assembly ProteinZP2zona pellucida sperm-binding protein 2 precursor [Sus scrofa]. 56.62e-08
Contig/Assembly ProteinTECTBPREDICTED: beta-tectorin [Sus scrofa]. 53.92e-07
Contig/Assembly ProteinZP4zona pellucida sperm-binding protein 4 [Sus scrofa]. 53.52e-07
Contig/Assembly ProteinTGFBR3transforming growth factor beta receptor type 3 precursor [Sus scrofa]. 50.81e-06


Assembly Members: 5      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ILNT10020G03ILNT1_0020_G03.bHX228277 
TCH010054B06TCH01_0054_B06.bBW975889 
TCH010062H01TCH01_0062_H01.bCJ026885 AK238206
TCH010077H07TCH01_0077_H07.bCJ028029 
TCH010080C02TCH01_0080_C02.bCJ028203 AK351034

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
583A300.600WSAGA/R
G200.400AGG/R
805C200.500WSCTC/L
T200.500CTT/L


Alignment:      TOP

20110601C-002850 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
TCH01_0062_H01.b : nnnccgcattgtactaanacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0077_H07.b :
TCH01_0080_C02.b :
TCH01_0054_B06.b :
ILNT1_0020_G03.b :
20110601C-002850 : .......................GATTACGTCTACCCAGGTGACATTCACGATTCCCTAC
---------+---------+---------+---------+---------+---------+ 37
TCH01_0062_H01.b : xxxxxxxxxxxxxxxxxxxxxxxGATTACGTCTACCCAGGTGACATTCACGATTCCCTAC
TCH01_0077_H07.b :
TCH01_0080_C02.b :
TCH01_0054_B06.b :
ILNT1_0020_G03.b :
20110601C-002850 : TCCAGCTGTGGCACCATCCAGCGGGTGGACAATGACACCATCACCTATTCCAACTCCCTC
---------+---------+---------+---------+---------+---------+ 97
TCH01_0062_H01.b : TCCAGCTGTGGCACCATCCAGCGGGTGGACAATGACACCATCACCTATTCCAACTCCCTC
TCH01_0077_H07.b :
TCH01_0080_C02.b :
TCH01_0054_B06.b :
ILNT1_0020_G03.b :
20110601C-002850 : AGAGCGGCCGTCTCAAGTGGCATCATCAAGAGGAAGAAGGACCTCAACATGTACGTCAGC
---------+---------+---------+---------+---------+---------+ 157
TCH01_0062_H01.b : AGAGCGGCCGTCTCAAGTGGCATCATCAAGAGGAAGAAGGACCTCAACATGTACGTCAGC
TCH01_0077_H07.b : nnnttgctagtgacttgacxxxxxxxxxxxxxxxxxxxxxx
TCH01_0080_C02.b : nnnnggctaggactatnacxxxxxxxxxxxxxxxx
TCH01_0054_B06.b :
ILNT1_0020_G03.b :
20110601C-002850 : TGCAGAATGCTCCAGAACACCTGGGTTAACACCGTGTACATTGCTAACGACACCCTTGAG
---------+---------+---------+---------+---------+---------+ 217
TCH01_0062_H01.b : TGCAGAATGCTCCAGAACACCTGGGTTAACACCGTGTACATTGCTAACGACACCCTTGAG
TCH01_0077_H07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtggggTTGCTAACGACACCCTTGAG
TCH01_0080_C02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGCTAACGACACCCTTGAG
TCH01_0054_B06.b : nnntttgcttggactatnacagtttgtcxxxxxx
ILNT1_0020_G03.b : nnnaagagagt
