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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-003918

Length: 964

Sequence [FASTA format sequence]
CGTGTCAAGT TGATTGAAAG CGAATGGCGC CGTAGCAATG GCGGCGCTCA GAAGTGCGAC
TGGTGGTGGC AATTGGTTTT CGGCTTTGGC GCTCGGGGTG ACACTGCTCA AGTGCCTTCT
CATCCCCACC TATCATTCCA CAGATTTTGA AGTACACCGA AACTGGCTTG CTATCACCCA
CAGTTTGCCG ATATCACAGT GGTATTATGA GGCAACCTCA GAGTGGACCT TGGACTACCC
TCCCTTTTTC GCGTGGTTTG AGTTCGCCCT GTCACATGTT GCCAAGTATT TTGATCAAGA
GATGCTGAAT GTCCGTAATC TGAATTACTC CAGCTCAAGG ACCGTGCTCT TCCAGAGGTT
TTCTGTCATC TTCACAGACG TGCTCTTCGT GTATGCTGTC CATGAGTGCT GTAAGTGCAT
TGATGGGAAA AAAGCAGGCA AAGAACTTAC AGAGAAGCCA AAGTTTATTC TATCAGTATT
ACTGCTGTGG AACTTCGGGT TGTTAATTGT AGACCATATT CACTTCCAGT ACAATGGATT
TTTATTTGGA TTAATGCTAC TCTCCATTGC ACGATTATTT CAGAAAAGGC ATATGGAAGG
AGCATTCCTC TTTGCTGTTC TCCTACATTT CAAGCACATC TACCTCTATG TAGCACCAGC
TTACGGTATA TATCTGCTAC GATCTTACTG TTTCACTGCA AATAAACCAG ATGGGTCCAT
CCGATGGAAC AGCTTCAGCT TTGTTCGTCT TATTTCACTG GGACTGATTG TTTTCCTAGT
TTCTGCTCTT TCATTGGGTC CTTTTCTAGC CTTGAACCAA CTGCCTCCAG TCTTTTCCCG
ACTCTTCCCT TTCAGAGGGG CCTCTGCCAT GCATACTGGG CTCCAAACTC TGGGCTTGTA
CACGCTTTGG ACAAGTGCTG TCTGTCACCG TTTAGCATTG AACTGCTTGA CCCAGCAGAT
TCCC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinALG8probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform b [Homo sapiens]. 533e-152O
Contig/Assembly ProteinALG8probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform a [Homo sapiens]. 533e-152O
Contig/Assembly ProteinALG6dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Homo sapiens]. 1056e-23O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAlg8probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase [Mus musculus]. 513e-146O
Contig/Assembly ProteinAlg6dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Mus musculus]. 97.12e-20O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC476793PREDICTED: similar to alpha-1,3-glucosyltransferase ALG8 isoform a isoform 1 [Canis familiaris]. 534e-152O
Contig/Assembly ProteinLOC476793PREDICTED: similar to Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase) (HUSSY-02) isoform 2 [Canis familiaris]. 534e-152O
Contig/Assembly ProteinLOC476793PREDICTED: similar to alpha-1,3-glucosyltransferase ALG8 isoform a isoform 4 [Canis familiaris]. 500e-142O
Contig/Assembly ProteinLOC476793PREDICTED: similar to alpha-1,3-glucosyltransferase ALG8 isoform a isoform 6 [Canis familiaris]. 426e-119O
Contig/Assembly ProteinLOC476793PREDICTED: similar to Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase) (HUSSY-02) isoform 7 [Canis familiaris]. 361e-100O
Contig/Assembly ProteinLOC476793PREDICTED: similar to alpha-1,3-glucosyltransferase ALG8 isoform c isoform 5 [Canis familiaris]. 3018e-82O
Contig/Assembly ProteinLOC609974PREDICTED: similar to Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase) [Canis familiaris]. 97.12e-20O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinALG8probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase [Bos taurus]. 536e-152O
