[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-003599

Length: 1,383

Sequence [FASTA format sequence]
TTTTCTCTTT CGATTCTTCA GCTCTATCTG GGCCCAGAGG GTGTGTCTGG TTATTGCAGA
GCCGCACAGC TGGGGACCAG ATCCTCACGG TGAGAGGAGC TGCTTTGTGT TCACCCTCAG
CCCAAGGAAG ACTCCTGGGG TGAAGCCACA CCTCCGTTCC AGCCTGACCC AGACGGAGCG
GAAGGGAGAT CCCTGAGACC CTGCAGCTGC CACCATGAGC TCAGATGACC CGAGGGACCA
CTCAGAGAGT GAAAGCTTTT TGGAGGAGGT CACTGAGTAT TTTCGGAACA CAGTGAGTAG
GGAAGAACTG CAGCTCCTGC TCACTGAAGG CAAAGCCTGG GAGAAATTTG TGACTGAGGC
TGATTTGTCC AGGGAAGAGG CAGATGCACT GCGTGAGTAT CTGAAGGAGC TGGAAACAGA
CTTGGCCTTG GAGGACAAAG ACTCCCTCCT ACAAGACCAG CTGGAGAGAA CGAGGTTTTT
GCAGGAGTTT CCCCGAGTGA AACTGGAGAT CGAGGCGCAA ATAGGAAAGC TGCATGCGCT
TGCGGCCAAG GTTGACAAGG TGCACAGGGA CTGCACCATC TCCAACGTGG TGGCCACCTC
CACCGGTGCT GCGTCTGGCA TCCTGACCGT TCTTGGTCTG GCTCTGGCAC CCGTGACAGC
AGGGTTCAGT CTGGCACTCT CTGCCACTGG GTTAGGGCTG GGAGTAGCGG CTTCTGTGAC
TGGTGTGTCC GCCAGCATTG TGGACAAGGT CAACAGTTCA TTAGCAGAAA GAGAAGCCAG
TCGCCTCATG TCCACCAGCT TCAACAAAGC GGAGGTGATT TCAGAGTCTC TGGGCAAGAG
CACACCCCAA ATTGTGTCCT TAACAAAGAA TTTCATCCAA GGCTTGCCAC GCATTGGGAA
GAATATCCGG GCCATCAAGC TGGCCAAAGC CAACCCTCGC TTAGCAGCCA ATGCCAAGCG
CTTCATGACC GCTGGGCAAG TCTCAGTTCG AAACAGAAGG CTGGTGAAGA AAACGTTTGA
AGGGACAGTT CTGGCAATGA CCAAAAATGC CCGGATCATC GGTATGGCTA CTGCAGGTGT
TGCCCTTCTG ATGGACGTGG GCTTCCTGGT GAAAGAGTCA ATCCACTTGC AGCAGGGGGC
AAAGGCAGAG TCAGCAGAAA GGCTGAGACA GCAGGCCCAG GAGCTGGAGA AGAAGCTGGA
GGAGCTCACC AGGATCTATG AGAGTCTGCA GTAAGGCCTG AGTCCGCCAC CCCCAGAGCA
GTGCAGAGAC ACGTCCGGGG CCAACACGCA GTGGTACCTT TGGAGCAAAG AGACGTGGAC
ATAAAATGAT AAAAGTGGGG AAGCTGAGCT AGTCTCTCTG ACTCCTCTTT TGGTCTATTT
TCT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAPOL3apolipoprotein L3 isoform 1 [Homo sapiens]. 2502e-66O
Contig/Assembly ProteinAPOL2apolipoprotein L2 [Homo sapiens]. 2496e-66O
Contig/Assembly ProteinAPOL2apolipoprotein L2 [Homo sapiens]. 2496e-66O
Contig/Assembly ProteinAPOL4apolipoprotein L4 isoform 2 precursor [Homo sapiens]. 1981e-50O
Contig/Assembly ProteinAPOL4apolipoprotein L4 isoform 1 [Homo sapiens]. 1981e-50O
Contig/Assembly ProteinAPOL1apolipoprotein L1 isoform c precursor [Homo sapiens]. 1951e-49O
Contig/Assembly ProteinAPOL1apolipoprotein L1 isoform a precursor [Homo sapiens]. 1951e-49O
Contig/Assembly ProteinAPOL1apolipoprotein L1 isoform b precursor [Homo sapiens]. 1951e-49
Contig/Assembly ProteinAPOL1apolipoprotein L1 isoform a precursor [Homo sapiens]. 1951e-49O
Contig/Assembly ProteinAPOL6apolipoprotein L6 [Homo sapiens]. 1594e-39O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinApol8apolipoprotein L2 [Mus musculus]. 2841e-76O
Contig/Assembly ProteinApol7bapolipoprotein L 7b [Mus musculus]. 2762e-74O
Contig/Assembly ProteinApol7eapolipoprotein L 7e [Mus musculus]. 2732e-73O
Contig/Assembly ProteinApol7capolipoprotein L 7c [Mus musculus]. 2533e-67O
Contig/Assembly ProteinApol7aapolipoprotein L 7a [Mus musculus]. 2357e-62
Contig/Assembly ProteinApol7aapolipoprotein L 7a [Mus musculus]. 2357e-62
Contig/Assembly ProteinApol9bapolipoprotein L 9b [Mus musculus]. 1927e-49O
Contig/Assembly ProteinApol9bapolipoprotein L 9b [Mus musculus]. 1927e-49O
Contig/Assembly ProteinApol9aapolipoprotein L 9a [Mus musculus]. 1871e-47O
