Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-002896

Sequence: [FASTA format sequence] TTGATCTTTT CTTTGCGCCC AAGTGAGCAG TAACCAACAT GTCAGGGTGG GAGTCTTATT ACAAAAACCA GGGCGATGAA GAAGAAGAAG AGGAGGAGGG CCGTGAAACG GGTGAAGATT ATAGATGTTC AGGAAGAGAC AGTTTGATTT TTTTGGTTGA TGCTTCTAGA GCCATGTTTG AATCTCAGGA TGAAGATGAA TTGACTCCTT TTGACATGAG CATCCAGTGT ATCCAGAGCG TGTACACCAA TAAGATCATA AGCAGTGATC GCGATCTCTT GGCAGTGGTG TTCTATGGTA CCAAGAAGGA CAAAAACTCA GTGAATTTCA AAAATATCTA CGTCCTACAG GAATTGGATA GTCCAGGTGC TAAACGAGTG CAAGAGCTGG ATCGGTTTAA GGGGCAGGAG GGGACGAAGT ATTTCCAAGA CCTGCTTGGC CATGGATCTG ACTACTCACT AAGTGAGGTG CTGTGGGTCT GCGCCAACCT CTTCAGTGAC GTCCAGGTCA AGATGAGCCA TAAGAGGATC ATGCTTTTCA CCAATGACGA CGACCCCCAC GGCAATGACA GCGCCAAAGC CAGCCGGGCA AGGACCAAAG CTGGGGACCT CCGTGACACA GGTATCTTCC TGGACTTGAT GCACCTGAAG AAGCCTGGGG GCTTTGACAT ATCCTTGTTC TACAGAGATA TCATCAGTGT GGCAGAGGAT GAGGACATAG GGGTTCACTT TGAGGAGTCG CACAAGCTCG AGGACCTGTT GAGGAAGGTC CGTGCCAAGG AGACCAGGAA GCGTGTGCTC CACAGGTTGA AACTTAAGCT CAGCAAAGAT GTAGCGCTCA CTGTCGGCAT TTACAATTTG GTCCAGAAGG CTTACAAACC TTTCCCGGTG AGGCTTTATC GGGGAACAAA TGACCCGGTG AAAACAAGAC CCGGAAGTTT AATGTAAACA CGGGCA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
XRCC6 X-ray repair cross-complementing protein 6 [Homo sapiens]. 462 e-130 O

		Locus	Definition	Score	E value	FL
		XRCC6	X-ray repair cross-complementing protein 6 [Homo sapiens].	462	e-130	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Xrcc6 X-ray repair cross-complementing protein 6 [Mus musculus]. 466 e-131 O

		Locus	Definition	Score	E value	FL
		Xrcc6	X-ray repair cross-complementing protein 6 [Mus musculus].	466	e-131	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC474485 PREDICTED: similar to ATP-dependent DNA helicase II, 70 kDa subunit (Lupus Ku autoantigen protein p70) (Ku70) (70 kDa subunit of Ku antigen) (Thyroid-lupus autoantigen) (TLAA) (CTC box binding factor 75 kDa subunit) (CTCBF) (CTC75) isoform 1 [Canis familiaris]. 469 e-133 O

LOC474485 PREDICTED: similar to thyroid autoantigen isoform 2 [Canis familiaris]. 422 e-118 O

		Locus	Definition	Score	E value	FL
		LOC474485	PREDICTED: similar to ATP-dependent DNA helicase II, 70 kDa subunit (Lupus Ku autoantigen protein p70) (Ku70) (70 kDa subunit of Ku antigen) (Thyroid-lupus autoantigen) (TLAA) (CTC box binding factor 75 kDa subunit) (CTCBF) (CTC75) isoform 1 [Canis familiaris].	469	e-133	O
		LOC474485	PREDICTED: similar to thyroid autoantigen isoform 2 [Canis familiaris].	422	e-118	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
XRCC6 X-ray repair cross-complementing protein 6 [Bos taurus]. 475 e-135 O

XRCC6 PREDICTED: X-ray repair complementing defective repair in Chinese hamster cells 6 [Bos taurus]. 475 e-135 O

		Locus	Definition	Score	E value	FL
		XRCC6	X-ray repair cross-complementing protein 6 [Bos taurus].	475	e-135	O
		XRCC6	PREDICTED: X-ray repair complementing defective repair in Chinese hamster cells 6 [Bos taurus].	475	e-135	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
XRCC6 X-ray repair cross-complementing protein 6 [Sus scrofa]. 521 e-148 O

		Locus	Definition	Score	E value	FL
		XRCC6	X-ray repair cross-complementing protein 6 [Sus scrofa].	521	e-148	O

Assembly Members: 8 TOP

Library Plate Loc. Read Name Accession Full Seq.

