Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-003670

Sequence: [FASTA format sequence] AGCTCACTGC CCTGGAAACC ACCCCCAACC TCCACCCTCG GACACCATGG TCAGCTCGTG TTGTGGCTCC GTCTGCTCTG ACCAGGGCTG TGGCCAAGAC CTCTGCCAGG AGACCTGCTG CAGCCCCAGC TGCTGCCAGA CCACCTGCTG CAGGACCACC TGCTGCCGCC CCAGCTGCGG TGTGTCCACC TGCTGCCGCC CCAGATGCTG CATCTCCAGC GGCTGCAGGC CCCAATGCTG CCAGTCTGTG TGCTGCCAGC CCACCTGCTG CCGCCCCAGA TGCTGCATCT CTAGCTGCTG CAGGCCCCCG TGCTGCCAGT CCTCGTGCTG CCAGCCCTCC TGCTCTCAGC CCCGCTGCTG CATCTCTAGC TGCTGCAGGC CCCAGTGCTG CCAGCCCTCC TGCTGTGGCT CCAGCCCCTG TGGCTCCAGC TGCTGCCACC CCTGCTGCTG CCTGCGCCCC GTCTGTGGCC GGGTCTCCTG CCACACCACT TGCTATCGCC CCATCTGTGT CATCTCCACC TGCCCCCGCC CCACGTGCTG TGCCTCCTCC TGCTGCTGAA TCTCTCCTTT GGACACACTG CTTCCTCATC TCCTCCCTCC CCAAAGATGC TGATTCTCCT CTTTAAATGC GGCCTGCTCG CGAGAATTGA TCTCCTGGGT CTCCAGAGCA GACCCCAGCC CCACTGAGCA CACGTTCTTA CTTCCGTCCA AACTCCCTCC CTTCTCAGGG AACTCATTCA GAACCTCCTC GGAAATTAAA CTCCCCCCAC ACTCCTCCCC TTGTCTTCAG GAATCCATCC TTCCTGCTTC AGGAATCTGG CTCCATCACT GGTGGGGCCA CAGGTTTTCA CCCCCTGGCA CAGCAGCCCT CGAAGTCTTC CTGGGTATTA TCTGCACAAC TTTTGCTTAT GTATTGGTAT TTCCATGTAT GAAAATAAAC GTCTCTCCTA GCACTGAAAA GGGAAAAAAA AAAAAAAAA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
KRTAP4-8 keratin-associated protein 4-8 [Homo sapiens]. 83.2 3e-16 O

LOC100134267 PREDICTED: keratin-associated protein 4-8-like isoform 1 [Homo sapiens]. 83.2 3e-16

KRTAP4-12 keratin-associated protein 4-12 [Homo sapiens]. 82.8 4e-16

KRTAP4-6 keratin-associated protein 4-6 [Homo sapiens]. 82.8 4e-16

KRTAP4-7 putative keratin-associated protein 4-X [Homo sapiens]. 82.8 4e-16 O

KRTAP4-5 keratin-associated protein 4-5 [Homo sapiens]. 81.6 1e-15 O

KRTAP4-11 keratin-associated protein 4-11 [Homo sapiens]. 81.3 1e-15

KRTAP4-9 keratin-associated protein 4-9 [Homo sapiens]. 80.1 3e-15

KRTAP4-3 keratin-associated protein 4-3 [Homo sapiens]. 56.6 3e-08 O

KRTAP4-2 keratin-associated protein 4-2 [Homo sapiens]. 56.2 4e-08 O

Locus	Definition	Score	E value	FL
KRTAP4-8	keratin-associated protein 4-8 [Homo sapiens].	83.2	3e-16	O
LOC100134267	PREDICTED: keratin-associated protein 4-8-like isoform 1 [Homo sapiens].	83.2	3e-16
KRTAP4-12	keratin-associated protein 4-12 [Homo sapiens].	82.8	4e-16
KRTAP4-6	keratin-associated protein 4-6 [Homo sapiens].	82.8	4e-16
KRTAP4-7	putative keratin-associated protein 4-X [Homo sapiens].	82.8	4e-16	O
KRTAP4-5	keratin-associated protein 4-5 [Homo sapiens].	81.6	1e-15	O
KRTAP4-11	keratin-associated protein 4-11 [Homo sapiens].	81.3	1e-15
KRTAP4-9	keratin-associated protein 4-9 [Homo sapiens].	80.1	3e-15
KRTAP4-3	keratin-associated protein 4-3 [Homo sapiens].	56.6	3e-08	O
KRTAP4-2	keratin-associated protein 4-2 [Homo sapiens].	56.2	4e-08	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Krtap4-1 keratin associated protein 4-1 [Mus musculus]. 73.2 3e-13 O