Contig/Assembly ProteinApol9aapolipoprotein L 9a [Mus musculus]. 1871e-47O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC610459PREDICTED: similar to Apolipoprotein-L3 (Apolipoprotein L-III) (ApoL-III) (TNF-inducible protein CG12-1) (CG12_1) [Canis familiaris]. 1995e-51O
Contig/Assembly ProteinLOC610455PREDICTED: similar to apolipoprotein L, 3 (predicted) [Canis familiaris]. 1772e-44O
Contig/Assembly ProteinLOC481282PREDICTED: similar to apolipoprotein L6 [Canis familiaris]. 1521e-36O
Contig/Assembly ProteinLOC474520PREDICTED: similar to apolipoprotein L5 [Canis familiaris]. 1297e-30O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAPOL3apolipoprotein L, 3 [Bos taurus]. 382e-106O
Contig/Assembly ProteinAPOL3apolipoprotein L3 [Bos taurus]. 2871e-77O
Contig/Assembly ProteinLOC527460PREDICTED: apolipoprotein L2-like [Bos taurus]. 2788e-75O
Contig/Assembly ProteinLOC521214PREDICTED: apolipoprotein L6-like [Bos taurus]. 2788e-75O
Contig/Assembly ProteinLOC527460PREDICTED: apolipoprotein L2-like [Bos taurus]. 2788e-75O
Contig/Assembly ProteinLOC521214PREDICTED: apolipoprotein L2-like, partial [Bos taurus]. 2781e-74O
Contig/Assembly ProteinLOC510193apolipoprotein L, 3-like [Bos taurus]. 2741e-73O
Contig/Assembly ProteinLOC514282PREDICTED: apolipoprotein L, 3-like [Bos taurus]. 2718e-73O
Contig/Assembly ProteinLOC786352PREDICTED: apolipoprotein L, 3-like [Bos taurus]. 2718e-73O
Contig/Assembly ProteinLOC786352PREDICTED: apolipoprotein L, 3-like [Bos taurus]. 2718e-73O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100517940PREDICTED: apolipoprotein L3-like, partial [Sus scrofa]. 471e-133O
Contig/Assembly ProteinLOC100626503PREDICTED: apolipoprotein L3-like [Sus scrofa]. 2861e-77O
Contig/Assembly ProteinAPOL3PREDICTED: apolipoprotein L3 [Sus scrofa]. 2862e-77O
Contig/Assembly ProteinLOC100518305PREDICTED: apolipoprotein L6-like [Sus scrofa]. 1395e-33O


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ITT010005E02ITT01_0005_E02.bBW976448 
ITT010035H06ITT01_0035_H06.bBW979194 AK231318
KDN010072G02KDN01_0072_G02.bFS676192 
LNG010005D01LNG01_0005_D01.bBP435944 AK231655
MLN010029E10MLN01_0029_E10.bCJ009895 AK346646
OVRT10023F03OVRT1_0023_F03.bFS688297 
PST010076D09PST01_0076_D09.bFS702830 AK396689
THY010098B11THY01_0098_B11.bBP161698 
UTR010088C06UTR01_0088_C06.bCJ038108 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
110C300.429W-
T400.571
610C200.222WSGCC/A
T700.778GCT/A


Alignment:      TOP

20110601C-003599 : ..........................................................TT
---------+---------+---------+---------+---------+---------+ 2
PST01_0076_D09.b : nnnncctgctgtggctctggaTT
MLN01_0029_E10.b : nnngggttggacttgacagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0023_F03.b : nnntttctatagcgnacgxxxxxxx
LNG01_0005_D01.b : ggtttgttttagcttcgtgxxxxxxxxxxxxxxxxxxxx
ITT01_0035_H06.b : ntttgatgaa
ITT01_0005_E02.b : ntttg
KDN01_0072_G02.b :
THY01_0098_B11.b :
UTR01_0088_C06.b :
20110601C-003599 : TTCTCTTTCGATTCTTCAGCTCTATCTGGGCCCAGAGGGTGTGTCTGGTTATTGCAGAGC
---------+---------+---------+---------+---------+---------+ 62
PST01_0076_D09.b : TTCTCTTTCGATTCTTCAGCTCTATCTGGGCCCAGAGGGTGTGTCTGGTTATTGCAGAGC
MLN01_0029_E10.b : xxxxxxxxxxxxxxxxxxGCTCTATCTGGGCCCAGAGGGTGTGTCTGGTTATTGCAGAGC
OVRT1_0023_F03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtTATTGCAGAGC
LNG01_0005_D01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxacTATTGCAGAGC
