Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-003079

Sequence: [FASTA format sequence] CTTGGGCGCC GGTTCCCTCG ACCCTAACCC GGCGGTTTTC CCCGTGCTGC CGTCCGCCCG GGAGGAGGCT AAACTTGGAG CCAGCTATTA TCTGCGGAGT CCCTTGAAAA GGCCACCCCG AGATCTCCCC AGCGCTGCTT CATAGCCCGG CAGCACCATG GCCTCAGCAC TGCCCTTGGC AAGGATGTGG GATGAGGTCA CGTGCTCCAT CTGCCTGGAT CCCATGGTGG AGCCCGTGAG CATCGAATGT GGCCACAGCT TCTGCCAGGA ATGCATCTCC GAGGTTGGGA AGGATGGGGG CAGCGTCTGT CCTGTGTGCC GGCAGCACTT CCTGCTCAGG AACCTCCGGC CCAATCGGCA GGTGGCCAAC ATGGTGGATA ACCTCAAAGA GATGAGCCAG GGGGTCAAGG AAGGCCCGCA GTGGGAGCTG TGTGCGGTGC ACGGAGAGAA GCTTCACCTG TTCTGTAAGG ACGATGGGAA GGTCCTTTGC TGGGTGTGTT CCCAGTCCCA GAAACACCGG GACCACACCA TGGTCCCCAT TGAGGAGGCG GCTCAGGAGT ACCAGGAGAA GCTCCAGGTG GCACTCGAGA AACTCAGAAA TAAACAGGAG CAGGCTGAGA AGCTGGAAGC GGATATTGCA ACGAAGAGAG CAGCCTGGAA GGGGAAGGTT GAGGCCCACA AACTGAGGAT CCACGAAGAG TTTGTCCGGC AGAAAAACTT CCTGGCAGAA GAGGAGCAGA GGCAGCTGCA GAAGCTGGAG GAGGAGGAGC GGGAACAGCT GAAAGCCCTG GGGGCCACAG AAGCCAGGCT GGCCCAGCAG AGCCAGGCCC TGCAGGAGCT GATCGCAGAG CTGGAGCGGA GGAGTCGGGG CCCCATGCTG GAGCTGCTAC AGGTGAGGCC TGAGGACAGC CCCCCCCCCA CCCCGAGAGT CAAGGAGAAG TTGAAAAAAG CCAGAGGGAG CGCCCCTTGT GGCTCAGTGG GTTAAGGACC AAACACACAG TGTCCGTGGA GGGTGCAAGT TCGGGGTTCC CTTCCTGGCC CTCACTTGGT GGAATTAAGG ATCCAAAACT GCCTGCCCCC TGGCAGTGGA GGTTGGCAAA AGCCACCCCG GAATTTGGGG GTTGCCCGGG GCTGTGGCCC AAAGCCCTCC AACCGCACCC TTAAAAATTT ACCCCCCCAA CCCTGGGAAA ATTTCCCAAT AGGGAAACAA GGGGCGGGCC AATAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
TRIM21 E3 ubiquitin-protein ligase TRIM21 [Homo sapiens]. 339 3e-93 O

TRIM6 tripartite motif-containing protein 6 isoform 1 [Homo sapiens]. 216 4e-56 O

TRIM6-TRIM34 tripartite motif-containing 6 and tripartite motif-containing 34 [Homo sapiens]. 216 4e-56 O

TRIM6 tripartite motif-containing protein 6 isoform 2 [Homo sapiens]. 215 8e-56 O

TRIM5 tripartite motif-containing protein 5 isoform alpha [Homo sapiens]. 209 4e-54 O

TRIM5 tripartite motif-containing protein 5 isoform gamma [Homo sapiens]. 209 4e-54 O

TRIM5 tripartite motif-containing protein 5 isoform delta [Homo sapiens]. 209 4e-54 O

TRIM22 E3 ubiquitin-protein ligase TRIM22 isoform 1 [Homo sapiens]. 198 1e-50 O

TRIM34 tripartite motif-containing protein 34 isoform 3 [Homo sapiens]. 193 3e-49 O

TRIM34 tripartite motif-containing protein 34 isoform 1 [Homo sapiens]. 193 3e-49 O

Locus	Definition	Score	E value	FL
TRIM21	E3 ubiquitin-protein ligase TRIM21 [Homo sapiens].	339	3e-93	O
TRIM6	tripartite motif-containing protein 6 isoform 1 [Homo sapiens].	216	4e-56	O
TRIM6-TRIM34	tripartite motif-containing 6 and tripartite motif-containing 34 [Homo sapiens].	216	4e-56	O
TRIM6	tripartite motif-containing protein 6 isoform 2 [Homo sapiens].	215	8e-56	O
TRIM5	tripartite motif-containing protein 5 isoform alpha [Homo sapiens].	209	4e-54	O
TRIM5	tripartite motif-containing protein 5 isoform gamma [Homo sapiens].	209	4e-54	O
TRIM5	tripartite motif-containing protein 5 isoform delta [Homo sapiens].	209	4e-54	O
TRIM22	E3 ubiquitin-protein ligase TRIM22 isoform 1 [Homo sapiens].	198	1e-50	O
TRIM34	tripartite motif-containing protein 34 isoform 3 [Homo sapiens].	193	3e-49	O
TRIM34	tripartite motif-containing protein 34 isoform 1 [Homo sapiens].	193	3e-49	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Trim21 E3 ubiquitin-protein ligase TRIM21 [Mus musculus]. 296 2e-80 O

Trim21 E3 ubiquitin-protein ligase TRIM21 [Mus musculus]. 296 2e-80 O

Trim6 tripartite motif-containing protein 6 [Mus musculus]. 208 6e-54 O

Trim34b tripartite motif-containing 34B [Mus musculus]. 177 2e-44 O

Trim58 tripartite motif-containing protein 58 [Mus musculus]. 176 4e-44 O

Trim30-2 PREDICTED: tripartite motif-containing protein 30 [Mus musculus]. 175 6e-44 O

Trim30-2 PREDICTED: tripartite motif-containing protein 30 [Mus musculus]. 175 6e-44 O

