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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-003243

Length: 1,382

Sequence [FASTA format sequence]
TCTTTTTGCG ACTCCTCCGA GCGCTTCGAG TCCGAGGCGG AGGCCGCCAT GGCGCTGCGA
GCAGCGGTGT TCGACCTGGA CGGGGTCCTG GCACTGCCAT CGATCACCAC CTCCTGGGCC
CGCGCCGAGG AGAAGCTGGC GCTGCCCAGA GGTTTTCTGA ATGAAGCTTT CAAGAAAGGA
GGCCAGGATG GCTCCGTTGC TCGCGTGATG ACGGGAGAGA TCACGTTTTC GCAGTGGGTG
CCCTTCATGG AAGAAGACTG CAGGAAGTGT GCTGAGGACT CGGGAATACG CCTGTCTGAG
AATTTCTCCG TAAAGCACAT CTTTGACAAG GCGCTTTCAG AGAAAAAGAT CAACTACCCC
ATGCTGCAGG CCGCTCTCAC TCTCAAAAAG AAGGGATTTT CAACCTGCAT CCTCACCAAC
AACTGGCTGG ATGACAGCGC CCAGAGAGGC AGCCGGGCCC AGTTGATGTG TGAGCTCAGA
CCACACTTCG ACTTCCTGAT TGAGTCATGC AGGGTCGGAA TGGCCAAGCC TGACCCTCAG
ATCTACAAGC TCATGCTGGA CACCTTGAAG GCCGAACCCA ACGAGGTTGT TTTCCTGGAT
GATGTCGGGA CTCATCTGAA GCCAGTCCGT GACCTGGGCA TGGCCACCAT TCTCGTCCGC
GACACTGACA CGGCCCTGAG GGAGCTGGAG AAAGTGACTG GAGTGCAGCT TCTCCAAACT
CCAGCCCTTC CTCCCACCTC CTGCGATCCG AGCGCCCTGA GCCACGGGTA CGTGCTCATC
AAGCCTGGGG TACGTCTGCA TTTTGTGGAG ATGGGCTCCG GCCCTGCTGT GTGCCTCTGC
CATGGATTTC CTGAGAGCTG GTTCTCTTGG AGGTACCAGA TCCCTGCCCT GGCCCAGGCG
GGCTTCCGGG TGCTGGCTGT GGACATGAAA GGCTATGGAG AGTCATCTGC TCCTCCCGAA
ATAGAAGAAT ATTCCTTGGA AGTGTTATGC AAGGACATGG TGACCTTCCT GAATAAGTTG
GGCCTCTCTC AAGCCGTGTT CATTGGCCAC GACTGGGGAA GCGTGCTGGT GTGGAACATG
GCTCTCTTCT ACCCTGAGAG AGTGAGGGCG GTGGCCAGTC TGAATACTCC CTTCATGCCA
TCAAATCCCA ATGTGTCCCC CATGGAGATC ATCAAAGCCA ATCCTGTCTT TGATTACCAG
CTCTACTTCA AAGAGCCGGG AGTGGCGGAA GCTGAACTGG AACAGAACCT GGATCGGACT
TTCAAAACTT CTTCAGAGCA CATGATGAGA CTTTTCTCAC ACCGAACAAA ACCGTGAATT
GGGAAGACTT TTTTGTGGGA CCCCAGAGGA ACCCGCCTCA GCAGGCTATT CACCGAGGAG
GA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinEPHX2epoxide hydrolase 2 [Homo sapiens]. 6570.0O
Contig/Assembly ProteinEPHX4epoxide hydrolase 4 [Homo sapiens]. 1242e-28O
Contig/Assembly ProteinEPHX3epoxide hydrolase 3 precursor [Homo sapiens]. 1211e-27O
Contig/Assembly ProteinEPHX3epoxide hydrolase 3 precursor [Homo sapiens]. 1211e-27O
Contig/Assembly ProteinACAD10acyl-CoA dehydrogenase family member 10 isoform b [Homo sapiens]. 1195e-27
Contig/Assembly ProteinACAD10acyl-CoA dehydrogenase family member 10 isoform a [Homo sapiens]. 1034e-22
Contig/Assembly ProteinABHD8abhydrolase domain-containing protein 8 [Homo sapiens]. 56.65e-08O
Contig/Assembly ProteinABHD11abhydrolase domain-containing protein 11 isoform 2 [Homo sapiens]. 50.44e-06O
Contig/Assembly ProteinABHD11abhydrolase domain-containing protein 11 isoform 1 [Homo sapiens]. 50.44e-06O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinEphx2epoxide hydrolase 2 [Mus musculus]. 596e-170O
Contig/Assembly ProteinEphx4epoxide hydrolase 4 [Mus musculus]. 1211e-27O
Contig/Assembly ProteinEphx3epoxide hydrolase 3 [Mus musculus]. 1173e-26O
Contig/Assembly ProteinAcad10acyl-CoA dehydrogenase family member 10 [Mus musculus]. 1134e-25
Contig/Assembly ProteinAbhd8abhydrolase domain-containing protein 8 [Mus musculus]. 56.64e-08O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC477373PREDICTED: similar to epoxide hydrolase 2, cytoplasmic isoform 1 [Canis familiaris]. 6570.0O
Contig/Assembly ProteinLOC477373PREDICTED: similar to epoxide hydrolase 2, cytoplasmic isoform 3 [Canis familiaris]. 6570.0O
