Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-003380

Sequence: [FASTA format sequence] GTGATTAGAG GGATGATGGA CTATGCCTCA GAGGCAAACC AGGGAGAATG CAATGAAAAG TATCAAGGAA AGGTGAAGGA GAAGTGTTAA AAAGGGAATT TTGGAGAAGA TGAGGAAGAA AAAGGAGAGA GGCTAGAGAA AAACAGATTT AAGGGGTCGC TGTTTCCTTG AAAGCCAAGA AGCTTGTAGA GCAAAGAGGA CAAGATCCCA GATCTTTGCA GCCACCTGGC TGAGAAGAAG AGAAGAGAGG GAGGGTGGCC AACTTGATCC AGCTGAAGCA TCTCCAGGAG GCCTCCTCTG GATGTCCCAT CGAGGCTGCC CTTCTGCTAC AACGCGGAAT TGGTGATCCC CGAGCACGTG GACATGGCTT TGCTCAGCAA TATCCTAGCA GCCTATTCCT TTGTCTCAGA AAATCCCGAG CGAGCAGCTT TGTACTTTGT CTCTGGCGTG TGCATCGGGC TGGTCCTCAC CCTGGCTGCC TTGGTGATGA GGATCTCTTG CCACACAGAC TGCCGGCAGC CTCCCCAGAA GAAGTTCCTG CAGGACCGAG AAAGCAGCAG CAACAGCAGC GACAGTGAGG ATGGCAGCTC GGACGCCGCC TCCGACATCT CGATCCGGAG ACATCGCCGC TTCGAGAGGA CTTTGAACAA GAACGTCTTC ACCTCAGCGG AAGAGCTGGA GCGCGCCCAG AGGCTGGAGG AGCGGGAACG CATCATCAGG GAAATTTGGA TGAATGGCCA GCCGGAAGTT CCCGGCACCA GAAGCCTGAA CCGTTACTAC TAGGGGCTGG GTCAGGACCC CCGCACCGCT GTTAGCCTCC TGGGAGACAA AGGGTCCCCC CAGGGAGGGT GGCCACAAAA AGCCCAACGC GGTTCTGCTA TTGCTAAGGG CCGCAGAGAG GAGCGGGACA CCCCCATTTT CTAGCCAGAA GGATTGATTT CACCCTTTTA GACTCAATTT ATGGAGACGT AGAAAAACCA AGTTGTTTCA TCAACCTTTC CAGGTGCTGA AAACCCGCTC CGCTCCAACA CTGTGGATGG AGATGCGAGA AATGGAATTG TGGTTTCTCT TGATTTCTGA GGCTCTCGGG CGGTTTTTCA GACTTCACTG CGATGTGTTA TTTCTTTGC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
FAM176A family with sequence similarity 176, member A [Homo sapiens]. 178 7e-45 O

FAM176A family with sequence similarity 176, member A [Homo sapiens]. 178 7e-45 O

C21orf63 hypothetical protein LOC59271 precursor [Homo sapiens]. 63.2 4e-10

FAM176B hypothetical protein LOC55194 [Homo sapiens]. 61.6 1e-09 O

Locus	Definition	Score	E value	FL
FAM176A	family with sequence similarity 176, member A [Homo sapiens].	178	7e-45	O
FAM176A	family with sequence similarity 176, member A [Homo sapiens].	178	7e-45	O
C21orf63	hypothetical protein LOC59271 precursor [Homo sapiens].	63.2	4e-10
FAM176B	hypothetical protein LOC55194 [Homo sapiens].	61.6	1e-09	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Fam176a transmembrane protein 166 [Mus musculus]. 160 2e-39 O