Trim34a tripartite motif-containing protein 34 [Mus musculus]. 172 4e-43 O

LOC100046632 PREDICTED: tripartite motif-containing protein 30-like isoform 1 [Mus musculus]. 171 1e-42 O

Trim12c tripartite motif-containing 12C [Mus musculus]. 170 2e-42 O

Locus	Definition	Score	E value	FL
Trim21	E3 ubiquitin-protein ligase TRIM21 [Mus musculus].	296	2e-80	O
Trim21	E3 ubiquitin-protein ligase TRIM21 [Mus musculus].	296	2e-80	O
Trim6	tripartite motif-containing protein 6 [Mus musculus].	208	6e-54	O
Trim34b	tripartite motif-containing 34B [Mus musculus].	177	2e-44	O
Trim58	tripartite motif-containing protein 58 [Mus musculus].	176	4e-44	O
Trim30-2	PREDICTED: tripartite motif-containing protein 30 [Mus musculus].	175	6e-44	O
Trim30-2	PREDICTED: tripartite motif-containing protein 30 [Mus musculus].	175	6e-44	O
Trim34a	tripartite motif-containing protein 34 [Mus musculus].	172	4e-43	O
LOC100046632	PREDICTED: tripartite motif-containing protein 30-like isoform 1 [Mus musculus].	171	1e-42	O
Trim12c	tripartite motif-containing 12C [Mus musculus].	170	2e-42	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC485226 PREDICTED: similar to 52 kDa Ro protein (Sjogren syndrome type A antigen) (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) [Canis familiaris]. 324 1e-88 O

cOR52B8 PREDICTED: similar to tripartite motif-containing 6 and tripartite motif-containing 34 [Canis familiaris]. 214 1e-55 O

TRIM6 tripartite motif-containing protein 6 [Canis lupus familiaris]. 212 7e-55 O

TRIM34 tripartite motif-containing protein 34 [Canis lupus familiaris]. 193 3e-49 O

LOC482216 PREDICTED: similar to tripartite motif-containing 58 [Canis familiaris]. 186 3e-47 O

LOC485284 PREDICTED: similar to Tripartite motif protein 22 (RING finger protein 94) (50 kDa stimulated trans-acting factor) (Staf-50) [Canis familiaris]. 174 1e-43 O

LOC485233 PREDICTED: similar to ring finger protein 137 [Canis familiaris]. 167 2e-41 O

LOC482205 PREDICTED: similar to tripartite motif-containing 11 isoform 1 [Canis familiaris]. 145 6e-35 O

LOC482205 PREDICTED: similar to tripartite motif-containing 11 isoform 2 [Canis familiaris]. 144 2e-34 O

LOC482204 PREDICTED: similar to tripartite motif protein 17 [Canis familiaris]. 144 1e-34 O

Locus	Definition	Score	E value	FL
LOC485226	PREDICTED: similar to 52 kDa Ro protein (Sjogren syndrome type A antigen) (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) [Canis familiaris].	324	1e-88	O
cOR52B8	PREDICTED: similar to tripartite motif-containing 6 and tripartite motif-containing 34 [Canis familiaris].	214	1e-55	O
TRIM6	tripartite motif-containing protein 6 [Canis lupus familiaris].	212	7e-55	O
TRIM34	tripartite motif-containing protein 34 [Canis lupus familiaris].	193	3e-49	O
LOC482216	PREDICTED: similar to tripartite motif-containing 58 [Canis familiaris].	186	3e-47	O
LOC485284	PREDICTED: similar to Tripartite motif protein 22 (RING finger protein 94) (50 kDa stimulated trans-acting factor) (Staf-50) [Canis familiaris].	174	1e-43	O
LOC485233	PREDICTED: similar to ring finger protein 137 [Canis familiaris].	167	2e-41	O
LOC482205	PREDICTED: similar to tripartite motif-containing 11 isoform 1 [Canis familiaris].	145	6e-35	O
LOC482205	PREDICTED: similar to tripartite motif-containing 11 isoform 2 [Canis familiaris].	144	2e-34	O
LOC482204	PREDICTED: similar to tripartite motif protein 17 [Canis familiaris].	144	1e-34	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
TRIM21 E3 ubiquitin-protein ligase TRIM21 [Bos taurus]. 383 e-106 O

TRIM6 tripartite motif-containing protein 6 [Bos taurus]. 215 6e-56 O

LOC516599 PREDICTED: tripartite motif protein 5 alpha-like isoform 2 [Bos taurus]. 197 2e-50 O

LOC516599 PREDICTED: tripartite motif-containing 6-like [Bos taurus]. 197 2e-50 O

TRIM5 tripartite motif-containing protein 5 [Bos taurus]. 192 4e-49 O

TRIM5 tripartite motif-containing protein 5 [Bos taurus]. 192 7e-49 O

TRIM34 tripartite motif-containing protein 34 [Bos taurus]. 191 1e-48 O

TRIM58 PREDICTED: tripartite motif protein 21 [Bos taurus]. 187 2e-47 O

TRIM58 PREDICTED: tripartite motif protein 21-like [Bos taurus]. 187 2e-47 O

TRIM38 tripartite motif-containing protein 38 [Bos taurus]. 166 4e-41 O

Locus	Definition	Score	E value	FL
TRIM21	E3 ubiquitin-protein ligase TRIM21 [Bos taurus].	383	e-106	O
TRIM6	tripartite motif-containing protein 6 [Bos taurus].	215	6e-56	O
LOC516599	PREDICTED: tripartite motif protein 5 alpha-like isoform 2 [Bos taurus].	197	2e-50	O
LOC516599	PREDICTED: tripartite motif-containing 6-like [Bos taurus].	197	2e-50	O
TRIM5	tripartite motif-containing protein 5 [Bos taurus].	192	4e-49	O
TRIM5	tripartite motif-containing protein 5 [Bos taurus].	192	7e-49	O
TRIM34	tripartite motif-containing protein 34 [Bos taurus].	191	1e-48	O
TRIM58	PREDICTED: tripartite motif protein 21 [Bos taurus].	187	2e-47	O
TRIM58	PREDICTED: tripartite motif protein 21-like [Bos taurus].	187	2e-47	O
TRIM38	tripartite motif-containing protein 38 [Bos taurus].	166	4e-41	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
TRIM21 52 kDa Ro protein [Sus scrofa]. 445 e-125 O

