[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-003923

Length: 934

Sequence [FASTA format sequence]
GCGAGCTCGC AGCACGTGAG TGAGGCGCTG GGAAAGCAGT AGAGGCATCT GCACGCAAGC
AATCCGTCTC TGGCGTGATG AACTGTTGCG GGCTTTTCCT GCGCTCGGCG GCGGCGGCGC
GCTCCTGCCG AGCCCTCGTG GCCTTTGCCG AGAGCCGGCG ACTGCTGCGC ACCAGTCAGC
CCAGCCGAGC TTTCGCCAAG GAGCTCTTCC TGGGCAGAAT CGAGAAGAAA GAAGTTTTCC
CGTTCCCAGA AGTTAGCCAA GATGAACTTA ATGAAATCAA TCAGTTTGTG GGACCTGTAG
AAAAATTCTT CACTGAAGAG GTGGACTCTC AAAAAATCGA CCGTGAGGGA AAAATCCCAA
ATGAAACCTT AGAGAAACTG AAGAGCCTGG GGCTTTTTGG GATGCAGGTC CCGGAAGAAT
ACGGTGGCCT GGGCCTCTCC AGCACCATGT ATGCGCGGTT GTGCGAGATC ATCAGCCTGG
ACAGCTCCAT CGCTGTGACC CTGGCGGCAC ACCAGGCCAT CGGCCTCAAG GGCATCATCA
TGACTGGCAG CGAGGAGCAG AAGGCCAAGT ACCTGCCCAA ACTGGCGTCT GGGGAGCACA
TGGCCGCCTT CTGCCTGACG GAACCAGCCA GTGGGAGTGA TGCCGCCTCC ATCCGGACCA
GGGCCACACT GAGCGAAGAT AAGAAACACT ATGTCCTCAA TGGCTCCAAG GTCTGGATCA
CCAATGGGGG GCTGGCCAGT GTTTTTACTG TGTTTGCGAA GACCGAGGTT GTTGACTCCG
ACGGCTCAGT AAAGGACAAG ATCACAGCAT TCATAGTAGA GAGGGACTTT GGTGGAGTCA
CCAGCGGGAA ACCAGAGGAT AAGCTAGGCA TCCGAGGCTC CAACACCTGC GAGGTCCACT
TCGAGAAACA CCGGGTGCCC GTGGAAAATG TCCT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinACAD9acyl-CoA dehydrogenase family member 9, mitochondrial precursor [Homo sapiens]. 465e-131O
Contig/Assembly ProteinACADVLvery long-chain specific acyl-CoA dehydrogenase, mitochondrial isoform 2 precursor [Homo sapiens]. 2763e-74O
Contig/Assembly ProteinACADVLvery long-chain specific acyl-CoA dehydrogenase, mitochondrial isoform 1 precursor [Homo sapiens]. 2741e-73
Contig/Assembly ProteinIVDisovaleryl-CoA dehydrogenase, mitochondrial isoform 1 precursor [Homo sapiens]. 1548e-38O
Contig/Assembly ProteinIVDisovaleryl-CoA dehydrogenase, mitochondrial isoform 2 precursor [Homo sapiens]. 1471e-35O
Contig/Assembly ProteinACADSshort-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Homo sapiens]. 1355e-32O
Contig/Assembly ProteinACADSBshort/branched chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Homo sapiens]. 1332e-31O
Contig/Assembly ProteinACADMmedium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform b precursor [Homo sapiens]. 1301e-30O
Contig/Assembly ProteinACADMmedium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform a precursor [Homo sapiens]. 1301e-30O
Contig/Assembly ProteinGCDHglutaryl-CoA dehydrogenase, mitochondrial isoform b precursor [Homo sapiens]. 1187e-27O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAcad9acyl-CoA dehydrogenase family member 9, mitochondrial precursor [Mus musculus]. 438e-123O
Contig/Assembly ProteinAcadvlvery long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]. 2783e-75
Contig/Assembly ProteinIvdisovaleryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]. 1578e-39O
Contig/Assembly ProteinAcadmmedium-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]. 1332e-31O
Contig/Assembly ProteinAcadsshort-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]. 1325e-31O
Contig/Assembly ProteinAcadsbshort/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Mus musculus]. 1271e-29O
Contig/Assembly ProteinAcadllong-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]. 1088e-24O
Contig/Assembly ProteinAcad8isobutyryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]. 1072e-23O
Contig/Assembly ProteinGcdhglutaryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]. 1062e-23O
Contig/Assembly ProteinGcdhglutaryl-CoA dehydrogenase, mitochondrial precursor [Mus musculus]. 1062e-23O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC476519PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member 9 isoform 1 [Canis familiaris]. 468e-132O
