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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-003953

Length: 991

Sequence:  [FASTA format sequence]
TTCCTCTTGC CTCCCGCTCT CCCTAGAGGT GGATACCCAG TAGTCCAGCG GCGTAGGAGC
CACCTTCCTT CCTGGTGGCT GCAACCCCTC GATCTCCCGC CGAAGTCTCC AGGCCTGAGA
GCCTGGCCGA ACATGGCCTT GGCTACTGTG GCAGCAGCAA GACTGGGCCT CAGCCGGGCT
CCTTCGCTCC TTCGGCGTGG CTACCAGACG GAGAGGGGTG TCTACGGCTA CCGGCCGAGG
AAGCGTGAGA GCCGGGAGCC CCAGGGCGGC CTGGCGCGTC CCCCAGTGGA TCATGGCCTT
GCCAGGTTGG TAACTGTATA TTGCGAGCAC GGTCATAAAG CGGCCAAAAT CAACCCCCTC
TTCACTGGCC AAGCGCTGCA GGAGAATGTG CCTGAAATCC AAGCCCTCGT GCAGACTTTG
CAGGGACCCT TCAATACTGC AGGCTTATTG AACATGGGGA AGGAGGAGGC CTCTCTCGAG
GAAGTCGTGG CCTATCTCAA CCAGATCTAC TGTGGGCAGA TTTCCATTGA AACGTCCCAG
CTTCAGAGCC AGGAGGAGAA GGACTGGTTT GCCAAGAGGT TTGAGGAACT GAAAAAGGAG
GCATTTACCA CAGAAGAGCG AAAACATTTG TCGAAACTCA TGCTAGAATC TCAGGCCTTT
GACCACTTTT TGGCCACCAA GTTTGCCACG GTGAAGCGAT ACGGAGGCGA AGGTGCTGAA
AGCATGATGG GCTTTTTCTA CGAGCTGCTG AGAACGGCTG CCTACAGCGG GGTCACCGAT
GTCATTATTG GGATGCCCCA TAGAGGGAGG CTGAACCTAC TGACAGGCCT TCTGCAGTTC
CCTCCAGAGT TGATGTTCCG TAAAATGCGA GGCTTAAGTG AATTTCCGGA AACGTCTCCC
ACGTTGGCGA TGTCCTGTCT CACCTGACCT CCTCGGTTGA CCTGNACTTC GGGGCACACC
ATCCCCCTCA CGTGACCATG CTCCCTAACC C

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

---

BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		DHTKD1	probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial precursor [Homo sapiens].	459	e-141	O
		OGDHL	2-oxoglutarate dehydrogenase-like, mitochondrial isoform a [Homo sapiens].	91.3	1e-18
		OGDH	2-oxoglutarate dehydrogenase, mitochondrial isoform 3 precursor [Homo sapiens].	89.4	5e-18
		OGDHL	2-oxoglutarate dehydrogenase-like, mitochondrial isoform b [Homo sapiens].	88.6	8e-18	O
		OGDH	2-oxoglutarate dehydrogenase, mitochondrial isoform 1 precursor [Homo sapiens].	87.4	2e-17
		OGDH	2-oxoglutarate dehydrogenase, mitochondrial isoform 2 precursor [Homo sapiens].	87.4	2e-17
		OGDHL	2-oxoglutarate dehydrogenase-like, mitochondrial isoform c [Homo sapiens].	73.6	3e-13	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Dhtkd1	probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial precursor [Mus musculus].	424	e-130	O
		LOC100505258	PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like [Mus musculus].	424	e-130	O
		Ogdhl	2-oxoglutarate dehydrogenase-like, mitochondrial [Mus musculus].	87.8	1e-17
		Ogdh	2-oxoglutarate dehydrogenase, mitochondrial precursor [Mus musculus].	86.7	3e-17

