Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-003643

Sequence: [FASTA format sequence] GCTGGTCGGT TGGGCAGTGT AAGTGTGGCT GGGGGTGAAT GTTGAGGCCT TGTTTCCCGC CGGCCCATGG AGTCCAAAAC TACCTACCTG GAAGACCTGC CACCTCTCCC TGAGTATGAA CTGCCTCCGT CCAAGTTAGG AGAGGAAGTG GATGATGTTT ATCTCATTCG AGCTCAAGGA TTGCCGTGGT CGTGCACAGT GGAAGATGTG CTTAGCTTTT TCTCAGACTG CAGAATTCGA AATGGTGAGA ATGGAATCCA CTTCCTTTTA AATAGAGATG GGAAACGAAG AGGTGATGCC TTAATTGAAA TGGAGTCAGA GCAGGACGTG CAAAAAGCCT TAGAAAAACA CCGTATGTAC ATGGGACAGC GGTATGTGGA AGTATATGAG ATAAATAATG AAGATGTGGA TGCCTTAATG AAGAACCTGC ATGTCAAATC TACACCTGTG GTGAATGATG GTGTGGTTCG TTTGAGAGGA CTTCCTTATA GTTGCAATGA AAAAGATATT GTAGACTTCT TCGCAGGGCT GCATATAGTA GACATTACGT TTGTCATGGA TTACAGAGGG AGAAGAAAAA CAGGAGAAGC CTACGTGCAG TTTGAAGAAC CAGAAATGGC CAACCAAGCC CTGTTGAAAC ACAGGGAAGA AATTGGTAAC CGATATATAG AGATATTTCC AAGCAGAAGG AATGAAGTTC GAACACATGT TGGTTCTCAT AAGGGAAAGA AAATGGCCTC TTCTCCCACT GCTAAGTACA TAACTGAGCC AGAAATGGCC TTTGAAGAAG AAGTAAATGA GGATGTCCGA CCCATGACAG CTTTTGAAAG TGAAAAGGAA ATAGAATTGC CTAAGGAGAT GTCAGAAAAG CTTCCAGAGG CTGTTGATTT TGGAACTACA TCTTCATTAC ATTTTGTCCA CATGAGAGGA TTGCCTTTCC AAGCCAATGC CCAAGACATT ATAAATTTTT TTGCTCCACT GAAGCCTGTT AGAATCACCA TGGAATATAG CTCCAGTGGG AAGGCCACTG GAGAAGCTGA TGTGCACTTC GAGACCCCAT GAGATGCTGT GGCAGCTATG CTCAAGG

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
GRSF1 G-rich sequence factor 1 isoform 1 [Homo sapiens]. 603 e-173

GRSF1 G-rich sequence factor 1 isoform 2 [Homo sapiens]. 557 e-159 O

HNRNPF heterogeneous nuclear ribonucleoprotein F [Homo sapiens]. 234 8e-62 O

HNRNPF heterogeneous nuclear ribonucleoprotein F [Homo sapiens]. 234 8e-62 O

HNRNPF heterogeneous nuclear ribonucleoprotein F [Homo sapiens]. 234 8e-62 O

HNRNPF heterogeneous nuclear ribonucleoprotein F [Homo sapiens]. 234 8e-62 O

HNRNPF heterogeneous nuclear ribonucleoprotein F [Homo sapiens]. 234 8e-62 O

HNRNPF heterogeneous nuclear ribonucleoprotein F [Homo sapiens]. 234 8e-62 O

HNRNPH1 heterogeneous nuclear ribonucleoprotein H [Homo sapiens]. 203 2e-52 O

HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 [Homo sapiens]. 200 2e-51 O

Locus	Definition	Score	E value	FL
GRSF1	G-rich sequence factor 1 isoform 1 [Homo sapiens].	603	e-173
GRSF1	G-rich sequence factor 1 isoform 2 [Homo sapiens].	557	e-159	O
HNRNPF	heterogeneous nuclear ribonucleoprotein F [Homo sapiens].	234	8e-62	O
HNRNPF	heterogeneous nuclear ribonucleoprotein F [Homo sapiens].	234	8e-62	O
HNRNPF	heterogeneous nuclear ribonucleoprotein F [Homo sapiens].	234	8e-62	O
HNRNPF	heterogeneous nuclear ribonucleoprotein F [Homo sapiens].	234	8e-62	O
HNRNPF	heterogeneous nuclear ribonucleoprotein F [Homo sapiens].	234	8e-62	O
HNRNPF	heterogeneous nuclear ribonucleoprotein F [Homo sapiens].	234	8e-62	O
HNRNPH1	heterogeneous nuclear ribonucleoprotein H [Homo sapiens].	203	2e-52	O
HNRNPH2	heterogeneous nuclear ribonucleoprotein H2 [Homo sapiens].	200	2e-51	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Grsf1 G-rich sequence factor 1 isoform 2 [Mus musculus]. 602 e-172 O