ITT01_0035_H06.b : caxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxctggATTGCAGAGC
ITT01_0005_E02.b : atgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTGCAGAGC
KDN01_0072_G02.b : tttttactgcgttggctctggatgcgag
THY01_0098_B11.b :
UTR01_0088_C06.b :
20110601C-003599 : CGCACAGCTGGGGACCAGATCCTCACGGTGAGAGGAGCTGCTTTGTGTTCACCCTCAGCC
---------+---------+---------+---------+---------+---------+ 122
PST01_0076_D09.b : CGCACAGCTGGGGACCAGATCCTCACGGTGAGAGGAGCTGCTTTGTGCTCACCCTCAGCC
MLN01_0029_E10.b : CGCACAGCTGGGGACCAGATCCTCACGGTGAGAGGAGCTGCTTTGTGTTCACCCTCAGCC
OVRT1_0023_F03.b : CGCACAGCTGGGGACCAGATCCTCACGGTGAGAGGAGCTGCTTTGTGTTCACCCTCAGCC
LNG01_0005_D01.b : CGCACAGCTGGGGACCAGATCCTCACGGTGAGAGGAGCTGCTTTGTGCTCACCCTCAGCC
ITT01_0035_H06.b : CGCACAGCTGGGGACCAGATCCTCACGGTGAGAGGAGCTGCTTTGTGTTCACCCTCAGCC
ITT01_0005_E02.b : CGCACAGCTGGGGACCAGATCCTCACGGTGAGAGGAGCTGCTTTGTGTTCACCCTCAGCC
KDN01_0072_G02.b : ccgcCAGCTGGGGACCAGATCCTCACGGTGAGAGGAGCTGCTTTGTGCTCACCCTCAGCC
THY01_0098_B11.b :
UTR01_0088_C06.b :
20110601C-003599 : CAAGGAAGACTCCTGGGGTGAAGCCACACCTCCGTTCCAGCCTGACCCAGA**CGGAGCG
---------+---------+---------+---------+---------+---------+ 180
PST01_0076_D09.b : CAAGGAAGACTCCTGGGGTGAAGCCACACCTCCGTTCCAGCCTGACCCAGAAACGGAGCG
MLN01_0029_E10.b : CAAGGAAGACTCCTGGGGTGAAGCCACACCTCCGTTCCAGCCTGACCCAGA**CGGAGCG
OVRT1_0023_F03.b : CAAGGAAGACTCCTGGGGTGAAGCCACACCTCCGTTCCAGCCTGACCCAGA**CGGAGCG
LNG01_0005_D01.b : CAAGGAAGACTCCTGGGGTGAAGCCACACCTCCGTTCCAGCCTGACCCAGAAACGGAGCG
ITT01_0035_H06.b : CAAGGAAGACTCCTGGGGTGAAGCCACACCTCCGTTCCAGCCTGACCCAGA**CGGAGCG
ITT01_0005_E02.b : CAAGGAAGACTCCTGGGGTGAAGCCACACCTCCGTTCCAGCCTGACCCAGA**CGGAGCG
KDN01_0072_G02.b : CAAGGAAGACTCCTGGGGTGAAGCCACACCTCCGTTCCAGCCTGACCCAGAAACGGAGCG
THY01_0098_B11.b : gggcatxxxxxxxxxxxxxxxxx
UTR01_0088_C06.b :
20110601C-003599 : GAAGGGAGATCCCTGAGACCCTGCAGCTGCCACCATGAGCTCAGATGACCCGAGGGACCA
---------+---------+---------+---------+---------+---------+ 240
PST01_0076_D09.b : GAAGGGAGATCCCTGAGACCCTGCAGCTGCCACCATGAGCTCAGATGACCCGAGGGACCA
MLN01_0029_E10.b : GAAGGGAGATCCCTGAGACCCTGCAGCTGCCACCATGAGCTCAGATGACCCGAGGGACCA
OVRT1_0023_F03.b : GAAGGGAGATCCCTGAGACCCTGCAGCTGCCACCATGAGCTCAGATGACCCGAGGGACCA
LNG01_0005_D01.b : GAAGGGAGATCCCTGAGACCCTGCAGCTGCCACCATGAGCTCAGATGACCCGAGGGACCA
ITT01_0035_H06.b : GAAGGGAGATCCCTGAGACCCTGCAGCTGCCACCATGAGCTCAGATGACCCGAGGGACCA
ITT01_0005_E02.b : GAAGGGAGATCCCTGAGACCCTGCAGCTGCCACCATGAGCTCAGATGACCCGAGGGACCA
KDN01_0072_G02.b : GAAGGGAGATCCCTGAGACCCTGCAGCTGCCACCATGAGCTCAGATGACCCGAGGGACCA
THY01_0098_B11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0088_C06.b :
20110601C-003599 : CTCAGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
---------+---------+---------+---------+---------+---------+ 300
PST01_0076_D09.b : CTCAGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
MLN01_0029_E10.b : CTCAGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
OVRT1_0023_F03.b : CTCAGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
LNG01_0005_D01.b : CTCAGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
ITT01_0035_H06.b : CTCAGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
ITT01_0005_E02.b : CTCAGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
KDN01_0072_G02.b : CTCAGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