Contig/Assembly ProteinLOC477373PREDICTED: similar to epoxide hydrolase 2, cytoplasmic isoform 2 [Canis familiaris]. 6470.0O
Contig/Assembly ProteinLOC477373PREDICTED: similar to epoxide hydrolase 2, cytoplasmic isoform 4 [Canis familiaris]. 6440.0O
Contig/Assembly ProteinLOC490160PREDICTED: similar to abhydrolase domain containing 7 [Canis familiaris]. 1134e-25O
Contig/Assembly ProteinLOC486272PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member 10 [Canis familiaris]. 1082e-23
Contig/Assembly ProteinLOC610434PREDICTED: similar to abhydrolase domain containing 9 [Canis familiaris]. 87.82e-17
Contig/Assembly ProteinLOC484840PREDICTED: similar to abhydrolase domain containing 8 [Canis familiaris]. 56.65e-08O
Contig/Assembly ProteinLOC489803PREDICTED: similar to abhydrolase domain containing 11 isoform 2 isoform 3 [Canis familiaris]. 52.41e-06O
Contig/Assembly ProteinLOC489803PREDICTED: similar to abhydrolase domain containing 11 isoform 1 isoform 1 [Canis familiaris]. 52.41e-06O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinEPHX2epoxide hydrolase 2 [Bos taurus]. 6600.0O
Contig/Assembly ProteinEPHX4abhydrolase domain containing 7 [Bos taurus]. 1242e-28O
Contig/Assembly ProteinEPHX3epoxide hydrolase 3 [Bos taurus]. 1242e-28O
Contig/Assembly ProteinEPHX3PREDICTED: epoxide hydrolase 3 [Bos taurus]. 1242e-28O
Contig/Assembly ProteinACAD10acyl-CoA dehydrogenase family member 10 [Bos taurus]. 1143e-25
Contig/Assembly ProteinACAD10PREDICTED: acyl-Coenzyme A dehydrogenase family, member 10 [Bos taurus]. 1143e-25
Contig/Assembly ProteinLOC513508PREDICTED: acyl-Coenzyme A dehydrogenase family, member 10-like [Bos taurus]. 1104e-24
Contig/Assembly ProteinLOC513508PREDICTED: acyl-Coenzyme A dehydrogenase family, member 10 [Bos taurus]. 1104e-24
Contig/Assembly ProteinABHD8abhydrolase domain-containing protein 8 [Bos taurus]. 56.65e-08O
Contig/Assembly ProteinABHD11abhydrolase domain-containing protein 11 [Bos taurus]. 55.51e-07O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinEPHX2epoxide hydrolase 2 [Sus scrofa]. 8180.0O
Contig/Assembly ProteinLOC100625866PREDICTED: epoxide hydrolase 3-like [Sus scrofa]. 1293e-30O
Contig/Assembly ProteinLOC100625244PREDICTED: acyl-CoA dehydrogenase family member 10-like, partial [Sus scrofa]. 996e-21


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
BFLT10099H05BFLT1_0099_H05.bFS647938 
KDN010028A11KDN01_0028_A11.bFS673288 
LVR010034F08LVR01_0034_F08.bBP445962 AK232378
OVRT10129D09OVRT1_0129_D09.bHX237140 
PST010024H08PST01_0024_H08.bFS698915 
PTG010011D11PTG01_0011_D11.bFS705373 
PTG010044D07PTG01_0044_D07.bFS708292 
TCH010077B06TCH01_0077_B06.bCJ027972 AK399344

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
295C300.500WNCCT/P
T300.500TCT/S
341A300.500WNGAG/E
C300.500GCG/A
372C400.571WSGCC/A
T300.429GCT/A


Alignment:      TOP

20110601C-003243 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
TCH01_0077_B06.b : nnnnggctaggaataagacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PTG01_0011_D11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
OVRT1_0129_D09.b : nnnccgattcnnnnnnnnccgttagcgcacgxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0099_H05.b : gactacgtttgcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0034_F08.b : gcaatttggggactaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0028_A11.b :