CLNT1 0069 F06 CLNT1_0069_F06.b FS662529
KDN01 0038 D05 KDN01_0038_D05.b
KDN01 0100 B04 KDN01_0100_B04.b FS678367
PTG01 0041 G03 PTG01_0041_G03.b FS708053
PTG01 0043 C05 PTG01_0043_C05.b FS708191
THY01 0020 C04 THY01_0020_C04.b BP162159
THY01 0052 H11 THY01_0052_H11.b BP169216 AK238976
UTR01 0012 A10 UTR01_0012_A10.b BP169762

SNPs: 2 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
566 C 2 0 0.286 W S AAC/N
T 5 0 0.714 AAT/N
590 A 4 0 0.571 W S GCA/A
C 3 0 0.429 GCC/A

Alignment: TOP

20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
UTR01_0012_A10.b :  tggggcggacttataxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0052_H11.b : atttggggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0069_F06.b :                   ggtccgtctgctgtcgxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0100_B04.b :                                                             
THY01_0020_C04.b :               xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PTG01_0041_G03.b :                                     ncggtttttttngggcgtaacggc
KDN01_0038_D05.b :                                                             
PTG01_0043_C05.b :                                                             


20110601C-002896 : ..........................TTGATCTTTTCTTTGCGCCCAAGTGAGCAGTAAC
                   ---------+---------+---------+---------+---------+---------+ 34
UTR01_0012_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxTTGATCTTTTCTTTGCGCCCAAGTGAGCAGTAAC
THY01_0052_H11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxTTGATCTTTTCTTTGCGCCCAAGTGAGCAGTAAC
CLNT1_0069_F06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxGATCTTTTCTTTGCGCCCAAGTGAGCAGTAAC
KDN01_0100_B04.b :      nnnnggctgaggtggctctggattATCTTTTCTTTGCCCC**AGTGAGCAGTA*C
THY01_0020_C04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxttTTTTCTTTGCGCCCAAGTGAGCAGTAAC
PTG01_0041_G03.b : tgnaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCGCCCAAGTGAGCAGTAAC
KDN01_0038_D05.b :                      gctctggattgtcttttcttgcgcccAGTGAGCAGTA*C
PTG01_0043_C05.b :                                                             


20110601C-002896 : CAACATGTCAGGGTGGGAGTCTTATTACAAAAACCAGGGCGATGAAGAAGAAGAAGAGGA
                   ---------+---------+---------+---------+---------+---------+ 94
UTR01_0012_A10.b : CAACATGTCAGGGTGGGAGTCTTATTACAAAAACCAGGGCGATGAAGAAGAAGAAGAGGA
THY01_0052_H11.b : CAACATGTCAGGGTGGGAGTCTTATTACAAAAACCAGGGCGATGAAGAAGAAGAAGAGGA
CLNT1_0069_F06.b : CAACATGTCAGGGTGGGAGTCTTATTACAAAAACCAGGGCGATGAAGAAGAAGAAGAGGA
KDN01_0100_B04.b : CAACATGTCAGGGTGGGAGTCTTATTACAAAAACCAGGGCGATGAAGAAGAAGAAGAGGA
THY01_0020_C04.b : CAACATGTCAGGGTGGGAGTCTTATTACAAAAACCAGGGCGATGAAGAAGAAGAAGAGGA
PTG01_0041_G03.b : CAACATGTCAGGGTGGGAGTCTTATTACAAAAACCAGGGCGATGAAGAAGAAGAAGAGGA
KDN01_0038_D05.b : CAACATGTCAGGGTGCCATACTTGTT*CAAAAACCAGGGCGATGAAGAAGAAGAAGACTT
PTG01_0043_C05.b :                                             nnnnnnnnnnnnnnnn