Contig/Assembly ProteinALG6dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Bos taurus]. 1063e-23O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinALG8PREDICTED: probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase [Sus scrofa]. 558e-159O
Contig/Assembly ProteinLOC100513219PREDICTED: probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase-like [Sus scrofa]. 382e-106O
Contig/Assembly ProteinALG6PREDICTED: dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Sus scrofa]. 1031e-22O


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010074D04AMP01_0074_D04.bBW960313 AK389791
AMP010082G06AMP01_0082_G06.bBW960954 
DCI010098D04DCI01_0098_D04.bDB798257 
DCI010099A02DCI01_0099_A02.bDB798315 
LVRM10111A05LVRM1_0111_A05.bBP448410 
OVRT10088E03OVRT1_0088_E03.bFS693580 AK400640
OVRT10100E03OVRT1_0100_E03.bFS694576 
THY010112A01THY01_0112_A01.bBP159445 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
315A110.250WNCAT/H
G600.750CGT/R
364C110.250WSTCC/S
T600.750TCT/S


Alignment:      TOP

20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0082_G06.b : nnaaaggtatttaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0100_E03.b :
OVRT1_0088_E03.b :
AMP01_0074_D04.b : nnggagaaaannnttagcacatcttgggctgctcccgcaccgxxxxxxxxxxxxxxxxx
THY01_0112_A01.b :
DCI01_0099_A02.b : nnnaaacgatactaagggctxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0098_D04.b : nnnttcgatactatagggctxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0111_A05.b :
20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0082_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0100_E03.b : nnnnnccgtcagcgnacgxxxxxxxxxx
OVRT1_0088_E03.b : nnncctccccnnnnnnnnccgttagcgnacgxxxx
AMP01_0074_D04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0112_A01.b :
DCI01_0099_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0098_D04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0111_A05.b : aaattgac
20110601C-003918 : ......................................CGTGTCAAGTTGATTGAAAGCG
---------+---------+---------+---------+---------+---------+ 22
AMP01_0082_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGTGTCAAGTTGATTGAAAGCG
OVRT1_0100_E03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtaagttgaTTGAAAGCG
OVRT1_0088_E03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTGAAAGCG
AMP01_0074_D04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaTTGAAAGCG
THY01_0112_A01.b : gttgcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgctatgGAAAGCG
DCI01_0099_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAAGCG
DCI01_0098_D04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAAGCG
LVRM1_0111_A05.b : nxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCG
20110601C-003918 : AATGGCGCCGTAGCAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
---------+---------+---------+---------+---------+---------+ 82
AMP01_0082_G06.b : AATGGCGCCGTAGCAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