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC478008	PREDICTED: similar to dehydrogenase E1 and transketolase domain containing protein 1 [Canis familiaris].	462	e-142
		LOC477748	PREDICTED: similar to oxoglutarate dehydrogenase-like [Canis familiaris].	91.7	1e-18
		LOC475499	PREDICTED: similar to oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) isoform 1 precursor [Canis familiaris].	84.7	1e-16

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		DHTKD1	PREDICTED: dehydrogenase E1 and transketolase domain containing 1-like [Bos taurus].	478	e-147	O
		DHTKD1	probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial [Bos taurus].	478	e-147	O
		OGDHL	2-oxoglutarate dehydrogenase-like, mitochondrial [Bos taurus].	91.7	9e-19
		OGDHL	PREDICTED: oxoglutarate dehydrogenase-like isoform 1 [Bos taurus].	91.7	9e-19
		OGDHL	PREDICTED: oxoglutarate dehydrogenase-like isoform 2 [Bos taurus].	89	6e-18	O
		OGDHL	PREDICTED: oxoglutarate dehydrogenase-like [Bos taurus].	89	6e-18	O
		OGDH	2-oxoglutarate dehydrogenase, mitochondrial precursor [Bos taurus].	87.8	1e-17

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		LOC100513372	PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like, partial [Sus scrofa].	407	e-126
		LOC100521870	PREDICTED: LOW QUALITY PROTEIN: 2-oxoglutarate dehydrogenase-like, mitochondrial-like [Sus scrofa].	91.7	6e-19

Alignment:      TOP

20110601C-003953 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
CLNT1_0063_A10.b :        nntttccgtttgctgtcgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0110_A09.b :       ngccttttnnnnnnnccgtcagcgnacgagtgxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0045_H09.b :               ngtactccgttctgcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0090_D03.b : ncgctttttnnngncngggtctgcgttcgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PST01_0029_A02.b :                                                             
BFLT1_0088_G12.b :                                   ggaatccgttagctgtcgxxxxxxxx


20110601C-003953 : ....................TTCCTCTTGCCTCCCG*CTCTCCCTAGAGGTGGATACCCA
                   ---------+---------+---------+---------+---------+---------+ 39
CLNT1_0063_A10.b : xxxxxxxxxxxxxxxxxxxxTTCCTCTTGCCTCCCG*CTCTCCCTAGAGGTGGATACCCA
BFLT1_0110_A09.b : xxxxxxxxxxxxxxxxxxxxxxxCTCTTGCCTCCCGCCTCTCCCTAGAGGTGGATACCCA
BFLT1_0045_H09.b : xxxxxxxxxxxxxxxxxxxxxxxCTCTTGCCTCCCGCCTCTCCCTAGAGGTGGATACCCA
CLNT1_0090_D03.b : xxxxxxxxxxxxxxxxxxxxxxxCTCTTGCCTCCCG*CTCTCCCTAGAGGTGGATACCCA
PST01_0029_A02.b :  nttttactgcggtggctctggatttcctgcctccgcCTCTCCCTAGAGGTGGATACCCA
BFLT1_0088_G12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgtGGTGGATACCCA


20110601C-003953 : GTAGTCCAGCGGCGTAGGAGCCACCTTCCTTCCTGGTGGCTGCAACCCCTCGATCTCCCG
                   ---------+---------+---------+---------+---------+---------+ 99
CLNT1_0063_A10.b : GTAGTCCAGCGGCGTAGGAGCCACCTTCCTTCCTGGTGGCTGTAACCCCTCGATCTCCCG
BFLT1_0110_A09.b : GTAGTCCAGCGGCGTAGGAGCCACCTTCCTTCCTGGTGGCTGCAACCCCTCGATCTCCCG
BFLT1_0045_H09.b : GTAGTCCAGCGGCGTAGGAGCCACCTTCCTTCCTGGTGGCTGCAACCCCTCGATCTCCCG
CLNT1_0090_D03.b : GTAGTCCAGCGGCGTAGGAGCCACCTTCCTTCCTGGTGGCTGTAACCCCTCGATCTCCCG
PST01_0029_A02.b : GTAGTCCAGCGCCTTAGGAGCCACCTTCCTTCCTGGTGGCTGCAACCCCTCGATCTCCCG
BFLT1_0088_G12.b : GTAGTCCAGCGGCGTAGGAGCCACCTTCCTTCCTGGTGGCTGCAACCCCTCGATCTCCCG