Grsf1 G-rich sequence factor 1 isoform 1 [Mus musculus]. 600 e-172

Hnrnpf heterogeneous nuclear ribonucleoprotein F [Mus musculus]. 230 2e-60 O

Hnrnpf heterogeneous nuclear ribonucleoprotein F [Mus musculus]. 230 2e-60 O

Hnrnpf heterogeneous nuclear ribonucleoprotein F [Mus musculus]. 230 2e-60 O

Hnrnpf heterogeneous nuclear ribonucleoprotein F [Mus musculus]. 230 2e-60 O

Hnrnpf heterogeneous nuclear ribonucleoprotein F [Mus musculus]. 230 2e-60 O

Hnrnpf heterogeneous nuclear ribonucleoprotein F [Mus musculus]. 230 2e-60 O

Hnrnpf heterogeneous nuclear ribonucleoprotein F [Mus musculus]. 230 2e-60 O

Hnrnph1 heterogeneous nuclear ribonucleoprotein H [Mus musculus]. 203 2e-52 O

Locus	Definition	Score	E value	FL
Grsf1	G-rich sequence factor 1 isoform 2 [Mus musculus].	602	e-172	O
Grsf1	G-rich sequence factor 1 isoform 1 [Mus musculus].	600	e-172
Hnrnpf	heterogeneous nuclear ribonucleoprotein F [Mus musculus].	230	2e-60	O
Hnrnpf	heterogeneous nuclear ribonucleoprotein F [Mus musculus].	230	2e-60	O
Hnrnpf	heterogeneous nuclear ribonucleoprotein F [Mus musculus].	230	2e-60	O
Hnrnpf	heterogeneous nuclear ribonucleoprotein F [Mus musculus].	230	2e-60	O
Hnrnpf	heterogeneous nuclear ribonucleoprotein F [Mus musculus].	230	2e-60	O
Hnrnpf	heterogeneous nuclear ribonucleoprotein F [Mus musculus].	230	2e-60	O
Hnrnpf	heterogeneous nuclear ribonucleoprotein F [Mus musculus].	230	2e-60	O
Hnrnph1	heterogeneous nuclear ribonucleoprotein H [Mus musculus].	203	2e-52	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC475170 PREDICTED: similar to G-rich RNA sequence binding factor 1 [Canis familiaris]. 618 e-177 O

LOC481455 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 14 [Canis familiaris]. 258 7e-69 O

LOC480989 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) (FTP-3) isoform 5 [Canis familiaris]. 254 1e-67 O

LOC481455 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 15 [Canis familiaris]. 253 3e-67 O

LOC480989 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) (FTP-3) isoform 6 [Canis familiaris]. 249 4e-66 O

LOC481455 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 2 [Canis familiaris]. 203 2e-52 O

LOC481455 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 19 [Canis familiaris]. 203 2e-52 O

LOC481455 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 17 [Canis familiaris]. 203 2e-52 O

LOC481455 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 18 [Canis familiaris]. 203 2e-52 O

LOC481455 PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 3 [Canis familiaris]. 203 2e-52 O

Locus	Definition	Score	E value	FL
LOC475170	PREDICTED: similar to G-rich RNA sequence binding factor 1 [Canis familiaris].	618	e-177	O
LOC481455	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 14 [Canis familiaris].	258	7e-69	O
LOC480989	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) (FTP-3) isoform 5 [Canis familiaris].	254	1e-67	O
LOC481455	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 15 [Canis familiaris].	253	3e-67	O
LOC480989	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) (FTP-3) isoform 6 [Canis familiaris].	249	4e-66	O
LOC481455	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 2 [Canis familiaris].	203	2e-52	O
LOC481455	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 19 [Canis familiaris].	203	2e-52	O
LOC481455	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 17 [Canis familiaris].	203	2e-52	O
LOC481455	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 18 [Canis familiaris].	203	2e-52	O
LOC481455	PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) isoform 3 [Canis familiaris].	203	2e-52	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
GRSF1 G-rich sequence factor 1 [Bos taurus]. 619 e-177