Krtap4-7 keratin-associated protein 4-6 [Mus musculus]. 73.2 3e-13 O

Gm11563 keratin associated protein 4-like [Mus musculus]. 73.2 3e-13 O

Krtap4-2 keratin associated protein 4-2 [Mus musculus]. 72 7e-13 O

Gm11554 keratin associated protein 4 family member [Mus musculus]. 51.6 9e-07 O

Krtap4-9 keratin associated protein 4 family member [Mus musculus]. 50.8 2e-06 O

Gm11564 keratin associated protein 4-like [Mus musculus]. 50.4 2e-06 O

LOC100502865 PREDICTED: hypothetical protein LOC100502865 [Mus musculus]. 50.4 2e-06 O

LOC100502865 PREDICTED: hypothetical protein LOC100502865 [Mus musculus]. 50.4 2e-06 O

2300003K06Rik hypothetical protein LOC666021 [Mus musculus]. 50.4 2e-06 O

Locus	Definition	Score	E value	FL
Krtap4-1	keratin associated protein 4-1 [Mus musculus].	73.2	3e-13	O
Krtap4-7	keratin-associated protein 4-6 [Mus musculus].	73.2	3e-13	O
Gm11563	keratin associated protein 4-like [Mus musculus].	73.2	3e-13	O
Krtap4-2	keratin associated protein 4-2 [Mus musculus].	72	7e-13	O
Gm11554	keratin associated protein 4 family member [Mus musculus].	51.6	9e-07	O
Krtap4-9	keratin associated protein 4 family member [Mus musculus].	50.8	2e-06	O
Gm11564	keratin associated protein 4-like [Mus musculus].	50.4	2e-06	O
LOC100502865	PREDICTED: hypothetical protein LOC100502865 [Mus musculus].	50.4	2e-06	O
LOC100502865	PREDICTED: hypothetical protein LOC100502865 [Mus musculus].	50.4	2e-06	O
2300003K06Rik	hypothetical protein LOC666021 [Mus musculus].	50.4	2e-06	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC490996 PREDICTED: similar to keratin associated protein 4-12 isoform 1 [Canis familiaris]. 82.8 5e-16

LOC490996 PREDICTED: similar to keratin associated protein 4-12 isoform 3 [Canis familiaris]. 82.8 5e-16

LOC490996 PREDICTED: similar to keratin associated protein 4-12 isoform 2 [Canis familiaris]. 82.8 5e-16

LOC490994 PREDICTED: similar to keratin associated protein 4-12 isoform 1 [Canis familiaris]. 82.8 5e-16

LOC490994 PREDICTED: similar to keratin associated protein 4-12 isoform 2 [Canis familiaris]. 82.8 5e-16

Locus	Definition	Score	E value
LOC490996	PREDICTED: similar to keratin associated protein 4-12 isoform 1 [Canis familiaris].	82.8	5e-16
LOC490996	PREDICTED: similar to keratin associated protein 4-12 isoform 3 [Canis familiaris].	82.8	5e-16
LOC490996	PREDICTED: similar to keratin associated protein 4-12 isoform 2 [Canis familiaris].	82.8	5e-16
LOC490994	PREDICTED: similar to keratin associated protein 4-12 isoform 1 [Canis familiaris].	82.8	5e-16
LOC490994	PREDICTED: similar to keratin associated protein 4-12 isoform 2 [Canis familiaris].	82.8	5e-16

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
LOC510062 PREDICTED: hypothetical protein [Bos taurus]. 84.7 1e-16 O

LOC510062 PREDICTED: hypothetical protein [Bos taurus]. 84.7 1e-16 O

LOC788228 PREDICTED: hypothetical protein [Bos taurus]. 81.3 1e-15 O

LOC618491 PREDICTED: hypothetical protein [Bos taurus]. 81.3 1e-15

LOC100141108 PREDICTED: hypothetical protein isoform 2 [Bos taurus]. 81.3 1e-15

LOC100141108 PREDICTED: hypothetical protein isoform 1 [Bos taurus]. 81.3 1e-15

LOC787132 PREDICTED: keratin associated protein 4-7-like [Bos taurus]. 81.3 1e-15