Contig/Assembly ProteinLOC476519PREDICTED: similar to acyl-Coenzyme A dehydrogenase family, member 9 isoform 3 [Canis familiaris]. 468e-132O
Contig/Assembly ProteinLOC489463PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain specific, mitochondrial precursor (VLCAD) isoform 6 [Canis familiaris]. 2856e-77
Contig/Assembly ProteinLOC489463PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain specific, mitochondrial precursor (VLCAD) isoform 1 [Canis familiaris]. 2856e-77
Contig/Assembly ProteinLOC489463PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain specific, mitochondrial precursor (VLCAD) isoform 7 [Canis familiaris]. 2856e-77
Contig/Assembly ProteinLOC489463PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain specific, mitochondrial precursor (VLCAD) isoform 5 [Canis familiaris]. 2471e-65
Contig/Assembly ProteinLOC489463PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain specific, mitochondrial precursor (VLCAD) isoform 4 [Canis familiaris]. 2247e-59
Contig/Assembly ProteinLOC489463PREDICTED: similar to Acyl-CoA dehydrogenase, very-long-chain specific, mitochondrial precursor (VLCAD) isoform 3 [Canis familiaris]. 1901e-48
Contig/Assembly ProteinLOC478259PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial precursor (IVD) isoform 1 [Canis familiaris]. 1524e-37O
Contig/Assembly ProteinLOC478259PREDICTED: similar to Isovaleryl-CoA dehydrogenase, mitochondrial precursor (IVD) isoform 3 [Canis familiaris]. 1494e-36O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinACAD9acyl-CoA dehydrogenase family member 9, mitochondrial [Bos taurus]. 456e-128O
Contig/Assembly ProteinACADVLvery long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]. 2823e-76
Contig/Assembly ProteinIVDisovaleryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]. 1571e-38O
Contig/Assembly ProteinACADSBshort/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Bos taurus]. 1332e-31O
Contig/Assembly ProteinACADMmedium-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]. 1301e-30O
Contig/Assembly ProteinACADSshort-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]. 1301e-30O
Contig/Assembly ProteinACADLlong-chain specific acyl-CoA dehydrogenase, mitochondrial [Bos taurus]. 1111e-24O
Contig/Assembly ProteinGCDHglutaryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]. 1102e-24O
Contig/Assembly ProteinACAD8isobutyryl-CoA dehydrogenase, mitochondrial precursor [Bos taurus]. 1093e-24O
Contig/Assembly ProteinLOC513508PREDICTED: acyl-Coenzyme A dehydrogenase family, member 10 [Bos taurus]. 76.34e-14


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100622764PREDICTED: very long-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Sus scrofa]. 2815e-76
Contig/Assembly ProteinLOC100520636PREDICTED: very long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform 2 [Sus scrofa]. 2815e-76O
Contig/Assembly ProteinLOC100520636PREDICTED: very long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform 1 [Sus scrofa]. 2815e-76
Contig/Assembly ProteinLOC100621922PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial-like, partial [Sus scrofa]. 1961e-50O
Contig/Assembly ProteinIVDisovaleryl-CoA dehydrogenase, mitochondrial [Sus scrofa]. 1523e-37O
Contig/Assembly ProteinLOC100521171PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like [Sus scrofa]. 1384e-33O
Contig/Assembly ProteinACADSBPREDICTED: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial [Sus scrofa]. 1362e-32O