THY01_0098_B11.b : xxxxGAGAGTGAAAGCTTTTTGGAGGAGGTCACTGAGTATTTTCGGAACACAGTGAGTAG
UTR01_0088_C06.b :
20110601C-003599 : GGAAGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
---------+---------+---------+---------+---------+---------+ 360
PST01_0076_D09.b : GGAAGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
MLN01_0029_E10.b : GGAAGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
OVRT1_0023_F03.b : GGAAGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
LNG01_0005_D01.b : GGAAGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
ITT01_0035_H06.b : GGAAGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
ITT01_0005_E02.b : GGAAGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
KDN01_0072_G02.b : GGAGGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
THY01_0098_B11.b : GGAAGAACTGCAGCTCCTGCTCACTGAAGGCAAAGCCTGGGAGAAATTTGTGACTGAGGC
UTR01_0088_C06.b :
20110601C-003599 : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTGGAAACAGA
---------+---------+---------+---------+---------+---------+ 420
PST01_0076_D09.b : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTGGAAACAGA
MLN01_0029_E10.b : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTGGAAACAGA
OVRT1_0023_F03.b : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTGGAAACAGA
LNG01_0005_D01.b : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTGGAAACAGA
ITT01_0035_H06.b : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTAGAAACAGA
ITT01_0005_E02.b : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTGGAAACAGA
KDN01_0072_G02.b : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTGGAAACAGA
THY01_0098_B11.b : TGATTTGTCCAGGGAAGAGGCAGATGCACTGCGTGAGTATCTGAAGGAGCTGGAAACAGA
UTR01_0088_C06.b : nnngggctaggactatgacagtt
20110601C-003599 : CTTGGCCTTGGAGGACAAAGACTCCCTCCTACAAGACCAGCTGGAGAGAACGAGGTTTTT
---------+---------+---------+---------+---------+---------+ 480
PST01_0076_D09.b : CTTGGCCTTGGAGGACAAAGACTCCCTCCTACAAGACCAGCTGGAGAGAACGAGGTTTTT
MLN01_0029_E10.b : CTTGGCCTTGGAGGACAAAGACTTCCTCCTACAAGACCAGCTGGAGAGAACGAGGTTTTT
OVRT1_0023_F03.b : CTTGGCCTTGGAGGACAAAGACTCCCTCCTACAAGACCAGCTGGAGAGAACGAGGTTTTT
LNG01_0005_D01.b : CTTGGCCTTGGAGGACAAAGACTCCCTCCTACAAGACCAGCTGGAGAGAACGAGGTTTTT
ITT01_0035_H06.b : CTTGGCCTTGGAGGACAAAGACTCCCTCCTACAAGACCAGCTGGAGAAAACGAGGTTTTT
ITT01_0005_E02.b : CTTGGCCTTGGAGGACAAAGACTCCCTCCTACAAGACCAGCTGGAGAGAACGAGGTTTTT
KDN01_0072_G02.b : CTTGGCCTTGGAGGACAAAGACTCCCTCCTACAAGACCAGCTGGAGAGAACGAGGTTTTT
THY01_0098_B11.b : CTTGGCCTTGGAGGACAAAGACTCCCTCCTACAAGACCAGCTGGAGAGAACGAGGTTTTT
UTR01_0088_C06.b : tgtacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgTTT
20110601C-003599 : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
---------+---------+---------+---------+---------+---------+ 540
PST01_0076_D09.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
MLN01_0029_E10.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
OVRT1_0023_F03.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
LNG01_0005_D01.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
ITT01_0035_H06.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
ITT01_0005_E02.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
KDN01_0072_G02.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
THY01_0098_B11.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
UTR01_0088_C06.b : GCAGGAGTTTCCCCGAGTGAAACTGGAGATCGAGGCGCAAATAGGAAAGCTGCATGCGCT