LOC788228 PREDICTED: hypothetical protein isoform 1 [Bos taurus]. 81.3 1e-15

KRTAP4-7 keratin associated protein 4-7 [Bos taurus]. 81.3 1e-15

LOC787132 PREDICTED: keratin associated protein 4-7-like [Bos taurus]. 81.3 1e-15

Locus	Definition	Score	E value	FL
LOC510062	PREDICTED: hypothetical protein [Bos taurus].	84.7	1e-16	O
LOC510062	PREDICTED: hypothetical protein [Bos taurus].	84.7	1e-16	O
LOC788228	PREDICTED: hypothetical protein [Bos taurus].	81.3	1e-15	O
LOC618491	PREDICTED: hypothetical protein [Bos taurus].	81.3	1e-15
LOC100141108	PREDICTED: hypothetical protein isoform 2 [Bos taurus].	81.3	1e-15
LOC100141108	PREDICTED: hypothetical protein isoform 1 [Bos taurus].	81.3	1e-15
LOC787132	PREDICTED: keratin associated protein 4-7-like [Bos taurus].	81.3	1e-15
LOC788228	PREDICTED: hypothetical protein isoform 1 [Bos taurus].	81.3	1e-15
KRTAP4-7	keratin associated protein 4-7 [Bos taurus].	81.3	1e-15
LOC787132	PREDICTED: keratin associated protein 4-7-like [Bos taurus].	81.3	1e-15

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100517852 PREDICTED: keratin-associated protein 4-7-like [Sus scrofa]. 87 1e-17 O

LOC100523463 PREDICTED: keratin-associated protein 4-8-like [Sus scrofa]. 87 1e-17 O

LOC100517304 PREDICTED: keratin-associated protein 4-11-like [Sus scrofa]. 87 1e-17 O

LOC100517119 PREDICTED: keratin-associated protein 4-11-like isoform 1 [Sus scrofa]. 85.1 5e-17 O

LOC100516932 PREDICTED: keratin-associated protein 4-11-like [Sus scrofa]. 85.1 5e-17

LOC100522699 PREDICTED: keratin-associated protein 4-11-like [Sus scrofa]. 80.9 1e-15 O

LOC100517119 PREDICTED: keratin-associated protein 4-11-like isoform 2 [Sus scrofa]. 72.8 3e-13 O

Locus	Definition	Score	E value	FL
LOC100517852	PREDICTED: keratin-associated protein 4-7-like [Sus scrofa].	87	1e-17	O
LOC100523463	PREDICTED: keratin-associated protein 4-8-like [Sus scrofa].	87	1e-17	O
LOC100517304	PREDICTED: keratin-associated protein 4-11-like [Sus scrofa].	87	1e-17	O
LOC100517119	PREDICTED: keratin-associated protein 4-11-like isoform 1 [Sus scrofa].	85.1	5e-17	O
LOC100516932	PREDICTED: keratin-associated protein 4-11-like [Sus scrofa].	85.1	5e-17
LOC100522699	PREDICTED: keratin-associated protein 4-11-like [Sus scrofa].	80.9	1e-15	O
LOC100517119	PREDICTED: keratin-associated protein 4-11-like isoform 2 [Sus scrofa].	72.8	3e-13	O

Assembly Members: 6 TOP

Library Plate Loc. Read Name Accession Full Seq.

SKNB1 0020 C11 SKNB1_0020_C11.b
SKNB1 0043 A07 SKNB1_0043_A07.b DB802383 AK349757
SKNB1 0046 D10 SKNB1_0046_D10.b DB802620 AK400918
SKNB1 0055 G06 SKNB1_0055_G06.b DB803301
SKNB1 0077 B09 SKNB1_0077_B09.b DB804678
SKNB1 0082 G12 SKNB1_0082_G12.b

SNPs: 2 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
384 A 3 0 0.500 W -
C 3 0 0.500
496 C 3 0 0.500 W S TAC/Y
T 3 0 0.500 TAT/Y