PTG01_0044_D07.b :
PST01_0024_H08.b :
20110601C-003243 : ................TCTTTTTGCGACTCCTCCGAGCGCTTCGAGTCCGAGGCGGAGGC
---------+---------+---------+---------+---------+---------+ 44
TCH01_0077_B06.b : xxxxxxxxxxxxxxxxTCTTTTTGCGACTCCTCCGAGCGCTTCGAGTCCGAGGCGGAGGC
PTG01_0011_D11.b : nnnnxxxxxxxxxxxxxxxxxxxxxGACTCCTCCGAGCGCTTCGAGTCCGAGGCGGAGGC
OVRT1_0129_D09.b : xxxxxxxxxxxxxxxxxxxxxctggGACTCCTCCGAGCGCTTCGAGTCCGAGGCGGAGGC
BFLT1_0099_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxTCCTCCGAGCGCTTCGAGTCCGAGGCGGAGGC
LVR01_0034_F08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAGCGCTTCGAGTCCGAGGCGGAGGC
KDN01_0028_A11.b : nnaactgctgtggctctggatcctCGAGCGCTTCGAGTCCGAGGCGGAGGC
PTG01_0044_D07.b :
PST01_0024_H08.b :
20110601C-003243 : CGCCATGGCGCTGCGAGCAGCGGTGTTCGACCTGGACGGGGTCCTGGCACTGCCATCGAT
---------+---------+---------+---------+---------+---------+ 104
TCH01_0077_B06.b : CGCCATGGCGCTGCGAGCAGCGGTGTTCGACCTGGACGGGGTCCTGGCACTGCCATCGAT
PTG01_0011_D11.b : CGCCATGGCGCTGCGAGCAGCGGTGTTCGACCTGGACGGGGTCCTGGCACTGCCATCGAT
OVRT1_0129_D09.b : CGCCATGGCGCTGCGAGCAGCGGTGTTCGACCTGGACGGGGTCCTGGCACTGCCATCGAT
BFLT1_0099_H05.b : CGCCTTGGCGCTGCGAGCAGCGGTGTTCGACCTGGACGGGGTCCTGGCACTGCCATCGAT
LVR01_0034_F08.b : CGCCATGGCGCTGCGAGCAGCGGTGTTCGACCTGGACGGGGTCCTGGCACTGCCATCGAT
KDN01_0028_A11.b : CGCCATGGCGCTGCGAGCAGCGGTGTTCGACCTGGACGGGGTCCTGGCACTGCCATCGAT
PTG01_0044_D07.b :
PST01_0024_H08.b :
20110601C-003243 : CACCACCTCCTGGGCCCGCGCCGAGGAGAAGCTGGCGCTGCCCAGAGGTTTTCTGAATGA
---------+---------+---------+---------+---------+---------+ 164
TCH01_0077_B06.b : CACCACCTCCTGGGCCCGCGCCGAGGAGAAGCTGGCGCTGCCCAGAGGTTTTCTGAATGA
PTG01_0011_D11.b : CACCACCTCCTGGGCCCGCGCCGAGGAGAAGCTGGCGCTGCCCAGAGGTTTTCTGAATGA
OVRT1_0129_D09.b : CACCACCTCCTGGGCCCGCGCCGAGGAGAAGCTGGCGCTGCCCAGAGGTTTTCTGAATGA
BFLT1_0099_H05.b : CACCACCTCCTGGGCCCGCGCCGAGGAGAAGCTGGCGCTGCCCAGAGGTTTTCTGAATGA
LVR01_0034_F08.b : CACCACCTCCTGGGCCCGCGCCGAGGAGAAGCTGGCGCTGCCCAGAGGTTTTCTGAATGA
KDN01_0028_A11.b : CACCACCTCCTGGGCCCGCGCCGAGGAGAAGCTGGCGCTGCCCAGAGGTTTTCTGAATGA
PTG01_0044_D07.b :
PST01_0024_H08.b :
20110601C-003243 : AGCTTTCAAGAAAGGAGGCCAGGATGGCTCCGTTGCTCGCGTGATGACGGGAGAGATCAC
---------+---------+---------+---------+---------+---------+ 224
TCH01_0077_B06.b : AGCTTTCAAGAAAGGAGGCCAGGATGGCTCCGTTGCTCGCGTGATGACGGGAGAGATCAC
PTG01_0011_D11.b : AGCTTTCAAGAAAGGAGGCCAGGATGGCTCCGTTGCTCGCGTGATGACGGGAGAGATCAC
OVRT1_0129_D09.b : AGCTTTCAAGAAAGGAGGCCAGGATGGCTCCGTTGCTCGCGTGATGACGGGAGAGATCAC
BFLT1_0099_H05.b : AGCTTTCAAGAAAGGAGGCCAGGATGGCTCCGTTGCTCGCGTGATGACGGGAGAGATCAC
LVR01_0034_F08.b : AGCTTTCAAGAAAGGAGGCCAGGATGGCTCCGTTGCTCGCGTGATGACGGGAGAGATCAC
KDN01_0028_A11.b : AGCTTTCAAGAAAGGAGGCCAGGATGGCTCCGTTGCTCGCGTGATGACGGGAGAGATCAC
PTG01_0044_D07.b :
PST01_0024_H08.b :
20110601C-003243 : GTTTTCGCAGTGGGTGCCCTTCATGGAAGAAGACTGCAGGAAGTGTGCTGAGGACTCGGG
---------+---------+---------+---------+---------+---------+ 284
TCH01_0077_B06.b : GTTTTCGCAGTGGGTGCCCTTCATGGAAGAAGACTGCAGGAAGTGTGCTGAGGACTCGGG
PTG01_0011_D11.b : GTTTTCGCAGTGGGTGCCCTTCATGGAAGAAGACTGCAGGAAGTGTGCTGAGGACTCGGG
OVRT1_0129_D09.b : GTTTTCGCAGTGGGTGCCCTTCATGGAAGAAGACTGCAGGAAGTGTGCTGAGGACTCGGG
BFLT1_0099_H05.b : GTTTTCGCAGTGGGTGCCCTTCATGGAAGAAGACTGCAGGAAGTGTGCTGAGGACTCGGG
LVR01_0034_F08.b : GTTTTCGCAGTGGGTGCCCTTCATGGAAGAAGACTGCAGGAAGTGTGCTGAGGACTCGGG