20110601C-003953 : CCGAAGTCTCCAGGCCTGAGAGCCTGGCCGAACATGGCCTTGGCTACTGTGGCAGCAGCA
                   ---------+---------+---------+---------+---------+---------+ 159
CLNT1_0063_A10.b : CCGAAGTCTCCAGGCCTGAGAGCCTGGCCGAACATGGCCTTGGCTACTGTGGCAGCAGCA
BFLT1_0110_A09.b : CCGAAGTCTCCAGGCCTGAGAGCCTGGCCGAACATGGCCTTGGCTATTGTGGCAGCAGCA
BFLT1_0045_H09.b : CCGAAGTCTCCAGGCCTGAGAGCCTGGCCGAACATGGCCTTGGCTACTGTGGCAGCAGCA
CLNT1_0090_D03.b : CCGAAGTCTCCAGGCCTGAGAGCCTGGCCGAACATGGCCTTGGCTACTGTGGCAGCAGCA
PST01_0029_A02.b : CCGAAGTCTCCAGGCCTGAGAGCCTGGCCGAACATGGCCTTGGCTACTGTGGCAGCAGCA
BFLT1_0088_G12.b : CCGAAGTCTCCAGGCCTGAGAGCCTGGCCGAACATGGCCTTGGCTACTGTGGCAGCAGCA


20110601C-003953 : AGACTGGGCCTCAGCCGGGCTCCTTCGCTCCTTCGGCGTGGCTACCAGACGGAGAGGGGT
                   ---------+---------+---------+---------+---------+---------+ 219
CLNT1_0063_A10.b : AGACTGGGCCTCAGCCGGGCTCCTTCGCTCCTTCGGCGTGGCTACCAGACGGAGAGGGGT
BFLT1_0110_A09.b : AGACTGGGCCTCAGCCGGGCTCCTTCGCTCCTTCGGCGTGGCTACCAGACGGAGAGGGGT
BFLT1_0045_H09.b : AGACTGGGCCTCAGCCGGGCTCCTTCGCTCCTTCGGCGTGGCTACCAGACGGAGAGGGGT
CLNT1_0090_D03.b : AGACTGGGCCTCAGCCGGGCTCCTTCGCTCCTTCGGCGTGGCTACCAGACGGAGAGGGGT
PST01_0029_A02.b : AGACTGGGCCTCAGCCGGGCTCCTTCGCTCCTCCGGCGTGGCTACCAGACGGAGAGGGGT
BFLT1_0088_G12.b : AGACTGGGCCTCAGCCGGGCTCCTTCGCTCCTTCGGCGTGGCTACCAGACGGAGAGGGGT


20110601C-003953 : GTCTACGGCTACCGGCCGAGGAAGCGTGAGAGCCGGGAGCCCCAGGGCGGCCTGGCGCGT
                   ---------+---------+---------+---------+---------+---------+ 279
CLNT1_0063_A10.b : GTCTACGGCTACCGGCCGAGGAAGCGTGAGAGCCGGGAGCCCCAGGGCGGCCTGGCGCGT
BFLT1_0110_A09.b : GTCTACGGCTACCGGCCGAGGAAGCGTGAGAGCCGGGAGCCCCAGGGCGGCCTGGCGCGT
BFLT1_0045_H09.b : GTCTACGGCTACCGGCCGAGGAAGCGTGAGAGCCGGGAGCCCCAGGGCGGCCTGGCGCGT
CLNT1_0090_D03.b : GTCTACGGCTACCGGCCGAGGAAGCGTGAGAGCCGGGAGCCCCAGGGCGGCCTGGCGCGT
PST01_0029_A02.b : GTCTACGGCTACCGGCCGAGGAAGCGTGAGAGCCCGGAGCCCCAGGGCGGCCTGGCGCGT
BFLT1_0088_G12.b : GTCTACGGCTACCGGCCGAGGAAGCGTGAGAGCCGGGAGCCCCAGGGCGGCCTGGCGCGT