HNRNPF heterogeneous nuclear ribonucleoprotein F [Bos taurus]. 236 3e-62 O

HNRNPH1 PREDICTED: heterogeneous nuclear ribonucleoprotein H1 (H) [Bos taurus]. 203 2e-52 O

HNRNPH1 heterogeneous nuclear ribonucleoprotein H [Bos taurus]. 203 2e-52 O

HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 [Bos taurus]. 199 3e-51 O

ESRP1 PREDICTED: epithelial splicing regulatory protein 1 [Bos taurus]. 126 3e-29

ESRP1 epithelial splicing regulatory protein 1 [Bos taurus]. 126 3e-29

LOC788414 PREDICTED: RNA binding motif protein 35A [Bos taurus]. 125 7e-29

LOC788414 PREDICTED: fusilli-like [Bos taurus]. 125 7e-29

ESRP2 epithelial splicing regulatory protein 2 [Bos taurus]. 121 9e-28

Locus	Definition	Score	E value	FL
GRSF1	G-rich sequence factor 1 [Bos taurus].	619	e-177
HNRNPF	heterogeneous nuclear ribonucleoprotein F [Bos taurus].	236	3e-62	O
HNRNPH1	PREDICTED: heterogeneous nuclear ribonucleoprotein H1 (H) [Bos taurus].	203	2e-52	O
HNRNPH1	heterogeneous nuclear ribonucleoprotein H [Bos taurus].	203	2e-52	O
HNRNPH2	heterogeneous nuclear ribonucleoprotein H2 [Bos taurus].	199	3e-51	O
ESRP1	PREDICTED: epithelial splicing regulatory protein 1 [Bos taurus].	126	3e-29
ESRP1	epithelial splicing regulatory protein 1 [Bos taurus].	126	3e-29
LOC788414	PREDICTED: RNA binding motif protein 35A [Bos taurus].	125	7e-29
LOC788414	PREDICTED: fusilli-like [Bos taurus].	125	7e-29
ESRP2	epithelial splicing regulatory protein 2 [Bos taurus].	121	9e-28

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100516986 PREDICTED: g-rich sequence factor 1-like [Sus scrofa]. 634 0.0

HNRNPF PREDICTED: heterogeneous nuclear ribonucleoprotein F [Sus scrofa]. 239 3e-63 O

HNRNPF PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 [Sus scrofa]. 239 3e-63 O

HNRNPH1 PREDICTED: heterogeneous nuclear ribonucleoprotein H [Sus scrofa]. 203 1e-52 O

LOC100627585 PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Sus scrofa]. 182 2e-46 O

LOC100512961 PREDICTED: epithelial splicing regulatory protein 1-like isoform 2 [Sus scrofa]. 126 2e-29

LOC100512961 PREDICTED: epithelial splicing regulatory protein 1-like isoform 1 [Sus scrofa]. 126 2e-29

HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 [Sus scrofa]. 98.6 5e-21 O

RBM12 PREDICTED: RNA-binding protein 12 [Sus scrofa]. 88.2 7e-18

RBM12B PREDICTED: RNA-binding protein 12B [Sus scrofa]. 76.6 2e-14

Locus	Definition	Score	E value	FL
LOC100516986	PREDICTED: g-rich sequence factor 1-like [Sus scrofa].	634	0.0
HNRNPF	PREDICTED: heterogeneous nuclear ribonucleoprotein F [Sus scrofa].	239	3e-63	O
HNRNPF	PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 [Sus scrofa].	239	3e-63	O
HNRNPH1	PREDICTED: heterogeneous nuclear ribonucleoprotein H [Sus scrofa].	203	1e-52	O
LOC100627585	PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Sus scrofa].	182	2e-46	O
LOC100512961	PREDICTED: epithelial splicing regulatory protein 1-like isoform 2 [Sus scrofa].	126	2e-29
LOC100512961	PREDICTED: epithelial splicing regulatory protein 1-like isoform 1 [Sus scrofa].	126	2e-29
HNRNPH3	heterogeneous nuclear ribonucleoprotein H3 [Sus scrofa].	98.6	5e-21	O
RBM12	PREDICTED: RNA-binding protein 12 [Sus scrofa].	88.2	7e-18
RBM12B	PREDICTED: RNA-binding protein 12B [Sus scrofa].	76.6	2e-14

Assembly Members: 5 TOP

Library Plate Loc. Read Name Accession Full Seq.