Contig/Assembly ProteinACADSshort-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Sus scrofa]. 1347e-32O
Contig/Assembly ProteinACADMmedium-chain specific acyl-CoA dehydrogenase, mitochondrial precursor [Sus scrofa]. 1308e-31O
Contig/Assembly ProteinLOC100522477PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like isoform 2 [Sus scrofa]. 1146e-26O


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
BFLT10104G04BFLT1_0104_G04.bHX202090 AK400221
LVR010039B03LVR01_0039_B03.bBP442042 
OVRM10083F09OVRM1_0083_F09.bBP152019 
PBL010100A09PBL01_0100_A09.bBW974932 
PTG010016C09PTG01_0016_C09.bFS705813 
TCH010083C01TCH01_0083_C01.bCJ028441 AK398063
TCH010103E01TCH01_0103_E01.bCJ029988 
UTR010063C12UTR01_0063_C12.bBP463524 AK240398

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
434C600.750WSGGC/G
T110.250GGT/G
701C210.429WSAAC/N
T400.571AAT/N


Alignment:      TOP

20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
BFLT1_0104_G04.b : nnnnccgttagcgnaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PTG01_0016_C09.b : nnnccgtacttnnnnggctaaagcagcxxxxxxxxxxxxxxxxx
TCH01_0083_C01.b : nnnnggctaggactatgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0063_C12.b : gcatcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0039_B03.b : acaaaagcttagtgacntatagacxxxxxxxxxx
PBL01_0100_A09.b :
TCH01_0103_E01.b : nnnnggct
OVRM1_0083_F09.b :
20110601C-003923 : ............GCGAGCTCGCAGCACGTGAGTGAGGCGCTGGGAAAGCAGTAGAGGCAT
---------+---------+---------+---------+---------+---------+ 48
BFLT1_0104_G04.b : xxxxxxxxxxxxGCGAGCTCGCAGCACGTGAGTGAGGCGCTGGGAAAGCAGTAGAGGCAT
PTG01_0016_C09.b : xxxxxxxxxxxxxxxxxxxxxxxGCACGTGAGTGAGGCGCTGGGAAAGCAGTAGAGGCAT
TCH01_0083_C01.b : xxxxxxxxxxxxxxxxxxaggcaGCACGTGAGTGAGGCGCTGGGAAAGCAGTAGAGGCAT
UTR01_0063_C12.b : xxxxxxxxxxxxxxxxxxxxxxaGCACGTGAGTGAAGCGCTGGGAAAGCAGTAGAGGCAT
LVR01_0039_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGGCAT
PBL01_0100_A09.b : nnnnggtgaagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0103_E01.b : aggactatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0083_F09.b : agttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-003923 : CTGCACGCAAGCAATCCGTCTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
---------+---------+---------+---------+---------+---------+ 108
BFLT1_0104_G04.b : CTGCACGCAAGCAATCCGTCTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
PTG01_0016_C09.b : CTGCACGCAAGCAATCCGTCTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
TCH01_0083_C01.b : CTGCACGCAAGCAATCCGTCTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
UTR01_0063_C12.b : CTGCACGCAAGCAATCCGTCTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
LVR01_0039_B03.b : CTGCACGCAAGCAATCCGTCTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
PBL01_0100_A09.b : xxxxxxxxxxxxAATCCGTCTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
TCH01_0103_E01.b : xxxxxxxxxxxxxxTCCGTCTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
OVRM1_0083_F09.b : xxxxxxxxxxxxxxxxxxxxTCTGGCGTGATGAACTGTTGCGGGCTTTTCCTGCGCTCGG
20110601C-003923 : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGACTGCTGC
---------+---------+---------+---------+---------+---------+ 168
BFLT1_0104_G04.b : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGACTGCTGC
PTG01_0016_C09.b : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGACTGCTGC
TCH01_0083_C01.b : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGACTGCTGC
UTR01_0063_C12.b : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGACTGCTGC
LVR01_0039_B03.b : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGACTGCTGC
PBL01_0100_A09.b : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGACTGCTGC
TCH01_0103_E01.b : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGATTGCTGC
OVRM1_0083_F09.b : CGGCGGCGGCGCGCTCCTGCCGAGCCCTCGTGGCCTTTGCCGAGAGCCGGCGACTGCTGC
20110601C-003923 : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
---------+---------+---------+---------+---------+---------+ 228
BFLT1_0104_G04.b : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
PTG01_0016_C09.b : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
TCH01_0083_C01.b : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
UTR01_0063_C12.b : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
LVR01_0039_B03.b : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
PBL01_0100_A09.b : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
TCH01_0103_E01.b : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
OVRM1_0083_F09.b : GCACCAGTCAGCCCAGCCGAGCTTTCGCCAAGGAGCTCTTCCTGGGCAGAATCGAGAAGA
20110601C-003923 : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
---------+---------+---------+---------+---------+---------+ 288
BFLT1_0104_G04.b : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
PTG01_0016_C09.b : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
TCH01_0083_C01.b : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
UTR01_0063_C12.b : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
LVR01_0039_B03.b : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
PBL01_0100_A09.b : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
TCH01_0103_E01.b : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
OVRM1_0083_F09.b : AAGAAGTTTTCCCGTTCCCAGAAGTTAGCCAAGATGAACTTAATGAAATCAATCAGTTTG
20110601C-003923 : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
---------+---------+---------+---------+---------+---------+ 348
BFLT1_0104_G04.b : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
PTG01_0016_C09.b : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
TCH01_0083_C01.b : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
UTR01_0063_C12.b : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
LVR01_0039_B03.b : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
PBL01_0100_A09.b : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
TCH01_0103_E01.b : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
OVRM1_0083_F09.b : TGGGACCTGTAGAAAAATTCTTCACTGAAGAGGTGGACTCTCAAAAAATCGACCGTGAGG
20110601C-003923 : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
---------+---------+---------+---------+---------+---------+ 408
BFLT1_0104_G04.b : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
PTG01_0016_C09.b : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
TCH01_0083_C01.b : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
UTR01_0063_C12.b : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
LVR01_0039_B03.b : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
PBL01_0100_A09.b : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
TCH01_0103_E01.b : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
OVRM1_0083_F09.b : GAAAAATCCCAAATGAAACCTTAGAGAAACTGAAGAGCCTGGGGCTTTTTGGGATGCAGG
20110601C-003923 : TCCCGGAAGAATACGGTGGCCTGGGCCTCTCCAGCACCATGTATGCGCGGTTGTGCGAGA
---------+---------+---------+---------+---------+---------+ 468
BFLT1_0104_G04.b : TCCCGGAAGAATACGGTGGCCTGGGTCTCTCCAGCACCATGTATGCGCGGTTGTGCGAGA
PTG01_0016_C09.b : TCCCGGAAGAATACGGTGGCCTGGGCCTCTCCAGTACCATGTATGCGCGGTTGTGCGAGA