20110601C-003953 : CCCCCAGTGGATCATGGCCTTGCCAGGTTGGTAACTGTATATTGCGAGCACGGTCATAAA
                   ---------+---------+---------+---------+---------+---------+ 339
CLNT1_0063_A10.b : CCCCCAGTGGATCATGGCCTTGCCAGGTTGGTAACTGTATATTGCGAGCACGGTCATAAA
BFLT1_0110_A09.b : CCCTCAGTGGATCATGGCCTTGCCAGGTTGGTAACTGTATATTGCGAGCACGGTCATAAA
BFLT1_0045_H09.b : CCCTCAGTGGATCATGGCCTTGCCAGGTTGGTAACTGTATATTGCGAGCACGGTCATAAA
CLNT1_0090_D03.b : CCCCCAGTGGATCATGGCCTTGCCAGGTTGGTAACTGTATATTGCGAGCACGGTCATAAA
PST01_0029_A02.b : CCCCCAGTGGATCATGGCCTTGCCAGGTTGGTAACTGTATATTGCGAGCACGGTCATAAA
BFLT1_0088_G12.b : CCCTCAGTGGATCATGGCCTTGCCAGGTTGGTAACTGTATATTGCGAGCACGGTCATAAA


20110601C-003953 : GCGGCCAAAATCAACCCCCTCTTCACTGGCCAAGCGCTGCAGGAGAATGTGCCTGAAATC
                   ---------+---------+---------+---------+---------+---------+ 399
CLNT1_0063_A10.b : GCGGCCAAAATCAACCCCCTCTTCACTGGCCAAGCGCTGCAGGAGAATGTGCCTGAAATC
BFLT1_0110_A09.b : GCGGCCAAAATCAACCCCCTCTTCACTTGCCAAGCGCTGCAGGAGAATGTGCCTGAAATC
BFLT1_0045_H09.b : GCGGCCAAAATCAACCCCCTCTTCACTTGCCAAGCGCTGCAGGAGAATGTGCCTGAAATC
CLNT1_0090_D03.b : GCGGCCAAAATCAACCCCCTCTTCACTGGCCAAGCGCTGCAGGAGAATGTGCCTGAAATC
PST01_0029_A02.b : GCGGCCAAAATCAACCCCCTCTTCACTGGCCAAGCGCTGCAGGAGAATGTGCCTGAAATC
BFLT1_0088_G12.b : GCGGCCAAAATCAACCCCCTCTTCACTGGCCAAGCGCTGCAGGAGAATGTGCCTGAAATC


20110601C-003953 : CAAGCCCTCGTGCAGACTTTGCAGGGACCCTTCAATACTGCAGGCTTATTGAACATGGGG
                   ---------+---------+---------+---------+---------+---------+ 459
CLNT1_0063_A10.b : CAAGCCCTCGTGCAGACTTTGCAGGGACCCTTCAATACTGCAGGCTTATTGAACATGGGG
BFLT1_0110_A09.b : CAAGCCCTCGTGCAGACTTTGCAGGGACCCTTCAATACTGCAGGCTTATTGAACATGGGG
BFLT1_0045_H09.b : CAAGCCCTCGTGCAGACTTTGCAGGGACCCTTCAATACTGCAGGCTTATTGAACATGGGG
CLNT1_0090_D03.b : CAAGCCCTCGTGCAGACTTTGCAGGGACCCTTCAATACTGCAGGCTTATTGAACATGGGG
PST01_0029_A02.b : CAAGCCCTCGTGCAGACTTTGCAGGGACCCTTCAATACTGCAGGCTTATTGAACATGGGG
BFLT1_0088_G12.b : CAGGCCCTCGTGCAGACTTTGCAGGGACCCTTCAATACTGCAGGCTTATTGAACATGGGG