CBLT1 0024 G03 CBLT1_0024_G03.b HX213541
DCI01 0057 E12 DCI01_0057_E12.b DB794652
HTMT1 0097 G11 HTMT1_0097_G11.b FS671097 AK392743
LVR01 0089 A01 LVR01_0089_A01.b CJ000508
SKNB1 0095 A09 SKNB1_0095_A09.b DB805688

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
448 A 2 0 0.500 W N ATG/M
G 2 0 0.500 GTG/V

Alignment: TOP

20110601C-003643 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
HTMT1_0097_G11.b :                                               ttttggacggtaag
SKNB1_0095_A09.b :                                                             
CBLT1_0024_G03.b :                                 nnttgcgacggtacacgccxxxxxxxxx
LVR01_0089_A01.b : gggctttggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0057_E12.b :                                                             


20110601C-003643 : ..............................................GCTGGTCGGTTGGG
                   ---------+---------+---------+---------+---------+---------+ 14
HTMT1_0097_G11.b : aggccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCTGGTCGGTTGGG
SKNB1_0095_A09.b :                      ccccgttggctctggatttcccagttCTGGTCCGTTGGG
CBLT1_0024_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgctcttctcgagtctctggtcggttggg
LVR01_0089_A01.b : xxxxxxxxxxxxxxxxxxxxxxxxxgttttgttctcttctcgagtctctggtcggttggg
DCI01_0057_E12.b :                                                             


20110601C-003643 : CAGTGTAAGTGTGGCTGGGGGTGAATGTTGAGGCCTTGTTTCCCGCCGGCCCATGGAGTC
                   ---------+---------+---------+---------+---------+---------+ 74
HTMT1_0097_G11.b : CAGTGTAAGTGTGGCTGGGGGTGAATGTTGAGGCCTTGTTTCCCGCCGGCCCATGGAGTC
SKNB1_0095_A09.b : CACTGTAAGTGTGGCTGGGGGTGAATGTTGAGGCCTTGTTTCCCGCCGGCCCCTGGAGTC
CBLT1_0024_G03.b : cagtgtaagtgtggctgggggtgaatgttgaggccttgtttcccgccggcccatGGAGTC
LVR01_0089_A01.b : cagtgtaagtgtggctgggggtgaatgttgaggccttgtttcccgccggcccatGGAGTC
DCI01_0057_E12.b :                                                             


20110601C-003643 : CAAAACTACCTACCTGGAAGACCTGCCACCTCTCCCTGAGTATGAACTGCCTCCGTCCAA
                   ---------+---------+---------+---------+---------+---------+ 134
HTMT1_0097_G11.b : CAAAACTACCTACCTGGAAGACCTGCCACCTCTCCCTGAGTATGAACTGCCTCCGTCCAA
SKNB1_0095_A09.b : CCAAACTACCTACCTGGAAGACCTGCCACCTCTCCCTGAGTATGAACTGCCTCCGTCCCA
CBLT1_0024_G03.b : CAAAACTACCTACCTGGAAGACCTGCCACCTCTCCCTGAGTATGAACTGCCTCCGTCCAA
LVR01_0089_A01.b : CAAAACTACCTACCTGGAAGACCTGCCACCTCTCCCTGAGTATGAACTGCCTCCGTCCAA
DCI01_0057_E12.b :                                                             