Alignment: TOP

20110601C-003670 : .........................................AGCTCACTGCCCTGGAAAC
                   ---------+---------+---------+---------+---------+---------+ 19
SKNB1_0046_D10.b :                      nnttaacgtggctaactgagAGCTCACTGCCCTGGAACC
SKNB1_0082_G12.b :     nnnnccctattctnnncccacgttgtgcaggaactgagaactcCTGCCCTGGAAAC
SKNB1_0020_C11.b :      nnnggttttnnattcctacgtcggctaggaactccagaactcCTGCCCTGGAAAC
SKNB1_0077_B09.b :                nnnnnttcgcgtggctctggaactgagaactcCTGCCCTGGAAAC
SKNB1_0055_G06.b :                nnnnntcagctgttggctacgaatcgagaactcctgccctggaaa
SKNB1_0043_A07.b : nnnggcttnttcnnnccagcgtggctatggggaactgagaagctcactgccctggaaacc


20110601C-003670 : CACCCCCAACCTCCACCCTCGGACACCATGGTCAGCTCGTGTTGTGGCTCCGTCTGCTCT
                   ---------+---------+---------+---------+---------+---------+ 79
SKNB1_0046_D10.b : CACCCCCAACCTCCCCCTC**GGAACCATGGTCAGCTCGTGTTGTGGCTCCGTCTGCTCT
SKNB1_0082_G12.b : CACCCCCAACCTCCACCCTCGGACACCATGGTCAGCTCGTGTTGTGGCTCCGTCTGCTCT
SKNB1_0020_C11.b : CACCCCCAACCTCCACCCTCTTGAACCATGGTCAGCTCGTGTTGTGGCTCCGTCTGCTCT
SKNB1_0077_B09.b : CACCCCCAACCTCCACCCTCGGACACCATGGTCAGCTCGTGTTGTGGCTCCGTCTGCTCT
SKNB1_0055_G06.b : ccaCCCCAACCTCCACCCTCGGACACCATGGTCAGCTCGTGTTGTGGCTCCGTCTGCTCT
SKNB1_0043_A07.b : cacCCCCAACCTCCACCCTCTGACACCATGGTCAGCTCGTGTTGTGGCTCCGTCTGCTCT


20110601C-003670 : GACCAGGGCTGTGGCCAAGACCTCTGCCAGGAGACCTGCTGCAGCCCCAGCTGCTGCCAG
                   ---------+---------+---------+---------+---------+---------+ 139
SKNB1_0046_D10.b : GACCAGGGCTGTGGCCAAGACCTCTGCCAGGAGACCTGCTGCAGCCCCAGCTGCTGCCAG
SKNB1_0082_G12.b : GACCAGGGCTGTGGCCAAGACCTCTGCCAGGAGACCTGCTGCAGCCCCAGCTGCTGCCAG
SKNB1_0020_C11.b : GACCAGGGCTGTGGCCAAGACCTCTGCCAGGAGACCTGCTGCAGCCCCAGCTGCTGCCAG
SKNB1_0077_B09.b : GACCAGGGCTGTGGCCAAGACCTCTGCCAGGAGACCTGCTGCAGCCCCAGCTGCTGCCAG
SKNB1_0055_G06.b : GACCAGGGCTGTGGCCAAGACCTCTGCCAGGAGACCTGCTGCAGCCCCAGCTGCTGCCAG
SKNB1_0043_A07.b : GACCAGGGCTGTGGCCAAGACCTCTGCCAGGAGACCTGCTGCAGCCCCAGCTGCTGCCAG


20110601C-003670 : ACCACCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGCGGTGTGTCCACCTGCTGCCGC
                   ---------+---------+---------+---------+---------+---------+ 199
SKNB1_0046_D10.b : ACCACCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGCGGTGTGTCCACCTGCTGCCGC
SKNB1_0082_G12.b : ACCACCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGCGGTGTGTCCACCTGCTGCCGC
SKNB1_0020_C11.b : ACCACCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGCGGTGTGTCCACCTGCTGCCGC
SKNB1_0077_B09.b : ACCACCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGCGGTGTGTCCACCTGCTGCCGC
SKNB1_0055_G06.b : ACCACCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGCGGTGTGTCCACCCGCTGCCGC
SKNB1_0043_A07.b : ACCACCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGCGGTGTGTCCACCTGCTGCCGC