20110601C-002850 : GTCCAGAATGTGCAGTATGGCAACTTCGACGTCAACATTTCCTTTTTTACCTCCTCTTCG
---------+---------+---------+---------+---------+---------+ 277
TCH01_0062_H01.b : GTCCAGAATGTGCAGTATGGCAACTTCGACGTCAACATTTCCTTTTTTACCTCCTCTTCG
TCH01_0077_H07.b : GTCCAGAATGTGCAGTATGGCAACTTCGACGTCAACATTTCCTTTTTTACCTCCTCTTCG
TCH01_0080_C02.b : GTCCAGAATGTGCAGTATGGCAACTTCGACGTCAACATTTCCTTTTTTACCTCCTCTTCG
TCH01_0054_B06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTTACGTCCTCTTCG
ILNT1_0020_G03.b : agaggccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACCTCCTCTTCG
20110601C-002850 : TTCTTATATCCCGTGAGGAGCAGCCCATACTACGTGGACCTGAACCAGAATCTGTACCTT
---------+---------+---------+---------+---------+---------+ 337
TCH01_0062_H01.b : TTCTTATATCCCGTGAGGAGCAGCCCATACTACGTGGACCTGAACCAGAATCTGTACCTT
TCH01_0077_H07.b : TTCTTATATCCCGTGAGGAGCAGCCCATACTACGTGGACCTGAACCAGAATCTGTACCTT
TCH01_0080_C02.b : TTCTTATATCCCGTGAGGAGCAGCCCATACTACGTGGACCTGAACCAGAATCTGTACCTT
TCH01_0054_B06.b : TTCTTATATCCCGTGAGGAGCAGCCCATACTACGTGGACCTGAACCAGAATCTGTACCTT
ILNT1_0020_G03.b : TTCTTATATCCCGTGAGGAGCAGCCCATACTACGTGGACCTGAACCAGAATCTGTACCTT
20110601C-002850 : CAGGCTGAGATCCTCCATGCCAACGCCTCCCTGGCCTTATTTGTGGACACCTGTGTGGCA
---------+---------+---------+---------+---------+---------+ 397
TCH01_0062_H01.b : CAGGCTGAGATCCTCCATGCCAACGCCTCCCTGGCCTTATTTGTGGACACCTGTGTGGCA
TCH01_0077_H07.b : CAGGCTGAGATCCTCCATGCCAACGCCTCCCTGGCCTTATTTGTGGACACCTGTGTGGCA
TCH01_0080_C02.b : CAGGCTGAGATCCTCCATGCCAACGCCTCCCTGGCCTTATTTGTGGACACCTGTGTGGCA
TCH01_0054_B06.b : CAGGCTGAGCTCCTCCATGCCAACGCCTCCCTGGCCTTATTTGTGGACACCTGTGTGGCA
ILNT1_0020_G03.b : CAGGCTGAGATCCTCCATGCCAACGCCTCCCTGGCCTTATTTGTGGACACCTGTGTGGCA
20110601C-002850 : TCACCATATCCCAATGACTTTACAACTTTGACTTACGACCTCATCCGGAGCGGGTGTGTG
---------+---------+---------+---------+---------+---------+ 457
TCH01_0062_H01.b : TCACCATATCCCAATGACTTTACAACTTTGACTTACGACCTCATCCGGAGCGGGTGTGTG
TCH01_0077_H07.b : TCACCATATCCCAATGACTTTACAACTTTGACTTACGACCTCATCCGGAGCGGGTGTGTG
TCH01_0080_C02.b : TCACCATATCCCAATGACTTTACAACTTTGACTTACGACCTCATCCGGAGCGGGTGTGTG
TCH01_0054_B06.b : TCGCCATATCCCAATGACTTTACAACTTTGACTTACGACCTCATCCGGAGCGGGTGTGTG
ILNT1_0020_G03.b : TCACCATATCCCAATGACTTTACAACTTTGACTTACGACCTCATCCGGAGCGGGTGTGTG
20110601C-002850 : AAGGACGAAACCTACCAGTCCTACTCTCAGCCGTCGCCCCGCATCGTCCGCTTCAAGTTC
---------+---------+---------+---------+---------+---------+ 517
TCH01_0062_H01.b : AAGGACGAAACCTACCAGTCCTACTCTCAGCCGTCGCCCCGCATCGTCCGCTTCAAGTTC
TCH01_0077_H07.b : AAGGACGAAACCTACCAGTCCTACTCTCAGCCGTCGCCCCGCATCGTCCGCTTCAAGTTC