LOC733579 tripartite motif protein TRIM5 [Sus scrofa]. 207 1e-53 O

TRIM58 PREDICTED: tripartite motif-containing protein 58 [Sus scrofa]. 183 2e-46 O

LOC100525062 PREDICTED: tripartite motif-containing protein 6-like [Sus scrofa]. 182 4e-46

TRIM38 PREDICTED: tripartite motif-containing protein 38 [Sus scrofa]. 162 3e-40 O

TRIM4 PREDICTED: tripartite motif-containing protein 4 [Sus scrofa]. 156 2e-38 O

TRIM26 tripartite motif-containing protein 26 [Sus scrofa]. 147 2e-35 O

LOC100515821 PREDICTED: e3 ubiquitin-protein ligase TRIM17-like [Sus scrofa]. 144 8e-35 O

TRIM39 tripartite motif-containing protein 39 [Sus scrofa]. 143 2e-34 O

LOC100622028 PREDICTED: tripartite motif-containing protein 6-like [Sus scrofa]. 140 1e-33 O

Locus	Definition	Score	E value	FL
TRIM21	52 kDa Ro protein [Sus scrofa].	445	e-125	O
LOC733579	tripartite motif protein TRIM5 [Sus scrofa].	207	1e-53	O
TRIM58	PREDICTED: tripartite motif-containing protein 58 [Sus scrofa].	183	2e-46	O
LOC100525062	PREDICTED: tripartite motif-containing protein 6-like [Sus scrofa].	182	4e-46
TRIM38	PREDICTED: tripartite motif-containing protein 38 [Sus scrofa].	162	3e-40	O
TRIM4	PREDICTED: tripartite motif-containing protein 4 [Sus scrofa].	156	2e-38	O
TRIM26	tripartite motif-containing protein 26 [Sus scrofa].	147	2e-35	O
LOC100515821	PREDICTED: e3 ubiquitin-protein ligase TRIM17-like [Sus scrofa].	144	8e-35	O
TRIM39	tripartite motif-containing protein 39 [Sus scrofa].	143	2e-34	O
LOC100622028	PREDICTED: tripartite motif-containing protein 6-like [Sus scrofa].	140	1e-33	O

Assembly Members: 15 TOP

Library Plate Loc. Read Name Accession Full Seq.

ITT01 0066 G08 ITT01_0066_G08.b BW981908 AK393012
MLN01 0068 E06 MLN01_0068_E06.b CJ013034
OVR01 0018 F05 OVR01_0018_F05.b BP143642
OVR01 0034 E11 OVR01_0034_E11.b BP143424 AK234261
OVR01 0063 H08 OVR01_0063_H08.b BW965273
OVRM1 0107 A02 OVRM1_0107_A02.b BP145012
OVRT1 0139 H12 OVRT1_0139_H12.b HX237988
PCT01 0023 H09 PCT01_0023_H09.b FS696205
PTG01 0013 E05 PTG01_0013_E05.b FS705553
SKNB1 0080 B05 SKNB1_0080_B05.b AK349885
TES01 0031 C05 TES01_0031_C05.b CJ032043
THY01 0021 A12 THY01_0021_A12.b BP160492 AK238718
THY01 0038 D06 THY01_0038_D06.b BP163625
THY01 0207 G09 THY01_0207_G09.b BP462629
UTR01 0050 D10 UTR01_0050_D10.b BP463755

SNPs: 4 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
129 C 6 1 0.538 W N CCC/P
T 6 0 0.462 CTC/L
510 A 6 1 0.500 W N CAG/Q
G 7 0 0.500 CGG/R
635 A 8 0 0.727 W N ATT/I
G 3 0 0.273 GTT/V
755 C 5 0 0.714 W N CTG/L
G 2 0 0.286 GTG/V

Alignment: TOP

20110601C-003079 : ..................................CTTGGGCGCCGGTTCCCTCGACCCTA
                   ---------+---------+---------+---------+---------+---------+ 26
SKNB1_0080_B05.b :       nnnnnttcgctgtggctctggagagcctCTTGGGCGCCGGTTCCCTCGACCCTA
ITT01_0066_G08.b :                                               nnggatgaacaxxx
OVR01_0063_H08.b :                   nttgctaggactaaaacxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0034_E11.b :                      ggagacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PCT01_0023_H09.b :                                                             
THY01_0021_A12.b :                 aagcaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0139_H12.b :               nnnggagagttannnnnnnnccgttagcgnacgnantgxxxxxxxx
THY01_0038_D06.b :                                       gggggcactattagxxxxxxxx
THY01_0207_G09.b :                                   catttttgggtgcxxxxxxxxxxxxx
OVR01_0018_F05.b :                                      ttgggagaacctaatagxxxxxx
TES01_0031_C05.b :                                                             
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b :                                                            n
UTR01_0050_D10.b :                                                  catttttggtg
MLN01_0068_E06.b : ngggttttcgnnggttaggatatgacagtttgtacxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-003079 : ACCCGGCGGTTTTCCCCGTGCTGCCGTCCGCCCGGGAGGAGGCTAAACTTGGAGCCAGCT
                   ---------+---------+---------+---------+---------+---------+ 86
SKNB1_0080_B05.b : ACCCGGCGGTTTTCCCCGTGCTGCCGTCCGCCCGGGAGGAGGCTGGGCTGTGAACCGACT
ITT01_0066_G08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggaAAACTTGGAGCCAGCT
OVR01_0063_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgtgAAACTTGGAGCCAGCT
OVR01_0034_E11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcgctggAAACTTGGAGCCAGCT
PCT01_0023_H09.b :     nnnnccgctttnnnnnnatactgcgttgtgcacgggaagtgAACTTGGAGCCAGCT
THY01_0021_A12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTGGAGCCAGCT
OVRT1_0139_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTGGAGCCAGCT
THY01_0038_D06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtT
THY01_0207_G09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0018_F05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TES01_0031_C05.b :                                                acacgttggctct
OVRM1_0107_A02.b :   tagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PTG01_0013_E05.b : cccatatatnnngggactaagcagcggnaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0050_D10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0068_E06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxcttgttggcctactggagtgaaacttggagccag