4931408A02Rik hypothetical protein LOC70967 isoform 1 [Mus musculus]. 65.1 1e-10

4931408A02Rik hypothetical protein LOC70967 isoform 2 [Mus musculus]. 65.1 1e-10

Fam176b hypothetical protein LOC230752 [Mus musculus]. 61.2 1e-09 O

Locus	Definition	Score	E value	FL
Fam176a	transmembrane protein 166 [Mus musculus].	160	2e-39	O
4931408A02Rik	hypothetical protein LOC70967 isoform 1 [Mus musculus].	65.1	1e-10
4931408A02Rik	hypothetical protein LOC70967 isoform 2 [Mus musculus].	65.1	1e-10
Fam176b	hypothetical protein LOC230752 [Mus musculus].	61.2	1e-09	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC483095 PREDICTED: hypothetical protein XP_540210 [Canis familiaris]. 136 4e-32 O

LOC478402 PREDICTED: similar to Protein C21orf63 precursor (SUE21) isoform 2 [Canis familiaris]. 65.1 1e-10

		Locus	Definition	Score	E value	FL
		LOC483095	PREDICTED: hypothetical protein XP_540210 [Canis familiaris].	136	4e-32	O
		LOC478402	PREDICTED: similar to Protein C21orf63 precursor (SUE21) isoform 2 [Canis familiaris].	65.1	1e-10

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
LOC528994 PREDICTED: family with sequence similarity 176, member A-like [Bos taurus]. 84.3 2e-16 O

LOC528994 PREDICTED: family with sequence similarity 176, member A-like [Bos taurus]. 84.3 2e-16 O

C1H21orf63 hypothetical protein LOC516536 [Bos taurus]. 62 9e-10

C1H21ORF63 PREDICTED: chromosome 21 open reading frame 63 ortholog [Bos taurus]. 62 9e-10

FAM176B hypothetical protein LOC618094 [Bos taurus]. 61.2 2e-09 O

Locus	Definition	Score	E value	FL
LOC528994	PREDICTED: family with sequence similarity 176, member A-like [Bos taurus].	84.3	2e-16	O
LOC528994	PREDICTED: family with sequence similarity 176, member A-like [Bos taurus].	84.3	2e-16	O
C1H21orf63	hypothetical protein LOC516536 [Bos taurus].	62	9e-10
C1H21ORF63	PREDICTED: chromosome 21 open reading frame 63 ortholog [Bos taurus].	62	9e-10
FAM176B	hypothetical protein LOC618094 [Bos taurus].	61.2	2e-09	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100510899 PREDICTED: protein FAM176A-like isoform 2 [Sus scrofa]. 172 4e-43 O

LOC100628171 PREDICTED: uncharacterized protein C21orf63 homolog [Sus scrofa]. 63.2 3e-10

LOC100625157 PREDICTED: GC-rich sequence DNA-binding factor-like [Sus scrofa]. 58.9 5e-09 O

Locus	Definition	Score	E value	FL
LOC100510899	PREDICTED: protein FAM176A-like isoform 2 [Sus scrofa].	172	4e-43	O
LOC100628171	PREDICTED: uncharacterized protein C21orf63 homolog [Sus scrofa].	63.2	3e-10
LOC100625157	PREDICTED: GC-rich sequence DNA-binding factor-like [Sus scrofa].	58.9	5e-09	O

Assembly Members: 5 TOP

Library Plate Loc. Read Name Accession Full Seq.

KDN01 0013 A11 KDN01_0013_A11.b FS672146 AK393156
KDN01 0014 A11 KDN01_0014_A11.b FS672225
LVR01 0030 B01 LVR01_0030_B01.b BP441881
LVRM1 0020 B05 LVRM1_0020_B05.b BP138114
LVRM1 0124 A02 LVRM1_0124_A02.b BP448225

SNPs: 3 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
500 A 2 0 0.400 W N TAC/Y
G 1 2 0.600 TGC/C
540 A 0 2 0.400 B S CTA/L
G 3 0 0.600 CTG/L
657 C 1 2 0.600 W S GTC/V
G 2 0 0.400 GTG/V