TCH01_0080_C02.b : AAGGACGAAACCTACCAGTCCTACTCTCAGCCGTCGCCCCGCATCGTCCGCTTCAAGTTC
TCH01_0054_B06.b : AAGGACGAAACCTACCAGTCCTACTCTCAGCCGTCGCCCCGCATCGTCCGCTTCAAGTTC
ILNT1_0020_G03.b : AAGGACGAAACCTACCAGTCCTACTCTCAGCCGTCGCCCCGCATCGTCCGCTTCAAGTTC
20110601C-002850 : AGTTCCTTCCACTTCCTGAGCCGCTTCCCCTCCGTGTACCTGCAGTGTAAGATGGTCGTG
---------+---------+---------+---------+---------+---------+ 577
TCH01_0062_H01.b : AGTTCCTTCCACTTCCTGAGCCGCTTCCCCTCCGTGTACCTGCAGTGTAAGATGGTCGTG
TCH01_0077_H07.b : AGTTCCTTCCACTTCCTGAGCCGCTTCCCCTCCGTGTACCTGCAGTGTAAGATGGTCGTG
TCH01_0080_C02.b : AGTTCCTTCCACTTCCTGAGCCGCTTCCCCTCCGTGTACCTGCAGTGTAAGATGGTCGTG
TCH01_0054_B06.b : AGTTCCTTCCACTTCCTGAGCCGCTTCCCCTCCGTGTACCTGCAGTGTAAGATGGTCGTG
ILNT1_0020_G03.b : AGTTCCTTCCACTTCCTGAGCCGCTTCCCCTCCGTGTACCTGCAGTGTAAGATGGTCGTG
20110601C-002850 : TGCAGAGCGTTCGACTCCTCCTCCCGCTGCCGCAGAGGCTGCGTGGTGAGGTCCAAGAGG
---------+---------+---------+---------+---------+---------+ 637
TCH01_0062_H01.b : TGCAGAGCGTTCGACTCCTCCTCCCGCTGCCGCAGAGGCTGCGTGGTGAGGTCCAAGAGG
TCH01_0077_H07.b : TGCAGAGCGTTCGACTCCTCCTCCCGCTGCCGCAGAGGCTGCGTGGTGAGGTCCAAGAGG
TCH01_0080_C02.b : TGCAGAGCGTTCGACTCCTCCTCCCGCTGCCGCAGAGGCTGCGTGGTGAGGTCCAAGAGG
TCH01_0054_B06.b : TGCAGGGCGTTCGACTCCTCCTCCCGCTGCCGCAGAGGCTGCGTGGTGAGGTCCAAGAGG
ILNT1_0020_G03.b : TGCAGGGCGTTCGACTCCTCCTCCCGCTGCCGCAGAGGCTGCGTGGTGAGGTCCAAGAGG
20110601C-002850 : GACGTGGGCTCCTACCAGGAGAAGGTGGATGTTGTCCTGGGACCCATCCAGCTGCAGACC
---------+---------+---------+---------+---------+---------+ 697
TCH01_0062_H01.b : GACGTGGGCTCCTACCAGGAGAAGGTGGATGTTGTCCTGNGACCCATCCAGCTGCAGACC
TCH01_0077_H07.b : GACGTGGGCTCCTACCAGGAGAAGGTGGATGTTGTCCTGGGACCCATCCAGCTGCAGACC
TCH01_0080_C02.b : GACGTGGGCTCCTACCAGGAGAAGGTGGATGTTGTCCTGGGACCCATCCAGCTGCAGACC
TCH01_0054_B06.b : GACGTGGGCTCCTACCAGGAGAAGGTGGATGTTGTCCTGGGACCCATCCAGCTGCAGACC
ILNT1_0020_G03.b : GACGTGGGCTCCTACCAGGAGAAGGTGGATGTCGTCCTGGGACCCATCCAGCTGCAGACC
20110601C-002850 : CTGCACGCTGAGAAGAGGAGCCTGGACCAGCCGGCGGTTGACCTGGAGGAGAAGGCCAGC
---------+---------+---------+---------+---------+---------+ 757
TCH01_0062_H01.b : CTGCACGCTGAGAAGAGGAGCCTGGACCAGCCGGCGGTTGACCTGGAGGAGAAGGCCAGC
TCH01_0077_H07.b : CTGCACGCTGAGAAGAGGAGCCTGGACCAGCCGGCGGTTGACCTGGAGGAGAAGGCCAGC
TCH01_0080_C02.b : CTGCACGCTGAGAAGAGGAGCCTGGACCAGCCGGCGGTTGACCTGGAGGAGAAGGCCAGC
TCH01_0054_B06.b : CTGCACGCTGAGAAGAGGAGCCTGGACCAGCCGGCGGTTGACCTGGAGGAGAAGGCCAGC
ILNT1_0020_G03.b : CTGCACGCTGAGAAGAGGAGCCTGGACCAGCCAGCGGTTGACCTGGAGGAGAAGGCCAGC
20110601C-002850 : GCCCAGGGGAGCTACGACGGTGCTGCTATCTCTGCTGGGATCTTTCTTGTCGTGGTCTTG