OVRT1_0100_E03.b : AATGGCGCCGTAGCAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
OVRT1_0088_E03.b : AATGGCGCCGTAGCAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
AMP01_0074_D04.b : AATGGCGCCGTAGCAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
THY01_0112_A01.b : AATGGCGCCGTA*CAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
DCI01_0099_A02.b : AATGGCGCCGTAGCAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
DCI01_0098_D04.b : AATGGCGCCGTAGCAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
LVRM1_0111_A05.b : AATGGCGCCGTAGCAATGGCGGCGCTCAGAAGTGCGACTGGTGGTGGCAATTGGTTTTCG
20110601C-003918 : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
---------+---------+---------+---------+---------+---------+ 142
AMP01_0082_G06.b : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
OVRT1_0100_E03.b : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
OVRT1_0088_E03.b : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
AMP01_0074_D04.b : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
THY01_0112_A01.b : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
DCI01_0099_A02.b : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
DCI01_0098_D04.b : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
LVRM1_0111_A05.b : GCTTTGGCGCTCGGGGTGACACTGCTCAAGTGCCTTCTCATCCCCACCTATCATTCCACA
20110601C-003918 : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCACAGTTTGCCGATATCACAGTGG
---------+---------+---------+---------+---------+---------+ 202
AMP01_0082_G06.b : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCACAGTTTGCCGATATCACAGTGG
OVRT1_0100_E03.b : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCACAGTTTGCCGATATCACAGTGG
OVRT1_0088_E03.b : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCACAGTTTGCCGATATCACAGTGG
AMP01_0074_D04.b : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCACAGTTTGCCGATATCACAGTGG
THY01_0112_A01.b : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCACAGTTTGCCGATATCACAGTGG
DCI01_0099_A02.b : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCACAGTTTGCCGATATCACAGTGG
DCI01_0098_D04.b : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCACAGTTTGCCGATATCACAGTGG
LVRM1_0111_A05.b : GATTTTGAAGTACACCGAAACTGGCTTGCTATCACCCATAGTTTGCCGATATCACAGTGG
20110601C-003918 : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
---------+---------+---------+---------+---------+---------+ 262
AMP01_0082_G06.b : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
OVRT1_0100_E03.b : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
OVRT1_0088_E03.b : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
AMP01_0074_D04.b : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
THY01_0112_A01.b : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
DCI01_0099_A02.b : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
DCI01_0098_D04.b : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
LVRM1_0111_A05.b : TATTATGAGGCAACCTCAGAGTGGACCTTGGACTACCCTCCCTTTTTCGCGTGGTTTGAG
20110601C-003918 : TTCGCCCTGTCACATGTTGCCAAGTATTTTGATCAAGAGATGCTGAATGTCCGTAATCTG