Alignment: TOP

20110601C-003380 : ..................................GTGATTAGAGGGATGATGGACTATGC
                   ---------+---------+---------+---------+---------+---------+ 26
KDN01_0013_A11.b : cgaaattnnnnnncctgcgttggctatggaatgcGTGATTAGAGGGATGATGGACTATGC
KDN01_0014_A11.b :  nggtttnnnnnnncctgcgttggctctggaatgcgtgaTAGAGGGATGATGGACTATGC
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b :                                                             


20110601C-003380 : CTCAGAGGCAAACCAGGGAGAATGCAATGAAAAGTATCAAGGAAAGGTGAAGGAGAAGTG
                   ---------+---------+---------+---------+---------+---------+ 86
KDN01_0013_A11.b : CTCAGAGGCAAACCAGGGAGAATGCAATGAAAAGTATCAAGGAAAGGTGAAGGAGAAGTG
KDN01_0014_A11.b : CTCAGAGGCAAACCAGGGAGAATGCAATGAAAAGTATCAAGGAAAGGTGAAGGAGAAGTG
LVRM1_0124_A02.b :                                                           tc
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b :                                                             


20110601C-003380 : TTAAAAAGGGAATTTTGGAGAAGATGAGGAAGAAAAAGGAGAGAGGCTAGAGAAAAACAG
                   ---------+---------+---------+---------+---------+---------+ 146
KDN01_0013_A11.b : TTAAAAAGGGAATTTTGGAGAAGATGAGGAAGAAAAAGGAGAGAGGCTAGAGAAAAACAG
KDN01_0014_A11.b : TTAAAAAGGGAATTTTGGAGAAGATGAGGAAGAAAAAGGAGAGAGGCTAGAGAAAAACAG
LVRM1_0124_A02.b : agttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0020_B05.b :                                        agttgacxxxxxxxxxxxxxx
LVR01_0030_B01.b :                               cxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-003380 : ATTTAAGGGGTCGCTGTTTCCTTGAAAGCCAAGAAGCTTGTAGAGCAAAGAGGACAAGAT
                   ---------+---------+---------+---------+---------+---------+ 206
KDN01_0013_A11.b : ATTTAAGGGGTCGCTGTTTCCTTGAAAGCCAAGAAGCTTGTAGAGCAAAGAGGACAAGAT
KDN01_0014_A11.b : ATTTAAGGGGTCGCTGTTTCCTTGAAAGCCAAGAAGCTTGTAGAGCAAAGAGGACAAGAT
LVRM1_0124_A02.b : xTTTAAGGGGTCGCTGTTTCCTTGAAAGCCAAGAAGCTTGTAGAGCAAAGAGGACAAGAT
LVRM1_0020_B05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxctatgcctcagaggcaaacca
LVR01_0030_B01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcacaa


20110601C-003380 : CCCAGATCTTTGCAGCCACCTGGCTGAGAAGAAGAGAAGAGAGGGAGGGTGGCCAACTTG
                   ---------+---------+---------+---------+---------+---------+ 266
KDN01_0013_A11.b : CCCAGATCTTTGCAGCCACCTGGCTGAGAAGAAGAGAAGAGAGGGAGGGTGGCCAACTTG
KDN01_0014_A11.b : CCCAGATCTTTGCAGCCACCTGGCTGAGAAGAAGAGAAGAGAGGGAGGGTGGCCAACTTG
LVRM1_0124_A02.b : CCCAGATCTTTGCAGCCACCTGGCTGAGAAGAAGAGAAGAGAGGGAGGGTGGCCAACTTG
LVRM1_0020_B05.b : ggaagaatgcaatgaaaagtatcaaggaAAGAAGAGAAGAGAGGGAGGGTGGCCAACTTG
LVR01_0030_B01.b : gtgccatcagtacaggggagagcagagccAGAAGAGAAGAGAGGGAGGGTGGCCAACTTG