20110601C-003079 : ATTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA
                   ---------+---------+---------+---------+---------+---------+ 144
SKNB1_0080_B05.b : TCCAAGTCCTCCGGAGCCCAGGGCGGGGCCACCCCGAGATCTCCTCAGCGCTGCTTCATA
ITT01_0066_G08.b : ATTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCTCAGCGCTGCTTCATA
OVR01_0063_H08.b : ATTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCTCAGCGCTGCTTCATA
OVR01_0034_E11.b : ATTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCTCAGCGCTGCTTCATA
PCT01_0023_H09.b : ATTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA
THY01_0021_A12.b : ATTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA
OVRT1_0139_H12.b : ATTA**TCTGCGGAATCCCTTGAAAAGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA
THY01_0038_D06.b : ATTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA
THY01_0207_G09.b : xTTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA
OVR01_0018_F05.b : xTTA**TCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCTCAGCGCTGCTTCATA
TES01_0031_C05.b : ggATTATCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCTCAGCGCTGCTTCATA
OVRM1_0107_A02.b : xxxtcATCTGCGGAGTCCCTTGAAAAGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA
PTG01_0013_E05.b : xxxxxxTCTGCGGAATCCCTTGAAAAGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA
UTR01_0050_D10.b : xxxxxxxxxxxxxxGTCCCTTGAAAAGGCCACCCCGAGATCTCCTCAGCGCTGCTTCATA
MLN01_0068_E06.b : ctattatctgcggagtcccttgaaaaGGCCACCCCGAGATCTCCCCAGCGCTGCTTCATA


20110601C-003079 : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
                   ---------+---------+---------+---------+---------+---------+ 204
SKNB1_0080_B05.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
ITT01_0066_G08.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
OVR01_0063_H08.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
OVR01_0034_E11.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
PCT01_0023_H09.b : GCCCAGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
THY01_0021_A12.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
OVRT1_0139_H12.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
THY01_0038_D06.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
THY01_0207_G09.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
OVR01_0018_F05.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
TES01_0031_C05.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
OVRM1_0107_A02.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
PTG01_0013_E05.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
UTR01_0050_D10.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG
MLN01_0068_E06.b : GCCCGGCAGCACCATGGCCTCAGCACTGCCCTTGGCAAGGATGTGGGATGAGGTCACGTG


20110601C-003079 : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
                   ---------+---------+---------+---------+---------+---------+ 264
SKNB1_0080_B05.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
ITT01_0066_G08.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
OVR01_0063_H08.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
OVR01_0034_E11.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
PCT01_0023_H09.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
THY01_0021_A12.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
OVRT1_0139_H12.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
THY01_0038_D06.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
THY01_0207_G09.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
OVR01_0018_F05.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
TES01_0031_C05.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
OVRM1_0107_A02.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
PTG01_0013_E05.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
UTR01_0050_D10.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG
MLN01_0068_E06.b : CTCCATCTGCCTGGATCCCATGGTGGAGCCCGTGAGCATCGAATGTGGCCACAGCTTCTG


20110601C-003079 : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
                   ---------+---------+---------+---------+---------+---------+ 324
SKNB1_0080_B05.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
ITT01_0066_G08.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
OVR01_0063_H08.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
OVR01_0034_E11.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
PCT01_0023_H09.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
THY01_0021_A12.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
OVRT1_0139_H12.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
THY01_0038_D06.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
THY01_0207_G09.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
OVR01_0018_F05.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
TES01_0031_C05.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
OVRM1_0107_A02.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
PTG01_0013_E05.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
UTR01_0050_D10.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA
MLN01_0068_E06.b : CCAGGAATGCATCTCCGAGGTTGGGAAGGATGGGGGCAGCGTCTGTCCTGTGTGCCGGCA


20110601C-003079 : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
                   ---------+---------+---------+---------+---------+---------+ 384
SKNB1_0080_B05.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
ITT01_0066_G08.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
OVR01_0063_H08.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
OVR01_0034_E11.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
PCT01_0023_H09.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
THY01_0021_A12.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
OVRT1_0139_H12.b : GCACTTCCTGCTAAGGAACCTCCGGCTCAATCGGCAGGTGGCCAACATGGTGGATAACCT
THY01_0038_D06.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
THY01_0207_G09.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
OVR01_0018_F05.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
TES01_0031_C05.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
OVRM1_0107_A02.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
PTG01_0013_E05.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
UTR01_0050_D10.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT
MLN01_0068_E06.b : GCACTTCCTGCTCAGGAACCTCCGGCCCAATCGGCAGGTGGCCAACATGGTGGATAACCT


20110601C-003079 : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
                   ---------+---------+---------+---------+---------+---------+ 444
SKNB1_0080_B05.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
ITT01_0066_G08.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
OVR01_0063_H08.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
OVR01_0034_E11.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
PCT01_0023_H09.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
THY01_0021_A12.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
OVRT1_0139_H12.b : CAAAGAGATGACCCAGGGGGTCAAGGAAGGCCCGCACTGGGAGCTGTGTGCGGTGCACAG
THY01_0038_D06.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
THY01_0207_G09.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
OVR01_0018_F05.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
TES01_0031_C05.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
OVRM1_0107_A02.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
PTG01_0013_E05.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
UTR01_0050_D10.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCGGTGCACGG
MLN01_0068_E06.b : CAAAGAGATGAGCCAGGGGGTCAAGGAAGGCCCGCAGTGGGAGCTGTGTGCAGTGCACGG


20110601C-003079 : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
                   ---------+---------+---------+---------+---------+---------+ 504
SKNB1_0080_B05.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
ITT01_0066_G08.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
OVR01_0063_H08.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
OVR01_0034_E11.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
PCT01_0023_H09.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
THY01_0021_A12.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
OVRT1_0139_H12.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
THY01_0038_D06.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
THY01_0207_G09.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
OVR01_0018_F05.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
TES01_0031_C05.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
OVRM1_0107_A02.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
PTG01_0013_E05.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
UTR01_0050_D10.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA
MLN01_0068_E06.b : AGAGAAGCTTCACCTGTTCTGTAAGGACGATGGGAAGGTCCTTTGCTGGGTGTGTTCCCA