20110601C-002896 : GGAGGGCCGTGAAACGGGTGAAGATTATAGATGTTCAGGAAGAGACAGTTTGATTTTTTT
                   ---------+---------+---------+---------+---------+---------+ 154
UTR01_0012_A10.b : GGAGGGCCGTGAAACGGGTGAAGATTATAGATGTTCAGGAAGAGACAGTTTGATTTTTTT
THY01_0052_H11.b : GGAGGGCCGTGAAACGGGTGAAGATTATAGATGTTCAGGAAGAGACAGTTTGATTTTTTT
CLNT1_0069_F06.b : GGAGGGCCGTGAAACGGGTGAAGATTATAGATGTTCAGGAAGAGATAGTTTGATTTTTTT
KDN01_0100_B04.b : GGAGGGCCGTGAAACGGGTGAAGATTATAGATGTTCAGGAAGAGACAGTTTGATTTTTTT
THY01_0020_C04.b : GGAGGGCCGTGAAACGGGTGAAGATTATAGATGTTCAGGAAGAGACAGTTTGATTTTTTT
PTG01_0041_G03.b : GGAGGGCCGGGAAACGGGTGAAGATTATAGATGTTCAGGAAGAGACAGTTTGATTTTTTT
KDN01_0038_D05.b : TGAGGGCCGTGAAACGGGTGAAGATTATAGATGTTCAGGAAGAGACAGTTTGATTTTTTT
PTG01_0043_C05.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxttgatctt


20110601C-002896 : GGTTGATGCTTCTAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCTTTTGA
                   ---------+---------+---------+---------+---------+---------+ 214
UTR01_0012_A10.b : GGTTGATGCTTCTAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCTTTTGA
THY01_0052_H11.b : GGTTGATGCTTCTAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCTTTTGA
CLNT1_0069_F06.b : GGTTGATGCTTCTAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCTTTTGA
KDN01_0100_B04.b : GGTTGATGCTTCTAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCTTTTGA
THY01_0020_C04.b : GGTTGATGCTTCTAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCTTTTGA
PTG01_0041_G03.b : GGTTGATGCTTCTAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCTTTTGA
KDN01_0038_D05.b : GGTTGATGCTTCTAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCGTTTGA
PTG01_0043_C05.b : ttctttgcgcccaAGAGCCATGTTTGAATCTCAGGATGAAGATGAATTGACTCCTTTTGA


20110601C-002896 : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA
                   ---------+---------+---------+---------+---------+---------+ 274
UTR01_0012_A10.b : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA
THY01_0052_H11.b : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA
CLNT1_0069_F06.b : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA
KDN01_0100_B04.b : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA
THY01_0020_C04.b : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA
PTG01_0041_G03.b : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA
KDN01_0038_D05.b : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA
PTG01_0043_C05.b : CATGAGCATCCAGTGTATCCAGAGCGTGTACACCAATAAGATCATAAGCAGTGATCGCGA


20110601C-002896 : TCTCTTGGCAGTGGTGTTCTATGGTACCAAGAAGGACAAAAACTCAGTGAATTTCAAAAA
                   ---------+---------+---------+---------+---------+---------+ 334
UTR01_0012_A10.b : TCTCTTGGCAGTGGTGTTCTATGGTACCAAGAAGGACAAAAACTCAGTGAATTTCAAAAA
THY01_0052_H11.b : TCTCTTGGCAGTGGTGTTCTGTGGTACCAAGAAGGACAAAAACTCAGTGAATTTCAAAAA
CLNT1_0069_F06.b : TCTCTTGGCAGTGGTGTTCTATGGTACCAAGAAGGACAAAAACTCAGTGAATTTCAAAAA
KDN01_0100_B04.b : TCTCTTGGCAGTGGTGTTCTATGGTACCAAGAAGGACAAAAACTCAGTGAATTTCAAAAA
THY01_0020_C04.b : TCTCTTGGCAGTGGTGTTCTATGGTACCAAGAAGGACAAAAACTCAGTGAATTTCAAAAA
PTG01_0041_G03.b : TCTCTTGGCAGTGGTGTTCTATGGTACCAAGAAGGACAAAAACTCAGTGAATTTCAAAAA
KDN01_0038_D05.b : TCTCTTGGCAGTGGTGTTCTATGGTACCAAGAAGGACAAAAACTCAGTGAATTTCAAAAA
PTG01_0043_C05.b : TCTCTTGGCAGTGGTGGTCTATGGGACCCAGAAGGACCAAAACTCCGTGAATTTCCAAAA