20110601C-003599 : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
---------+---------+---------+---------+---------+---------+ 600
PST01_0076_D09.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
MLN01_0029_E10.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
OVRT1_0023_F03.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
LNG01_0005_D01.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
ITT01_0035_H06.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
ITT01_0005_E02.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
KDN01_0072_G02.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
THY01_0098_B11.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
UTR01_0088_C06.b : TGCGGCCAAGGTTGACAAGGTGCACAGGGACTGCACCATCTCCAACGTGGTGGCCACCTC
20110601C-003599 : CACCGGTGCTGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
---------+---------+---------+---------+---------+---------+ 660
PST01_0076_D09.b : CACCGGTGCTGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
MLN01_0029_E10.b : CACCGGTGCTGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
OVRT1_0023_F03.b : CACCGGTGCTGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
LNG01_0005_D01.b : CACCGGTGCTGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
ITT01_0035_H06.b : CACCGGTGCCGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
ITT01_0005_E02.b : CACCGGTGCTGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
KDN01_0072_G02.b : CACCGGTGCTGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
THY01_0098_B11.b : CACCGGTGCTGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
UTR01_0088_C06.b : CACCGGTGCCGCGTCTGGCATCCTGACCGTTCTTGGTCTGGCTCTGGCACCCGTGACAGC
20110601C-003599 : AGGGTTCAGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
---------+---------+---------+---------+---------+---------+ 720
PST01_0076_D09.b : AGGGTTCAGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
MLN01_0029_E10.b : AGGGTTCAGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
OVRT1_0023_F03.b : AGGGTTCAGTCTGGCACTCTCTGCCACTGGATTAGGGCTGGGAGTAGCGGCTTCTGTGAC
LNG01_0005_D01.b : AGGGTTCAGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
ITT01_0035_H06.b : AGGGTTCAGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
ITT01_0005_E02.b : AGGGTTCAGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
KDN01_0072_G02.b : AGGGTTCAGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
THY01_0098_B11.b : AGGGTTCGGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
UTR01_0088_C06.b : AGGGTTCAGTCTGGCACTCTCTGCCACTGGGTTAGGGCTGGGAGTAGCGGCTTCTGTGAC
20110601C-003599 : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
---------+---------+---------+---------+---------+---------+ 780
PST01_0076_D09.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
MLN01_0029_E10.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
OVRT1_0023_F03.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
LNG01_0005_D01.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
ITT01_0035_H06.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
ITT01_0005_E02.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
KDN01_0072_G02.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
THY01_0098_B11.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