20110601C-003079 : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
                   ---------+---------+---------+---------+---------+---------+ 564
SKNB1_0080_B05.b : GTCCCGGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
ITT01_0066_G08.b : GTCCCGGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
OVR01_0063_H08.b : GTCCCGGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
OVR01_0034_E11.b : GTCCCGGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
PCT01_0023_H09.b : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
THY01_0021_A12.b : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
OVRT1_0139_H12.b : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGATGCGGCTCATGAGTACCA
THY01_0038_D06.b : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
THY01_0207_G09.b : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
OVR01_0018_F05.b : GTCCCGGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
TES01_0031_C05.b : GTCCCGGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
OVRM1_0107_A02.b : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
PTG01_0013_E05.b : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
UTR01_0050_D10.b : GTCCCGGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA
MLN01_0068_E06.b : GTCCCAGAAACACCGGGACCACACCATGGTCCCCATTGAGGAGGCGGCTCAGGAGTACCA


20110601C-003079 : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
                   ---------+---------+---------+---------+---------+---------+ 624
SKNB1_0080_B05.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
ITT01_0066_G08.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
OVR01_0063_H08.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
OVR01_0034_E11.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
PCT01_0023_H09.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
THY01_0021_A12.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
OVRT1_0139_H12.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCATAAATAAACAGGAGCAGGCTGAGAAGCT
THY01_0038_D06.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
THY01_0207_G09.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
OVR01_0018_F05.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
TES01_0031_C05.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
OVRM1_0107_A02.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
PTG01_0013_E05.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
UTR01_0050_D10.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT
MLN01_0068_E06.b : GGAGAAGCTCCAGGTGGCACTCGAGAAACTCAGAAATAAACAGGAGCAGGCTGAGAAGCT


20110601C-003079 : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
                   ---------+---------+---------+---------+---------+---------+ 684
SKNB1_0080_B05.b : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
ITT01_0066_G08.b : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
OVR01_0063_H08.b : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
OVR01_0034_E11.b : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
PCT01_0023_H09.b : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
THY01_0021_A12.b : GGAAGCGGATGTTGCAACGAAGAGAGCACCCTGGAAGGcaaggggcacgtcctgaagggc
OVRT1_0139_H12.b : GGAAGCGGATGTTGCAACGAATAGAGCACCCTGAAAGGcaaggggcacttcttgcagggc
THY01_0038_D06.b : GGAAGCGGATGTTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
THY01_0207_G09.b : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
OVR01_0018_F05.b : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
TES01_0031_C05.b : GGAAGCGGATATTGCAACGAAAAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
OVRM1_0107_A02.b : GGAAGCGGATGTTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACTAACT
PTG01_0013_E05.b : GGAAGCGGATGTTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
UTR01_0050_D10.b : GGAAGCGGATATTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT
MLN01_0068_E06.b : GGAAGCGGATGTTGCAACGAAGAGAGCAGCCTGGAAGGGGAAGGTTGAGGCCCACAAACT


20110601C-003079 : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
                   ---------+---------+---------+---------+---------+---------+ 744
SKNB1_0080_B05.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
ITT01_0066_G08.b : GAGGATCCACGGAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
OVR01_0063_H08.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
OVR01_0034_E11.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
PCT01_0023_H09.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
THY01_0021_A12.b : actttagatcacaagcctggggagggtccagggtcctggccctaaagagctctgtgcata
OVRT1_0139_H12.b : actttagatcagaagctgggggagggtcaagggtcctggcctaaagagctctgtgcatac
THY01_0038_D06.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
THY01_0207_G09.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
OVR01_0018_F05.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
TES01_0031_C05.b : GAGGATCCTCGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCATAAAAGGATCAAAGGCA
OVRM1_0107_A02.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGA*GCA
PTG01_0013_E05.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
UTR01_0050_D10.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAACTTCCTGGCAGAAGAGGAGCAGAGGCA
MLN01_0068_E06.b : GAGGATCCACGAAGAGTTTGTCCGGCAGAAAAGCTTCCTGGCAGAAGAGGAGCAGAGGCA


20110601C-003079 : GCTGCAG*AAGCTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGCCACAGAAG
                   ---------+---------+---------+---------+---------+---------+ 803
SKNB1_0080_B05.b : GCTGCAG*AAGCTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGNGGGCCACAGAAG
ITT01_0066_G08.b : GCTGCAG*AAGCTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGCCACAGAAG
OVR01_0063_H08.b : GCTGCAG*AAGCTGGAGGAGGAGGAGCGGGAACAGCTGAAAACCCTGGGGGCCACAGAAG
OVR01_0034_E11.b : GCTGCAG*AAGCTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGCCACAGAAG
PCT01_0023_H09.b : GCTGCAN*AAAGTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGGCACAGAAG
THY01_0021_A12.b : gctatgcccgtcaggagactggaagtccccgtgtgtcagtctccaaaaaccaccccgtgc
OVRT1_0139_H12.b : cttgcccgttcagaaactggaaatccccgtgtgtcattctccaaaaacacccctgccctg
THY01_0038_D06.b : GCTGCAG*AAGGTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGCCACAGAAG
THY01_0207_G09.b : GCTGCAG*AAGGTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGCCACAGAAG
OVR01_0018_F05.b : GCTGCAG*AAGCTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGCCACAGAAG
TES01_0031_C05.b : *CTTCAA*AAACTGGAAGATGATGAGCGGGAACAACTGAAAGCCCTGGGGGCCACATAAG
OVRM1_0107_A02.b : GCTGCCG*AAAGTGGAGGAGGAGtaacggaactactgaaagcccttggggtccataaaac
PTG01_0013_E05.b : GCTGCAGAAAAGTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGCCACAGAAG
UTR01_0050_D10.b : GCTGCAG*AAGCTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGGGGGCCACAGAAG
MLN01_0068_E06.b : GCTGCAA*AAGGTGGAGGAGGAGGAGCGGGAACAGCTGAAAGCCCTGNGGGCCACAGAAG