20110601C-002896 : TATCTACGTCCTACAGGAATTGGATAGTCCAGGTGCTAAACGAGTGCAAGAGCTGGATCG
                   ---------+---------+---------+---------+---------+---------+ 394
UTR01_0012_A10.b : TATCTACGTCCTACAGGAATTGGATAGTCCAGGTGCTAAACGAGTGCAAGAGCTGGATCG
THY01_0052_H11.b : TATCTACGTCCTACAGGAATTGGATAGTCCAGGTGCTAAACGAGTGCAAGAGCTGGATCG
CLNT1_0069_F06.b : TATCTACGTCCTACAGGAATTGGATAGTCCAGGTGCTAAACGAGTGCAAGAGCTGGATCG
KDN01_0100_B04.b : TATCTACGTCCTACAGGAATTGGATAGTCCAGGTGCTAAACGAGTGCAAGAGCTGGATCG
THY01_0020_C04.b : TATCTACGTCCTACAGGAATTGGATAGTCCAGGTGCTAAACGAGTGCAAGAGCTGGATCG
PTG01_0041_G03.b : TATCTACGTCCTACAGGAATTGGATAGTCCAGGTGCTAAACGAGTGCAAGAGCTGGATCG
KDN01_0038_D05.b : TATCTACGTCCTACAGGAATTGGATAGTCCAGGTGCTAAACGAGTGCAAGAGCTGGATCG
PTG01_0043_C05.b : TATCTACCTCCTACCGGAATTGGATAGTCCAGGTGCTAAACCAATGCCAGAACTGGATCC


20110601C-002896 : GTTTAAGGGGCAGGAGGGGACGAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA
                   ---------+---------+---------+---------+---------+---------+ 454
UTR01_0012_A10.b : GTTTAAGGGGCAGGAGGGGACGAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA
THY01_0052_H11.b : GTTTAAGGGGCAGGAGGGGACGAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA
CLNT1_0069_F06.b : GTTTAAGGGGCAGGAGGGGACGAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA
KDN01_0100_B04.b : GTTTAAGGGGCAGGAGGGGACGAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA
THY01_0020_C04.b : GTTTAAGGGGCAGGAGGGGACGAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA
PTG01_0041_G03.b : GTTTAAGGGGCAGGAGGGGACGAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA
KDN01_0038_D05.b : GTTTAAGGGGCAGGAGGGGACGAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA
PTG01_0043_C05.b : GTTTAAGGGGCAGGAAGGGACCAAGTATTTCCAAGACCTGCTTGGCCATGGATCTGACTA


20110601C-002896 : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTCCAGGTCAAGAT
                   ---------+---------+---------+---------+---------+---------+ 514
UTR01_0012_A10.b : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTTCAGGTCAAGAT
THY01_0052_H11.b : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTCCAGGTCAAGAT
CLNT1_0069_F06.b : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTCCAGGTCAAGAT
KDN01_0100_B04.b : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTCCAGGTCAAGAT
THY01_0020_C04.b : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTCCAGGTCAAGAT
PTG01_0041_G03.b : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTCCAGGTCAAGAT
KDN01_0038_D05.b : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTCCAGGTCAAGAT
PTG01_0043_C05.b : CTCACTAAGTGAGGTGCTGTGGGTCTGCGCCAACCTCTTCAGTGACGTCCAGGTCAAGAT


20110601C-002896 : GAGCCATAAGAGGATCATGCTTTTCACCAATGACGACGACCCCCACGGCAATGACAGCGC
                   ---------+---------+---------+---------+---------+---------+ 574
UTR01_0012_A10.b : GAGCCATAAGAGGATCATGCTTTTCACCAATGACGACGACCCCCACGGCAACGACAGTGC
THY01_0052_H11.b : GAGCCATAAGAGGATCATGCTTTTCACCAATGACGACGACCCCCACGGCAATGACAGCGC
CLNT1_0069_F06.b : GAGCCATAAGAGGATCATGCTTTTCACCAATGACGACGACCCCCACGGCAACGACAGTGC
KDN01_0100_B04.b : GAGCCATAAGAGGATCATGCTTTTCACCAATGACGACGACCCCCACGGCAATGACAGCGC
THY01_0020_C04.b : GAGCCATAAGAGGATCATGCTTTTCACCAATGACGACGACCCCCACGGCAATGACAGCGC
PTG01_0041_G03.b : GAGCCATAAGAGGATCATGCTTTTCACCAATGACGACGACCCCCGCGGCAATGACAGCGC
KDN01_0038_D05.b : GAGCCATAAGAGGATCATGCTTTTCACCAATGACGACGACCCCCACGGCAATGACAGCGC
PTG01_0043_C05.b : GAGCCATAAGAAGATCATGCTTTTCACCAATGACGACGACCCCCACGGCAATGACAGCGC