UTR01_0088_C06.b : TGGTGTGTCCGCCAGCATTGTGGACAAGGTCAACAGTTCATTAGCAGAAAGAGAAGCCAG
20110601C-003599 : TCGCCTCATGTCCACCAGCTTCAACAAAGCGGAGGTGATTTCAGAGTCTCTGGGCAAGAG
---------+---------+---------+---------+---------+---------+ 840
PST01_0076_D09.b : TCGCCTCATGTCCACCAGCTTCAACAAAGCGGAGGTGATTTCAGAGTCTCTGGGCAAGAG
MLN01_0029_E10.b : TCGCCTCATGTCCACCAGCTTTCAACAAGCGGAGGTGATTTCAGAGTCTCTGGGGCAGAG
OVRT1_0023_F03.b : TCGCCTCATGTCCACCAGCTTTCACAAAGCGGAAGTGATTTCAGAGTCTCTGGGCAAGAG
LNG01_0005_D01.b : TCGCCTCATGTCCACCAGCTTCAACAAAGCGGAGGTGATTTCAGAGTCTCTGGGCAAGAG
ITT01_0035_H06.b : TCGCCTCATGTCCACCAGCTTCAACAAAGCGGAGGTGATTTCAGAGTCTCTGGGCGAGAG
ITT01_0005_E02.b : TCGCCTCATGTCCACCAGCTTCAACAAAGCGGAGGTGATTTCAGAGTCTCTGGGNCAGAG
KDN01_0072_G02.b : TCGCCTCATGTCCACCAGCTTCAACAAAGCGGAGGTGATTTCAGAGTCTCTGGGCAAGAG
THY01_0098_B11.b : TCGCCTCATGTCCACCAGCTTCAACAAAGCGGAGGTGATTTCAGAGTCTCTGGGCAAGAG
UTR01_0088_C06.b : TCGCCTCATGTCCACCAGCTTCAACAAAGCGGAGGTGATTTCAGAGTCTCTGGGCGAGAG
20110601C-003599 : CACACCCCAAATTGTGTCCTTAACAAAGAATTTCATCCAAGGCTTGCCACGCATTGGGAA
---------+---------+---------+---------+---------+---------+ 900
PST01_0076_D09.b : CACACCCCAAATTGTGTCCTTAACAAAGAATTTCATCCAAGGCTTGCCACGCATTTGGGA
MLN01_0029_E10.b : CACACCCCAAATTGTGTCCTTAACAAAAAAATTCATCCCAGGGCTGCCACGCATTGGGAA
OVRT1_0023_F03.b : CACACCCCAAATTGTGTCCTTTACAAAGA*TTTCATCCAAGGCTTTGCACGCATTTGGGA
LNG01_0005_D01.b : CACACCCCAAATTGTGTCCTTAACAAAGAATTTCATCCNAGGCTTGCCACGCATTGGGAA
ITT01_0035_H06.b : CACACCCCCAATTGTGTCCCTTACAAAGAATTTCATCCAAGCCTTGC*ACGCATTGGGAA
ITT01_0005_E02.b : CACACCCCAAATTGTGTCCTTAACAAAGAATTTCATCCANGGCTTGCCACGCATTGGGAA
KDN01_0072_G02.b : CACACCCCAAATTGTGTCCTTAACAAAGAATTTCATCCAAGGCTTGCCACGCATTGGGAA
THY01_0098_B11.b : CACACCCCAAATTGTGTCCTTAACAAAGAATTTCATCCAAGGCTTGCCACGCATTGGGAA
UTR01_0088_C06.b : CACACCCCAAATTGTGTCCTTAACAAAGAATTTCATCCAAGGCTTGCCACGCATTGGGAA
20110601C-003599 : GAATATCCGGGCCATCAAGCTGGCCAAAGCCAACCCTCGCTTAGCAGCCAATGCCAAGCG
---------+---------+---------+---------+---------+---------+ 960
PST01_0076_D09.b : GAATATCCGGGGCATCAAGCTGGGCAAAGCCAACCCTCGCTTANCAGGCAATGCCAAGCG
MLN01_0029_E10.b : GAATATCCCGGCCCATCAGCTGGGCAAAGCCAACCCTCGCTTAACAGCCAATGCCAAGCG
OVRT1_0023_F03.b : GAATATCCGGGCCATNCAGCTGGCCAAAGCCAACCCTCGCTTTAGCAGCAATGCCAAGCG
LNG01_0005_D01.b : GAAATATCGGGNCCATCAGCTGGCCAAAGCCAACCCTCGCTTAGCAGCCAATGCCAAGCG
ITT01_0035_H06.b : GAATATCCCGGCCATCAAGCTGGCCAAAGCCAACCtccccttacaaccaatgcccagcgc
ITT01_0005_E02.b : GAAATATCGGGCCATCAAGCTGGCCAAAGCCAACCCTCGCTTAGCAGCCNATGCCAAGCG
KDN01_0072_G02.b : GAATATCCGGGCCATCAAGCTGGCCAAAGCCAACCCTCGCTTAGCAGCCAATGCCAAGCG
THY01_0098_B11.b : GAATATCCGGGCCATCAAGCTGGCCAAAGCCAACCCTCGCTTAGCAGCCAATGCCAAGCG
UTR01_0088_C06.b : GAATATCCGGGCCATCAAGCTGGCCAAAGCCAACCCTCGCTTAGCAGCCAATGCCAAGCG
20110601C-003599 : CTTCATGACCGCTGGGCAAGTCTCAGTTCGAAACAGAAGGCTGGTGAAGAAAACGTTTGA
---------+---------+---------+---------+---------+---------+ 1020
PST01_0076_D09.b : CTTCATGACCGCTGGGCAAGTCTCAATTCGAAcaaaaggctggtgagaaaacgtttgagg
MLN01_0029_E10.b : CTTCATGACCGCTGGGCAAGTCTCATTTCCAAACAaaagctggtgagaaaacgtttgaag
OVRT1_0023_F03.b : CTTtcatgacgctgggcaagtctcagtttcgaaacagaaggctggtgaagaaaacgtttg
LNG01_0005_D01.b : CTTCATGACCGCTGGGCAAGTCTCAGTTCGAAACAGAGGGCTGGTGGAGAAAAacgtttg
ITT01_0035_H06.b : ttctgaccccttggcaagtctcatttcaaacaaaaggctgggaaaaaaactttggaaggg
ITT01_0005_E02.b : CTTCATGACCGCTGGGGCAGTCTCAGTTCGAAACAGAAGGCTGGTGAAAGAAAACGTTGA