KDN01_0028_A11.b : GTTTTCGCAGTGGGTGCCCTTCATGGAAGAAGACTGCAGGAAGTGTGCTGAGGACTCGGG
PTG01_0044_D07.b : nggaacatnnnnggagtaagcagcggnaxxxxxx
PST01_0024_H08.b :
20110601C-003243 : AATACGCCTGTCTGAGAATTTCTCCGTAAAGCACATCTTTGACAAGG*CGCTTTCAGAGA
---------+---------+---------+---------+---------+---------+ 343
TCH01_0077_B06.b : AATACGCCTGTCTGAGAATTTCTCCGTAAAGCACATCTTTGACAAGG*CGCTTTCAGAGA
PTG01_0011_D11.b : AATACGCCTGTCTGAGAATTTCTCCGTAAAGCACATCTTTGACAAGG*CGCTTTCAGAGA
OVRT1_0129_D09.b : AATACGCCTGCCTGAGAATTTCTCCGTAAAGCACATCTTTGACAAGG*CGCTTTCAGCGA
BFLT1_0099_H05.b : AATACGCCTGCCTGAGAATTTCTCCGTAAAGCACATCTTTGACAAGG*CGCTTTCAGCGA
LVR01_0034_F08.b : AATACGCCTGTCTGAGAATTTCTCCGTAAAGCACATCTTTGACAAGG*CGCTTTCAGAGA
KDN01_0028_A11.b : AATACGCCTGCCTGAGAATTTCTCCGTAAAGCACATCTTTGACAAGG*CGCTTTCAGCGA
PTG01_0044_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCACATCTTTGACAAGGGCGCTTTCAGAGA
PST01_0024_H08.b : nttcgctgttgctctggtttgaaggcgctttcgag
20110601C-003243 : AAAAGATCAACTACCCCATGCTGCAGGCCGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
---------+---------+---------+---------+---------+---------+ 403
TCH01_0077_B06.b : AAAAGATCAACTACCCCATGCTGCAGGCCGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
PTG01_0011_D11.b : AAAAGATCAACTACCCCATGCTGCAGGCCGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
OVRT1_0129_D09.b : AAAAGATCAACTACCCCATGCTGCAGGCTGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
BFLT1_0099_H05.b : AAAAGATCAACTACCCCATGCTGCAGGCTGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
LVR01_0034_F08.b : AAAAGATCAACTACCCCATGCTGCAGGCCGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
KDN01_0028_A11.b : AAAAGATCAACTACCCCATGCTGCAGGCTGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
PTG01_0044_D07.b : AAAAGATCAACTACCCCATGCTGCAGGCCGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
PST01_0024_H08.b : AAAAGATCAACTACCCCATGCTGCAGGCCGCTCTCACTCTCAAAAAGAAGGGATTTTCAA
20110601C-003243 : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
---------+---------+---------+---------+---------+---------+ 463
TCH01_0077_B06.b : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
PTG01_0011_D11.b : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
OVRT1_0129_D09.b : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
BFLT1_0099_H05.b : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
LVR01_0034_F08.b : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
KDN01_0028_A11.b : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
PTG01_0044_D07.b : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
PST01_0024_H08.b : CCTGCATCCTCACCAACAACTGGCTGGATGACAGCGCCCAGAGAGGCAGCCGGGCCCAGT
20110601C-003243 : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
---------+---------+---------+---------+---------+---------+ 523
TCH01_0077_B06.b : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
PTG01_0011_D11.b : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
OVRT1_0129_D09.b : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
BFLT1_0099_H05.b : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
LVR01_0034_F08.b : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
KDN01_0028_A11.b : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
PTG01_0044_D07.b : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
PST01_0024_H08.b : TGATGTGTGAGCTCAGACCACACTTCGACTTCCTGATTGAGTCATGCAGGGTCGGAATGG