20110601C-002896 : CAAAGCCAGCCGGGCAAGGACCAAAGCTGGGGACCTCCGTGACACAGGTATCTTCCTGGA
                   ---------+---------+---------+---------+---------+---------+ 634
UTR01_0012_A10.b : CAAAGCCAGCCGGGCCAGGACCAAAGCTGGGGACCTCCGTGACACAGGTATCTTCCTGGA
THY01_0052_H11.b : CAAAGCCAGCCGGGCAAGGACCAAAGCTGGGGACCTCCGTGACACAGGTATCTTCCTGGA
CLNT1_0069_F06.b : CAAAGCCAGCCGGGCCAGGACCAAAGCTGGGGACCTCCGTGACACAGGTATCTTCCTGGA
KDN01_0100_B04.b : CAAAGCCAGCCGGGCAAGGACCAAAGCTGGGGACCTCCGTGACACAGGTATCTTCCTGGA
THY01_0020_C04.b : CAAAGCCAGCCGGGCAAGGACCAAAGCTGGGGACCTCCGTGACACAGGTATCTTCCTGGA
PTG01_0041_G03.b : CAAAGCCAGCCGGGCCAGGACCAAAGCTGGGGACCTCCGTGACACAGGTATCTTCCTGGA
KDN01_0038_D05.b : CAAAGCCAGCCGGGCAAGGACCAAAGCTGGGGACCTCCGTGACACAGGTATCTTCCTGGA
PTG01_0043_C05.b : CCAAGCCAGCCGGGCCAGGACCAAAGCTGGGGACCTCCGTGACACAAGTATCTTCCTGGA


20110601C-002896 : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCAT
                   ---------+---------+---------+---------+---------+---------+ 694
UTR01_0012_A10.b : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCAT
THY01_0052_H11.b : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCAT
CLNT1_0069_F06.b : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCAT
KDN01_0100_B04.b : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCAT
THY01_0020_C04.b : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCAT
PTG01_0041_G03.b : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCAT
KDN01_0038_D05.b : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGTTCTACAGAGATATCAT
PTG01_0043_C05.b : CTTGATGCACCTGAAGAAGCCTGGGGGCTTTGACATATCCTTGGTCTACAGAGATATCAT


20110601C-002896 : CAGTGTGGCAGAGGATGAGGACATAGGGGTTCACTTTGAGGAGTCGCACAAGCTCGAGGA
                   ---------+---------+---------+---------+---------+---------+ 754
UTR01_0012_A10.b : CAGatgacaaacggaaggtgccctttactgaaaaaatcatggcaaacccagagcaggtgg
THY01_0052_H11.b : CAGTGTGGCAGAGGATGAGGACATAGGGGTTCACTTTGAGGAGTCGCACAAGCTCGAGGA
CLNT1_0069_F06.b : CAGTGTGGCAGAGGATGAGGACATAGGGGGTCACTTTGAGGAGTCGCACAAGCTCGAGGA
KDN01_0100_B04.b : CAGTGTGGCAGAGGATGAGGACATAGGGGTTCACTTTGAGGAGTCGCACAAGCTCGAGGA
THY01_0020_C04.b : CAGTGTGGCAGAGGATGAGGACATAGGGGTTCACTTTGAGGAGTCGacaagctccgagac
PTG01_0041_G03.b : CAGTGTGGCAGAGGATGAGGACATAGGGGTTCACTTTGAGGAGTCGCACAAGCTCGAGGA
KDN01_0038_D05.b : CAGTGTGGCAGAGGATGAGGACATAGGGGTTCACTTTGAGGAGTCGCACAAGCTCGAGGA
PTG01_0043_C05.b : CAGTGTGGCACAGGATGAGGACATAGGGGTTCACTTTG*GGAGTCGCACAAACTCTAGGA


