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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-003950

Length: 1,305

Sequence [FASTA format sequence]
AGCGCGTCGG GCGGTGGCGG GATTCGGCCG CGTGTGCTCT CCAGCCCCAG CTCGCCCTGC
GCTCGCGGCT CTTTGGGCGG CCGGTCCAGT CCTGCCAGCC AGCGTTGTGG TTGCTCTCTC
GCGGCTCTGC GCGCCCCTCC TTCCCCCCAG TTTCCTCCAG AGGCCAGGCC CCGCCCGTTT
CCCGTCTCCC GGGCCTGGTT CGTTCCCGCC CCAGCCCGCC CCTCTCTGTG CCCCTGCTGC
CTCTGCTGGA GGCGGAGGCT CCATGTTGTC CCCTCAGCGA GCGGTAGCGG CTGCATCGCG
AGGAGCAGGT GATGCCATGG AGGGTGGAAA GCCTGGTCCC GTGCAGGTTG TTATGGTTCA
GAAAGACCAA CATTCCTTTG AGCTAGAAGA GAAAGCCTTG GCCAGCATCC TCTTACAGGA
CCACATCCGA GACCTTGATG TGGTGGTGGT GTCGGTGGCT GGTGCCTTCC GAAAGGGCAA
GTCCTTCTTT CTGGACTTTA TGCTGCGATA CTTATATTTC CAGAAGGAAG GTGGCCATTC
AAATTGGTTG GGTGACCCCG AAGAACCGTT AACAGGGTTT TCATGGAGAG GGGGCTCTGA
CCCAGAAACC ACTGGGATTC AGATCTGGAA TGAAGTGTTC ACTGTGGAGA AGCCAGGCGG
GAAGAAGGTT GCAGTTGTTC TGATGGACAC CCAGGGTGCA TTTGACAGCC AGTCCACTGT
GAAAGACTGT GCTACCATCT TTGCTCTAAG CACCATGACT AGTTCTGTTC AGATTTATAA
TTTGTCTCAG AACATTCAGG AAGATGATCT TCAACAGCTA CAGCTCTTCA CAGAATATGG
TCGTCTAGCG ATGGATGAAA TTTTCCAAAA GCCCTTCCAG ACACTGATGT TTTTGGTTCG
AGACTGGAGT TTCCCTTATG AATACAACTA TGGACTACAA GGAGGAATGT CATTTTTGGA
GAAGCGTCTA CAGGTGAAAG AACATCAACA TGAAGAAATT CAGAACGTCC GAAATCACAT
TCACTCCTGT TTCTCCAGTG TCACCTGTTT CCTCCTCCCA CATCCAGGAC TCCGGGTGGC
CACAAGCCCT GACTTTGACG GCAAATTGAA AGATATTGAT AGTGAATTCA AAGAGCAGTT
ACAGATACTG ATACCATATG TATTAAACCC AGCTAACTTA ATGGAAAAGG AAATCAATGG
CTCAAAAGTC ACCTGTCGGG GGCTACTGGA GTATTTTAGG CATACATTAA AATCTACCAG
GGAGAGATCT GCCTCACCCC CAGTCATGCT TCAAGCCACT GCTGA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinATL3atlastin-3 [Homo sapiens]. 604e-173O
Contig/Assembly ProteinATL2atlastin-2 isoform 2 [Homo sapiens]. 484e-137O
Contig/Assembly ProteinATL2atlastin-2 isoform 1 [Homo sapiens]. 484e-137O
Contig/Assembly ProteinATL1atlastin-1 isoform b [Homo sapiens]. 457e-128O
Contig/Assembly ProteinATL1atlastin-1 isoform b [Homo sapiens]. 457e-128O
Contig/Assembly ProteinATL1atlastin-1 isoform a [Homo sapiens]. 457e-128O
Contig/Assembly ProteinRNF112RING finger protein 112 [Homo sapiens]. 86.36e-17
Contig/Assembly ProteinGBP6guanylate-binding protein 6 [Homo sapiens]. 64.32e-10O
Contig/Assembly ProteinGBP2interferon-induced guanylate-binding protein 2 [Homo sapiens]. 63.93e-10O
Contig/Assembly ProteinGBP5guanylate-binding protein 5 [Homo sapiens]. 621e-09O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAtl3atlastin-3 isoform 2 [Mus musculus]. 597e-171O
Contig/Assembly ProteinAtl3atlastin-3 isoform 1 [Mus musculus]. 593e-169O
Contig/Assembly ProteinAtl2atlastin-2 isoform 1 [Mus musculus]. 484e-137O
Contig/Assembly ProteinAtl1atlastin-1 [Mus musculus]. 453e-127O
Contig/Assembly ProteinAtl2atlastin-2 isoform 2 [Mus musculus]. 3256e-89O
Contig/Assembly ProteinRnf112RING finger protein 112 [Mus musculus]. 81.61e-15
Contig/Assembly ProteinGbp11guanylate binding protein 11 [Mus musculus]. 68.98e-12O
Contig/Assembly ProteinGbp2interferon-induced guanylate-binding protein 2 [Mus musculus]. 65.59e-11O
Contig/Assembly ProteinGbp9guanylate binding protein family, member 9 [Mus musculus]. 62.86e-10O
Contig/Assembly ProteinGbp6guanylate binding protein 6 [Mus musculus]. 59.75e-09O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC476044PREDICTED: similar to atlastin-like [Canis familiaris]. 610e-175O