---------+---------+---------+---------+---------+---------+ 322
AMP01_0082_G06.b : TTCGCCCTGTCACATGTTGCCAAGTATTTTGATCAAGAGATGCTGAATGTCCGTAATCTG
OVRT1_0100_E03.b : TTCGCCCTGTCACATGTTGCCAAGTATTTTGATCAAGAGATGCTGAATGTCCGTAATCTG
OVRT1_0088_E03.b : TTCGCCCTGTCACATGTTGCCAAGTATTTTGATCAAGAGATGCTGAATGTCCGTAATCTG
AMP01_0074_D04.b : TTCGCCCTGTCATATGTTGCCAAGTATTTTGATCAAGAGATGCCGAATGTCCGTAATCTG
THY01_0112_A01.b : TTCGCCCTGTCACATGTTGCCAAGTATTTTTATCAAGAGATGCTGAATGTCCATAATCTG
DCI01_0099_A02.b : TTTGCCCTGTCACATGTTGCCAAGTATTTTGATCAAGAGATGCTGAATGTCCGTAATCTG
DCI01_0098_D04.b : TTCGCCCTGTCACATGTTGCCAAGTATTTTGATCAAGAGATGCTGAATGTCCGTAATCTG
LVRM1_0111_A05.b : TTCGCCCTGTCACATGTTGCCAAGTATTTTGATCAAGAGATGCTGAATGTCCATAATCTG
20110601C-003918 : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCTGTCATCTTCACAGACGTG
---------+---------+---------+---------+---------+---------+ 382
AMP01_0082_G06.b : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCTGTCATCTTCACAGACGTG
OVRT1_0100_E03.b : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCTGTCATCTTCACAGACGTG
OVRT1_0088_E03.b : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCTGTCATCTTCACAGACGTG
AMP01_0074_D04.b : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCTGTCATCTTCACAGACGTG
THY01_0112_A01.b : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCCGTCATCTTCACAGACGTG
DCI01_0099_A02.b : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCTGTCATCTTCACAGACGTG
DCI01_0098_D04.b : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCTGTCATCTTCACAGACGTG
LVRM1_0111_A05.b : AATTACTCCAGCTCAAGGACCGTGCTCTTCCAGAGGTTTTCCGTCATCTTCACAGACGTG
20110601C-003918 : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCAGGCAAA
---------+---------+---------+---------+---------+---------+ 442
AMP01_0082_G06.b : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCTGGCAAA
OVRT1_0100_E03.b : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCAGGCAAA
OVRT1_0088_E03.b : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCAGGCAAA
AMP01_0074_D04.b : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCAGGCAAA
THY01_0112_A01.b : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCAGGCAAA
DCI01_0099_A02.b : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCAGGCAAA
DCI01_0098_D04.b : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCAGGCAAA
LVRM1_0111_A05.b : CTCTTCGTGTATGCTGTCCATGAGTGCTGTAAGTGCATTGATGGGAAAAAAGCAGGCAAA
20110601C-003918 : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
---------+---------+---------+---------+---------+---------+ 502
AMP01_0082_G06.b : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
OVRT1_0100_E03.b : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
OVRT1_0088_E03.b : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
AMP01_0074_D04.b : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
THY01_0112_A01.b : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
DCI01_0099_A02.b : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
DCI01_0098_D04.b : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