20110601C-003670 : CCCAGATGCTGCATCTCCAGCGGCTGCAGGCCCCAATGCTGCCAGTCTGTGTGCTGCCAG
                   ---------+---------+---------+---------+---------+---------+ 259
SKNB1_0046_D10.b : CCCAGATGCTGCATCTCCAGCGGCTGCAGGCCCCAATGCTGCCAGTCTGTGTGCTGCCAG
SKNB1_0082_G12.b : CCCAGATGCTGCATCTCCAGCGGCTGCAGGCCCCAATGCTGCCAGTCTGTGTGCTGCCAG
SKNB1_0020_C11.b : CCCAGATGCTGCATCTCCAGCGGCTGCAGGCCCCAATGCTGCCAGTCTGTGTGCTGCCAG
SKNB1_0077_B09.b : CCCAGATGCTGCATCTCCAGCGGCTGCAGGCCCCAATGCTGCCAGTCTGTGTGCTGCCAG
SKNB1_0055_G06.b : CCCAGATGCTGCATCTCCAGCGGCTGCAGGCCCCAATGCTGCCAGTCTGTGTGCTGCCAG
SKNB1_0043_A07.b : CCCAGATGCTGCATCTCCAGCGGCTGCAGGCCCCAATGCTGCCAGTCTGTGTGCTGCCAG


20110601C-003670 : CCCACCTGCTGCCGCCCCAGATGCTGCATCTCTAGCTGCTGCAGGCCCCCGTGCTGCCAG
                   ---------+---------+---------+---------+---------+---------+ 319
SKNB1_0046_D10.b : CCCACCTGCTGCCGCCCCAGATGCTGCATCTCTAGCTGCTGCAGGCCCCCGTGCTGCCAG
SKNB1_0082_G12.b : CCCACCTGCTGCCGCCCCAGATGCTGCATCTCTAGCTGCTGCAGGCCCCCGTGCTGCCAG
SKNB1_0020_C11.b : CCCACCTGCTGCCGCCCCAGATGCTGCATCTCTAGCTGCTGCAGGCCCCCGTGCTGCCAG
SKNB1_0077_B09.b : CCCACCTGCTGCCGCCCCAGATGCTGCATCTCTAGCTGCTGCAGGCCCCCGTGCTGCCAG
SKNB1_0055_G06.b : CCCACCTGCTGCCGCCCCAGATGCTGCATCTCTAGCTGCTGCAGGCCCCCGTGCTGCCAG
SKNB1_0043_A07.b : CCCACCTGCTGCCGCCCCAGATGCTGCATCTCTAGCTGCTGCAGGCCCCCGTGCTGCCAG


20110601C-003670 : TCCTCGTGCTGCCAGCCCTCCTGCTCTCAGCCCCGCTGCTGCATCTCTAGCTGCTGCAGG
                   ---------+---------+---------+---------+---------+---------+ 379
SKNB1_0046_D10.b : TCCTCGTGCTGCCAGCCCTCCTGCTCTCAGCCCCGCTGCTGCATCTCTAGCTGCTGCAGG
SKNB1_0082_G12.b : TCCTCGTGCTGCCAGCCCTCCTGCTCTCAGCCccgctgctgcatctctagctgctgcagg
SKNB1_0020_C11.b : TCCTCGTGCTGCCAGCCCTCCTGCTCTCAGCCccgctgctgcatctctagctgctgcagg
SKNB1_0077_B09.b : TCCTCGTGCTGCCAGCCCTCCTGCTCTCAGCCccgctgctgcatctctagctgctgcagg
SKNB1_0055_G06.b : TCCTCGTGCTGCCAGCCCTCCTGCTCTCAGCCccgctgctgcatctctagctgctgcagg
SKNB1_0043_A07.b : TCCTCGTGCTGCCAGCCCTCCTGCTCTCAGCCccgctgctgcatctctagctgctgcagg


20110601C-003670 : CCCCAGTGCTGCCAGCCCTCCTGCTGTGGCTCCAGCCCCTGTGGCTCCAGCTGCTGCCAC
                   ---------+---------+---------+---------+---------+---------+ 439
SKNB1_0046_D10.b : CCCCAGTGCTGCCAGCCCTCCTGTTGTGGCTCCAGCCCCTGTGGCTCCAGCTGCTGCCAC
SKNB1_0082_G12.b : cccccgtgctgccagccctcctgctgtggctccagcccctgtggctccagctgctgccac
SKNB1_0020_C11.b : cccccgtgctgccagccctcctgctgtggctccagcccctgtggctccagctgctgccac
SKNB1_0077_B09.b : ccccagtgctgccagccctcctgctgtggctccagcccctgtggctccagctgctgccac
SKNB1_0055_G06.b : ccccagtgctgccagccctcctgctgtggctccagcccctgtggctccagctgctgccac
SKNB1_0043_A07.b : cccccgtgctgccagccctcctgctgtggctccagcccctgtggctccagctgctgccac