20110601C-003953 : AAGGAGGAGGCCTCTCTCGAGGAAGTCGTGGCCTATCTCAACCAGATCTACTGTGGGCAG
                   ---------+---------+---------+---------+---------+---------+ 519
CLNT1_0063_A10.b : AAGGAGGAGGCCTCTCTCGAGGAAGTCGTGGCCTATCTCAACCAGATCTACTGTGGGCAG
BFLT1_0110_A09.b : AAGGAGGAGGCCTCTCTCGAGGAAGTCGTGGCCTATCTCAACCAGATCTACTGTGGGCAG
BFLT1_0045_H09.b : AAGGAGGAGGCCTCTCTCGAGGAAGTCGTGGCCTATCTCAACCAGATCTACTGTGGGCAG
CLNT1_0090_D03.b : AAGGAGGAGGCCTCTCTCGAGGAAGTCGTGGCCTATCTCAACCAGATCTACTGTGGGCAG
PST01_0029_A02.b : AAGGAGGAGGCCTCTCTCGAGGAAGTCGTGGCCTATCTCAACCAGATCTACTGTGGGCAG
BFLT1_0088_G12.b : AAGGAGGAGGCCTCTCTCGAGGAAGTCGTGGCCTATCTCAACCAGATCTACTGTGGGCAG


20110601C-003953 : ATTTCCATTGAAACGTCCCAGCTTCAGAGCCAGGAGGAGAAGGACTGGTTTGCCAAGAGG
                   ---------+---------+---------+---------+---------+---------+ 579
CLNT1_0063_A10.b : ATTTCCATTGAAACGTCCCAGCTTCAGAGCCAGGAGGAGAAGGACTGGTTTGCCAAGAGG
BFLT1_0110_A09.b : ATTTCCATTGAAACGTCCCAGCTTCAGAGCCAGGAGGAGAAGGACTGGTTTGCCAAGAGG
BFLT1_0045_H09.b : ATTTCCATTGAAACGTCCCAGCTTCAGAGCCAGGAGGAGAAGGACTGGTTTGCCAAGAGG
CLNT1_0090_D03.b : ATTTCCATTGAAACGTCCCAGCTTCAGAGCCAGGAGGAGAAGGACTGGTTTGCCAAGAGG
PST01_0029_A02.b : ATTTCCATTGAAACGTCCCAGCTTCAGAGCCAGGAGGAGAAGGACTGGTTTGCCAAGAGG
BFLT1_0088_G12.b : ATTTCCATTGAAACGTCCCAGCTTCAGAGCCAGGAGGAGAAGGACTGGTTTGCCAAGAGG


20110601C-003953 : TTTGAGGAACTGAAAAAGGAGGCATTTACCACAGAAGAGCGAAAACATTTGTCGAAACTC
                   ---------+---------+---------+---------+---------+---------+ 639
CLNT1_0063_A10.b : TTTGAGGAACTGAAAAAGGAGGCATTTACCACAGAAGAGCGAAAACATTTGTCGAAACTC
BFLT1_0110_A09.b : TTTGAGGAACTGAAAAAGGAGGCATTTACCACAGAAGAGCGAAAACATTTGTCGAAACTC
BFLT1_0045_H09.b : TTTGAGGAACTGAAAAAGGAGGCATTTACCACAGAAGAGCGAAAACATTTGTCGAAACTC
CLNT1_0090_D03.b : TTTGAGGAACTGAAAAAGGAGGCATTTACCACAGAAGAGCGAAAACATTTGTCGAAACTC
PST01_0029_A02.b : TTTGAGGAACTGAAAAAGGAGGCATTTACCACAGAAGAGCGAAAACATTTGTCGAAACTC
BFLT1_0088_G12.b : TTTGAGGAACTGAAAAAGGAGGCATTTACCACAGAAGAGCGAAAACATTTGTCGAAACTC