LVRM1_0111_A05.b : GAACTTACAGAGAAGCCAAAGTTTATTCTATCAGTATTACTGCTGTGGAACTTCGGGTTG
20110601C-003918 : TTAATTGTAGACCATATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
---------+---------+---------+---------+---------+---------+ 562
AMP01_0082_G06.b : TTTATTGTAGACCGTATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
OVRT1_0100_E03.b : TTAATTGTAGACCATATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
OVRT1_0088_E03.b : TTAATTGTAGACCATATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
AMP01_0074_D04.b : TTAATTGTAGACCATATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
THY01_0112_A01.b : TTAATTGTAGACCATATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
DCI01_0099_A02.b : TTAATTGTAGACCATATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
DCI01_0098_D04.b : TTAATTGTAGACCATATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
LVRM1_0111_A05.b : TTAATTGTAGACCATATTCACTTCCAGTACAATGGATTTTTATTTGGATTAATGCTACTC
20110601C-003918 : TCCATTGCACGATTATTTCAGAAAAGGCATATGGAAGGAGCATTCCTCTTTGCTGTTCTC
---------+---------+---------+---------+---------+---------+ 622
AMP01_0082_G06.b : TCCATTGTACGATTATTTCAGAAAAGGCATATGGAAGGAGCATTCCTCTTTGCTGTTCTC
OVRT1_0100_E03.b : TCCATTGCACGATTATTTCAGAAAAGGCATATGGAAGGAGCATTCCTCTTTGCTGTTCTC
OVRT1_0088_E03.b : TCCATTGCACGATTATTTCAGAAAAGGCATATGGAAGGAGCATTCCTCTCTGCTGTTCTC
AMP01_0074_D04.b : TCCATTGCACGATTATTTCAGAAAAGGCATATGGAAGGAGCATTCCTCTTTGCTGTTCTC
THY01_0112_A01.b : TCCcttggcccaataattcaaaaaaggcatatgaaggagcctcntcttggctgtctccta
DCI01_0099_A02.b : TCCATTGCACGATTATTTCAGAAAAGGCATATGGAAGGAGCATTCCTCTTTGCTGTTCTC
DCI01_0098_D04.b : TCCATTGCACGATTATTTCAGAAAAGGCATATGGAAGGAGCATTCCTCTTTGCTGTTCTC
LVRM1_0111_A05.b : TCCATTGCACGAGTATTTCAGAAAAGGCATATGGAACGAGGCATCCTCTTTGCTGTTCTC
20110601C-003918 : CTACATTTCAAGCACATCTACCTCTATGTAGCACCAGCTTACGGTATATATCTGCTACGA
---------+---------+---------+---------+---------+---------+ 682
AMP01_0082_G06.b : CTACATTTNCAGCACATCTACCTCTATGTAGCACCAGCTTACGGTATATATCTGCTACGA
OVRT1_0100_E03.b : CTACATTTCAAGCACATCTACCTCTATGTAGCACCAGCTTACGGTATATATCTGCTACGA
OVRT1_0088_E03.b : CTACATTTCAAGCACATCTACCTCTATGTAGCACCAGCTTACGGTATATATCTGCTACGA
AMP01_0074_D04.b : CTACATTTCAAGCACATCTACCTCTATGTAGCACCAGCTTACGGTATATATCCGCTACGA
THY01_0112_A01.b : cattcagccccttttcct
DCI01_0099_A02.b : CTACATTTCAAGCACATCTACCTCTATGTAGCACCAGCTTACGGTATATATCTGCTACGA
DCI01_0098_D04.b : CTACATTTCAAGCACATCTACCTCTATGTAGCACCAGCTTACGGTATATATCTGCTACGA
LVRM1_0111_A05.b : CTACATTTCTAGCACATCTACCTCTATGTGGCACCAGCTTACGGTATAAATCTGCTACGA
20110601C-003918 : TCTTACTGTTTCACTGCAAATAAACCAGATGGGTCCATCCGATGGAACAGCTTCAGCTTT
---------+---------+---------+---------+---------+---------+ 742
AMP01_0082_G06.b : TCTTACTGTTTCACTGNCAATAAACCAGATGGGTCCATCCGATGGAACAGCTTCAGCTTT
OVRT1_0100_E03.b : TCTTACTGTTTCACTGCAAATAAACCAGATGGGTCCATCCGATGGAACAGCTTCAGCTTT
OVRT1_0088_E03.b : TCTTACTGTTTCACTGCAAATAAACCAGATGGGTCCATCCGATGGAACAGCTTCAGCTTT
AMP01_0074_D04.b : TCTTACTGTTTCACTGCAAATAAACCAGATGGGTCCATCCGATGGAACAGCTTCAGCTTT
THY01_0112_A01.b :
DCI01_0099_A02.b : TCTTGCTGTTTCACTGCAAATAAACCAGATGGGTCCATCCGATGGAACAGCTTCAGCTTT