20110601C-003243 : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
---------+---------+---------+---------+---------+---------+ 583
TCH01_0077_B06.b : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
PTG01_0011_D11.b : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
OVRT1_0129_D09.b : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
BFLT1_0099_H05.b : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
LVR01_0034_F08.b : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
KDN01_0028_A11.b : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
PTG01_0044_D07.b : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
PST01_0024_H08.b : CCAAGCCTGACCCTCAGATCTACAAGCTCATGCTGGACACCTTGAAGGCCGAACCCAACG
20110601C-003243 : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCGTGACCTGGGCATGG
---------+---------+---------+---------+---------+---------+ 643
TCH01_0077_B06.b : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCGTGACCTGGGCATGG
PTG01_0011_D11.b : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCGTGACCTGGGCATGG
OVRT1_0129_D09.b : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCGTGACCTGNGCATGG
BFLT1_0099_H05.b : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCGTGACCTGGGCATGG
LVR01_0034_F08.b : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCGTGACCTGGGCATGG
KDN01_0028_A11.b : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCATGACCTGGGCATGG
PTG01_0044_D07.b : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCGTGACCTGGGCATGG
PST01_0024_H08.b : AGGTTGTTTTCCTGGATGATGTCGGGACTCATCTGAAGCCAGTCCGTGACCTGGGCATGG
20110601C-003243 : CCACCATTCTCGTCCGCGACACTGACACGGCCC*TGAGGGAGCTGGAGAAAGTGACTGGA
---------+---------+---------+---------+---------+---------+ 702
TCH01_0077_B06.b : CCACCATTCTCGTCCGCGACACTGACACGGCCC*TGAGGGAGCTGGAGAAAGTGACTGGA
PTG01_0011_D11.b : CCACCATTCTCGTCCGCGACACTGACACGGCCC*TGAGGGAGCTGGAGAAAGTGACTGGA
OVRT1_0129_D09.b : CCACCATTCTCGTCCGCGACACTGACACGGCCC*TGAGGGAGCTGGAGAAAGTGACTGGA
BFLT1_0099_H05.b : CCACCATTCTCGTCCGCGACACTGACACGGCCC*TGAGGGAGCTGGAGAAAGTGACTGGA
LVR01_0034_F08.b : CCACCATTCTCGTCCGCGACACTGACACGGCCCCTGAGGGAGCTGGAGAAAGTGACTGGA
KDN01_0028_A11.b : CCACCATTCTCGTCCGCGACACTGACACGGCCC*TGAGGGAGCTGGAGAAAGTGACTGGA
PTG01_0044_D07.b : CCACCATTCTCGTCCGCGACACTGACACGGCCC*TGAGGGAGCTGGAGAAAGTGACTGGA
PST01_0024_H08.b : CCACCATCCTCGTCCACGACACTGACACGGCCC*TGAGGGAGCTGGAGAAAGTGACTGGA
20110601C-003243 : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCCCACCTCCTGCGATCCGAGCGCCCTGAGC
---------+---------+---------+---------+---------+---------+ 762
TCH01_0077_B06.b : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCCCACCTCCTGCGATCCGAGCGCCCTGAGC
PTG01_0011_D11.b : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCC*ACCTCCTGCGATCCGAGCGCCCTGAGC
OVRT1_0129_D09.b : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCCCACCTCCTGCGATCCGAGCGCCCTGAGC
BFLT1_0099_H05.b : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCCCACCTCCTGCGATCCGAGCGCCCTGAGC
LVR01_0034_F08.b : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCCCACCTCCTGCGATCCGAGCGCCCTGAGC
KDN01_0028_A11.b : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCCCACCTCCTGCGATCCGAGCGCCCTGAGC
PTG01_0044_D07.b : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCCCACCTCCTGCGATCCGAGCGCCCTGAGC
PST01_0024_H08.b : GTGCAGCTTCTCCAAACTCCAGCCCTTCCTCCCACCTCCTGCGATCCGAGCGCCCTGAGC