---------+---------+---------+---------+---------+---------+ 817
TCH01_0062_H01.b : GCCCAGGGGAGCTACGACGGTGCTGCTATCTCTGCTGGGATCTTTCTTGTCGTGGTCTTG
TCH01_0077_H07.b : GCCCAGGGGAGCTACGACGGTGCTGCTATCTCTGCTGGGATCTTTCTTGTCGTGGTCTTG
TCH01_0080_C02.b : GCCCAGGGGAGCTACGACGGTGCTGCTATCTCTGCTGGGATCTTTCTTGTCGTGGTCTTG
TCH01_0054_B06.b : GCCCAGGGGAGCTACGACGGTGCTGCTATCTCTGCTGGGATCTTTCTCGTCGTGGTCTTG
ILNT1_0020_G03.b : ACCCAGGGGAGCTACGACGGTGCTGCTATCTCTGCTGGGATCTTTCTCGTCGTGGTCTTG
20110601C-002850 : GCCGTGGCAGCCTTCACCCTGGG*GAGGCGCGGCCGTGCTGCCGACGGCCAGCCTCTGAT
---------+---------+---------+---------+---------+---------+ 876
TCH01_0062_H01.b : GGCGTGGCAGC*TTCACCCTGGGGGAGGCGCGGCCGTGCTGCCGACGGCCCAGCTCCGAT
TCH01_0077_H07.b : GCCGTGGCAGCCTTCACCCTGGNGGAGGCGCGGCCGTGCTGCCGACGGCCAGCCTCTGAT
TCH01_0080_C02.b : GCCGTGGCAGCCTTCACCCTGGG*GAGGCGCGGCCGTGCTGCCGACGGCCAGCCTCTGAT
TCH01_0054_B06.b : GCCGTGGCAGCCTTCACCCTGGG*GAGGCGCGGCCGTGCTGCCGACGGCCAGCCTCTGAT
ILNT1_0020_G03.b : GCCGTGGCAGCCTTCACCCTGGG*GAGGCGCGGCCGTGCTGCCGACGGCCAGCCTCTGAT
20110601C-002850 : CTCTAAGACATGATGCAGGGAAGGGCGCACGGTGCTCAGAGGTCCCCGAGCTCCGGAGCC
---------+---------+---------+---------+---------+---------+ 936
TCH01_0062_H01.b : CTCTA*GACATGATGCAGGAAAGGGCGCACGGTGCTCAGAGGTCCCgagctccgagcccc
TCH01_0077_H07.b : CTCTAAGACATGATGCAGGGAAGGGCGCACGGTGCTCAGAGGTCCCCGAGCTCCGGAGCC
TCH01_0080_C02.b : CTCTAAGACATGATGCAGGGAAGGGCGCACGGTGCTCAGAGGTCCCCGAGCTCCGGAGCC
TCH01_0054_B06.b : CTCTAAGACATGATGCANGGAAGGGCGCACGGTGCTCAGAGGTCCCCGAGCTCCGGAGCC
ILNT1_0020_G03.b : CTCTAAGACATGATGCAGGGAAGGGCGCACGGTGCTCAGAGGTCCCCGAGCTCCGGAGCC
20110601C-002850 : CCCGGAGGAAGGAAGAAACCAGGGTCCAGAGCTGGGCACCCAGAGCACCCCACTCGCTTC
---------+---------+---------+---------+---------+---------+ 996
TCH01_0062_H01.b : cggaggaaggaagaacccagggtcagaactgggcaccagagacccccatccctttctctg
TCH01_0077_H07.b : CCCGGGGGAAAGAAGAAACCAGGGTCCAGAGCTGGGCACCCAGAGCACCCCACTCGCTTC
TCH01_0080_C02.b : CCCGGAGGAAGGAAGAAACCAGGGTCCAGAGCTGGGCACCCAGAGCACCCCACTCGCTTC
TCH01_0054_B06.b : CCCGGAGGGAAGGAAGAACCAGGGTCCAGAGCTGGGCACCCAGAGCACCCCACTCGCTTC
ILNT1_0020_G03.b : CCCGGAGGAAGGAAGAAACCAGGGTCCAGAGCTGGGCACCCAGAGCACCCCACTCGCTTC
20110601C-002850 : CTCTGGCCCAGGTGCATGGTGGGGGTTGGGTGAGAAGGACGGGAGTAGGCTTTCCCAGAA
---------+---------+---------+---------+---------+---------+ 1056
TCH01_0062_H01.b : gcccgtgcaggttggggttgggttaaaagaacggaatatggtttccccaaaaacccccct
TCH01_0077_H07.b : CTCTGGCCCANGTGCATGGTGGGGGGTGGGTGAGAAGGACGGGAGTAGGTTTTCCCAGAA
TCH01_0080_C02.b : CTCTGGCCCANGTGCATGGTGGGGG*TGGGTGAGAAAGACGGGAGTAGGCTTTTCCAGAA