KDN01_0072_G02.b : CTTCATGACCGCTGGGGCAGTCTCAGTTCGAAACAGAAAGCTGGTGAAAAAAACGTTTGA
THY01_0098_B11.b : CTTCATGACCGCTGGGCAAGTCTCAGTTCGAAACAGAAGGCTGGTGAAGAAAACGTTTGA
UTR01_0088_C06.b : CTTCATGACCGCTGGGCAAGTCTCAGTTCGAAACAGAAGGCTGGTGAAGAAAACGTTTGA
20110601C-003599 : AGGGACAGTTCTGGCAATGACCAAAAATGCCCGGATCATCGGTATGGCTACTGCAGGTGT
---------+---------+---------+---------+---------+---------+ 1080
PST01_0076_D09.b : aacagtctgcaatgaccaaaatgcccggatcatcggtaggctactgcagtggtgccctct
MLN01_0029_E10.b : gaacgttctggcatgaacaaaatgcccggattctcggtttggctctgccggggttgccct
OVRT1_0023_F03.b : aaaggacagttctgggcatgacaaaatgcccggatcatcgaatgcctactgcagggttgc
LNG01_0005_D01.b : aaggggacagttctgggcaatgaccaaaaaatgcccgggatcatcggtatgggcttactg
ITT01_0035_H06.b : acaattctggcatgaccaaaaatgcccggattatcggtaggccccggcaggggttgccct
ITT01_0005_E02.b : AGGGACAGTTCTGGGCATGACCA*AAATGCCCGGATCATCCGTATGGCTACTGCAGGTGT
KDN01_0072_G02.b : AGGGACAGTTCTGGCAATGACCA*AAATGCCCGGATCATCGGTATGGCTACTGCANGTGG
THY01_0098_B11.b : AGGGACAGTTCTGGCAATGACCAAAAATGCCCGGATCATCGGTATGGCTACTGCAGGTGT
UTR01_0088_C06.b : AGGGACAGTTCTGGCAATGACCAAAAATGCCCGGATCATCGGTATGGCCACTGCAGGTGT
20110601C-003599 : TGCCCTTCTGATGGACGTGGGCTTCCTGGTGAAAGAGTCAATCCACTTGCAGCAGGGGGC
---------+---------+---------+---------+---------+---------+ 1140
PST01_0076_D09.b : gatgcagtgggctcctggtgaagagtcatcacttgcccaggggcaaagcaaatcacaaaa
MLN01_0029_E10.b : tctaaggacgggggcttcctgggaaggagtcaacccctttccccgggggcaaaggcaatt
OVRT1_0023_F03.b : ctttctgaggacgtgggcttctgggaaagaacaatccctgcgccgggggcaaggcaatct
LNG01_0005_D01.b : gcaggtgttggccctttctggatgggacggtggggctttccttccggggaaaagaattcc
ITT01_0035_H06.b : ctgaaggaaggggccccctggtgaaaaattcatcccttgcccccggggccaaggcaaatc
ITT01_0005_E02.b : TGCCCT*CTGATGNACGTGGGCTTCCTGGTGAAAGAGTCAtcactttgcacagggggcaa
KDN01_0072_G02.b : TGGCCTTCTGATGGACGTGGGCcccttcgtgaaaaagtcattccactgcagcagggggca
THY01_0098_B11.b : TGCCCTTCTGATGGACGTGGGCTTCCTCGTGAAAGAGTCAATCCACTTGCAGCAGGGGGC
UTR01_0088_C06.b : TGCCCTTCTGATGGACGTGGGCTTCCTGGTGAAAGAGTCAATCCACTTGCAGCAGGGGGC
20110601C-003599 : AAAGGCAGAGTCAGCAGAAAGGCTGAGACAGCAGGCCCAGGAGCTGGAGAAGAAGCTGGA
---------+---------+---------+---------+---------+---------+ 1200
PST01_0076_D09.b : aactgaacaacggcccagactggaaaaagctggagacttaccggatcttgaaatcgcgta
MLN01_0029_E10.b : ccccaaaaggctgaaacccggcccagaacctggaaaaacctggagaacttcccgatttta
OVRT1_0023_F03.b : cccaaaggctaaaccccggccaggactggaaaaaccgggggacttcccggtctttgaatc
LNG01_0005_D01.b : aatcccacttttgccagccaggggggggga
ITT01_0035_H06.b : ccccaaaaggcttaaaccccgggcccgaacctggaaaaaaacgggggaacctccccgatt
ITT01_0005_E02.b : ggccgantcaccaaaaagctgaaacaccggcccaggactggaaaaaactgaaggacttac
KDN01_0072_G02.b : aaggcaaagtcacccaaaagctgaaaacgccggcccaggaacgggaaaaaagctggagaa
THY01_0098_B11.b : AAAGGCAGAGTCAGCAGAAAAGCTGAGACAGCAGGCCCAGGAGCTGGAGA*GAAGCTGGA
UTR01_0088_C06.b : AAAGGCAGAGTCAGCAGAAAGGCTGAGACAGCANGCCCAGGAGCTGGAGAAGAAGCTGGA
20110601C-003599 : GGAGCTCACCAGGATCTATGAGAGTCTGCAGTAAGGCCTGAGTCCGCCACCCCCAGAGCA
---------+---------+---------+---------+---------+---------+ 1260
PST01_0076_D09.b : ggctgacccccaccccagaagggaaaaacttcggggcaacccatggtcttgggcaaaaac
MLN01_0029_E10.b : aaacttcggtaggccgatctcccccccccaaaattggaaaacttccgggccaaccattgt
OVRT1_0023_F03.b : tgcttatgccggacccccccccaaaagtgaaaaacctcgggccaacacagggactgtggg
LNG01_0005_D01.b :
ITT01_0035_H06.b : tttaaaattccctnaaggcctgaaccccccccccaaaaatgaaaaaaccttggggccaac