Contig/Assembly ProteinLOC475728PREDICTED: similar to ADP-ribosylation factor-like 6 interacting protein 2 isoform 3 [Canis familiaris]. 484e-137O
Contig/Assembly ProteinLOC475728PREDICTED: similar to ADP-ribosylation factor-like 6 interacting protein 2 isoform 2 [Canis familiaris]. 484e-137O
Contig/Assembly ProteinLOC475728PREDICTED: similar to ADP-ribosylation factor-like 6 interacting protein 2 isoform 5 [Canis familiaris]. 484e-137O
Contig/Assembly ProteinLOC475728PREDICTED: similar to ADP-ribosylation factor-like 6 interacting protein 2 isoform 4 [Canis familiaris]. 484e-137O
Contig/Assembly ProteinLOC480318PREDICTED: similar to atlastin isoform 4 [Canis familiaris]. 459e-129O
Contig/Assembly ProteinLOC480318PREDICTED: similar to atlastin; guanylate-binding protein 3 isoform 1 [Canis familiaris]. 459e-129O
Contig/Assembly ProteinLOC480318PREDICTED: similar to atlastin; guanylate-binding protein 3 isoform 2 [Canis familiaris]. 459e-129O
Contig/Assembly ProteinLOC475728PREDICTED: similar to ADP-ribosylation factor-like 6 interacting protein 2 isoform 7 [Canis familiaris]. 3258e-89O
Contig/Assembly ProteinLOC480318PREDICTED: similar to atlastin; guanylate-binding protein 3 isoform 3 [Canis familiaris]. 2088e-54O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinATL3atlastin-3 [Bos taurus]. 617e-177O
Contig/Assembly ProteinATL2atlastin-2 [Bos taurus]. 486e-137O
Contig/Assembly ProteinATL1atlastin-1 [Bos taurus]. 456e-128O
Contig/Assembly ProteinRNF112RING finger protein 112 [Bos taurus]. 80.92e-15
Contig/Assembly ProteinLOC781484PREDICTED: guanylate binding protein 4-like [Bos taurus]. 721e-12O
Contig/Assembly ProteinGBP4guanylate binding protein 4 [Bos taurus]. 70.53e-12O
Contig/Assembly ProteinLOC507055PREDICTED: guanylate binding protein 4-like [Bos taurus]. 70.53e-12O
Contig/Assembly ProteinLOC100298387PREDICTED: guanylate binding protein 4-like [Bos taurus]. 66.65e-11O
Contig/Assembly ProteinGBP6PREDICTED: guanylate binding protein family, member 6-like [Bos taurus]. 65.51e-10O
Contig/Assembly ProteinGBP6guanylate-binding protein 6 [Bos taurus]. 65.51e-10O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinATL3PREDICTED: atlastin-3 [Sus scrofa]. 6340.0O
Contig/Assembly ProteinLOC100521264PREDICTED: atlastin-2-like, partial [Sus scrofa]. 484e-137O
Contig/Assembly ProteinATL1PREDICTED: atlastin-1, partial [Sus scrofa]. 379e-105O
Contig/Assembly ProteinLOC100623266PREDICTED: atlastin-1-like [Sus scrofa]. 2124e-55O
Contig/Assembly ProteinLOC100523668PREDICTED: interferon-induced guanylate-binding protein 2-like isoform 2 [Sus scrofa]. 64.71e-10O
Contig/Assembly ProteinGBP2interferon-induced guanylate-binding protein 2 [Sus scrofa]. 64.31e-10O
Contig/Assembly ProteinGBP1interferon-induced guanylate-binding protein 1 [Sus scrofa]. 59.73e-09O
Contig/Assembly ProteinGBP6PREDICTED: guanylate-binding protein 6 [Sus scrofa]. 572e-08O


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010099H08AMP01_0099_H08.bBW962432 
CBLT10006G07CBLT1_0006_G07.bHX212217 
CBLT10067D07CBLT1_0067_D07.bHX216474 
CBLT10070C02CBLT1_0070_C02.bHX216714 
CLNT10059F02CLNT1_0059_F02.bFS661725 
HTMT10061H04HTMT1_0061_H04.b  
MLTL10020G06MLTL1_0020_G06.bFS680164 
SKNB10080E05SKNB1_0080_E05.bDB804863 AK349886

  

SNPs: 4      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