20110601C-002896 : CCTGTTGAGGAAGGTCCGTGCCAAGGAGACCAGGAAGCGTGTGCTCCACAGGTTGAAACT
                   ---------+---------+---------+---------+---------+---------+ 814
UTR01_0012_A10.b : acaagatgaagggcattgttcagaagctc                              
THY01_0052_H11.b : CCTGTTGAGGAAGGTCCGTGCCAAGGAGACCAGGAAGCGTGTGCTCCACg         
CLNT1_0069_F06.b : CCTGTTGAGGAAGGTCCGTGCCAAGGGAGACAGGAAGCGTGTGCTCCACAGGTTGAAACT
KDN01_0100_B04.b : CCTGTTGAGGAAGGTCCGTGCCAAGGAGACCAGGAAGCGTGTGCTCCACAGGTTGAAACT
THY01_0020_C04.b : ctgatgaagaggtccgtgtcaaggagaccagaagcgtgtgctcacagggttgaacttaag
PTG01_0041_G03.b : CCTGGTTGAGAAGGTCCGTGCCAAGGAGACCAGGAAGCGTGTGCTCCACAGGTTGAAACT
KDN01_0038_D05.b : CCTGTTGAGGAATGTCCGTGCCAAGGAGACCAGGAAGCGTGTGCTCCACAGGTTGGAACT
PTG01_0043_C05.b : ACTGGTTGAGAAAGTCCGTGCCAAGGAGACCAcaaacgtgtgctccacagttgaaactta


20110601C-002896 : TAAGCTCAGCAAAGATGTAGCGCTCACTGTCGGCATTTACAATTTGGTCCAGAAGGCTTA
                   ---------+---------+---------+---------+---------+---------+ 874
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : TAAGCTCAGCAAAGATGTAGCGCTCACTGTCGGCATTTACATTTTTGTCCAaaagcttac
KDN01_0100_B04.b : TAAGCTCAGCAAAGATGTAGCGCTCACTGTCGGCATTTACAATTTGGTCCAGAAGGCTTA
THY01_0020_C04.b : ctcccaaagatgtgcgctcctgtcgcctttacat                         
PTG01_0041_G03.b : TAAGCTCAGCAAAGATGTAGCGCTCACTGTCGGCATTTTACATTTGGTCCAGA*GGCCTA
KDN01_0038_D05.b : TAAGCTCAGCAAAGATGTAGCGCTCACTGTCGGCATTTTC*ATTTGGTCCAGAAGGCTTA
PTG01_0043_C05.b : agctccgcaaaaatgtaccgctcatgtcggcattttacatttgttcagaagggttacaac


20110601C-002896 : CAAACCTTTCCCGGTGAGGCTTTATCGGGGAACAAATGACCCGGTGAAAACAAGACCCGG
                   ---------+---------+---------+---------+---------+---------+ 934
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : aaactttcccggtgaagcttttatcggaaacaaaatgaagggggaaaaccaaacccggac
KDN01_0100_B04.b : CAAACCTTTTCCGGTGAGGCTTTATCGGGGAACAAatgaaccngtgaaaaccnagacccg
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : CAAACCTTTCCCGGTGGAGCCTTTTCGGGAAACAAATGACCCGGTGAAAACAAGACCCGG
KDN01_0038_D05.b : C*AACCTTTCCCGGGGAGGCTTTATCGGaaacaatgaacggtgaaaacccagacccggag
PTG01_0043_C05.b : ctttcccgggggaggcttttcgggaacaaaatgacccggggaaaccaaaccccgactttt


20110601C-002896 : AAGTTTAATGTAAACACGGGCA......................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : gtttatggtaacccagcagtttgcttttgctaacgaccccaaaagtcttcgaccttggga
KDN01_0100_B04.b : gacgtttaatgtaaacacaggcagtttgcttttgcctagcgacccaagaagtctcagacc
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : AAGTTTAATGTAAACACGGGCAtttgcttttgcctacgacaccagaggtccccgaccttg
KDN01_0038_D05.b : tttaatgtaaacccggcagttgctttttgctaccgacccaagaggtctcaaccttgggat
PTG01_0043_C05.b : tttgttaaaccagccggtttgttttgcctaccaccccccaagggctccaaccctggaaac