20110601C-003670 : CCCTGCTGCTGCCTGCGCCCCGTCTGTGGCCGGGTCTCCTGCCACACCACTTGCTATCGC
                   ---------+---------+---------+---------+---------+---------+ 499
SKNB1_0046_D10.b : CCCTGCTGCTGCCTGCGCCCCGTCTGTGGCCGGGTCTCCTGCCACACCACTTGCTATCGC
SKNB1_0082_G12.b : ccctgctgctgcCTGCGCCCCGTCTGTGGCCGGGTCTCCTGCCACACCACTTGCTACCGC
SKNB1_0020_C11.b : ccctgctgctgcCTGCGCCCCGTCTGTGGCCGGGTCTCCTGCCACACCACTTGCTACCGC
SKNB1_0077_B09.b : ccctgctgctgcCTGCGCCCCGTCTGTGGCCGGGTCTCCTGCCACACCACTTGCTATCGC
SKNB1_0055_G06.b : ccctgctgctgcCTGCGCCCCGTCTGTGGCCGGGTCTCCTGCCACACCACTTGCTATCGC
SKNB1_0043_A07.b : ccctgctgctgcCTGCGCCCCGTCTGTGGCCGGGTCTCCTGCCACACCACTTGCTACCGC


20110601C-003670 : CCCATCTGTGTCATCTCCACCTGCCCCCGCCCCACGTGCTGTGCCTCCTCCTGCTGCTGA
                   ---------+---------+---------+---------+---------+---------+ 559
SKNB1_0046_D10.b : CCCATCTGTGTCATCTCCACCTGCCCCCGCCCCACGTGCTGTGCCTCCTCCTGCTGCTGA
SKNB1_0082_G12.b : CCCATCTGTGTCATCTCCACCTGCCCCCGCCCCACGTGCTGTGCCTCCTCCTGCTGCTGA
SKNB1_0020_C11.b : CCCATCTGTGTCATCTCCACCTGCCCCCGCCCCACGTGCTGTGCCTCCTCCTGCTGCTGA
SKNB1_0077_B09.b : CCCATCTGTGTCATCTCCACCTGCCCCCGCCCCACGTGCTGTGCCTCCTCCTGCTGCTGA
SKNB1_0055_G06.b : CCCATCTGTGTCATCTCCACCTGCCCCCGCCCCACGTGCTGTGCCTCCTCCTGCTGCTGA
SKNB1_0043_A07.b : CCCATCTGTGTCATCTCCACCTGCCCCCGCCCCACGTGCTGTGCCTCCTCCTGCTGCTGA


20110601C-003670 : ATCTCTCCTTTGGACACACTGCTTCCTCATCTCCTCCCTCCCCAAAGATGCTGATTCTCC
                   ---------+---------+---------+---------+---------+---------+ 619
SKNB1_0046_D10.b : ATCTCTCCTTTGGACACACTGCTTCCTCATCTCCTCCCTCCCCAAAGATGCTGATTCTCC
SKNB1_0082_G12.b : ATCTCTCCTTTGGACACACTGCTTCCTCATCTCCTCCCTCCCCAAAGATGCTGATTCTCC
SKNB1_0020_C11.b : ATCTCTCCTTTGGACACACTGCTTCCTCATCTCCTCCCTCCCCAAAGATGCTGATTCTCC
SKNB1_0077_B09.b : ATCTCTCCTTTGGACACACTGCTTCCTCATCTCCTCCCTCCCCAAA*ATGCTGATTCTCC
SKNB1_0055_G06.b : ATCTCTCCTTTGGACACACTGCTTCCTCATCTCCTCCCTCCCCAAAGATGCTGATTCTCC
SKNB1_0043_A07.b : ATCTCTCCTTTGGACACACTGCTTCCTCATCTCCTCCCTCCCCAAAGATGCTGATTCTCC