451G400.500WSGTG/V
T400.500GTT/V
559A400.571WSCCA/P
C300.429CCC/P
781C300.429WSAAC/N
T400.571AAT/N
787C300.429WSTCC/S
T400.571TCT/S


Alignment:      TOP

20110601C-003950 : ....................AGCGCGTCGGGCGGTGGCGGGATTCGGCCGCGTGTGCTCT
---------+---------+---------+---------+---------+---------+ 40
SKNB1_0080_E05.b : nnnnttggcgttggctacggAGCGCGTCGGGCGGTGGCGGGATTCGGCCGCGTGTGCTCT
CLNT1_0059_F02.b :
AMP01_0099_H08.b :
MLTL1_0020_G06.b :
CBLT1_0067_D07.b :
CBLT1_0070_C02.b :
HTMT1_0061_H04.b :
CBLT1_0006_G07.b :
20110601C-003950 : CCAGCCCCAGCTCGCCCTGCGCTCGCGGCTCTTTGGGCGGCCGGTCCAGTCCTGCCAGCC
---------+---------+---------+---------+---------+---------+ 100
SKNB1_0080_E05.b : CCAGCCCCAGCTCGCCCTGCGCTCGCGGCTCTTTGGGCGGCCGGTCCAGTCCTGCCAGCC
CLNT1_0059_F02.b :
AMP01_0099_H08.b : gggctaactacnxxxxxxxxx
MLTL1_0020_G06.b : nnnnnnnnnnnnnnnnnnnn
CBLT1_0067_D07.b :
CBLT1_0070_C02.b :
HTMT1_0061_H04.b :
CBLT1_0006_G07.b :
20110601C-003950 : AGCGTTGTGGTTGCTCTCTCGCGGCTCTGCGCGCCCCTCCTTCCCCCCAGTTTCCTCCAG
---------+---------+---------+---------+---------+---------+ 160
SKNB1_0080_E05.b : AGCGTTGTGGTTGCTCTCTCGCGGCTCTGCGCGCCCCTCCTTCCCCCCAGTTTCCTCCAG
CLNT1_0059_F02.b : ntttccgt
AMP01_0099_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLTL1_0020_G06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CBLT1_0067_D07.b :
CBLT1_0070_C02.b :
HTMT1_0061_H04.b :
CBLT1_0006_G07.b :
20110601C-003950 : AGGCCAGGCCCCGCCCGTTTCCCGTCTCCCGGGCCTGGTTCGTTCCCGCCCCAGCCCGCC
---------+---------+---------+---------+---------+---------+ 220
SKNB1_0080_E05.b : AGGCCAGGCCCCGCCCGTTTCCCGTCTCCCGGGCCTGGTTCGTTCCCGCCCCAGCCCGCC
CLNT1_0059_F02.b : ttgctgacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0099_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLTL1_0020_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CBLT1_0067_D07.b : tttttttnggacggtacacgc
CBLT1_0070_C02.b : nttggcaggtagaggcc
HTMT1_0061_H04.b : ttttcgagagtacgagg
CBLT1_0006_G07.b :
20110601C-003950 : CCTCTCTGTGCCCCTGCTGCCTCTGCTGGAGGCGGAGGCTCCATGTTGTCCCCTCAGCGA
---------+---------+---------+---------+---------+---------+ 280
SKNB1_0080_E05.b : CCTCTCTGTGCCCCTGCTGCCTCTGCTGGAGGCGGAGGCTCCATGTTGTCCCCTCAGCGA
CLNT1_0059_F02.b : xxTCTCTGTGCCCCTGCTGCCTCTGCTGGAGGCGGAGGCTCCATGTTGTCCCCTCAGCGA
AMP01_0099_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxCTGGAGGCGGAGGCTCCATGTTGTCCCCTCAGCGA
MLTL1_0020_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGGCTCCATGTTGTCCCCTCAGCGA
CBLT1_0067_D07.b : cgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggtTGTTGTCCCCTCAGCGA
CBLT1_0070_C02.b : gtagtatttatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggtTGTTGTCCCCTCAGCGA
HTMT1_0061_H04.b : ccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgGTTGTCCCCTTAGCGA
CBLT1_0006_G07.b :
20110601C-003950 : GCGGTAGCGGCTGCATCGCGAGGAGCAGGTGATGCCATGGAGGGTGGAAAGCCTGGTCCC
---------+---------+---------+---------+---------+---------+ 340
SKNB1_0080_E05.b : GCGGTAGCGGCTGCATCGCGAGGAGCAGGTGATGCCATGGAGGGTGGAAAGCCTGGTCCC
CLNT1_0059_F02.b : GCGGTAGCGGCTGCATCGCGAGGAGCAGGTGATGCCATGGAGGGTGGAAAGCCTGGTCCC
AMP01_0099_H08.b : GCGGTAGCGGCTGCATCGCGAGGAGCAGGTGATGCCATGGAGGGTGGAAAGCCTGGTCCC
MLTL1_0020_G06.b : GCGGTAGCGGCTGCATCGCGAGGAGCAGGTGATGCCATGGAGGGTGGAAAGCCTGGTCCC
CBLT1_0067_D07.b : GCGGTAGCGGCTGCATCGCGAGGAGCAGGTGATGCCATGGAGGGTGGAAAGCCTGGTCCC
CBLT1_0070_C02.b : GCGGTAGCGGCTGCATCGCGAGGAGCAGGTGATGCCATGGAGGGTGGAAAGCCTGGTCCC