TCH01_0083_C01.b : TCCCGGAAGAATACGGTGGCCTGGGCCTCTCCAGCACCATGTATGCGCGGTTGTGCGAGA
UTR01_0063_C12.b : TCCCGGAAGAATACGGTGGCCTGGGCCTCCCCAGCACCATGTATGCGCGGTTGTGCGAGA
LVR01_0039_B03.b : TCCCGGAAGAATACGGTGGCCTGGGCCTCTCCAGCACCATGTATGCGCGGTTGTGCGAGA
PBL01_0100_A09.b : TCCCGGAAGAATACGGTGGCCTGGGCCTCTCCAGCACCATGTATGCGCGGTTGTGCGAGA
TCH01_0103_E01.b : TCCCGGAAGAATACGGTGGCCTGGGCCTCTCCAGCACCATGTATGCGCGGTTGTGCGAGA
OVRM1_0083_F09.b : TCCCGGAAGAATACGGTGGCCTGGGTCTCTCCAGCACCATGTATGCGCGGTTGTGCGAGA
20110601C-003923 : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
---------+---------+---------+---------+---------+---------+ 528
BFLT1_0104_G04.b : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
PTG01_0016_C09.b : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
TCH01_0083_C01.b : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
UTR01_0063_C12.b : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
LVR01_0039_B03.b : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
PBL01_0100_A09.b : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
TCH01_0103_E01.b : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
OVRM1_0083_F09.b : TCATCAGCCTGGACAGCTCCATCGCTGTGACCCTGGCGGCACACCAGGCCATCGGCCTCA
20110601C-003923 : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
---------+---------+---------+---------+---------+---------+ 588
BFLT1_0104_G04.b : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
PTG01_0016_C09.b : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
TCH01_0083_C01.b : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
UTR01_0063_C12.b : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
LVR01_0039_B03.b : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
PBL01_0100_A09.b : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
TCH01_0103_E01.b : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
OVRM1_0083_F09.b : AGGGCATCATCATGACTGGCAGCGAGGAGCAGAAGGCCAAGTACCTGCCCAAACTGGCGT
20110601C-003923 : CTGGGGAGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGCCT
---------+---------+---------+---------+---------+---------+ 648
BFLT1_0104_G04.b : CTGGGGAGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGCCT
PTG01_0016_C09.b : CTGGGGTGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGCCT
TCH01_0083_C01.b : CTGGGGAGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGCCT
UTR01_0063_C12.b : CTGGGGAGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGCCT
LVR01_0039_B03.b : CTGGGGAGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGCCT
PBL01_0100_A09.b : CTGGGGAGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGTCT
TCH01_0103_E01.b : CTGGGGAGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGCCT
OVRM1_0083_F09.b : CTGGGGAGCACATGGCCGCCTTCTGCCTGACGGAACCAGCCAGTGGGAGTGATGCCGCCT
20110601C-003923 : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAATGGCTCCA
---------+---------+---------+---------+---------+---------+ 708
BFLT1_0104_G04.b : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAACGGCTCCA
PTG01_0016_C09.b : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAATGGCTCCN
TCH01_0083_C01.b : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAATGGCTCCA
UTR01_0063_C12.b : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAATGGCTCCA
LVR01_0039_B03.b : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAACGGCTCCA
PBL01_0100_A09.b : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAATGGCTCCA
TCH01_0103_E01.b : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAATGGCTCCA
OVRM1_0083_F09.b : CCATCCGGACCAGGGCCACACTGAGCGAAGATAAGAAACACTATGTCCTCAACGGCTCCA