20110601C-003079 : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCAGGAGCTGATCGCAGAGCTGGAGCGGAGG
                   ---------+---------+---------+---------+---------+---------+ 862
SKNB1_0080_B05.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCANGAGCTGATCGCAGAGCTGGAGAGGAGG
ITT01_0066_G08.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCANGAGCTGATCGCAGAGCTGGAGAGGAGG
OVR01_0063_H08.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCAGGAGCTGATCGCAAAGCTGGAAAGGAGG
OVR01_0034_E11.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCAGGAGCTGATCGCAGAGCTGGAGAGGAGG
PCT01_0023_H09.b : CCAGGCTGGCCCAGCAGAGCC*AGNCCCTGCANGAGCTGATCGCANAAGCTGAGCGGAGG
THY01_0021_A12.b : cctgggtctcctggaaaaacggagccggaagcactgtgcccaataaggcggcactccagt
OVRT1_0139_H12.b : ggtctcctgaaagaaaggaacggaaactccggtgcctaaagggggggcctcccgttaaaa
THY01_0038_D06.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCAGGAGCTGATCGCAGAGCTGGAGCGGAGG
THY01_0207_G09.b : CCAGGCTGGCCCAGCAGAGCCCAGGCCCTGCAGGAGCTGATCGCAGAGCTGGAGCGGAGG
OVR01_0018_F05.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCAGGAGCTGATCGCAGAGCTGGAGAGGAGG
TES01_0031_C05.b : CCAGGCTGGCCCAGCAAAACC*AGGCCCTGCAGGATCTGATCGCAAAACTGGgaaggaag
OVRM1_0107_A02.b : ctagctggcctacacaacccaggcctgcaagacctgatcncagagctg           
PTG01_0013_E05.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCAAGAGCTGATCGCAGAGCTGGAGCGGAAG
UTR01_0050_D10.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCAGGAGCTGATCGCAAAGCTGGAGAGGAGG
MLN01_0068_E06.b : CCAGGCTGGCCCAGCAGAGCC*AGGCCCTGCAGGAGCTGATCGCAAAGCTGGAGCGAANG


20110601C-003079 : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGTGAGGCCTGAGGACAGCCCCCCCC*CCAC
                   ---------+---------+---------+---------+---------+---------+ 921
SKNB1_0080_B05.b : AGTCGGGGTCCCATGCTGGAGCTGCTACAGGTGAAGCCTGANGA*CAGCCCCCCC*CCAC
ITT01_0066_G08.b : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGTGAGGCCTGANGA*CAGCCCCCCC*Ccac
OVR01_0063_H08.b : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGTGAGGGCTGAGGA*CAGCCCCCCC*CCca
OVR01_0034_E11.b : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGTGAGGGCTGAGGAACAGCCCCCCC*CCCC
PCT01_0023_H09.b : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGaagtgaagaatgtcctggaaaagagtgag
THY01_0021_A12.b : cagacccaaaaacagggcgtccttggggatatgctccggtaaaaacagaacccaaactcc
OVRT1_0139_H12.b : accaaagaaagggggcctggggggaaatgccccggggaaaaaaggcaccccaagacctct
THY01_0038_D06.b : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGTGAGGCCTGAGGACAGCCCCCCCCTCCAC
THY01_0207_G09.b : AGCCGGGGCCCCATGCTGGAGCTGCTAAAGGAGGTGAAGAGTGTCCTGGAAAGGAGTGAG
OVR01_0018_F05.b : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGTGAGGCCTGAGGACAGCCCCCCCC**CAC
TES01_0031_C05.b : atttcggggccccatgctgggaattgctaaatgtgaaggcctgaggaaaccccccccccc
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGTGAAGCCTGAGGACAGCCCCCCCCTCCAC
UTR01_0050_D10.b : AGTCGGGGCCCCATGCTGGAACTGCTACAGGTGAGGCCTGAGGACAGCCCCCCCC*CCAC
MLN01_0068_E06.b : AGTCGGGGCCCCATGCTGGAGCTGCTACAGGTGAGGCCTGAGGACAGCCCCCCCCTCCAC


20110601C-003079 : CCCGAGAGTCAAGGAGAAGTTGAAAAAAGCCAGAGGGAGCGCCCCTT*GTGGCTCAGTGG
                   ---------+---------+---------+---------+---------+---------+ 980
SKNB1_0080_B05.b : CCCGAGAGTCCAGGAGAAGTTGACAAAAGCCgagggagcgccccttgtggctcagtgggg
ITT01_0066_G08.b : ccgagagtcaggagaagttgaaaaagccagagggagcgcccttgtggctcagtgggtaan
OVR01_0063_H08.b : cccgagagtcaaggagaagtttgaaaaaaccaaagggagcgcccctggggcctcaggggg
OVR01_0034_E11.b : CCCGAGAGTCAAAGAGAAATTAAAAAAACCCAGAGGGAACGCCCCcttggggctcaatgg
PCT01_0023_H09.b : tcttggaaccctgaagagctgaacatcggcttcccagaactgagcagcttgggcttagtg
THY01_0021_A12.b : tttttctcgaacccggtctaggcgataaccacaaagn                      
OVRT1_0139_H12.b : attcggggaacccggcctcagggaaaaaaaaaccgggccctggtttggcacccaagaacc
THY01_0038_D06.b : CCCGAGAGTCAAGGAGAAGTTGAAAAAAGCCAGAGGGAGCTCCCCTT*GTGGCTCAGTGG
THY01_0207_G09.b : TCTTtggaacctgaaggagcttaacatccgcttccccaacctgaacaccttgtgctatgt
OVR01_0018_F05.b : CCCGAGAGTCAAGGAGAAAGTGAAAAAAAGCAGAGggagcgccccttgtggctcagtggg
TES01_0031_C05.b : ccccgagagttaaggaaaaatttaaaaaaagccaaaaggaagcgccccttgtggctcctt
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : CCCGAGAGTCAAGGAGAAGTTGAAAAAAGCCAgaagaagctccccctggtgctcagtggg
UTR01_0050_D10.b : CCCGAGAGTCAAGGAGAAGTTGAAAAAAGCCAAAGGGAGCGCCCCTTTGTGCTTCATTGG
MLN01_0068_E06.b : CCCGAGAGTCAAGGAGAAAGTTGAAAAAGCCAGAGGGAGCtcccttggtgctcaatgggg