HTMT1_0061_H04.b : GCGGTAGCGGCTGCATCGCGAGGAGCAGGTGATGCCATGGAGGGTGGAAAGCCTGGTCCC
CBLT1_0006_G07.b : tttttccag
20110601C-003950 : GTGCAGGTTGTTATGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTG
---------+---------+---------+---------+---------+---------+ 400
SKNB1_0080_E05.b : GTGCAGGTTGTTATGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTG
CLNT1_0059_F02.b : GTGCAGGTTGTTATGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTG
AMP01_0099_H08.b : GTGCAAGTTGTTATGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTG
MLTL1_0020_G06.b : GTGCAGGTTGTTATGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTG
CBLT1_0067_D07.b : GTGCAGGTTGTTATGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTG
CBLT1_0070_C02.b : GTGCAGGTTGTTATGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTG
HTMT1_0061_H04.b : GTGCAGGTTGTTATGGTTCAGAAAGACCAACATTCCTTTGAGCTAGAAGAGAAAGCCTTG
CBLT1_0006_G07.b : gtacacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAGCCTTG
20110601C-003950 : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTGTCGGTGGCT
---------+---------+---------+---------+---------+---------+ 460
SKNB1_0080_E05.b : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTGTCGGTGGCT
CLNT1_0059_F02.b : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTGTCGGTGGCT
AMP01_0099_H08.b : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTGTCGGTGGCT
MLTL1_0020_G06.b : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTGTCGGTGGCT
CBLT1_0067_D07.b : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTTTCGGTGGCT
CBLT1_0070_C02.b : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTTTCGGTGGCT
HTMT1_0061_H04.b : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTTTCGGTGGCT
CBLT1_0006_G07.b : GCCAGCATCCTCTTACAGGACCACATCCGAGACCTTGATGTGGTGGTGGTTTCGGTGGCT
20110601C-003950 : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
---------+---------+---------+---------+---------+---------+ 520
SKNB1_0080_E05.b : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
CLNT1_0059_F02.b : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
AMP01_0099_H08.b : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
MLTL1_0020_G06.b : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
CBLT1_0067_D07.b : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
CBLT1_0070_C02.b : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
HTMT1_0061_H04.b : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
CBLT1_0006_G07.b : GGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTGCGATACTTATATTTC
20110601C-003950 : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCCGAAGAACCGTTAACAGGGTTT
---------+---------+---------+---------+---------+---------+ 580
SKNB1_0080_E05.b : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCAGAAGAACCGTTAACAGGGTTT
CLNT1_0059_F02.b : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCAGAAGAACCGTTAACAGGGTTT
AMP01_0099_H08.b : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCAGAAGAACCGTTAACAGGGTTT
MLTL1_0020_G06.b : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCAGAAGAACCGTTAACAGGGTTT
CBLT1_0067_D07.b : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCCGAAGAACCGTTAACAGGGTTT
CBLT1_0070_C02.b : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCCGAAGAACCGTTAACAGGGTTT
HTMT1_0061_H04.b : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCCGAAGAACCGTTAACAGGGTTT