20110601C-003643 : GTTAGGAGAGGAAGTGGATGATGTTTATCTCATTCGAGCTCAAGGATTGCCGTGGTCGTG
                   ---------+---------+---------+---------+---------+---------+ 194
HTMT1_0097_G11.b : GTTAGGAGAGGAAGTGGATGATGTTTATCTCATTCGAGCTCAAGGATTGCCGTGGTCGTG
SKNB1_0095_A09.b : GTTAGGAGAGGAAGTGGATGATGTTTATCTCCTTCCAGCTCAAGGATTGCCGTGGTCCTG
CBLT1_0024_G03.b : GTTAGGAGAGGAAGTGGATGATGTTTATCTCATTCGAGCTCAAGGATTGCCGTGGTCGTG
LVR01_0089_A01.b : GTTAGGAGAGGAAGTGGATGATGTTTATCTCATTCGAGCTCAAGGATTGCCGTGGTCGTG
DCI01_0057_E12.b :                                                             


20110601C-003643 : CACAGTGGAAGATGTGCTTAGCTTTTTCTCAGACTGCAGAATTCGAAATGGTGAGAATGG
                   ---------+---------+---------+---------+---------+---------+ 254
HTMT1_0097_G11.b : CACAGTGGAAGATGTGCTTAGCTTTTTCTCAGACTGCAGAATTCGAAATGGTGAGAATGG
SKNB1_0095_A09.b : CCCAGTGGAAGATGTGCTTAGCTTTTTCTCAGACTGCAGAATTCGAAATGGTGAGAATGG
CBLT1_0024_G03.b : CACAGTGGAAGATGTGCTTAGCTTTTTCTCAGACTGCAGAATTCGAAATGGTGAGAATGG
LVR01_0089_A01.b : CACAGTGGAAGATGTGCTTAGCTTTTTCTCAGACTGCAGAATTCGAAATGGTGAGAATGG
DCI01_0057_E12.b :                                                             


20110601C-003643 : AATCCACTTCCTTTTAAATAGAGATGGGAAACGAAGAGGTGATGC*CTTAATTGAAATGG
                   ---------+---------+---------+---------+---------+---------+ 313
HTMT1_0097_G11.b : AATCCACTTCCTTTTAAATAGAGATGGGAAACGAAGAGGTGATGC*CTTAATTGAAATGG
SKNB1_0095_A09.b : AATCCACTTCCTTTTAAATAGAGATGGGAAACGAAGAGGTGATGCCCTTAATTGAAATGG
CBLT1_0024_G03.b : AATCCACTTCCTTTTAAATAGAGATGGGAAACGAAGAGGTGATGC*CTTAATTGAAATGG
LVR01_0089_A01.b : AATCCACTTCCTTTTAAATAGAGATGGGAAACGAAGAGGTGATGC*CTTAATTGAAATGG
DCI01_0057_E12.b :                                                             


20110601C-003643 : AGTCAGAGCAGGACGTGCAAAAAGCCTTAGAAAAACACCGTATGTACATGGGACAGCGGT
                   ---------+---------+---------+---------+---------+---------+ 373
HTMT1_0097_G11.b : AGTCAGAGCAGGACGTGCAAAAAGCCTTAGAAAAACACCGTATGTACATGGGACAGCGGT
SKNB1_0095_A09.b : AGTCAGAGCAGGACGTGCAAAAAGCCTTAGAAAAACACCGTATGTACATGGGACAGCGGT
CBLT1_0024_G03.b : AGTCAGAGCAGGACGTGCAAAAAGCCTTAGAAAAACACCGTATGTACATGGGACAGCGGT
LVR01_0089_A01.b : AGTCAGAGCAGGATGTGCAAAAAGCCTTAGAAAAACACCGTATGTACATGGGACAGCGGT
DCI01_0057_E12.b :                                                             


20110601C-003643 : ATGTGGAAGTATATGAGATAAATAATGAAGATGTGGATGCCTTAATGAAGAACCTGCATG
                   ---------+---------+---------+---------+---------+---------+ 433
HTMT1_0097_G11.b : ATGTGGAAGTATATGAGATAAATAATGAAGATGTGGATGCCTTAATGAAGAACCTGCATG
SKNB1_0095_A09.b : ATGTGGAAGTATATGAGATAAATAATGAAGATGTGGATGCCTTACTGAAGAACCTGCATG
CBLT1_0024_G03.b : ATGTGGAAGTATATGAGATAAATAATGAAGATGTGGATGCCTTAATGAAGAACCTGCATG
LVR01_0089_A01.b : ATGTGGAAGTATATGAGATAAATAATGAAGATGTGGATGCCTTAATGAAGAACCTGCATG
DCI01_0057_E12.b :                                      gatgatxxxxxxxxxxxxxxxxx