20110601C-003079 : GTTAAGGACCAAACACACAGTGTCCGTGGAGGGTGCAAGTTCGGGGTTCCCTTCCTGGCC
                   ---------+---------+---------+---------+---------+---------+ 1040
SKNB1_0080_B05.b : taaggaccagacacacagtgtccgtgagggtgcaggttcggggtcactcctggcctcact
ITT01_0066_G08.b : ggaccagaacacagtgtccgtgagggtgcaagttcgggttcattcctggcctcactgntg
OVR01_0063_H08.b : ttaaggaacaaaaccccatggtcccttagggtgcagggttcggggtcacttcctggcccc
OVR01_0034_E11.b : gtttaaggacccaaacccacagtggcccgtgaagggggcaggttccgggttccctttctg
PCT01_0023_H09.b : cctgggataagaagatgctgaggtcaatgcagggccatcactctggacccctgacggcag
THY01_0021_A12.b :                                                             
OVRT1_0139_H12.b : cctgaaaagaatgccggggggcccgcctgttaggaattaaagggccccagggaaaaatat
THY01_0038_D06.b : GTTAAGGACCAGACACACAGTGTCCGTGagggtgcagggtcggggtcactttcctggcct
THY01_0207_G09.b : gcccgggataaaaaggatgctgaagtcaaatgcagtgcacatcctcctggaccccctaac
OVR01_0018_F05.b : ttaaggaccagacacacagtgtccgtgagggtgcagggtcgggttcacttcctggnctca
TES01_0031_C05.b : gggttaaggaccaaaaaaccacgggcccttaagaggtgcaggttcgggttcacttcctgg
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : taaagaacaaacacacttgtccgtgaggtgcaggttcgggtcacttcctggctcactcgt
UTR01_0050_D10.b : GTTAAGGACCAAACACACAATGTCCGTGGAGGGTGCAAGTTCGGGGTTCCCTTCCTGGCC
MLN01_0068_E06.b : taagggacagaccacagtgtccgtgaaggtgcaggttcgggntcacttcctggctccctc


20110601C-003079 : CTCACTTGGTGGAATTAAGGATCCAAAACTGCCTGCCCCCTGGCAGTGGAGGTTGGCAAA
                   ---------+---------+---------+---------+---------+---------+ 1100
SKNB1_0080_B05.b : ggggaattaagatcccgacctgctgcccgcgccactgtagttgcacatgcancccgaatc
ITT01_0066_G08.b : gataangatccgaactgctgcccctgcantgttagtgcaaatgcactcggatctgtgttg
OVR01_0063_H08.b : cccttggtgggattaggaatccaaaacctgtctgcccccttcaatgttaggttgccaaaa
OVR01_0034_E11.b : ggcctccccttggggggaataagggatcccgagcctggttgcccgccttgcaggggaagg
PCT01_0023_H09.b : tcctggctcgtcttttcaaaatcggcaacaatgaggctgaaaaacccgccagaatgccca
THY01_0021_A12.b :                                                             
OVRT1_0139_H12.b : aggggcccattgggccggaggaaggaaaaccccctcgcaggggttttctaaacggaggct
THY01_0038_D06.b : cactccgtgggttaagaatccaaaactgctgcgccgctgcaatggaaggttgcaaaatgc
THY01_0207_G09.b : ggccaatccgtggctcctccttttcaaaaaatggccaaaaagtaaagcttggaaaaaacc
OVR01_0018_F05.b : cttggtggattaaggatccagagctgctgcgcgctgcagtgtaggttgcagatgcagctc
TES01_0031_C05.b : ccccccttgttggaataaaagaatcaaaaatgctgtcccccttcactgaaagttgctaaa
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : ggcttaagatccaaactgctgcccctgcaatgaagttccaaagcaactccaatctgggtt
UTR01_0050_D10.b : CTCACTTGGTGGAATTAAGGATCCAAAACTGCCTGCCCCCTGGCAGTGGAGGTTGGCAAA
MLN01_0068_E06.b : ggtggctttaagatcaaacctgctgcccgctgcatgnaggttgcaaatgcactcggatcg


20110601C-003079 : AGCCACCCCGGAATTTGGGGGTTGCCCGGGGCTGTGGCCCAAAGCCCTCCAACCGCACCC
                   ---------+---------+---------+---------+---------+---------+ 1160
SKNB1_0080_B05.b : tggggtggccgggctgtggcctagccccagccacagctccaatttaccctagcccgggaa
ITT01_0066_G08.b : cagggctgtggctagcctcagcacactccgatggaccctagctgggactcataatagcag
OVR01_0063_H08.b : accccctccgaaatctggggtttgcccgggcctgggtgcccataggcccc         
OVR01_0034_E11.b : gttggaaaaagccactttcggaatttgggggggtttcccccagggctttgggggccccta
PCT01_0023_H09.b : aacgagaaaaatggaaactacccccggtctgggggccacactcaacctggaaactactga
THY01_0021_A12.b :                                                             
OVRT1_0139_H12.b : ttcctgagaaagggtgtcgagagaatttgtttgttctccccagtgttgagcccagtgggg
THY01_0038_D06.b : acttcggaatctggggtttccaagggcttgggaacctaagccctcccccagcagccttca
THY01_0207_G09.b : ccggcaggaaattgccctaaaaacaaccaaaaaaatttaaaacccacccccagggcccct
OVR01_0018_F05.b : cggatctggtgttggccagggctggggcctaagcccttaccaacaagctcaaaatttaac
TES01_0031_C05.b : accccctctaatcgtaggtgttccggggtgtgtgcctaagaccttcctaaatacccctaa
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : ccaggctgtgcctangctaacaccacccaattgaccctagctgggaattcctagcccaaa
UTR01_0050_D10.b : AGCCACCCCGGAATTTGGGGGTTGCCCGGGGCTGTGGCCCAAAGCCCTCCAACCGCACCC
MLN01_0068_E06.b : gtgttgcagggctgggactaggcctccacacagcccaattgaccctaacctgggacttcc