CBLT1_0006_G07.b : CAGAAGGAAGGTGGCCATTCAAATTGGTTGGGTGACCCCGAAGAACCGTTAACAGGGTTT
20110601C-003950 : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
---------+---------+---------+---------+---------+---------+ 640
SKNB1_0080_E05.b : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
CLNT1_0059_F02.b : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
AMP01_0099_H08.b : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
MLTL1_0020_G06.b : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
CBLT1_0067_D07.b : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
CBLT1_0070_C02.b : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
HTMT1_0061_H04.b : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
CBLT1_0006_G07.b : TCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAATGAAGTGTTC
20110601C-003950 : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
---------+---------+---------+---------+---------+---------+ 700
SKNB1_0080_E05.b : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
CLNT1_0059_F02.b : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
AMP01_0099_H08.b : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
MLTL1_0020_G06.b : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
CBLT1_0067_D07.b : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
CBLT1_0070_C02.b : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
HTMT1_0061_H04.b : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
CBLT1_0006_G07.b : ACTGTGGAGAAGCCAGGCGGGAAGAAGGTTGCAGTTGTTCTGATGGACACCCAGGGTGCA
20110601C-003950 : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
---------+---------+---------+---------+---------+---------+ 760
SKNB1_0080_E05.b : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
CLNT1_0059_F02.b : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
AMP01_0099_H08.b : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
MLTL1_0020_G06.b : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
CBLT1_0067_D07.b : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
CBLT1_0070_C02.b : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
HTMT1_0061_H04.b : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
CBLT1_0006_G07.b : TTTGACAGCCAGTCCACTGTGAAAGACTGTGCTACCATCTTTGCTCTAAGCACCATGACT
20110601C-003950 : AGTTCTGTTCAGATTTATAATTTGTCTCAGAACATTCAGGAAGATGATCTTCAACAGCTA
---------+---------+---------+---------+---------+---------+ 820
SKNB1_0080_E05.b : AGTTCTGTTCAGATTTATAACTTGTCCCAGAACATTCAGGAAGATGATCTTCAACAGCTA
CLNT1_0059_F02.b : AGTTCTGTTCAGATTTATAACTTGTCCCAGAACATTCAGGAAGATGATCTTCAACAGCTA
AMP01_0099_H08.b : AGTTCTGTTCAGATTTATAACTTGTCCCAGAACATTCAGGAAGATGATCTTCAACAGCTA
MLTL1_0020_G06.b : AGTTCTGTTCAGATTTATAACTTGTCCCAGAACATTCAGGAAGATGATCTTCAACAGCTA
CBLT1_0067_D07.b : AGTTCTGTTCAGATTTATAATTTGTCTCAGAACATTCAGGAAGATGATCTTCAACAGCTA
CBLT1_0070_C02.b : AGTTCTGTTCAGATTTATAATTTGTCTCAGAACATTCAGGAAGATGATCTTCAACAGCTA
HTMT1_0061_H04.b : AGTTCTGTTCAGATTTATAATTTGTCTCAGAACATTCAGGAAGATGATCTTCAACAGCTA
CBLT1_0006_G07.b : AGTTCTGTTCAGATTTATAATTTGTCTCAGAACATTCAGGAAGATGATCTTCAACAGCTA
20110601C-003950 : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
---------+---------+---------+---------+---------+---------+ 880
SKNB1_0080_E05.b : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
CLNT1_0059_F02.b : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