20110601C-003923 : AGGTCTGGATCACCAATGGGGGGCTGGCCAGTGTTTTTACTGTGTTTGCGAAGACCGAGG
---------+---------+---------+---------+---------+---------+ 768
BFLT1_0104_G04.b : AGGTCTGGATCACCAATGGGGGGCTGGGCAGTGTTTTTACTGTGTTTGCGAAGAACGAGG
PTG01_0016_C09.b : AGGTCTGGATCACCAATGGGGGGCTGGCCAGTGTTTTTACTGTGTTTGCGAAGACCGAGG
TCH01_0083_C01.b : AGGTCTGGATCACCAATGGGGGGCTGGCCAGTGTTTTTACTGTGTTTGCGAAGACCGAGG
UTR01_0063_C12.b : AGGTCTGGATCACCAATGGGGGGCTGGCCAGTGTTTTTACTGTGTTTGCGAAGACCGAGG
LVR01_0039_B03.b : AGGTCTGGATCACCAATGGGGGGCTGGCCAGTGTTTTTACTGTGTTTGCGAAGACCGAGG
PBL01_0100_A09.b : AGGTCTGGATCACCAATGGGGGGCTGGCCAGTGTTTTTACTGTGTTTGCGAAGACCGAGG
TCH01_0103_E01.b : AGGTCTGGATCACCAATGGGGGGCTGGCCAGTGTTTTTACTGTGTTTGCGAAGACCGAGG
OVRM1_0083_F09.b : AGGTCTGGATCACCAATGGGGGGCTGGCCAGTGTTTTTACTGTGTTTGCGAAGACCGAGG
20110601C-003923 : TTGTTGACTCCGACGGCTCAGTAAAGGACAAGATCACAGCATTCATAGTAGAGAGGGACT
---------+---------+---------+---------+---------+---------+ 828
BFLT1_0104_G04.b : TTTGTGACTCCGACNGCTCAGTAAAGGAACAGATCACAGCATTCATAGTAGAGAAGGACT
PTG01_0016_C09.b : TTGTTGACTCCGACGGCTCAGTAAAGGACAAGATCACAGCATTCATAGTAAAGAGGGACT
TCH01_0083_C01.b : TTGTTGACTCCGACNGCTCAGTAAAGGACAAGATCACAGCATTCATAGTAGAGAGGGACT
UTR01_0063_C12.b : TTGTTGATTCCGACGGCTCAGTAAAGGACAAGATCACAGCATTCATAGTAGAGAGGGACT
LVR01_0039_B03.b : TTGTTGACTCCGACGGCTCAGTNAAGGACAAGATCACAGCATTCATAGTAGAGAGGGACT
PBL01_0100_A09.b : TTGTTGACTCCGACGGCTCAGTAAAGGACAAGATCACAGCATTCATAGTAGAGAGGGACT
TCH01_0103_E01.b : TTGTTGACTCCGACGGCTCAGTAAAGGACAAGATCACAGCATTCATAGTAGAGAGGGACT
OVRM1_0083_F09.b : TTGTTGACTCCGACGGCTCAGTAAAGGACAAGATCACAGCATTCATAGTAGAGAGGGACT
20110601C-003923 : TTGGTGGAGTCACCAGCGGGAAACCAGAGGATAAGCTAGGCATCCGAGGCTCCAACACCT
---------+---------+---------+---------+---------+---------+ 888
BFLT1_0104_G04.b : TTTGTGGAtcaccagcgggaaacaaaagataagctaggcatccgaggctccacacctgcg
PTG01_0016_C09.b : TTGGTGGAGTCACagcgggaaacccagagaataactaagcatccgaggctccaaccctgc
TCH01_0083_C01.b : TTGGTGGAGTCACCAGCGGGGAACCAGAGGATAAGCTAGGCATCCGAGGCTCCA*CACCT
UTR01_0063_C12.b : TTGGTGGAGTCACCAGCGGGAAAACAGAGGATAAACTAGGCATCCGAGGCTCCAACACCT
LVR01_0039_B03.b : TTGGTGGAGTCACCAGCGGGAAACCAGAGGATAAGCTAGGCATCCGAGGCTCCAACACCT
PBL01_0100_A09.b : TTGGTGGAGTCACCAGCGGGAAACCAGAGGAATAGCTAGGCATCCGAGGCTCCAACACCT
TCH01_0103_E01.b : TTGGTGGAGTCACCAGCGGGAAACCAGAGGATAAGCTAGGCATCCGAGGCTCCNACACCT
OVRM1_0083_F09.b : TTGGTGGAGTCccagcgggaa
20110601C-003923 : GCGAGGTCCACTTCGAGAAACACCGGGTGCCCGTGGAAAATGTCCT..............
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b : aggtcaacttcaaacccccggtgcccgtgaaaatgtcttcgaaaaatttgcggcgcttta
PTG01_0016_C09.b : gaggtccactcaagaacccccggtgcccgtggaaatgtcttcgaaaatttggcggcggct
TCH01_0083_C01.b : GCGAGGTCCACTcgagaaacaccgggtgcccgtggaaatgtcctcggagaagtggcggcg
UTR01_0063_C12.b : GCGAGGTCCACTTCGAGAACACCCGGGTGCCCGTGGAAAATGTCCTcggaaaagttggcg
LVR01_0039_B03.b : GCGAGGTCCACTtcgagaacacccgggtgcccgtggaaaatgtcctcggagaagttggcg
PBL01_0100_A09.b : GCGAGGTCCACTTCGAGAAACACCGGGTGCCCGTGGAAAatgtcctcggagaagttggcg
TCH01_0103_E01.b : GCGAGGTCCACTTCGAGAAACACCGGGTGCCCGTGGAAAATGTCCTcggagaaagtgggc
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b : aggggcataaaatctcaaaagggggcttcacatgggagcaggggctggaatgccaaaacc
PTG01_0016_C09.b : taagggggcatgacatccccaaaacgggccttcccctgggcacccggggcctggatgccc
TCH01_0083_C01.b : gctttaggtggccatgaacatctcaacaacggcgcttcacatgggcagccgggggctggg
UTR01_0063_C12.b : gccgctttaaaggtggccatgaacatcctcaacagcgggcgctttcaccctgggcagcaa
LVR01_0039_B03.b : gcggcttttaggtggccatgaacctcctccacagccggcgcttcagcatgggcagcacgg
PBL01_0100_A09.b : gcggcttttaggtggcccatgacatccntcacagcgggcgcttcancatgggcagcacgg