20110601C-003380 : ATCCAGCTGAAGCATCTCCAGGAGGCCTCCTCTGGATGTCCCATCGAGGCTGCCCTTCTG
                   ---------+---------+---------+---------+---------+---------+ 326
KDN01_0013_A11.b : ATCCAGCTGAAGCATCTCCAGGAGGCCTCCTCTGGATGTCCCATCGAGGCTGCCCTTCTG
KDN01_0014_A11.b : ATCCAGCTGAAGCATCTCCAGGAGGCCTCCTCTGGATGTCCCATCGAGGCTGCCCTTCTG
LVRM1_0124_A02.b : ATCCAGCTGAAGCATCTCCAGGAGGCCTCCTCTGGATGTCCCATCGAGGCTGCCCTTCTG
LVRM1_0020_B05.b : ATCCAGCTGAAGCATCTCCAGGAGGCCTCCTCTGGATGTCCCATCGAGGCTGCCCTTCTG
LVR01_0030_B01.b : ATCCAGCTGAAGCATCTCCAGGAGGCCTCCTCTGGATGTCCCATCGAGGCTGCCCTTCTG


20110601C-003380 : CTACAACGCGGAATTGGTGATCCCCGAGCACGTGGACATGGCTTTGCTCAGCAATATCCT
                   ---------+---------+---------+---------+---------+---------+ 386
KDN01_0013_A11.b : CTACAACGCGGAATTGGTGATCCCCGAGCACGTGGACATGGCTTTGCTCAGCAATATCCT
KDN01_0014_A11.b : CTACAACGCGGAATTGGTGATCCCCGAGCACGTGGACATGGCTTTGCTCAGCAATATCCT
LVRM1_0124_A02.b : CTACAACGCGGAATTGGTGATCCCCGAGCACGTGGACATGGCTTTGCTCAGCAATATCCT
LVRM1_0020_B05.b : CTACAACGCGGAATTGGTGATCCCCGAGCACGTGGACATGGCTTTGCTCAGCAATATCCT
LVR01_0030_B01.b : CTACAACGCGGAATTGGTGATCCCCGAGCACGTGGACATGGCTTTGCTCAGCAATATCCT


20110601C-003380 : AGCAGCCTATTCCTTTGTCTCAGAAAATCCCGAGCGAGCAGCTTTGTACTTTGTCTCTGG
                   ---------+---------+---------+---------+---------+---------+ 446
KDN01_0013_A11.b : AGCAGCCTATTCCTTTGTCTCAGAAAATCCCGAGCGAGCAGCTTTGTACTTTGTCTCTGG
KDN01_0014_A11.b : AGCAGCCTATTCCTTTGTCTCAGAAAATCCCGAGCGAGCAGCTTTGTACTTTGTCTCTGG
LVRM1_0124_A02.b : AGCAGCCTATTCCTTTGTCTCAGAAAATCCCGAGCGAGCAGCTTTGTACTTTGTCTCTGG
LVRM1_0020_B05.b : AGCAGCCTATTCCTTTGTCTCAGAAAATCCCGAGCGAGCAGCTTTGTACTTTGTCTCTGG
LVR01_0030_B01.b : AGCAGCCTATTCCTTTGTCTCAGAAAATCCCGAGCGAGCAGCTTTGTACTTTGTCTCTGG


20110601C-003380 : CGTGTGCATCGGGCTGGTCCTCACCCTGGCTGCCTTGGTGATGAGGATCTCTTGCCACAC
                   ---------+---------+---------+---------+---------+---------+ 506
KDN01_0013_A11.b : CGTGTGCATCGGGCTGGTCCTCACCCTGGCTGCCTTGGTGATGAGGATCTCTTACCACAC
KDN01_0014_A11.b : CGTGTGCATCGGGCTGGTCCTCACCCTGGCTGCCTTGGTGATGAGGATCTCTTACCACAC
LVRM1_0124_A02.b : CGTGTGCATCGGGCTGGTCCTCACCCTGGCTGCCTTGGTGATGAGGATCTCTTGCCACAC
LVRM1_0020_B05.b : CGTGTGCATCGGGCTGGTCCTCACCCTGGCTGCCTTGGTGATGAGGATCTCTTGCCACAC
LVR01_0030_B01.b : CGTGTGCATCGGGCTGGTCCTCACCCTGGCTGCCTTGGTGATGAGGATCTCTTGCCACAC