DCI01_0098_D04.b : TCTTACTGTTTCACTGCAAATAAACCAGATGGGTCCATCCGATGGAACAGCTTCAGCTTT
LVRM1_0111_A05.b : TGGTACTGTTTCACTGGAAATAAGCAGGAAGGGGTGCTACAATGGGACAGCTTCAGCGTT
20110601C-003918 : GTTCGTCTTATTTCACTGGGACTGATTGTTTTCCTAGTTTCTGCTCTTTCATTGGGTCCT
---------+---------+---------+---------+---------+---------+ 802
AMP01_0082_G06.b : GTTCGTCTTATTTCACTGGGACTGAATGTTTTCCTAGTTTCTGCTCTTTCATGGGGT*CT
OVRT1_0100_E03.b : GTTCGTCTTATTTCACTGGGACTGATTGTTTTCCTAGNTTCTGCTCTTTCATTGGGTCCT
OVRT1_0088_E03.b : GTTCGTCTTATTTCACTGGGACTGATTGTTTTCCTAGTTTCTGCTCTTTCATTGGGTCCT
AMP01_0074_D04.b : GTTCGTCTTATTTCACTGGGACTGATTGTTTTTCTAGTTTCTGCTCTTTTCATGGGTCCT
THY01_0112_A01.b :
DCI01_0099_A02.b : GTTCGTCTTATTTCACTGGGACTGATTGTTTTCCTAGTTTCTGCTCTTTCATTGGGTCCT
DCI01_0098_D04.b : GTTCGTCTTATTTCACTGGGACTGATTGTTTTCCTAGTTTCTGCTCTTTCATTGGGTCCT
LVRM1_0111_A05.b : GTTCGTCTCACGTCACTGGGAGTGACTGGTTTCCTAGTTTCCGCTCgatcattg
20110601C-003918 : TTTCTAGCCTTGAACCAACTGCCTCCAGTCTTTTCCCGACTCTTCCCTTTCA*GAGGGGC
---------+---------+---------+---------+---------+---------+ 861
AMP01_0082_G06.b : TTTCTAGCCTTGAACCNNACTGCCTCAGTCTTTTCCCGACTCTTTCCTTTCA*GAAGGGC
OVRT1_0100_E03.b : TTTCTAGCCTTGAACCAACTGCCTCAAGTCTTTTCCCGACTCTTCCCTTTCAAGAGGGGC
OVRT1_0088_E03.b : TTTCTAGCCTTGAACCAACTGCCTCAAGTCTTTTCCCGACTCTTCCCTTTTCAGAGGGGC
AMP01_0074_D04.b : TTTCTAGCCNTGACCCA*CTGCCCTCAGTCTTTTCCCGACTCTTCCNNTTCA*GANGGGC
THY01_0112_A01.b :
DCI01_0099_A02.b : TTTCTAGCCTTGAACCANNCTGCT*CAGTCTTTTCC*GACTCTTCCCTTTCA*GAGGGGC
DCI01_0098_D04.b : TTTCTAGCCTTGAACCNACTGNCCTCAGTCTTTTCCCGACTCTCCCCTTTTCAGAGGGGC
LVRM1_0111_A05.b :
20110601C-003918 : CTCTGCCATGCATACTGGGCTCCAAACTCTGGGCTTGTACACGCTTTGGACAAGTGCTGT
---------+---------+---------+---------+---------+---------+ 921
AMP01_0082_G06.b : CTCTNGCATGCACACTGGGCTCCAAACTctgggcttgtacacgctttgnacaagtgctgt
OVRT1_0100_E03.b : CTCTGCCATGCATACTGGGCTCCAAACTtctgggctttgtacaacgctttggacaagtgc
OVRT1_0088_E03.b : CTCTGCCATGCATACTGGGCTCCAAACTtctgggcttttgtacacgcttttgaacaagtg
AMP01_0074_D04.b : CTCTGNCATGCATACTGGGCTCCCAACTtctgggcttttgtacacgctttggacaagtgc
THY01_0112_A01.b :
DCI01_0099_A02.b : CTCTGCCATGCATACTGGGCTCaaacttctgggctttgtaccacgctttgggaaaagtgc
DCI01_0098_D04.b : CTCTGCCATGCATACTGGGCTCCAAACTCTGGGCTTGTACACGCTTTGGACAAGTGCTGT
LVRM1_0111_A05.b :
20110601C-003918 : CTGTCACCGTTTAGCATTGAACTGCTTGACCCAGCAGATTCCC.................
---------+---------+---------+---------+---------+---------+ 964
AMP01_0082_G06.b : ctgtccatcgtttagtattgaactgcttgaccccgcaagatcccaggnnctcatgaccag
OVRT1_0100_E03.b : tgtctgtcatccgtttaccatgaaacctgctgaccccaccagaatcccaagggctcaaga
OVRT1_0088_E03.b : ctgtctgtcatcgntttagcatggaactgcttgaccccagcagattcccagggctcatga
AMP01_0074_D04.b : tgtctgtcatcggttancatgaaactgcctgacccacaagattcccagccccaggaaaat
THY01_0112_A01.b :
DCI01_0099_A02.b : tgtctgtcatcgtttagcattgaaactgcttgaccccagcaagatcccaaggccccatga
DCI01_0098_D04.b : CTGTCACCGTTTAGCATTGAACTGCTTGACCCAGCAGATTCCCaaggctcatgacaatgg
LVRM1_0111_A05.b :
20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 964
AMP01_0082_G06.b : tgtttggtcaacagttcaaaaaacgttcttccctcatggacccgctggccaccctattga