AMP01_0099_H08.b : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
MLTL1_0020_G06.b : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
CBLT1_0067_D07.b : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
CBLT1_0070_C02.b : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
HTMT1_0061_H04.b : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
CBLT1_0006_G07.b : CAGCTCTTCACAGAATATGGTCGTCTAGCGATGGATGAAATTTTCCAAAAGCCCTTCCAG
20110601C-003950 : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAA
---------+---------+---------+---------+---------+---------+ 940
SKNB1_0080_E05.b : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAAATACACTATGGACTACAA
CLNT1_0059_F02.b : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAA
AMP01_0099_H08.b : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAA
MLTL1_0020_G06.b : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAA
CBLT1_0067_D07.b : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAA
CBLT1_0070_C02.b : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAA
HTMT1_0061_H04.b : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAA
CBLT1_0006_G07.b : ACACTGATGTTTTTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAA
20110601C-003950 : GGAGGAATGTCATTTTTGGAGAAGCGTCTACAG****GTGAAAGAACATCAACATGAAGA
---------+---------+---------+---------+---------+---------+ 996
SKNB1_0080_E05.b : GGAGGAATGTCATTTTTGGAGAAGCGTCTACCGG****TGAAAGAACATCAACATGAgaa
CLNT1_0059_F02.b : GGAGGAATGTCATTTTTGGAGAAGCGTCTACAGGCAGGTGAAAGAAACATCACATGAAGA
AMP01_0099_H08.b : GGAGGAATGTCATTTTTTGAGAAGCGTCTACAG****GTGAAAGAACATCAACATGAAGA
MLTL1_0020_G06.b : GGAGGGATGTCATTTTTGGAGA*GCGTCTACAG****GTGAAAGAACATCAACATGAAGA
CBLT1_0067_D07.b : GGAGGAATGTCATTTTTGGAGAAGCGTCTACAG****GTGAAAGAACATCAACATGAAGA
CBLT1_0070_C02.b : GGAGGAATGTCATTTTTGGAGAAGCGTCTACAG****GTGAAAGAACACTCACATGAAGA
HTMT1_0061_H04.b : GGAGGAATGTCATTTTTGGAGAAGCGTCTACAG****GTGAAAGAACATCAACATGAAGA
CBLT1_0006_G07.b : GGAGGAATGTCATTTTTGGAGAAGCGTCTACAG****GTGAAAGAACATCAACATGAAGA
20110601C-003950 : AATTCAGAACGTCCGAAATCACATTCACTCCTGTTTCTCCAGTGTCACCTGTTTCCTCCT
---------+---------+---------+---------+---------+---------+ 1056
SKNB1_0080_E05.b : attcagaacgtccgaatcacatccctcctggttctccgtgtccccgggttcctcctccca
CLNT1_0059_F02.b : AATTCAGAACGTCCGAAATCACATTCACTCCTGTTTCTCCAGTGTCACCTGTTTCCTCCT
AMP01_0099_H08.b : AATTCAGAACGTCCGAAATCACATTCACTCCTGTTTCCTCCGTGTCACCTGTTTCCTTCT
MLTL1_0020_G06.b : AATTCAGAACGTCCGAA*TCACATTCACTCTTGTTTCTCCgtgtcactggttcctcctcc
CBLT1_0067_D07.b : AATTCAAAACGTCCGAAATCACATTCACTCCTGTTTCTCCAGTGTCACTTGTTTCCTCCT
CBLT1_0070_C02.b : AATTCAGAACGTCCGAAATCACATTCACTCCTGTTTCTCCAGTGTCACCTGTTTCCTCCT
HTMT1_0061_H04.b : AATTCAGAACGTCCGAAATCACATTCACTCCTGTTTCTCCAGTGTCACCGGTTTCCTCCT
CBLT1_0006_G07.b : AATTCAGAACGTCCGAAATCACATTCACTCCTGTTTCTCCAGTGTCACCTGTTTCCTCCT
20110601C-003950 : CCCACATCCAGGAC*TCCGGGTGGCCACAAGCCCTGACTTTGACGGCAAATTGAAAGATA
---------+---------+---------+---------+---------+---------+ 1115
SKNB1_0080_E05.b : atccgggaatccgggtgggcccaaccctgacttgaccggcattgaagaatatgatagtga
CLNT1_0059_F02.b : CCCACATCCCGGAC*TCCGGGTGGCCACAAGCCCTGACTTTGATGGCAAATTGAAAGATA
AMP01_0099_H08.b : TCCACATCCAGGACCTCCGGGTGGCCCCCAGCCCTGACTTTGACGGCAAATTtgaaagat
MLTL1_0020_G06.b : acatcaggactccgggtggcacaaccctgactttgatggcaaattaaagaattgatagtg
CBLT1_0067_D07.b : CCCACAATCAGGGACTCCGGGTGGCCACAAGCCCTGACTTTGACCGCAAATTGAAaaatt
CBLT1_0070_C02.b : CC*ACATCCAGGAC*TCCGGGTGGCCACAAGCCCTGACTTTGACGGCAAATTGAAAGATA