20110601C-003243 : CACGGGTACGTGCTCATCAAGCCTGGGGTACGTCTGCATTTTG*TGGAGAT*GGGCTCCG
---------+---------+---------+---------+---------+---------+ 820
TCH01_0077_B06.b : CACGGGTACGTGCTCATCAAGCCTGGGGTACGTCTGCATTTTG*TGGAGAT*GGGCTCCG
PTG01_0011_D11.b : CACGGGTACTTGCTCATCAAGCCTGGGGTACGTCTGCATTTTGGTGGAGATGGGGCTCCG
OVRT1_0129_D09.b : CACGGGTACGTGCTCATCAAGCCTGGGGTACGTCTGCATTTTG*TGGAGAT*GGGCTCCC
BFLT1_0099_H05.b : CACGGGTACGTGCTCATCAAGCCTGGGGTACGTCTGCATTTTG*TGGAGAT*GGGCTCCG
LVR01_0034_F08.b : CACGGGTACTTGCTCATCAAGCCTGGGGGACCTCTGCATTTTG*TGAAGAT*GGGCTCCG
KDN01_0028_A11.b : CACGGGTACGTGCTCATCAAGCCTGGGGTACGTCTGCATTTTG*TGGAGAT*GGGCTCCG
PTG01_0044_D07.b : CACGGGTACGTGCTCATCAAGCCTGGGGTACGTCTGCATTTTG*TGGAGAT*GGGCTCCG
PST01_0024_H08.b : CACGGGTACGTGCTCATCAAGCCTGGGGTACGTCTGCATTTTG*TGGAGAT*GGGCTCTG
20110601C-003243 : GCCCTGCTGTGTGCCTCTGCCATGGATTTCCTGAGAGCTGGTTCTCTTGGAGGTACCAGA
---------+---------+---------+---------+---------+---------+ 880
TCH01_0077_B06.b : GCCCTGCTGTGTGCCTCTGCCATGGATTTCCTGAGAGCTGGTTCTCTTGAAAGTACCAGA
PTG01_0011_D11.b : GCCCTGCTGTGTGCCTCTGCCAGGGATTTCCTGAAAACTGGTTCCCCTGGAAGTACAAGA
OVRT1_0129_D09.b : GCCCTGCTGTGTGCCTCTGCCATGGATTTCCTGAGAGCTGGTTTCTCTGGANGTACCAGA
BFLT1_0099_H05.b : GCCCTGCTGTGTGCCTCTGCCATGGATTTCCTGAGAGCTGGTTCTCTTGGAGGTACCAGA
LVR01_0034_F08.b : GCCCTGCCGTGTGCCCCTGCCATGGATTTCCTtgaaaaccggttctcttggaaggtacca
KDN01_0028_A11.b : GCCCTGCTGTGTGCCTCTGCCATGGATTTCCTGAGAGCTGGTTCTCTTGGAGGTACCAGA
PTG01_0044_D07.b : GCCCTGCTGTGTGCCTCTGCCATGGATTTCCTGAGAGCTGGTTCTCTTGGAGGTACCAGA
PST01_0024_H08.b : GCCCTGCCGTGTGCCTCTGCCATGGATTTCCTGAGAGCTGGTTCTCTTGGAGGTACCAGA
20110601C-003243 : TCCCTGCCCTGGCCCAGGCGGGCTTCCGGGTGCTGGCTGTGGACATGAAAGGCTATGGAG
---------+---------+---------+---------+---------+---------+ 940
TCH01_0077_B06.b : TCCCTGCCCTGGCCCAGGCGGGCTTTCGGTTGCTGGCTGTGGACATGAAAGGCTATGGAG
PTG01_0011_D11.b : TCCCTGGCCTGGCCCAGGGGGGGTTCCCGGTGCTGGgttgtggaatgaaaggctttgaaa
OVRT1_0129_D09.b : TCCCTGCCCTGNCCCCAGCGGGCTTCCGG*TGCTGGCTGTGGAatgaaagctatggaagt
BFLT1_0099_H05.b : TCCCTGCCCTGGCCCAAGCGGGCTTCCGGGTGCTGGCTGTGGACATGAAAGGCTATGGAG
LVR01_0034_F08.b : aatccctgcccctggcccaaggcgggccttccgggtgctggctgttgaacttgaaaggct
KDN01_0028_A11.b : TCCCTGCCCTGGCCCAGGCGGGCTTCCGGGTGCTGGCTGTGGACATGAAAGGCTATGGAG
PTG01_0044_D07.b : TCCCTGCCCTGGCCCAGGCGGGCTTCCGGGTGCTGGCTGTGGACATGAAAGGCTATGGAG
PST01_0024_H08.b : TCCCTGCCCTGGCCCAGGCGGGCTTCCGGGTGCTGGCTGTGGACATGAAAGGCTATGGAG
20110601C-003243 : AGTCATCTGCTCCTCCCGAAATAGAAGAATATTCCTTGGAAGTGTTATGCAAGGACATGG
---------+---------+---------+---------+---------+---------+ 1000
TCH01_0077_B06.b : Aatcccctgctctccccaaataaaaaatattccttggaagtggttagcaaggtaaaaacc
PTG01_0011_D11.b : aaccttctgcctctccccaatataaaaataatcctttgaagtttttgcaaggactgggaa
OVRT1_0129_D09.b : cctctgctctccgaaataaagaatattcctggaagtgtatgcaggactggggaccttccg
BFLT1_0099_H05.b : AATCGTCTGCTCCTCCCcaataaaaaaatattccctggaaatggttatgcaaggacaggg
LVR01_0034_F08.b : tatggaaaaaccgtcctgcccccccccgaaaaaaaaaaaaaaaaatccccttgggaaaat
KDN01_0028_A11.b : AGTCGTCTGCTCCTCCCGAAATAGAAGA*TATTTCTTGGAAATGGTATGCAAGGACATGG
PTG01_0044_D07.b : AGTCGTCTGCTCCTCCCGAAATAGAAGAATATTCCTTGGAAGTGTTATGCAAGGACATGG
PST01_0024_H08.b : AGTCATCTGCTCCTCCCGAAATAGAAGAATATTCCTTGGAAGTGTTATGCAAGGACATGG
20110601C-003243 : TGACCTTCCTGAATAAGTTGGGCCTCTCTCAAGCCGTGTTCATTGGCCACGACTGGGGAA
---------+---------+---------+---------+---------+---------+ 1060