TCH01_0054_B06.b : CTCTGGCCCANGTGCATGGTGGGGGTGGGgtgaaaagacnggaataggttttcccagaac
ILNT1_0020_G03.b : CTCTGGCCCAGGTGCATGGTGGGGGGgggtggnnn
20110601C-002850 : ACACCGCCTTGGTGCTGGGACAAAACGCCAGGGCAGCAGGTACCAGACCCTGAATCCTGC
---------+---------+---------+---------+---------+---------+ 1116
TCH01_0062_H01.b : gggtgctggaaaaaaaccccggccaccggttaccaaaccttaa
TCH01_0077_H07.b : ACACCGCCTTGGTGCTGGGACAAAACGCCAGGGCAGCAGGTACCAGACCCTGAATCCTGC
TCH01_0080_C02.b : ACACCGCCTTGGTGCTGGGgacaaacgcaggccagcaagtacaagacctgaaatcctgcc
TCH01_0054_B06.b : accgccttggtgctgggacaaaagccagggcagcaggtaccaaaacctgaaaatctgcct
ILNT1_0020_G03.b :
20110601C-002850 : CCGCAGCCATG.................................................
---------+---------+---------+---------+---------+---------+ 1127
TCH01_0062_H01.b :
TCH01_0077_H07.b : CCGCAGCCATGagccacactagaggcagcagcactttttctggtagaaactactttctga
TCH01_0080_C02.b : tgccgccctgagccaacttagagccgcagcactttcctggtaagaactactttccgatct
TCH01_0054_B06.b : gcagccctgaggcccactagaaggcgccgcccttttcgggttagaacttactttcctgat
ILNT1_0020_G03.b :
20110601C-002850 : ............................................................
---------+---------+---------+---------+---------+---------+ 1127
TCH01_0062_H01.b :
TCH01_0077_H07.b : tcttttatgggctccggggcctgtcctgtatatctacccttggtttatacagggacaact
TCH01_0080_C02.b : tttaggggcttccggggccgccgtgaatactaacccttgcttatacaggacagctgaaaa
TCH01_0054_B06.b : ctttttggggcttcccggggcctggccggggaaaacttaaaccttggcctaataacggga
ILNT1_0020_G03.b :
20110601C-002850 : ............................................................
---------+---------+---------+---------+---------+---------+ 1127
TCH01_0062_H01.b :
TCH01_0077_H07.b : ggataaagaaatttttgaaagccaaaaaaaaaaaaaaaaaaagggcaatgtggcctcaac
TCH01_0080_C02.b : agacttttttgaagcaaaaaaaaaaaaaaggccctgggtccaacttcaggtccggcgctc
TCH01_0054_B06.b : cccggcttaaaaaaggaacctttttttgaaagccccccccnnnnacnccnaaaaaaanaa
ILNT1_0020_G03.b :
20110601C-002850 : ............................................................
---------+---------+---------+---------+---------+---------+ 1127
TCH01_0062_H01.b :
TCH01_0077_H07.b : tgagggtccggccccccttaatttccctcggggggccagcttatcgttacaacttttt
TCH01_0080_C02.b : taagaatctcgaggggccagctttaggtacccgtttttggaaaagggtccctaaggagcg
TCH01_0054_B06.b : aaaaaaaaggccccct
ILNT1_0020_G03.b :
20110601C-002850 : ............................................................
---------+---------+---------+---------+---------+---------+ 1127
TCH01_0062_H01.b :
TCH01_0077_H07.b :
TCH01_0080_C02.b : atataactggctgccgtgttttaaagcgga
TCH01_0054_B06.b :
ILNT1_0020_G03.b :