20110601C-003953 : ATGCTAGAATCTCAGGCCTTTGACCACTTTTTGGCCACCAAGTTTGCCACGGTGAAGCGA
                   ---------+---------+---------+---------+---------+---------+ 699
CLNT1_0063_A10.b : ATGCTAGAATCTCAGGCCTTTGACCACTTTTTGGCCACCAAGTTTGCCACGGTGAAGCGA
BFLT1_0110_A09.b : ATGCTAGAATCTCAGGCCTTTGACCACTTTTTGGCCACCAAGTTTGCCACGGTGAAGCGA
BFLT1_0045_H09.b : ATGCTAGAATCTCAGGCCTTTGACCACTTTTTGGCCACCAAGTTTGCCACGGTGAAGCGA
CLNT1_0090_D03.b : ATGCTAGAATCTCAGGCCTTTGACCACTTTTTGGCCACCAAGTTTGCCACGGTGAAGCGA
PST01_0029_A02.b : ATGCTAGAATCTCAGGCCTTTGACCACTTTTTGGCCACCAAGTTTGCCACGGTGAAGCGA
BFLT1_0088_G12.b : ATGCTAGAATCTCAGGCCTTTGACCACTTTTTGGCCACCAAGTTTGCCACGGTGAAGCGA


20110601C-003953 : TACGGAGGCGAAGGTGCTGAAAGCATGATGGGCTTTTTCTACGAGCTGCTGAGAACGGCT
                   ---------+---------+---------+---------+---------+---------+ 759
CLNT1_0063_A10.b : TACGGAGGCGAAGGTGCTGAAAGCATGATGGGCTTTTTCTACGAGCTGCTGAGAACGGCT
BFLT1_0110_A09.b : TACGGAGGCGAAGGTGCTNGAAGCATGATGGGCTTTTTCTACGAGCTGCTGAGAACGGCT
BFLT1_0045_H09.b : TACGGAGGCGAAAGTGCTGAAAGCATGATGGGCTTTTTCTACGAGCTGCTGAGAACGGCT
CLNT1_0090_D03.b : TACGGAGGCGAAGGTGCTGAAAGCATGATGGGCTTTTTCTACGAGCTGCTGAGAGCGGCT
PST01_0029_A02.b : TACGGAGGCGAAGGTGCTGAAAGCATGATGGGCTTTTTCTACGAGCTGCTGAGAACGGCT
BFLT1_0088_G12.b : TACGGAGGCGAAGGTGCTGAAAGCATGATGGGCTTTTTCTACGAGCTGCTGAGAACGGCT


20110601C-003953 : GCCTACAGCGGGGTCACCGATGTCATTATTGGGATGCCCCATAGAGGGAGGCTGAACCTA
                   ---------+---------+---------+---------+---------+---------+ 819
CLNT1_0063_A10.b : GCCTACAGCGGGGTCACCGATGTCATTATTGGGGATGCCCATAGAGGGAGGCTGAACCTA
BFLT1_0110_A09.b : GCCTACAGCGGGGTCACCGATGTCATTATTGGGATGCCCCATAGAGGGGAGCTGAACCTA
BFLT1_0045_H09.b : GCCTTCAGCGGGGTCACCGATGTCATTATTGGGATGCCCCATAAAGGGAGGCTGAACCTA
CLNT1_0090_D03.b : GCCTACAGCGGGGTCACCGATGTCATTATTGGGATGCCCCATAGAGGGGAGCTGACCCTA
PST01_0029_A02.b : GCCTACAGCGGGGTCACCGATGTCATTATTGGGATGCCCCATAGAGGGAGGCTGAACCTA
BFLT1_0088_G12.b : GCCTACAGCGGGGTCACCGATGTCATTATTGGGATGCCCCATAGAGGGAGGCTGAACCTA