20110601C-003380 : AGACTGCCGGCAGCCTCCCCAGAAGAAGTTCCTGCAGGACCGAGAAAGCAGCAGCAACAG
                   ---------+---------+---------+---------+---------+---------+ 566
KDN01_0013_A11.b : AGACTGCCGGCAGCCTCCCCAGAAGAAGTTCCTGCAGGACCGAGAAAGCAGCAGCAACAG
KDN01_0014_A11.b : AGACTGCCGGCAGCCTCCCCAGAAGAAGTTCCTGCAGGACCGAGAAAGCAGCAGCAACAG
LVRM1_0124_A02.b : AGACTGCCGGCAGCCTCCCCAGAAGAAGTTCCTACAGGACCGAGAAAGCAGCAGCAACAG
LVRM1_0020_B05.b : AGACTGCCGGCAGCCTCCCCAGAAGAAGTTCCTACAGGACCGAGAAAGCAGCAGCAACAG
LVR01_0030_B01.b : AGACTGCCGGCAGCCTCCCCAGAAGAAGTTCCTGCAGGACCGAGAAAGCAGCAGCAACAG


20110601C-003380 : CAGCGACAGTGAGGATGGCAGCTCGGACGCCGCCTCCGACATCTCGATCCGGAGACATCG
                   ---------+---------+---------+---------+---------+---------+ 626
KDN01_0013_A11.b : CAGCGACAGTGAGGATGGCAGCTCGGACGCCGCCTCCGACATCTCGATCCGGAGACATCG
KDN01_0014_A11.b : CAGCGACAGTGAGGATGGCAGCTCGGACGCCGCCTCCGACATCTCGATCCGGAGACATCG
LVRM1_0124_A02.b : CAGCGACAGTGAGGATGGCAGCTCGGACGCCGCCTCCGACATCTCGATCCGGAGACATCG
LVRM1_0020_B05.b : CAGCGACNGTGAGGATGGCAGCTCGGACGCCGCCTCCGACATCTCGATCCGGAAACATCG
LVR01_0030_B01.b : CAGCGACAGTGAGGATGGCAGCTCGGACGCCGCCTCCGACATCTCGATCCGGAGACATCG


20110601C-003380 : CCGCTTCGAGAGGACTTTGAACAAGAACGTCTTCACCTCAGCGGAAGAGCTGGAGCGCGC
                   ---------+---------+---------+---------+---------+---------+ 686
KDN01_0013_A11.b : CCGCTTCGAGAGGACTTTGAACAAGAACGTGTTCACCTCAGCGGAAGAGCTGGAGCGCGC
KDN01_0014_A11.b : CCGCTTCGAGAGGACTTTGAACAAGAACGTGTTCACCTCAGCGGAAGAGCTGGAGCGCGC
LVRM1_0124_A02.b : CCGCTTCGAGAGGACTTTGAACAAGAACGTCTTCACCTCAGCGGAAGAGCTGGAGCGCGC
LVRM1_0020_B05.b : CCGCTTCGAGAGGACTTTGAACAAGAACGTCTTCACCTCANCGGAAGAGCTGGAGCGCGC
LVR01_0030_B01.b : CCGCTTCGAGAGGACTTTGAACAAGAACGTCTTCACCTCAGCGGAAGAGCTGGAGCGCGC