TCH01_0077_B06.b : tgttttgaaaacatcctttccatcctggggttttcttgaaaaaaaaccaaagttgggtat
PTG01_0011_D11.b : cctcccaaaaaaattgggccctctcaaccccggttctttggccaaaaggggggaggcgtt
OVRT1_0129_D09.b : aaaagtgggccctccccaaccgggtccttgccacaatgggaaggtgctggtgtgaaatgg
BFLT1_0099_H05.b : tgacctttcttgaaaaatttgggccccccccaaccggggttcatggcccccactggggna
LVR01_0034_F08.b : gtttttgccaggggaaatggggggaccctttcccgaaaaaaaatttgtgggccccccccc
KDN01_0028_A11.b : TGACCTTCCTGAATAAGTTGGGCCTCTCTC*AGCCGTGGTCATTGGCCACNACTGGGGAA
PTG01_0044_D07.b : TGACCTTCCTGAATAAGTTGGGCCTCTCTCAAGCCGTGTTCATTGGCCACGACTGGGGAA
PST01_0024_H08.b : TGACCTTCCTGAATAAGTTGGGCCTCTCTCAAGCCGTGTTCATTGGCCACGACTGGNGAG
20110601C-003243 : GCGTGCTGGTGTGGAACATGGCTCTCTTCTACCCTGAGAGAGTGAGGGCGGTGGCCAGTC
---------+---------+---------+---------+---------+---------+ 1120
TCH01_0077_B06.b : ttctttcaaccctaaaaaagacctctcccaccttttggaaaaaaccttgctcaagggtaa
PTG01_0011_D11.b : ggggggaaaaagggcctctcccccccaaaaaagaaggggggggccccctgaaaaccccct
OVRT1_0129_D09.b : ccctcccacccgaaaaaggggggggccacaaaaaccccttggccaaaaccaaggccccaa
BFLT1_0099_H05.b : ggcttgctggtgtgaaacaatgcttcctttctccctgaaaaaatggggcgggggcccatc
LVR01_0034_F08.b : caaagcccgcgggttcatttttggcccccccaaccgggggggagaggcggggccctgggg
KDN01_0028_A11.b : GCGGGCTGGTGTGGAAatgcctcctctctaccctgaaaaatgaaggcgggggccaatctg
PTG01_0044_D07.b : GCGTGCTGGTGTGGAACATGGCTCTCTTCTACCCTGANAGAGTGAGGNNCGTGGCCANTC
PST01_0024_H08.b : GCGTGCTGGTGTGGAACATGGCTCTCTTCTACCCTGAGAGAGTGAGGGCGGTGGCCAGTC
20110601C-003243 : TGAATACTCCCTTCATGCCATCAAATCCCAATGTGTCCCCCATGGAGATCATCAAAGCCA
---------+---------+---------+---------+---------+---------+ 1180
TCH01_0077_B06.b : aaatttcaaataagaccccangtcccgtaaaaccccatttttcaaatttttagggaaaaa
PTG01_0011_D11.b : cagggccaaaaccaaggggccccaggaaaaaccaaaaaccctcggttttttaaccctctt
OVRT1_0129_D09.b : ggaaactaaccaaccttttttacccccccttcaaacgggggggggggaatggaaaccggg
BFLT1_0099_H05.b : tgaaaaatcccctctggccccaaaccccagggggtcccaggggaaatcctcaagccatcc
LVR01_0034_F08.b : gggggggaaaaacaatgggccctcctccttttttcacaccccccggaaaaaaaaaaattg
KDN01_0028_A11.b : atactcccttcatgcatcaaatcacatgggtccccaggggaatcctcaagccaatccggc
PTG01_0044_D07.b : TGAATACTCCCTTCATGCCATCAAATCCCAATGTGTCCCCCATGGAGATCATCAAAGCCA
PST01_0024_H08.b : TGAATACTCCCTTCATGCCATCAAATCCCAATGTGTCCCCCATGGAGATCATCAAAGCCA
20110601C-003243 : ATCCTGTCTTTGATTACCAGCTCTACTTCAAAGAGCCGGGAGTGGCGGAAGCTGAACTGG
---------+---------+---------+---------+---------+---------+ 1240
TCH01_0077_B06.b : acagctccggggaatttt
PTG01_0011_D11.b : ctccaaacgggggggggggggtggaggaaaaaagggggtttttaaatcttttcaaagagg
OVRT1_0129_D09.b : ggtttaattttcaacggaaattccccacaacccgagggttttgggcaaaccccccccccc
BFLT1_0099_H05.b : tggctttatttacccctcttttcaaaaccggggtggcgaaggtaaattgaaaaaaaccgg
LVR01_0034_F08.b : gaaagggggggggggggggggggggccccccacattgtccctaaaaaaaaaataactcct
KDN01_0028_A11.b : tcttgataaccacctcctttcaaaacccggaatggcggagctgaatggaaacaaacctga
PTG01_0044_D07.b : ATCCGGTCCTTGATTACagctctaactcaagaaccgggagtggcggaagctgaactggaa
PST01_0024_H08.b : ATCCTGTCTTTGATTACCAGCTCTACTTCAAAGAGCCGGGAGTGGCGGAAGCTGAACTGG
20110601C-003243 : AACAGAACCTGGATCGGACTTTCAAAACTTCTTCAGAGCACATGATGAGACTTTTCTCAC
---------+---------+---------+---------+---------+---------+ 1300
TCH01_0077_B06.b :
PTG01_0011_D11.b : gggatttttccccaaaacctctatgtggtatttttgggggaacaaaaaccccccctttca
OVRT1_0129_D09.b : ggaaaattttttaaatgggcccccaagagggggagaaaannnnngnggnnnnttattttg
