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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-004052

Length: 1,126

Sequence [FASTA format sequence]
CTTTTGCCAC CATCTTTGTT GGGGGCGGCA ACTTGAGGGC CCAGAAAGCT TGTCGCTGCT
CACTTTCTCG GTATCGTTCC ACGTTCACTA CCTATGCTGG TAAAGTACGA GAAAGAGTTG
GAGCTAAGTA GTGACGCTTT TGCCAAAGAC TTCCCTTTCC GTGGTCCCCT TAACGACAGG
AGGACACGGG AGAGCGCGCG TCGCGCCGAT GACGTTGCGG CGGCTCCTCC ACCATCTTGG
TTGTGGACGG AGGTGGCAAC TTCGGAGCAG CGGAGGGGTA CAGCTGTCTA AATGCCGAGG
CTCGGCGGGC GTGGGCTCTG GCTGGGCCTG GCCGCGGCGG CGGTGGCGGC GATGATCGCT
CGGCTGACAG GCTGGTGGAG TCCCCGCGCT GACTTCCGCC TTTTCATACC CGAGGAGCTG
GCCCGCTATC GCGGCCGCCC TGGGGACCCG GGCCTCTACT TGGCCTTGCT CGGCCGCGTC
TACGATGTGT CCTCTGGCCG GAGGCACTAC GAACCTGGGG CCCCGTATAG CGGCTTCGCA
GGCCGAGATG CATCCAGAGC GTTTGTGACC GGGGACTACT CTGAAACAGG CCTTGTGGAT
GATGTATCTG ACCTGTCATT TTCTGAGATG CTGACACTCC AAAACTGGCT TTCATTCTAC
GAGAAGAATT ATGAATTCAT TGGAAGGGTG AGCGGACGCT TCTATGGCCA GGATGGGCTG
CCCACCCCAG AACTGACCCG GACAGAAGCC ATGATCGCCC GAGGCGTGCA GGCAAATAAG
CAGGACCTGG AAGAGAAGCA GAGGTTCCCC CCGTGCAATG CCGAGTGGAG CTCCGCCCGG
GGCAGCCGCC TCTGGTGTTC CCCGAAGAGT GGAGGTGTGA GCAGAGACTG GACTGGAGTC
CCCAGGAAGC TGTTTAAGCC AGGTGCCAAG GAGCCCCACT GCGTGTGCGT GAAAACAACC
GGCGCCCCTA GCGACCAGAC GCCGGACAGC CCCCCACACA GGAATCGTGG GGACTTGGAC
CACCCCAGCT TGGCCGAGTA CCCAGGCTGC CCACCCCTGG CCACCTCGTG CTCCCTCCCC
TCTAAAGTGG TTCCCTGTAT GCTGCCCACC CACCNAGAGC CCTGCC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYB5D2neuferricin [Homo sapiens]. 426e-119O
Contig/Assembly ProteinPGRMC1membrane-associated progesterone receptor component 1 [Homo sapiens]. 773e-14O
Contig/Assembly ProteinNENFneudesin precursor [Homo sapiens]. 75.96e-14O
Contig/Assembly ProteinPGRMC2membrane-associated progesterone receptor component 2 [Homo sapiens]. 72.85e-13O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCyb5d2neuferricin [Mus musculus]. 401e-112O
Contig/Assembly ProteinNenfneudesin precursor [Mus musculus]. 79.35e-15O
Contig/Assembly ProteinPgrmc1membrane-associated progesterone receptor component 1 [Mus musculus]. 76.63e-14O
Contig/Assembly ProteinPgrmc2membrane-associated progesterone receptor component 2 [Mus musculus]. 728e-13O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC489437PREDICTED: similar to Temporarily Assigned Gene name family member (tag-131) [Canis familiaris]. 415e-116O
Contig/Assembly ProteinPGRMC1membrane-associated progesterone receptor component 1 [Canis lupus familiaris]. 75.97e-14O
Contig/Assembly ProteinLOC476084PREDICTED: similar to progesterone membrane binding protein [Canis familiaris]. 721e-12O
Contig/Assembly ProteinLOC480022PREDICTED: similar to SPUF protein precursor (Secreted protein of unknown function) [Canis familiaris]. 59.37e-09O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC515356PREDICTED: cytochrome b5 domain containing 2-like [Bos taurus]. 441e-124O
Contig/Assembly ProteinLOC515356PREDICTED: cytochrome b5 domain containing 2-like [Bos taurus]. 441e-124O
Contig/Assembly ProteinPGRMC1membrane-associated progesterone receptor component 1 [Bos taurus]. 75.96e-14O
Contig/Assembly ProteinNENFneudesin precursor [Bos taurus]. 75.58e-14O
Contig/Assembly ProteinPGRMC2membrane-associated progesterone receptor component 2 [Bos taurus]. 72.85e-13O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100520452PREDICTED: neuferricin-like [Sus scrofa]. 509e-144O
Contig/Assembly ProteinPGRMC1membrane-associated progesterone receptor component 1 [Sus scrofa]. 75.94e-14O
Contig/Assembly ProteinLOC100621394PREDICTED: neudesin-like [Sus scrofa]. 75.17e-14O
Contig/Assembly ProteinPGRMC2membrane-associated progesterone receptor component 2 [Sus scrofa]. 726e-13O
Contig/Assembly ProteinLOC100525942PREDICTED: neudesin-like [Sus scrofa]. 58.95e-09O