20110601C-003953 : CTGACAGGCCTTCTGCAGTTCCCTCCAGAGTTGATGTTCCGTAAAATGCGAGGCTTAAGT
                   ---------+---------+---------+---------+---------+---------+ 879
CLNT1_0063_A10.b : CTGACAGGCCTTCTGCAGTTCCCNNTCAGAGTGATGTTCCCGTAAATGCGAGGCTTNAGT
BFLT1_0110_A09.b : CTGACAGGCCTTCTGCAGTTCCCTCAAAG*TTGATGTTCCGTAAAATGCcaagctttagt
BFLT1_0045_H09.b : CTGACAGGCCTTCTGCAGTTCCCTCCAGAGTTGATGTTCCGTAAAATGCGAGGCTTAAGT
CLNT1_0090_D03.b : CTGACAGGCCTTCTGCAGTTCCCTCCAGAGGTGATGTTCGGTAAAATGCGAGGCTTAAGT
PST01_0029_A02.b : CTGACAGGCCTTCTGCAGTTCCCTCCAGAGTTGATGTTCCGTAAAATGCGAGGCTTAAGT
BFLT1_0088_G12.b : CTGACAGGCCTTCTGCAGTTCCCTCCAGAAGTGATGTTCCGTAAAATGCGAGGCTTAAGT


20110601C-003953 : GAATTTCCGGAA*ACGTCTCCCACGTTGGCGATGTCCTGTCTCACCTGACCTCCTCGGTT
                   ---------+---------+---------+---------+---------+---------+ 938
CLNT1_0063_A10.b : GAATTTCCGGAA*ACGTCTC*CACGTTGGCGATGTCCTGTCTCACtgacctcctcggntg
BFLT1_0110_A09.b : gaatttccggaaacgtctccnacgttggcgatgtcctgtctcactgacctccctcggtga
BFLT1_0045_H09.b : GAATTTCCGGAA*Aacgtctcccacggtgggcaatgtcctgtctcacctgacctcctcgg
CLNT1_0090_D03.b : Gaatttccggaaacgtcntccacgttggcgatgtcctgtctcacctgacctcctcggttg
PST01_0029_A02.b : GAATTTCCGGAAAACGTCTCCCACGTTGGCGATGTCCTGTCTCACCTGACCTCCTCGGTT
BFLT1_0088_G12.b : Ggaatttcggaaaacgtctccaacgttgggcgatgtcctgtctcacctgaactccctcgg


20110601C-003953 : GACCTGNACTTCGGGGCACACCATCCCCCTCACGTGACCATGCTCCCTAACCC.......
                   ---------+---------+---------+---------+---------+---------+ 991
CLNT1_0063_A10.b : actggacttcgggcacacatcccctccacgtgacatgctccctacccctcccactggaag
BFLT1_0110_A09.b : actgaacttcggggcaaacatccccctccagttgacattgctcctaacccctccaactga
BFLT1_0045_H09.b : ttgacccggacttcggggcaccccatcccctccccggagccttgcccccctaccccctcc
CLNT1_0090_D03.b : aactggacttcgggccacacatcccctccacgtgacatgctccctaacccctcccacctg
PST01_0029_A02.b : GACCTGNACTTCGGGGCACACCATCCCCCTCACGTGACCATGCTCCCTAACCCcttccaa
BFLT1_0088_G12.b : tgacctggacctcggggcaaaccatcccctcaacgtgaccaatgctccctaacccctccc


20110601C-003953 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 991
CLNT1_0063_A10.b : cgtgaaacccgggctgttggaaaaaccgtgggagccccattcaaggccgaatgggactac
BFLT1_0110_A09.b : aaccggtgaacccctggccttcggaaaacccgggggaggcaccatcaaggcggaggggaa
BFLT1_0045_H09.b : cacctggaaaccctgaaaccccgtggcttgtggggaaacaaccctggaaggcaccactct
CLNT1_0090_D03.b : gaaacgtgaaccccgtgcttgtcggaaaacccgtggaagcaacattccaggcaggagggg
PST01_0029_A02.b : cctggaagccgtgaaccccgtggctgtccggaaaaccgtgggaggcagcantcaaggcca
BFLT1_0088_G12.b : aacctggaaaccggtgaaccccttggcctgtcgggaaaaacctggggaggcaccaatcga