HTMT1_0061_H04.b : CCCACATCCCGGAC*TCCGGGTGGCCACAgccctgactttgaccgcaattgaaagatatt
CBLT1_0006_G07.b : CCCACATCCAGGAC*TCCGGGTGGCCACAAGCCCTGACTTTGACGGCAAATTGAAAGATA
20110601C-003950 : TTGATAGTGAATTCAAAGAGCAGTTACAGATACTGATACCATATGTATTAAACCCAGCTA
---------+---------+---------+---------+---------+---------+ 1175
SKNB1_0080_E05.b : ttccagagcagtacgaaacgaaccccatggtttaacccgcaaattatggaaagggaatca
CLNT1_0059_F02.b : TTGATAGTGAATTCAAAagagcattacagatactgatacccttatgtattaaacccagct
AMP01_0099_H08.b : attgattgtgaattccaagagcagttacaaaatccggataacctattgtattaaaccccg
MLTL1_0020_G06.b : aattcaagaacagttacgatactgatacctatgtataaacccagctacttatggaaagga
CBLT1_0067_D07.b : ttgatattgatttcaaagagcagttaccgatactgatcccatttgtattaaaccccgcta
CBLT1_0070_C02.b : TTGATAGTGAATTCAAAGAGCATTTAC*GATACTGATACCTTATGTTTTAAA*CCACCTA
HTMT1_0061_H04.b : gatagtgattcaaagagcagttcagatactgataccctttgtattaaaccggctaactta
CBLT1_0006_G07.b : TTGATAGTGAATTCAAAGAGCAGTTACAGATACTGATACCATATGTATTAAACCCAGCTA
20110601C-003950 : ACTTAATGGAAAAGGAAATCAATGGCTCAAAAGTCACCTGTCGGGGGCTACTGGAGTATT
---------+---------+---------+---------+---------+---------+ 1235
SKNB1_0080_E05.b : ggcccaaaataccgtgggggcgcgcggaattttaggcaccttaaatcccccgggaaaaat
CLNT1_0059_F02.b : aacttaatgggaaaaggaatcaatggctcaaaagtcacctgtcgggggctactgggatat
AMP01_0099_H08.b : ctaaccttaaggaaaaggggaaatcaagggctccaaattccccggtccgggggccaccgg
MLTL1_0020_G06.b : atcatggctcaagtccctggcggggctcgggatatttaggcaactttaacttccggaaaa
CBLT1_0067_D07.b : acctaatggaaaagggaaatcatggtccaaaaatcacctgtcgggggcttctggagtatt
CBLT1_0070_C02.b : ACTTAAGGGAAAAGGAAATCAATGGCTCAAAAGTCACCTGGTGGGGGgctactggagtat
HTMT1_0061_H04.b : tgaaaaaggaaatcaatggctcaaaagtcccctgtcgggggctactggagtattttaggg
CBLT1_0006_G07.b : ACTTAATGGAAAAGGAAATCAATGGCTCAAAAGTCACCTGTCGGGGGCTACTGGAGTATT
20110601C-003950 : TTAGGCATACATTAAAATCTACCAGGGAGAGATCTGCCTCACCCCCAGTCATGCTTCAAG
---------+---------+---------+---------+---------+---------+ 1295
SKNB1_0080_E05.b : gccccc
CLNT1_0059_F02.b : tttaaggctacctaaaatctcccaaggaaaaatctggcctaccccaattcctgctttggg
AMP01_0099_H08.b : gaatattttaaagggataaattaaaaatctaccaagggaaaaaaatttgccccaaccccc
MLTL1_0020_G06.b : attgcctcccccatcatgtttaggccgggaaccaaattggaccgcgccctgccggaattt
CBLT1_0067_D07.b : taagggctacctttaaatctcccggggaaaaattggccccacccaattcatggttaggcc
CBLT1_0070_C02.b : tttaagggatactttaaaatcctcccagggaaaaatactgctcacccccagttcctgctt
HTMT1_0061_H04.b : ctacattaaaacctcccaaggagaaaatcggcctcacccaaggccatgctttaggccctt
CBLT1_0006_G07.b : TTAGGCATACATTAAAATCTACCAGGGAGAGATCTGCCTCACCCCCAGTCATGCTTCAAG
20110601C-003950 : CCACTGCTGA..................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b : ccctggtgaaaccacaatttggcactggcacccttgccagggaatttttaaacaactgga
AMP01_0099_H08.b : agtcccttgtcttccgggcccctgccttaaaacccaacaattttgggccccttgcccgcc
MLTL1_0020_G06.b : tacccagggaaagggggggagaaaaccctttctccaactctggggaacgggatttaacgg
CBLT1_0067_D07.b : ctgggtaaaccaaaatttggcaccggcccccccgccagggatttttttcaaacctggaaa
CBLT1_0070_C02.b : tcggggcctgcttaagacaaaaaattggcacctgccacccccgtccaggacttttttaaa
HTMT1_0061_H04.b : gctgaagcaaacaattgggcagctgcacctcctgcaaggaatttttacaacaacatggaa
CBLT1_0006_G07.b : CCACTGCTGAagccacaatttggcagctgcagcctctgccaaggacatttatacaacacc
20110601C-003950 : ............................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b : aaagatggtggggagaaacaaccattttgtccccaacctctggggggaaaccgtggaatc