20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : aaccttcaattgtttaaaaaaaaaaaacaaaatgctgaccgttctatgaccgggtttgat
KDN01_0100_B04.b : tatgggaatcgtcagattgtattagagaaagaagaacagaaatgctgaaacggttcgatg
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : gggatcgtcaaatggtttaagaaagaaaaccgaatggttaacggttccataaaccggttg
KDN01_0038_D05.b : cgtccgattgatttaaaaagaaaaacaaaatgctaaacggtctctaaaccgggttgattc
PTG01_0043_C05.b : cccccaatgtttttaaaaaaaaaaaacaaaatgttgaaactttctttaacccggttattc


20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : tccctccggttcaacccctgggatgggaaaaggttctttcgtgggggcccccttttcggt
KDN01_0100_B04.b : aaccgggtttgatctcatcggtttcagcccttgggatgctgaagagcatcattactgaag
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : attccaccggttcaacccttgggaagggtaaaggcctttttcgggggccccctttttcgg
KDN01_0038_D05.b : cttcggtttcacccttggaaagggaaaaggttcttactgaggccctcccttctgttcccg
PTG01_0043_C05.b : cctcggtttaacccctgggaaagtgaaaagggaccttttttggggccccctttttgttcc


20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : accccaggaaccttggggagggagtcaaccttttcgtgtttttccccagttttggaaaag
KDN01_0100_B04.b : ccttcgctgtcctgtacccgaagagtcctggtgatgggacttaacctgttcatgctctgc
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : accccggggaccctgtgaaggggacccaccggttccggctttgcccaattttggaaaggg
KDN01_0038_D05.b : agaatcctgggaagggaatctaacctgtctgctcgctcccagggttggaaagagactgga
PTG01_0043_C05.b : ccagaaccccgtggaagggaaaaaacccgtttctggtctttcacaattttttgaaaaaaa


20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : agattgggattgggatatacccccccaaccccccccctttttggccggccccccgaaaga
KDN01_0100_B04.b : tccaagttttgaaaaggagtctgcctgttcaatttcccccgaaaacctcccctttttggc
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : ctgggtgtggcaaataccccccaaaccccccctttttgggcccttccccggaagaggtgg
KDN01_0038_D05.b : tatgcaataccccccaaaactcccctatttgggccgtagccgcaaagagctggaccaaat
PTG01_0043_C05.b : acattgttttggaaaaacccccccaaacccccccctttttgtcccttcccccggaaaggg


20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : atgggacaaaaattggggtccccgtttttctcttttctctgtttaaaaagagggccttat
KDN01_0100_B04.b : cctgatcccggaaaagatgggtgacggatttggggacccggggttcctttttttcctatg
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : aaccaaatttggggccccgcttttctttttttttctatggaaaagggggccttttaaatg
KDN01_0038_D05.b : tgggacccgggttcctctttttccttgtaaaggagggcttttaaattggaccagagggaa
PTG01_0043_C05.b : tgggaccaaaattggggcccccccttttttttttttttttgtttaaaaagaggccttttt


20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b : aaattggcccaccggggagg                                       
KDN01_0100_B04.b : taaaaaggagggccttttgaaatggaacccacaggggaaaaggctgttaaccctttaaag
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : gtacccacaggggaaaggggttttacccttttaggaaaattaaacgcggccccataaaga
KDN01_0038_D05.b : aaaagtttcaaccttttaaggacttacccgcccctctaaattcttttttgagcaaattat
PTG01_0043_C05.b : aaattggccccccggggggagaagggcttaacccctcttaaaaaaattaaaccgccgccc


20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b :                                                             
KDN01_0100_B04.b : aactttaacgggccccctcaaaagcttttttttaacaaagtattt              
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b : ctgtttttataacaaaatatactcggggaagggcgggt                     
KDN01_0038_D05.b : tccgaagaaggccgggaagcccnnnncagttaaaaaagggtgtgaacancctcgagagtt
PTG01_0043_C05.b : ccccaaggcgttttttttggtaaaaatattctctccggaaaaagcccgcgtttttccccc


20110601C-002896 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 956
UTR01_0012_A10.b :                                                             
THY01_0052_H11.b :                                                             
CLNT1_0069_F06.b :                                                             
KDN01_0100_B04.b :                                                             
THY01_0020_C04.b :                                                             
PTG01_0041_G03.b :                                                             
KDN01_0038_D05.b : ttcttttctcttannnnnnnnnnnnnnnggnngnng                       
PTG01_0043_C05.b : cccgcgcgaaaaaaaaccttataaccacaatcccctatggtgtgcttc