20110601C-003643 : TCAAATCTACACCTGTGGTGAATGATGGTGTGGTTCGTTTGAGAGGACTTCCTTATAGTT
                   ---------+---------+---------+---------+---------+---------+ 493
HTMT1_0097_G11.b : TCAAATCTACACCTATGGTGAATGATGGTGTGGTTCGTTTGAGAGGACTTCCTTATAGTT
SKNB1_0095_A09.b : TCAAATCTACACCTATGGTGAATGATGGTGTGGTTCGTTTGAGAGGACTTCCTTATAGTT
CBLT1_0024_G03.b : TCAAATCTACACCTGTGGTGAATGATGGTGTGGTTCGTTTGAGAGGACTTCCTTATAGTT
LVR01_0089_A01.b : TCAAATCTACACCTGTGGTGAATGATGGTGTGGTTCGTTTGAGAGGACTTCCTTATAGTT
DCI01_0057_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-003643 : GCAATGAAAAAGATATTGTAGACTTCTTCGCAGGGCTGCATATAGTAGACATTACGTTTG
                   ---------+---------+---------+---------+---------+---------+ 553
HTMT1_0097_G11.b : GCAATGAAAAAGATATTGTAGACTTCTTCGCAGGGCTGCATATAGTAGACATTACGTTTG
SKNB1_0095_A09.b : GCAATGAAAAAGATATTGTAGACTTCTTCGCAGGGCTGCATATAGTAGACATTACGTTTG
CBLT1_0024_G03.b : GCAATGAAAAAGATATTGTAGACTTCTTCGCAGGGCTGCATATAGTAGACATTACGTTTG
LVR01_0089_A01.b : GCAATGAAAAAGATATTGTAGACTTCTTCGCAGGGCTGCATATAGTAGACATTACGTTTG
DCI01_0057_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-003643 : TCATGGATTACAGAGGGAGAAGAAAAACAGGAGAAGCCTACGTGCAGTTTGAAGAACCAG
                   ---------+---------+---------+---------+---------+---------+ 613
HTMT1_0097_G11.b : TCATGGATTACAGAGGGAGAAGAAAAACAGGAGAAGCCTACGTGCAGTTTGAAGAACCAG
SKNB1_0095_A09.b : TCATGGATTACAGAGGGAGAAGAAAAACAGGAGAAGCCTACGTGCAGTTTGAAGAACCCG
CBLT1_0024_G03.b : TAATGGATTACAGAGGGAGAAGAAAAACAGGAGAAGCCTACGTGCAGTTTGAAGAACCAG
LVR01_0089_A01.b : TCATGGATTACAGAGGGAGAAGAAAAACAGGAGAAGCCTACGTGCAGTTTGAAGAACCAG
DCI01_0057_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxAAACAGGAGAAGCCTACGTGCAGTTTGAAGAACCAG


20110601C-003643 : AAATGGCCAACCAAGCC*CTGTTGAAACACAGGGAAGAAATTGGTAACCGATATATAGAG
                   ---------+---------+---------+---------+---------+---------+ 672
HTMT1_0097_G11.b : AAATGGCCAACCAAGCC*CTGTTGAAACACAGGGAAGAAATTGGTAACCGATATATAGAG
SKNB1_0095_A09.b : AAATGGCCCACCAAGCCCCTGTTGAAACACAGGGAAGAAATTGGTAACCGATATATAGAG
CBLT1_0024_G03.b : AAATGGCCAACCAAGCC*CTGTTGAAACACAGGGAAGAAATTGGTAACCGATATATAGAG
LVR01_0089_A01.b : AAATGGCCAACCAAGCC*CTGTTGAAACACAGGGAAGAAATTGGTAACCGATATATAGAG
DCI01_0057_E12.b : AAATGGCCAACCAAGCC*CTGTTGAAACACAGGGAAGAAATTGGTAACCGATATATAGAG


20110601C-003643 : ATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTTGGTTCTCATAAGGGAAAGAAA
                   ---------+---------+---------+---------+---------+---------+ 732
HTMT1_0097_G11.b : ATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTTGGTTCTCATAAAGGAAAGAAA
SKNB1_0095_A09.b : ATATTTCCCAGCAGAAGGAATGAAGTTCGAACACATGTTGGTTCTCCTAAGGGAAAGAAA
CBLT1_0024_G03.b : ATATTTCCAAGCAGAAAGAATGAAGTTCGAACACATGTTGGTTCTCATAAAGGAAAAGAA
LVR01_0089_A01.b : ATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTTGGTTCTCATAAGGGAAAGAAA
DCI01_0057_E12.b : ATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTTGGTTCTCATAAGGGAAAGAAA