AMP01_0099_H08.b : cccctccccagggaaaatttttttttacaaaaaacccggggagaaaaaaggggggggggg
MLTL1_0020_G06.b : gcggacttaaaacaaaaggggaggtttccctctcgcggggggaattaacttaattcttca
CBLT1_0067_D07.b : agggggggggggaaaaaaccatttgtccccacaacccgtgaggaaacccgtggaattaaa
CBLT1_0070_C02.b : acacctggaagaggtgggtgggggaaacaaactcttttgtctcaaattcctggggggaaa
HTMT1_0061_H04.b : aagggggggggggaaaaaacccttgtgttcccaaatcccgggggaaagcctgtgaattca
CBLT1_0006_G07.b : tggaagaggtgtggtggggagaacaacctaattttctccaaaatcctggagggaaacacg
20110601C-003950 : ............................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b : aaaaggggccttggcacctttaaaaccaaaaaatgggggggaggatttcccccttcaccc
AMP01_0099_H08.b : ggggggggaaaaaaaaaaaaccccttttttttttttttcctccctccacaaaccat
MLTL1_0020_G06.b : ggggatttcccccccggttccggggtttcccccctctccggggtcctggtttctcgcnnt
CBLT1_0067_D07.b : ccggggtctgggacttttaaaaaacaaaaagggggggagagatttcccccctcccaccgg
CBLT1_0070_C02.b : cctgggaatttcacccgtgggtttggacctttaaaaaaacacaaaagggggggcagatct
HTMT1_0061_H04.b : aaaggggcttgggccctttaaaaaacccataaaaggggggaaggatttaccccctttccc
CBLT1_0006_G07.b : gtaattcaaacactggctctggacccttttagaaaaccaaaaaaaggggggcaagaattt
20110601C-003950 : ............................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b : gggggggggaggaaccgcctctccacatt
AMP01_0099_H08.b :
MLTL1_0020_G06.b : tnnngtgtgtttgnnnccctcgggggcaacccccttcccccttcnnnnnnnnnnnnnnnn
CBLT1_0067_D07.b : ggggggggagaaaatgaatctttaaaaatttctggcacccgggagaaaaattttctcctc
CBLT1_0070_C02.b : tatctctcttccacgggagtggggggggatccgaaaccctaaaattcgtgcctccacgga
HTMT1_0061_H04.b : gcggaggtgggagagaaccagaaatctgaaaaattctggaaacagagtgggagaattctc
CBLT1_0006_G07.b : accctccttaccccaggactggagaaggaatccggaacttaaaagaatttggaaccaaag
20110601C-003950 : ............................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b :
AMP01_0099_H08.b :
MLTL1_0020_G06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnn
CBLT1_0067_D07.b : ttgcgacgcggggtctttgggaggtgttttattacccccccccgcggttctcttggtggg
CBLT1_0070_C02.b : ggaaaatcttcatctttgggaaccgcgactctttcaggctgggtgtaaaacctcggcgag
HTMT1_0061_H04.b : tccccctcggaaccg
CBLT1_0006_G07.b : ggagaaaaatttttgaaacttcgaacgggaggttttttcgggattggggttgtaaatact
20110601C-003950 : ............................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b :
AMP01_0099_H08.b :
MLTL1_0020_G06.b :
CBLT1_0067_D07.b : gcgcccctcttaggggggggttatatacccccgggagaaaaaatgttaagat
CBLT1_0070_C02.b : gtactatatcatgagtgccn
HTMT1_0061_H04.b :
CBLT1_0006_G07.b : ccggccacgggttcccccccttagggggcgccacttcacaccgggtggggcgctataacc
20110601C-003950 : ............................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b :
AMP01_0099_H08.b :
MLTL1_0020_G06.b :
CBLT1_0067_D07.b :
CBLT1_0070_C02.b :
HTMT1_0061_H04.b :
CBLT1_0006_G07.b : cgcccccggggacaaaggaccgtgaattccggagggggccatatttgtggatttgttaga
20110601C-003950 : ............................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b :
AMP01_0099_H08.b :
MLTL1_0020_G06.b :
CBLT1_0067_D07.b :
CBLT1_0070_C02.b :
HTMT1_0061_H04.b :
CBLT1_0006_G07.b : ggccctcacaaatttctcggcgggggagagtggtggaacccaaaaaacatctctaaaatt
20110601C-003950 : ............................................................
---------+---------+---------+---------+---------+---------+ 1305
SKNB1_0080_E05.b :
CLNT1_0059_F02.b :
AMP01_0099_H08.b :
MLTL1_0020_G06.b :
CBLT1_0067_D07.b :
CBLT1_0070_C02.b :
HTMT1_0061_H04.b :
CBLT1_0006_G07.b : aaacacccccttttgttttcggg