20110601C-003380 : CCAGAGGCTGGAGGAGCGGGAACGCATCATCAGGGAAATTTGGATGAATGGCCAGCCGGA
                   ---------+---------+---------+---------+---------+---------+ 746
KDN01_0013_A11.b : TCAGAGGCTGGAGGAGCGGGAACGCATCATCAGGGAAATTTGGATGAATGGCCAGCCGGA
KDN01_0014_A11.b : TCAGAGGCTGGAGGAGCGGGAACGCATCATCAGGGAAATTTGGATGAATGGCCAGCCGGA
LVRM1_0124_A02.b : CCAGAGGCTGGAGGAGCGGGAACGCATCATCAGGGAAATTTGGATGAATGGCCAGCCGGA
LVRM1_0020_B05.b : CCAGAGGCTGGAGGAGCGGGAACGCATCATCAGGGAAATTTGGATGAATGGCCAGCCGGA
LVR01_0030_B01.b : CCAGAGGCTGGAGGAGCGGGAACGCATCATCAGGGAAATTTGGATGAATGGCCAGCCGGA


20110601C-003380 : AGTTCCCGGCACCAGAAGCCTGAACCGTTACTACTAGGGGCTGGGTCAGGACCCCCGCAC
                   ---------+---------+---------+---------+---------+---------+ 806
KDN01_0013_A11.b : AGTTCCCGGCACCAGAAGCCTGAACCGTTACTACTAGGGGCTGGGTCAGGACCCCCGCAC
KDN01_0014_A11.b : AGTTCCCGGCACCAGAAGCCTGAACCGTTACTACTAGGGGCTGGGTCAGGACCCCCGCAC
LVRM1_0124_A02.b : AGTTCCCGGCACCAGAAGCCTGAACCGTTACTACTAGGGGCTGGGTCAGGACCCCCGCAC
LVRM1_0020_B05.b : AGTTCCCGGCACCAGAA*CCTGAACCGTTACTACTAGGGGCTGGGTCAAGACCCCGGCAC
LVR01_0030_B01.b : AGTTCCCGGCACCAGAAGCCTGAACCGTTACTACTAGGGGCTGGGTCAGGACCCCCGCAC


20110601C-003380 : CGCTGTTAGCCTCCTGGGAGACAAAGGGTCCCCCCAGGGAGGGTGGCCACAAAAAGCCCA
                   ---------+---------+---------+---------+---------+---------+ 866
KDN01_0013_A11.b : CGCTGTTAGCCTCCTGGGAGACAAAGGGTCCCCCCAGGGAGGGTGGCCACAAAAAGCCCA
KDN01_0014_A11.b : CGCTGTTAGCCTCCTGGGAGACAAAGGGTCCCCCCAGGGAGGGTGGCCACAAAAAGCCCA
LVRM1_0124_A02.b : CGCTGTTAGCCTCCTGGGAGACAAAGGGTCCCCCAGGGGAGGGTGGCCACAAAAgcccca
LVRM1_0020_B05.b : *GCTNTTAGCCTCCTGGGAGACAAgggtccccccggggaggtggccacaaaagcccacgc
LVR01_0030_B01.b : CGCTGTTAGCCTCCTGGGAGACAAAGGGTCCCCCCAGGGAGGGTGGCCACAAAAAGCCCA


20110601C-003380 : ACGCGGTTCTGCTATTGCTAAGGGCCGCAGAGAGGAGCGGGACACCCCCATTTTCTAGCC
                   ---------+---------+---------+---------+---------+---------+ 926
KDN01_0013_A11.b : ACGCGGTTCTGCTATTGCTA*GGGCCGCAAAGAGGAGCGGGACACCCCCATTTTCTAGCC
KDN01_0014_A11.b : ACGCGGTTCTGCTATTGCTAgggccgcaaagaggagcgggacacccccattttctagcca
LVRM1_0124_A02.b : cgcga                                                      
LVRM1_0020_B05.b : ggttcttctattcta                                            
LVR01_0030_B01.b : ACGCGGTTCTGCTATTGCTAAGGGCCGCAGAGAGGAGCGGGACACCCCCATTTTCTAGCC