20110601C-003670 : TCTTTAAATGCGGCCTGCTCGCGAGAATTGATCTCCTGGGTCTCCAGAGCAGACCCCAGC
                   ---------+---------+---------+---------+---------+---------+ 679
SKNB1_0046_D10.b : TCTTTAAATGCGGCCTGCTCGCGAGAATTGATCTCCTGGGTCTCCAGAGCAGACCCCAGC
SKNB1_0082_G12.b : TCTTTAAATGCGGCCTGCTCGCGAGAATTGATCTCCTGGGTCTCCAGAGCAGACCCCAGC
SKNB1_0020_C11.b : TCTTTAAATGCGGCCTGCTCGCGAGAATTGATCTCCTGGGTCTCCAGAGCAGACCCCAGC
SKNB1_0077_B09.b : TCTTTAAATGCGGCCCGCTCGCGAGAATTGATCTCCTGGGTCTCCAGAGCAGACCCCAGC
SKNB1_0055_G06.b : TCTTTAAATGCGGCCTGCTCGCGAGAATTGATCTCCTGGGTCTCCAGAGCAGACCCCAGC
SKNB1_0043_A07.b : TCTTTAAATGCGGCCTGCTCGCGAGAATTGATCTCCTGGGTCTCCAGAGCAGACCCCAGC


20110601C-003670 : CCCACTGAGCACACGTTCTTACTTCCGTCCAAACTCCCTCCCTTCTCAGGGAACTCATTC
                   ---------+---------+---------+---------+---------+---------+ 739
SKNB1_0046_D10.b : CCCACTGAGCACACGTTCTTACTTCCGTCCAAACTCCCTCCCTTCTCAGGGAACTCATTC
SKNB1_0082_G12.b : CCCACTGAGCACACGTTCTTACTTCCGTCCAAACTCCCTCCCTTCTCAGGGAACTCATTC
SKNB1_0020_C11.b : CCCACTGAGCACACGTTCTTACTTCCGNTCAAACTCCCTCCCTTCTCANGGAACTCATTC
SKNB1_0077_B09.b : CCCACTGAGCACACGTTCTTACTTCCGTCCAAACTCCCTCCCTTCTCAGGGAACTCATTC
SKNB1_0055_G06.b : CCCACTGAGCACACGTTCTTACTTCCGTCCAAACTCCCTCCCTTCTCAGGGAACTCATTC
SKNB1_0043_A07.b : CCCACTGAGCACACGTTCTTACTTCCGTCCAAACTCCCTCCCTTCTCAGGGAACTCATTC


20110601C-003670 : AGAACCTCCTCGGAAATTAAACTCCCCCCACACTCCTCCCCTTGTCTTCAGGAATCCATC
                   ---------+---------+---------+---------+---------+---------+ 799
SKNB1_0046_D10.b : AGAACCTCCTCGGAAATTAAACTCCCCCCACACTCCTCCCCTTGTCTTCAGGAATCCATC
SKNB1_0082_G12.b : AGAACCTCCTCGGAAATTAAACTCCCCCCACACTCCTCCCCTTGTCTTCAGGAATCCATC
SKNB1_0020_C11.b : AGAACCTCCTCGGAAATTAAACTCCCCCCACACTCCCTCCCTTGTCTTCAGGAATCCATC
SKNB1_0077_B09.b : AGAACCTCCTCGGAAATTAAACTCCCCCCACACTCCTCCCCTTGTCTTCAGGAATCCATC
SKNB1_0055_G06.b : AGAACCTCCCCGGAAATTAAACTCCCCCCACACTCCTCCCCTTGTCTTCAGGAATCCATC
SKNB1_0043_A07.b : AGAACCTCCTCGGAAATTAAACTCCCCCCACACTCCTCCCCTTGTCTTCAGGAATCCATC


20110601C-003670 : CTTCCTGCTTCAGGAATCTGGCTCCATCACTGGTGGGGCCACAGGTTTTCACCCCCTGGC
                   ---------+---------+---------+---------+---------+---------+ 859
SKNB1_0046_D10.b : CTTCCTGCTTCANGAATCTGGCTCCATCACTGGTGGGGCCACAGGTTTTCACCCCCTGGC
SKNB1_0082_G12.b : CTTCCTGCTTCANGAATCTGGCTCCATCACTGGTGGGGCCACAGGTTTTCACCCCCTGGC
SKNB1_0020_C11.b : CTTCCTGCTTCANGAATCTGGCTCCATCACTGGTGGGGCCACAGGTTTTCACCCCCTGGC
SKNB1_0077_B09.b : CTTCCTGCTTCAGGAATCTGGCTCCATCACTGGTGGGGCCACAGGTTTTCACCCCCTGNC
SKNB1_0055_G06.b : CTTCCTGCTTCANGAATCTGGCTCCATCACTGGTGGGGCCACAGGTTTTCACCCCCTGGC
SKNB1_0043_A07.b : CTTCCTGCTTCAGGAATCTGGCTCCATCACTGGTGGGGCCACAGGTTTTCACCCCCTGGC