ITT01_0005_E02.b : aggattctgaaattggcggtaggctgaccgccaccccaacattgcaaaacttcggggcaa
KDN01_0072_G02.b : ccttacaggatctattgaaatctgcgtagggcctaactccccacccccaaacagggacaa
THY01_0098_B11.b : GGAGCTTAC*AGGATCTATGAGAATCTGCAGTAAGGCCTGACTCCGCCCCCCCagaagcg
UTR01_0088_C06.b : GGAGCTCACCAGGATCTATGAGAGTCTGCAGTAAGGCCTGAGTCCGCCACCCCCAGAGCA
20110601C-003599 : GTGCAGAGACACGTCCGGGGCCAACACGCAGTGGTACCTTTGGAGCAAAGAGACGTGGAC
---------+---------+---------+---------+---------+---------+ 1320
PST01_0076_D09.b : tgaaaaaattaaaaggggaacgaaggctccgaacttttggatttggaaaaccttcccaaa
MLN01_0029_E10.b : ccctggagaaaaacggaaaaaaattatatgggaaaccacagccctct
OVRT1_0023_F03.b : aaaaacgggacaaagaaaagggagggaggggcccaacccttgtttttgtgaagccctcca
LNG01_0005_D01.b :
ITT01_0035_H06.b : ccctgtgtccttggggaaaaactggaaaaaaagaaaagggggaggaaggggccctcaact
ITT01_0005_E02.b : aaccctgtccttgaggcagaaactgaataaggaaaaagggaaacgaacggccctgaacct
KDN01_0072_G02.b : aaccttccggggcccacccagtggctcctggaggcaaaaacgggacttaaggataaagtg
THY01_0098_B11.b : tgcagaaacaccttccggggccaacccccatgggtaccttggagggaaagaaacgt
UTR01_0088_C06.b : GTGCAGAGACACGTCCGGGGCCAACACGCAGTGGTACCTTTGGAGCAAAGAGACGTGGAC
20110601C-003599 : ATAAAATGATAAAAGTGGGGAAGCTGAGCTAGTCTCTCTGACTCCTCTTTTGGTCTATTT
---------+---------+---------+---------+---------+---------+ 1380
PST01_0076_D09.b : gaaaataaccctaaataaaaactttttccgaatccctt
MLN01_0029_E10.b :
OVRT1_0023_F03.b : gaagaaaaacacgaaaagaattttcctaaatccttggtgaaaccacccgttatataaaaa
LNG01_0005_D01.b :
ITT01_0035_H06.b : ctttggggttttggggaacgcctccccaaaaagaactaaccccaaaaaaatagtttttcc
ITT01_0005_E02.b : cttggcattttggaaggctttcacaaaaaaattaccccaaacacaagaatttctcgaatt
KDN01_0072_G02.b : ggggactggacgggccccggaccctttttggctttttcgggaaaggcgttccccaaaaaa
THY01_0098_B11.b :
UTR01_0088_C06.b : ATAAAATGATAAAAGTGGGGAAGCTGAGCTAGTCTCTCTGACTCCTCTTTTGGTCTATTT
20110601C-003599 : TCT.........................................................
---------+---------+---------+---------+---------+---------+ 1383
PST01_0076_D09.b :
MLN01_0029_E10.b :
OVRT1_0023_F03.b : aatcttcttttaaaa
LNG01_0005_D01.b :
ITT01_0035_H06.b :
ITT01_0005_E02.b : ccccggg
KDN01_0072_G02.b : aaatttaacctttaa
THY01_0098_B11.b :
UTR01_0088_C06.b : TCTggactatgccgntttcccagaagatgagaaatctgaaaccttcgaaaattcaaagat
20110601C-003599 : ............................................................
---------+---------+---------+---------+---------+---------+ 1383
PST01_0076_D09.b :
MLN01_0029_E10.b :
OVRT1_0023_F03.b :
LNG01_0005_D01.b :
ITT01_0035_H06.b :
ITT01_0005_E02.b :
KDN01_0072_G02.b :
THY01_0098_B11.b :
UTR01_0088_C06.b : gtcattttcttccctgaaattcttcctcttggcttgatgagtcccaaacttcagccccat
20110601C-003599 : ............................................................
---------+---------+---------+---------+---------+---------+ 1383
PST01_0076_D09.b :
MLN01_0029_E10.b :
OVRT1_0023_F03.b :
LNG01_0005_D01.b :
ITT01_0035_H06.b :
ITT01_0005_E02.b :
KDN01_0072_G02.b :
THY01_0098_B11.b :
UTR01_0088_C06.b : gttgaaaaattatttccaaaaagttagaaataacgtccaccttttccgtttggccttcaa
20110601C-003599 : ............................................................
---------+---------+---------+---------+---------+---------+ 1383
PST01_0076_D09.b :
MLN01_0029_E10.b :
OVRT1_0023_F03.b :
LNG01_0005_D01.b :
ITT01_0035_H06.b :
ITT01_0005_E02.b :
KDN01_0072_G02.b :
THY01_0098_B11.b :
UTR01_0088_C06.b : aaaaaaaaaaaaaggccacatggcctcaaacttcaggtccggccccc