20110601C-003953 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 991
CLNT1_0063_A10.b : ctccaaaagttcgttcacctggggaaaaatcatggccgcgggtccgggaggcttcttcgg
BFLT1_0110_A09.b : aatctcccaaagtcgggccacccggggaaaaatcattttccgcgggtccggggtaccttt
BFLT1_0045_H09.b : cgggcaggattgggaaaattcttccaaacattttgggtctaccctgggaaaaatcttttt
CLNT1_0090_D03.b : acaatttcaaaaagttggctcacctggggaaaaatcctttcccgcagttcacgggatgct
PST01_0029_A02.b : gaatgggactactctccaaacgttcggctcaacctggggaccaatccattgcctgcaggt
BFLT1_0088_G12.b : ggcaggatggggactaatttcccaaagtttcgctcaccctggggacaaagccattggctg


20110601C-003953 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 991
CLNT1_0063_A10.b : ggcaaggaggtcccaaaaatttcccccgaaccccccctttaaaatgggggggcccccttt
BFLT1_0110_A09.b : ttcttggccagggaatttccgaaaatttccccccgaaccccccttttaaatggggggagc
BFLT1_0045_H09.b : gcctgcgggttccagggtaattctctttttggggcaaagggatatttctcgaaaattata
CLNT1_0090_D03.b : cttttggggccaggatgttccgaaaatttaccctcgattccccatttaaattggggagat
PST01_0029_A02.b : cacggggaggctctttctgtggccagggaaccgtccgaaaattttccccccgaatctcca
BFLT1_0088_G12.b : ccggttcccgggaaactttctttcggggccaaggaatcttccgaaacatttccccttcaa


20110601C-003953 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 991
CLNT1_0063_A10.b : ttgtgtaaaaggggggacacccccggaaaaaagagatttttttttttaatatgggtaaaa
BFLT1_0110_A09.b : ccctgattttataaccgggggtcaccccggggaaaggaggcccctttttaggaactgggc
BFLT1_0045_H09.b : ccctcccaatctcccaattctaaaatggggggaaaccttctttttttataaaaccggggg
CLNT1_0090_D03.b : cctttgatgtaaaacattgggtcaccccccggggaaagaaagttcttttagggaggactg
PST01_0029_A02.b : atttcaaatggtggggaccctccctgattgcaaaacccgggggctaccaccccggggaaa
BFLT1_0088_G12.b : aactcccaactttcaaattggggggacttcttttgatttcaaaaccggtgggtaaccacc


20110601C-003953 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 991
CLNT1_0063_A10.b : gaggaacctttggtggaacaa                                      
BFLT1_0110_A09.b : caaagggggactcttgtggaaaaaaggggggggttcttcctaaggagccccggtgttttt
BFLT1_0045_H09.b : gcacccactccgcgagagaagagagtctctctagtgtgggagatgcgggggacacagagg
CLNT1_0090_D03.b : gggaacagggagacttggtttgaaaacagggcgggagtttctttctaaaaggccccgggt
PST01_0029_A02.b : aaaaggcttctgtctgggggaactcgggcaacaaggggaacccgtggttgaaaacaccga
BFLT1_0088_G12.b : ccgggaaaaagaaggctctctttgttaaggaacaggggggaaaagaggaaacaccttggg


20110601C-003953 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 991
CLNT1_0063_A10.b :                                                             
BFLT1_0110_A09.b : ttaagggact                                                 
BFLT1_0045_H09.b : aatcctgtgggtagaagaaaaaaggcggggatatttcctcacagaagagcctcccgtgtt
CLNT1_0090_D03.b : tcttatttatgggggccccggggt                                   
PST01_0029_A02.b : aggcggggatctccttccccaaaagagccccgtgttcccttattt              
BFLT1_0088_G12.b : g                                                          


20110601C-003953 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 991
CLNT1_0063_A10.b :                                                             
BFLT1_0110_A09.b :                                                             
BFLT1_0045_H09.b : tt                                                         
CLNT1_0090_D03.b :                                                             
PST01_0029_A02.b :                                                             
BFLT1_0088_G12.b :