20110601C-003643 : ATGGCCTCTTCTCCCACTGCTAAGTACATAACTGAGCCAGAAATGGCCTTTGAAGAA***
                   ---------+---------+---------+---------+---------+---------+ 789
HTMT1_0097_G11.b : ATGGCCTCTTCTCCCACTGGCTAGTACATAACTGAACCCAAAATGGCCTTTGAAGAAAAT
SKNB1_0095_A09.b : ATGGCCTCTTCTCCCCCTGCTAAGTACATAACTGAGCCCGAAATGGCCCTTGAAGAA***
CBLT1_0024_G03.b : ATGGCCTCTTCTCCCACTGCTAAGTACATAACTGAGCCAGAAATGGCCTTTGAAGAAAAT
LVR01_0089_A01.b : ATGGCCTCTTCTCCCACTGCTAAGTACATAACTGAGCCAGAAATGGCCTTTGAAGAAAAA
DCI01_0057_E12.b : ATGGCCTCTTCTCCCACTGCTAAGTACATAACTGAGCCAGAAATGGCCTTTGAAGAA***


20110601C-003643 : GAAGTAAATGAGGATGTCCGACCCATGACAGCTTTTGAAAGTGAAAAGGAAATAGAATTG
                   ---------+---------+---------+---------+---------+---------+ 849
HTMT1_0097_G11.b : GAAGTAAATGAGGATGTCCGACCCATGACAGCTTTTGAAAGTGAAAAGGAAATAaaatgg
SKNB1_0095_A09.b : GAAGTAAATGAGGATGTCCCACCCATGACAGCTTTTGAAAGTGAAAAGGAAATAGAATTG
CBLT1_0024_G03.b : GAAGTAAATGAGGATGTCCGACCCATGACAGCTTTTGAAAGTGAAAAGGGAATAAAATTG
LVR01_0089_A01.b : TGAGTAAATGAGGATGTCCGACCCATGACAGCTTTTGAAAGTGAAAAGGAAATAGAATTG
DCI01_0057_E12.b : GAAGTAAATGAGGATGTCCGACCCATGACAGCTTTTGAAAGTGAAAAGGAAATAGAATTG


20110601C-003643 : CCTAAGGAGATGTCAGAAAAGCTTCCAGAGGCTGTTGATTTTGGAACTACATCTTCATTA
                   ---------+---------+---------+---------+---------+---------+ 909
HTMT1_0097_G11.b : cttaaggagatggtcaaaaacttccagaggctgttgattttggaactacatcctcaatta
SKNB1_0095_A09.b : CCtaaggagatgtccgaaaagcttcccgaggctgttgattttggaaactactcttcctta
CBLT1_0024_G03.b : CCTAAGGgagatgtcaaaaaaacttccggaagctgttggatttggaactacatcttcctt
LVR01_0089_A01.b : CCcaaaggagatgtcagaaaagccttccaaaggctggtggatttttgaactacttccttc
DCI01_0057_E12.b : CCTAAGGAGATGTCAGAAAAGCTTCCAGAGGCTGTTGATTTTGGAACTACATCTTCATTA


20110601C-003643 : CATTTTGTCCACATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGACATTATAAATTTT
                   ---------+---------+---------+---------+---------+---------+ 969
HTMT1_0097_G11.b : attttgcccccatgagaagaatgccttttcaagcccatggcccaaaacatttaaaatttt
SKNB1_0095_A09.b : cattttgtcccactgagaggattgccttttccaacccattgcccaagacattataaattt
CBLT1_0024_G03.b : acatttggtcccatgaaaaggatggcttttcaagccaatgcccaaaaattataaattttt
LVR01_0089_A01.b : attacatttttgtccacatggaaaaggattgccctttccaagcccaatggcccaaaacat
DCI01_0057_E12.b : CATTTTGTCCACATGAGAGGATTGCCTTTCCAAGCCAATGCCCAAGACATTATAAATTTT