20110601C-003380 : AGAAGGATTGATTTCACCCTTTTAGACTCAATTTATGGAGACGTAGAAAAACCAAGTTGT
                   ---------+---------+---------+---------+---------+---------+ 986
KDN01_0013_A11.b : GGAAGGGATGATTTCACCCTTTTAAACTC*ATTTATGGAGACGTAGAAAAACCAAGTTGg
KDN01_0014_A11.b : gaaagatggattcacccttttagactcaatttatggagacgtaaaaaaaccaagttgggt
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : AGAAGGATTGATTTCACCCTTTTAGACTCAATTTATGGAGACGTAGAAAAACCAAGTTGT


20110601C-003380 : TTCATCAACCTTTCCAGGTGCTGAAAACCCGCTCCGCTCCAACACTGTGGATGGAGATGC
                   ---------+---------+---------+---------+---------+---------+ 1046
KDN01_0013_A11.b : tcatcaccttttcaggtgctgaaaaccgctccgctcaacactgtggatgggatgcgaaaa
KDN01_0014_A11.b : catcaccctttccagtgctgaaaacccgctccgctcaacactgtggagggaatgcgaaaa
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : TTCATCAACCTTTCCAGGTGCTGAAAACCCGCTCCGCTCCAACACTGTGGATGGAGATGC


20110601C-003380 : GAGAAATGGAATTGTGGTTTCTCTTGATTTCTGAGGCTCTCGGGCGGTTTTTCAGACTTC
                   ---------+---------+---------+---------+---------+---------+ 1106
KDN01_0013_A11.b : tgaaatgtggtttccttgattctgaaggtctccggcttttttcaactcttgcaaggggta
KDN01_0014_A11.b : tggaaatggggtttctctggattctgaggcttccggcgttttttcaaactcatggcgagt
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : GAGAAATGGAATTGTGGTTTCTCTTGATTTCTGAGGCTCTCGGGCGGTTTTTCAGACTTC


20110601C-003380 : ACTGCGATGTGTTATTTCTTTGC.....................................
                   ---------+---------+---------+---------+---------+---------+ 1129
KDN01_0013_A11.b : cttcttgcaaggaaaacttttatacccgaaggcaggaaaaacgggtttacttaccacgaa
KDN01_0014_A11.b : gtacttctttcaaaggaaccttattttcccgaaggcttggaagacagggttacctaaacc
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : ACTGCGATGTGTTATTTCTTTGCaaaaggaaacattattatagccttgagggctaggaaa


20110601C-003380 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1129
KDN01_0013_A11.b : atgccaggtcttaaaaatccgggctgggagggatttttgaccaagcccggaccgggtttt
KDN01_0014_A11.b : ggtaaggcaggtttcaaatgaccccggcttggggggaattttgaccaaaagcggaatcgg
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : aagcaagggttaacctaacaccagtaaaatgcaatggtcctaaaatgactccatgcctat


20110601C-003380 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1129
KDN01_0013_A11.b : tttagggggattttaaacctggtttgggggcacccccctctttacgggccccggggtcaa
KDN01_0014_A11.b : tttatattaaggcggttttaaacccttggttggaggggaccctcccttttagggggcctc
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : gggaggttgaatttttgattcccaaaaaagcatggatcccgggccttttttattttaaag


20110601C-003380 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1129
KDN01_0013_A11.b : cccttttttaagctccctctcccgaaagaattgtta                       
KDN01_0014_A11.b : gggataaaaccatttttttaggtccctctccccggg                       
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : ggctggaatttttaaaaaatcctttggggtttggccaggggggccaaccccccccctccc


20110601C-003380 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1129
KDN01_0013_A11.b :                                                             
KDN01_0014_A11.b :                                                             
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : catttttttaacctgtggggccccctcccccggggggggaattctttaaaaaaccccccc


20110601C-003380 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1129
KDN01_0013_A11.b :                                                             
KDN01_0014_A11.b :                                                             
LVRM1_0124_A02.b :                                                             
LVRM1_0020_B05.b :                                                             
LVR01_0030_B01.b : aaattttttttttttttttttttttattaca