20110601C-003079 : TTAAAAATTTACCCCCCCAACCCTGGGAAAATTTCCCAATAGGGAAACAAGGGGCGGGCC
                   ---------+---------+---------+---------+---------+---------+ 1220
SKNB1_0080_B05.b : ctccttggtaagcggggcggccaaaaaaaaaaaaaaaaaaaagagccctgttcctccctc
ITT01_0066_G08.b : ggccgcataaaaaaaaaaaaaaaaaaggcaatggctaaatgcggtcggccctcaaattcc
OVR01_0063_H08.b :                                                             
OVR01_0034_E11.b : ggcc                                                       
PCT01_0023_H09.b : aggggatttcccccaggaagcctgacccggttgggttaaaccctaaagaaaggaattttt
THY01_0021_A12.b :                                                             
OVRT1_0139_H12.b : gagaaaaacaccatgtagaacatcttgtacccggggggtgtataaacgccgggggaaaaa
THY01_0038_D06.b : aaatttgaacccccaaaccccgggggaaattttcccatagggcaaacaaaaagggggggc
THY01_0207_G09.b : ggggggccccacccctcttccaccttcggggaaaaaaattttactgggggaaggggggaa
OVR01_0018_F05.b : ccctagccctggggaaacttccataagggaaaccagggggcggccccaaagaaaaaaaaa
TES01_0031_C05.b : ttttaccccctaccccgggaactttcattagtatcagggtgggtcctctaaaaaataatt
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : agggccaataaaaaaaaaaaagccacttgtccaactgggccggccccctaaaaccctagg
UTR01_0050_D10.b : TTAAAAATTTACCCCCCCAACCCTGGGAAAATTTCCCAATAGGGAAACAAGGGGCGGGCC
MLN01_0068_E06.b : taagcgcaaaggcgccattaaaaaaaaaaaaaaaaaaaaggcccatgggcaacctcaggc


20110601C-003079 : AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................
                   ---------+---------+---------+---------+---------+---------+ 1257
SKNB1_0080_B05.b : ccgc                                                       
ITT01_0066_G08.b : tcggggccagctaaccaccccttttggaaagggccctaaggatcataaccaagccggccc
OVR01_0063_H08.b :                                                             
OVR01_0034_E11.b :                                                             
PCT01_0023_H09.b : tccaccccaaagggtttgaacttgggtggaaaaaaaaataaggggggccggccaaaccct
THY01_0021_A12.b :                                                             
OVRT1_0139_H12.b : aaaaccacatgatctttccctctcggggggctgaaaaaggagaaaaattccgcccttttc
THY01_0038_D06.b : cccaaaataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggccccaccc
THY01_0207_G09.b : attgg                                                      
OVR01_0018_F05.b : aaaaaaaaaaaaaaaaaaaaaaggggcccaaattgttgggccctcccaaaaccttttgca
TES01_0031_C05.b : aaaataaaatatagggccctcgtgtgcctcaaacgcaggtacggggcccccaaatttctc
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : gccaaatatcaaccattttttaaaagggcccaaggagcatataacaggcgggccctttaa
UTR01_0050_D10.b : AATaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggcgccccactgttgc      
MLN01_0068_E06.b : cggcccctaaaatccccagggccagattacgaccattttttaaagggccccaagagacat


20110601C-003079 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1257
SKNB1_0080_B05.b :                                                             
ITT01_0066_G08.b : ttttaccctgccggaaattctttggattttaagaacttctgggggaattggacccccaaa
OVR01_0063_H08.b :                                                             
OVR01_0034_E11.b :                                                             
PCT01_0023_H09.b : tccttgggtccaaagttgtgtttttaaaaaaaaacctccctttaaaaaaaaagcccctcc
THY01_0021_A12.b :                                                             
OVRT1_0139_H12.b : cacggtggggagaaaagataac                                     
THY01_0038_D06.b : aatttttgggtcccttcc                                         
THY01_0207_G09.b :                                                             
OVR01_0018_F05.b : ggggggtccccggggggcccccct                                   
TES01_0031_C05.b : tcagaaaaaactcccctccttcccctaggaatggaaataaaataagaggactagtgtgta
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : caccgggggaaccttttggttttaaacattcttggggaaattaaaccccaattaccggaa
UTR01_0050_D10.b :                                                             
MLN01_0068_E06.b : tacaggcgggggctttaacccgcgggaaactcctgatttgagaaatttcgggag     


20110601C-003079 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1257
SKNB1_0080_B05.b :                                                             
ITT01_0066_G08.b : taccctggaaaaatttgtgtgttcaccccccgcccgatttctcaaataaaaacggccgct
OVR01_0063_H08.b :                                                             
OVR01_0034_E11.b :                                                             
PCT01_0023_H09.b : atttaaaaactcgggcgcgcctcttcttttttggaaaaaccccccctcttgggggggaaa
THY01_0021_A12.b :                                                             
OVRT1_0139_H12.b :                                                             
THY01_0038_D06.b :                                                             
THY01_0207_G09.b :                                                             
OVR01_0018_F05.b :                                                             
TES01_0031_C05.b : taactctatatacacccatatagggtccaaataaaaaaaactccccaatttcctataaaa
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : aaattttgagggaaccccccgcgggttttcaaataaaaacacaactctttttaacccgtt
UTR01_0050_D10.b :                                                             
MLN01_0068_E06.b :                                                             


20110601C-003079 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1257
SKNB1_0080_B05.b :                                                             
ITT01_0066_G08.b : ttgttttaacccgtgcccccccgtataaaatgt                          
OVR01_0063_H08.b :                                                             
OVR01_0034_E11.b :                                                             
PCT01_0023_H09.b : aggaggtttttccccaaatttttgcaccccagataaaaaag                  
THY01_0021_A12.b :                                                             
OVRT1_0139_H12.b :                                                             
THY01_0038_D06.b :                                                             
THY01_0207_G09.b :                                                             
OVR01_0018_F05.b :                                                             
TES01_0031_C05.b : atatttttctcgcttctctattgggtggtacacattcctaaatctttt           
OVRM1_0107_A02.b :                                                             
PTG01_0013_E05.b : ccccccttttacctttttcccccccaaagnttttaaaaaatttttttcagaccatcct 
UTR01_0050_D10.b :                                                             
MLN01_0068_E06.b :