TCH01_0103_E01.b : gcggctttnaggtggnncatgacatccctcacagcgggcgcttcagcatgggcagcacgn
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b : cttgaataacgccaatacctggcaaagaaaattcacggacctcacgatttgattttcgga
PTG01_0016_C09.b : aaaaccctttaatggctggccaaacccggccaagaaaatttcaaggaccctccaatttgg
TCH01_0083_C01.b : atgctcagaacctcttgaatgacgccaagaccctgcccaggaaaaattcacaggaccccc
UTR01_0063_C12.b : cgtgggctgggatggtcaaaaaactcattgaaatgactgccgaataacccctgcccgaag
LVR01_0039_B03.b : gtggctgggatgctcaaaaaacttctttgaaatgactgcccaagtacgccctggcccgaa
PBL01_0100_A09.b : tggctgggatgctcaaaaaactcattgaantggactgcgagtacgcctgcccgaggaaca
TCH01_0103_E01.b : tggctgggatgctcaagaaactcattgaaatgactgccgagtacgccctgcacgagaaca
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b : aatttccttggcccaaagttactgaggaattggtacccccgggggttgacccgggttcta
PTG01_0016_C09.b : attttcggaaaatttccctttggcccaaggttcctttggaaattggtttcccccgggggg
TCH01_0083_C01.b : ccggttggatgattcggaaaatttgcttgatgtccaaaggttctgagggaattggctact
UTR01_0063_C12.b : aaaaaagtttcaacaggaac
LVR01_0039_B03.b : ggaaaacagtttccaacaggcaccctccacccaaggttttggatttgatttcccggggaa
PBL01_0100_A09.b : gttcaacagaccctcacgagtttggatgattcaggagaagtttgcctgatggctcaaaag
TCH01_0103_E01.b : gttcacaggaccctcagcgagtttggatgattcagagagtttgccctgatggctcnaagg
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b : attccaaaccccgtaaggtgtccaagggcggggggtggagtccaactgggggcaaaaaac
PTG01_0016_C09.b : tttggaccccgggtttcctagttctcccaccccatttaaggttttcccagaggcgcgggg
TCH01_0083_C01.b : cccccggatgtggaccccgggttctgagttctcaaacccctatgaagggtcctcaaggcc
UTR01_0063_C12.b :
LVR01_0039_B03.b : aaatttttggcccttgtatggggcctctaaaaaggggcttttcccgtgggagaggggaaa
PBL01_0100_A09.b : gctacctgatggaagtatgcttacctcacggcaggatgtgggacaaccggggtttctgac
TCH01_0103_E01.b : gctacctgatggaagtatggcttacctcccgcaggaagttggacgcctgggtttctgacg
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b : acaaaccctcggaccttccctctgaaaaattttattctccgcccccggcctcggggaaag
PTG01_0016_C09.b : tggaaaggttcaactgggggcccccaaaaaaaccccaaaacccctggaaacctccccttt
TCH01_0083_C01.b : gggagggga
UTR01_0063_C12.b :
LVR01_0039_B03.b : aaaggttatggggggctttttcccctctccccccgggggggcccgggggggaaaagtttg
PBL01_0100_A09.b : tggtcatcgagccgcctaatgaaggtgtcacctcaaaggcgcttgnaatgctggaccagc
TCH01_0103_E01.b : gtcatcgagccgccatatggagggttcacctcaagggccccggaaggctggaacaagctt
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b : aatcccaggggggctccccaaagagaggccctggnnaattnnttcaaataacttgtccca
PTG01_0016_C09.b : tggaaaaaatttgttaattccacccctccggggcgtcacgggaaaaaaaaggagccccca
TCH01_0083_C01.b :
UTR01_0063_C12.b :
LVR01_0039_B03.b : gt
PBL01_0100_A09.b : tttccaatcctgggggtcagcttattaaagatacccgatgaaccttccgggggaaccctt
TCH01_0103_E01.b : ccaaacttggggcccggctatgtaggaacccgttgaggcccccgcgggaa
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b : caacctcatannnnnnnnnnnnnnnngtgtcgt
PTG01_0016_C09.b : gaggggggggctccccccaaacggaaaattctttgggcacaaaatttaagttt
TCH01_0083_C01.b :
UTR01_0063_C12.b :
LVR01_0039_B03.b :
PBL01_0100_A09.b : ttctctttttgaggagacaaaaatcccagatatatcccaaaagcttaaaaggggggtcta
TCH01_0103_E01.b :
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b :
PTG01_0016_C09.b :
TCH01_0083_C01.b :
UTR01_0063_C12.b :
LVR01_0039_B03.b :
PBL01_0100_A09.b : tatagggtgaagataaagggatgtgaccctcgaaaaggtggggggttggacttgcccaca
TCH01_0103_E01.b :
OVRM1_0083_F09.b :
20110601C-003923 : ............................................................
---------+---------+---------+---------+---------+---------+ 934
BFLT1_0104_G04.b :
PTG01_0016_C09.b :
TCH01_0083_C01.b :
UTR01_0063_C12.b :
LVR01_0039_B03.b :
PBL01_0100_A09.b : aaagggggggagagggtg
TCH01_0103_E01.b :
OVRM1_0083_F09.b :