BFLT1_0099_H05.b : ttgggaattttaaaatctcttaaaacgaagagaaattttcccccaaaaaagg
LVR01_0034_F08.b : cccccccctcccctctttctctct
KDN01_0028_A11.b : ttcggacttttaaaatttttctaaaccaggttgagaatttctcctcccaaaaaatccccg
PTG01_0044_D07.b : caaaacctgaatcggacttccaaacttcctcggaccaatgatgaaactttctcaccacga
PST01_0024_H08.b : AACAGAACCTGGATCGGACTTTCAAAACTTCTTCAGAGCACATGATGAGACTTTTCTCAC
20110601C-003243 : ACCGAACAAAACCGTGAATTGGGAAGACTTTTTTGTGGGACCCCAGAGGAACCCGCCTCA
---------+---------+---------+---------+---------+---------+ 1360
TCH01_0077_B06.b :
PTG01_0011_D11.b : gagaaaaaattttttttttttttttt
OVRT1_0129_D09.b : ttggnnnccgggccgctgcctcggcccgcccggcccnt
BFLT1_0099_H05.b :
LVR01_0034_F08.b :
KDN01_0028_A11.b : taaatggaga
PTG01_0044_D07.b : cagagcccttgaatgggaggacttttggggggaccccaaaggacccgccctcccaaaaat
PST01_0024_H08.b : ACCGAACAAAACCGTGAATTGGGAAGACTTTTTTGTGGGACCCCAGAGGAACCCGCCTCA
20110601C-003243 : GCAGGCTATTCACCGAGGAGGA......................................
---------+---------+---------+---------+---------+---------+ 1382
TCH01_0077_B06.b :
PTG01_0011_D11.b :
OVRT1_0129_D09.b :
BFLT1_0099_H05.b :
LVR01_0034_F08.b :
KDN01_0028_A11.b :
PTG01_0044_D07.b : ccccaggaagaaccctttctatggcaaatttaaaaattgggttaggggccttaaaggtcc
PST01_0024_H08.b : GCAGGCTATTCACCGAGGAGGAatccagtcctatgggcacaattcaagagcctgggtcca
20110601C-003243 : ............................................................
---------+---------+---------+---------+---------+---------+ 1382
TCH01_0077_B06.b :
PTG01_0011_D11.b :
OVRT1_0129_D09.b :
BFLT1_0099_H05.b :
LVR01_0034_F08.b :
KDN01_0028_A11.b :
PTG01_0044_D07.b : caaaatgaaagaactggggggggtccaagcccaaaagaaaccattcccccctaggccccg
PST01_0024_H08.b : ggggcccctaactggtacggaacatggaaaggactggcatggggctgcaagctccggaag
20110601C-003243 : ............................................................
---------+---------+---------+---------+---------+---------+ 1382
TCH01_0077_B06.b :
PTG01_0011_D11.b :
OVRT1_0129_D09.b :
BFLT1_0099_H05.b :
LVR01_0034_F08.b :
KDN01_0028_A11.b :
PTG01_0044_D07.b : gaaaaaccggtctttcccaagtcccctgggaaaggtccccccgaagggaataggggggga
PST01_0024_H08.b : aaaatccgattcancccgaaggcccgtcgaaaaaaccggggttcctcccaatgtccacct
20110601C-003243 : ............................................................
---------+---------+---------+---------+---------+---------+ 1382
TCH01_0077_B06.b :
PTG01_0011_D11.b :
OVRT1_0129_D09.b :
BFLT1_0099_H05.b :
LVR01_0034_F08.b :
KDN01_0028_A11.b :
PTG01_0044_D07.b : ggaaaaaaaacccggttataattctttgggggagaagcacccggggaatttgggtgtggc
PST01_0024_H08.b : tggggaatgtttcccaccggaaggaacctttaggttgggacggacaaataaaaaccccgt
20110601C-003243 : ............................................................
---------+---------+---------+---------+---------+---------+ 1382
TCH01_0077_B06.b :
PTG01_0011_D11.b :
OVRT1_0129_D09.b :
BFLT1_0099_H05.b :
LVR01_0034_F08.b :
KDN01_0028_A11.b :
PTG01_0044_D07.b : gggggccctctccgggggggcctcttccccaccccggggaaaattaaaaaaaaaacannn
PST01_0024_H08.b : aaggacggatccttttgggggggaagggcgcaacaccgggtatacaattggggggggggt
20110601C-003243 : ............................................................
---------+---------+---------+---------+---------+---------+ 1382
TCH01_0077_B06.b :
PTG01_0011_D11.b :
OVRT1_0129_D09.b :
BFLT1_0099_H05.b :
LVR01_0034_F08.b :
KDN01_0028_A11.b :
PTG01_0044_D07.b : nnnnntattggggggggttttttaaaaaataaaacaccagat
PST01_0024_H08.b : ggcagagctcccaccttccgggg