20110601C-003670 : ACAGCAGCCCTCGAAGTC*TTCCTGGGTATTATCTGCACAACTT*TTGCTTATGTATTGG
                   ---------+---------+---------+---------+---------+---------+ 917
SKNB1_0046_D10.b : ACAGCAGCCCTCGAAGTC*TTCCTGGGTAT*ATCTGCACAACTT*Ttgcttatgtatggg
SKNB1_0082_G12.b : ACAGCANCCCCTCGAAGTCTTCCTGGGTATTATCTNGCACACTTTTTGCTNATGTATTGG
SKNB1_0020_C11.b : ACAGCAGCCCTCGAAGTCCTTCCTGGGTATTATCTGCCACACTT*TTGCTTATGTATTGG
SKNB1_0077_B09.b : ACAGCAGCCCTCGAAGTC*TTCCTGGGTATTATCTGCANCACTT*TTGCTTATGTNATGG
SKNB1_0055_G06.b : ACACAGCCCCTCGAAGTC*TTCCTGGGTA*TATCTGCACAACT**TTGCTTATGTNATGG
SKNB1_0043_A07.b : ACAGCANCCCTCGAAGTC*TTCCTGGGTATTATCTGCACAACTT*TTGCTTATGTATTGG


20110601C-003670 : TATTTCCATGTATGAAAATAAACGTCTCTCCTAGCACTGAAAAGGGAAAAAAAAAAAAAA
                   ---------+---------+---------+---------+---------+---------+ 977
SKNB1_0046_D10.b : gatttcatgtatgaaataaacgtctctcctacactgnnnnnnnnnnnnnnnnnnnnnnnn
SKNB1_0082_G12.b : TATTTCCATGTATGAAAATAAACGTCTCctcctagccctgaannnnnnnnnnnnnnnnnn
SKNB1_0020_C11.b : TATTTCCATGTATGAAAATAAACGTCTCTCCTAagcacctgnnnnnnnnnnnnnnnnnnn
SKNB1_0077_B09.b : TATTTCCATGTATGAAAATAAACGTCTCTCCTAGCACTGAAAAGGGaaaaaaaaaaaaaa
SKNB1_0055_G06.b : TATTTCCATGTATGAAAATAAACGTCTCTCCTANCACTngaaaaaaaaaaaaaaaaaggx
SKNB1_0043_A07.b : TATTTCCATGTATGAAAATAAACGTCTCTCCTAGCACTaaaaaaaaaaaaaaaaaaaaaa


20110601C-003670 : AA..........................................................
                   ---------+---------+---------+---------+---------+---------+ 979
SKNB1_0046_D10.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SKNB1_0082_G12.b : nnnnnnnnnnnnnnnaaaaggccccttgttccccacctgcagttcccgccccctaaaaca
SKNB1_0020_C11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn  
SKNB1_0077_B09.b : aaaaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SKNB1_0055_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SKNB1_0043_A07.b : aaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn


20110601C-003670 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 979
SKNB1_0046_D10.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SKNB1_0082_G12.b : attcaaagaaaaacctcccccaactccccccgacccgaaaataaaaggatggccattgtg
SKNB1_0020_C11.b :                                                             
SKNB1_0077_B09.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SKNB1_0055_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgcccc
SKNB1_0043_A07.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn


20110601C-003670 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 979
SKNB1_0046_D10.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SKNB1_0082_G12.b : ttttttactttttaatgcccctctaaaaggttacaaaaaaccaaa              
SKNB1_0020_C11.b :                                                             
SKNB1_0077_B09.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SKNB1_0055_G06.b : ttaaaggggtccaaaaaacaaaagccccccaatttccaaaaaagaattttttctgcttcc
SKNB1_0043_A07.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn


20110601C-003670 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 979
SKNB1_0046_D10.b : n                                                          
SKNB1_0082_G12.b :                                                             
SKNB1_0020_C11.b :                                                             
SKNB1_0077_B09.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn                    
SKNB1_0055_G06.b : cccctggggtgggccaacccccaggatttaaatgattgggccccgggccgcggcccgaaa
SKNB1_0043_A07.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn                      


20110601C-003670 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 979
SKNB1_0046_D10.b :                                                             
SKNB1_0082_G12.b :                                                             
SKNB1_0020_C11.b :                                                             
SKNB1_0077_B09.b :                                                             
SKNB1_0055_G06.b : ttctttccccttcccccc                                         
SKNB1_0043_A07.b :