20110601C-003643 : TTTGCTCCACTGAAGCCTGTTAGAATCACCATGGAATATAGCTCCAGTGGGAAGGCCACT
                   ---------+---------+---------+---------+---------+---------+ 1029
HTMT1_0097_G11.b : tttgcctccactgaaccctgttgaaatccccatggaaaaatacctccctgggaaaggccc
SKNB1_0095_A09.b : ttttgctccccggaacccctgtagaatccccctggaatatagctcccgtgcgaaagcccc
CBLT1_0024_G03.b : ttgctccccgggagccggtaaaaacccatgggaaattcctcccttggaagggcccgtgaa
LVR01_0089_A01.b : ttataaaattttttttgcctcccctgtgaaccctggttaaaaatcccccttgggaaaaat
DCI01_0057_E12.b : TTTGCTCCACTGAAGCCTGTTAGAATCACCATGGAATATAGCTCCAGTGGGAAGGCCACT


20110601C-003643 : GGAGAAGCTGATGTGCACTTCGAGACCCCATGAGATGCTGTGGCAGCTATGCTCAAGG..
                   ---------+---------+---------+---------+---------+---------+ 1087
HTMT1_0097_G11.b : cgggaaaaactgaagtgccccttcaaaaccccggaggaagtctggggccctttgtctaag
SKNB1_0095_A09.b : ctgaaaaaactgatgtcccctcccaaacccccgaggatgctggggccgctttgctcaggg
CBLT1_0024_G03.b : aacctaattgccctccagaccccgagggagcttgggcccttaccccagggatggccccgg
LVR01_0089_A01.b : aacctcccgggtggggaaagggcccctgggaaaaaaaccctaaattttggcaccttttcc
DCI01_0057_E12.b : GGAGAAGCTGATGTGCACTTCGAGACCCCATGAGATGCTGTGGCAGCTATGCTCAAGGga


20110601C-003643 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1087
HTMT1_0097_G11.b : ggaatggccccctgttccccaaaggaaaatgagatgtttcccgaaattgagcccaaaagg
SKNB1_0095_A09.b : atccgccccaggttccccataggtaaattgaattgttcccgaaatccgcccccagggaaa
CBLT1_0024_G03.b : ttcccaagggaattgaattttccgaattccgcccaaggagaaaaaacttcggggttccca
LVR01_0089_A01.b : aagaacccccatttgaaggggaatgccctggtgtgggggccaccctttaatttccccccc
DCI01_0057_E12.b : tcgtcccnatgtcaccatangtatattgaattngtccctgantcatgtccaaaaggaaat


20110601C-003643 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1087
HTMT1_0097_G11.b : aaataaaacttccggggggtccccataattagggaaaaaaaagaaatttttctttgtcca
SKNB1_0095_A09.b : atacacctcccgcgagcccccataaaagggatgaacccgaaacctttccttggcacccta
CBLT1_0024_G03.b : ataaaggggaaacaaagaatttttttccctttgtggaaggggaaaaataaatttcggttt
LVR01_0089_A01.b : caaaggggggaaatttcggcgggtgcccccccc                          
DCI01_0057_E12.b : aagacttaaggggatccangatataggatgaagccagagcatttctttgccatctatct


20110601C-003643 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1087
HTMT1_0097_G11.b : ctttttggggaagaggaataatataataatgtgtgttttctaccaccacctctgagaaac
SKNB1_0095_A09.b : tccggcacaggggaatatatta                                     
CBLT1_0024_G03.b : ttccacacgcgaaaaaaatttggggtttttttcctttaaaaatccgggggttttaaaaca
LVR01_0089_A01.b :                                                             
DCI01_0057_E12.b :                                                             


20110601C-003643 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1087
HTMT1_0097_G11.b : attt                                                       
SKNB1_0095_A09.b :                                                             
CBLT1_0024_G03.b : aaaaaacttggataaaacaaccatatttttgttaaccgccggattaaaaacttttttttt
LVR01_0089_A01.b :                                                             
DCI01_0057_E12.b :                                                             


20110601C-003643 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1087
HTMT1_0097_G11.b :                                                             
SKNB1_0095_A09.b :                                                             
CBLT1_0024_G03.b : taca                                                       
LVR01_0089_A01.b :                                                             
DCI01_0057_E12.b :