OVRT1_0100_E03.b : caagtgtttggttcanaaattcaaaacacgttcttccctcatgaacccgctggcccctca
OVRT1_0088_E03.b : caatgggttggttcancattccacacccgtccttcctcgtgacccgctggcaactcatct
AMP01_0074_D04.b : ggttgggttaaaattcaaaaaggtcttccctatggaccccggccccccatggaccggatg
THY01_0112_A01.b :
DCI01_0099_A02.b : caattggttggtttacagtcccaacaagggtcctccctccatgacccgctggccccctct
DCI01_0098_D04.b : ttgggttcacagttcaaccaccggtcttcctcaggacccgctgggcacctctctgcactt
LVRM1_0111_A05.b :
20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 964
AMP01_0082_G06.b : ctcggatggcaaatgccccctatttcgccttggtttaacccaggggccaacctttcccag
OVRT1_0100_E03.b : tttgatctgattgcaaaagcccttattttcggcttggtttaaccaagggcaaaactttcc
OVRT1_0088_E03.b : gcctctgatgccaaatgccctcatttcggctttggttaaccccagggccagaccctttcc
AMP01_0074_D04.b : gcaacgccccatttttgttttgttaacccaggccaaccctttcagtggatcttgcctgcc
THY01_0112_A01.b :
DCI01_0099_A02.b : ttgcactcgatggcaaaggcccccattccggcctggttaaacacaggggccaaacctttc
DCI01_0098_D04.b : gaatgcaaaggccccccatttcggcttggtaaacctcaggccccaacccttcccaagggg
LVRM1_0111_A05.b :
20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 964
AMP01_0082_G06.b : atgataattggccgaacccctcggttggggggggccc
OVRT1_0100_E03.b : caaggcgatctttggctgaaccctcagtggggggagccaaaaaaacaaaccctgggttcc
OVRT1_0088_E03.b : aagttgatctttggcctgacccctcagtttgggggatgtcctaaaaaccaaccctgggtt
AMP01_0074_D04.b : cccggtggggaggcgaaacccaactcgtcccaagcttttgggaaaagagttatttataaa
THY01_0112_A01.b :
DCI01_0099_A02.b : caaggcggatttttggcctgacccctcagttgggggggtgcctaaaaccattccc
DCI01_0098_D04.b : aaccttggccttgacccctccgttggggggagtccggaaaacaaaacctgtggtctccaa
LVRM1_0111_A05.b :
20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 964
AMP01_0082_G06.b :
OVRT1_0100_E03.b : caagactttgttgggaaaaggaagtttatttttatttacaaaagaatatcccttcccgtt
OVRT1_0088_E03.b : tccagaaacttttgtgggaaaaaagaatttttatttttattaaaccacaaaatttctttt
AMP01_0074_D04.b : gggattctcccctcgccacccaaccgttttatttccacaaaaaaaatatccccgggggcc
THY01_0112_A01.b :
DCI01_0099_A02.b :
DCI01_0098_D04.b : aacctttttggggaaaagagaaactttttttttttttaccacggaatattcctctccctt
LVRM1_0111_A05.b :
20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 964
AMP01_0082_G06.b :
OVRT1_0100_E03.b : ttggccaaaatccaaaaaaaaggggttaaccaaactccggaaataaaaaaaacttttg
OVRT1_0088_E03.b : cctggcttgcggcaaaccccaaaatccggggtttaccaaaatttcccagaccttaaaaaa
AMP01_0074_D04.b : cccccccctttttnnttggtcgttactaaataccaccacg
THY01_0112_A01.b :
DCI01_0099_A02.b :
DCI01_0098_D04.b :
LVRM1_0111_A05.b :
20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 964
AMP01_0082_G06.b :
OVRT1_0100_E03.b :
OVRT1_0088_E03.b : cctttttgagatttcttgggggcgaaatgatattttcccggaatatttttttctttaggg
AMP01_0074_D04.b :
THY01_0112_A01.b :
DCI01_0099_A02.b :
DCI01_0098_D04.b :
LVRM1_0111_A05.b :
20110601C-003918 : ............................................................
---------+---------+---------+---------+---------+---------+ 964
AMP01_0082_G06.b :
OVRT1_0100_E03.b :
OVRT1_0088_E03.b : agggtaaattacatagaaaa
AMP01_0074_D04.b :
THY01_0112_A01.b :
DCI01_0099_A02.b :
DCI01_0098_D04.b :
LVRM1_0111_A05.b :