Assembly Members: 7      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
KDN010006C02KDN01_0006_C02.b  
LNG010015C07LNG01_0015_C07.bBP435455 AK231717
LVRM10156A05LVRM1_0156_A05.bBP448450 
OVRM10138G08OVRM1_0138_G08.bBP153209 
PTG010070G06PTG01_0070_G06.bFS710430 
PTG010087G09PTG01_0087_G09.bFS711817 
PTG010099B01PTG01_0099_B01.bFS712444 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
450G320.714WSCCG/P
T200.286CCT/P


Alignment:      TOP

20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LNG01_0015_C07.b : catttggatgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PTG01_0099_B01.b :
PTG01_0087_G09.b :
KDN01_0006_C02.b :
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b :
20110601C-004052 : .......................CTTTTGCCACCATCTTTGTTGGGGGCGGCAACTTGAG
---------+---------+---------+---------+---------+---------+ 37
LNG01_0015_C07.b : xxxxxxxxxxxxxxxxxxxxxxxCTTTTGCCACCATCTTTGTTGGGGGCGGCAACTTGAG
PTG01_0099_B01.b :
PTG01_0087_G09.b :
KDN01_0006_C02.b :
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b :
20110601C-004052 : GGCCCAGAAAGCTTGTCGCTGCTCACTTTCTCGGTATCGTTCCACGTTCACTACCTATGC
---------+---------+---------+---------+---------+---------+ 97
LNG01_0015_C07.b : GGCCCAGAAAGCTTGTCGCTGCTCACTTTCTCGGTATCGTTCCACGTTCACTACCTATGC
PTG01_0099_B01.b :
PTG01_0087_G09.b :
KDN01_0006_C02.b :
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b :
20110601C-004052 : TGGTAAAGTACGAGAAAGAGTTGGAGCTAAGTAGTGACGCTTTTGCCAAAGACTTCCCTT
---------+---------+---------+---------+---------+---------+ 157
LNG01_0015_C07.b : TGGTAAAGTACGAGAAAGAGTTGGAGCTAAGTAGTGACGCTTTTGCCAAAGACTTCCCTT
PTG01_0099_B01.b :
PTG01_0087_G09.b :
KDN01_0006_C02.b :
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b :
20110601C-004052 : TCCGTGGTCCCCTTAACGACAGGAGGACACGGGAGAGCGCGCGTCGCGCCGATGACGTTG
---------+---------+---------+---------+---------+---------+ 217
LNG01_0015_C07.b : TCCGTGGTCCCCTTAACGACAGGAGGACACGGGAGAGCGCGCGTCGCGCCGATGACGTTG
PTG01_0099_B01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxxx
PTG01_0087_G09.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxxx
KDN01_0006_C02.b : nnn
OVRM1_0138_G08.b : ccgttgtcxxxxxxxxxxxx
LVRM1_0156_A05.b : cgttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PTG01_0070_G06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnn
20110601C-004052 : CGGCGGCTCCTCCACCATCTTGGTTGTGGACGGAGGTGGCAACTTCGGAGCAGCGGAGGG
---------+---------+---------+---------+---------+---------+ 277
LNG01_0015_C07.b : CGGCGGCTCCTCCACCATCTTGGTTGTGGACGGAGGTGGCAACTTCGGAGCAGCGGAGGG
PTG01_0099_B01.b : xxxxxxxxxctccaCCATCTTGGTTGTGGACGGAGGTGGCAACTTCGGAGCAGCGGAGGG
PTG01_0087_G09.b : xxxxxxxxxxxxxxccatcttggttgtggacGGAGGTGGCAACTTCGGAGCAGCGGAGGG
KDN01_0006_C02.b : nggtcgctgtggctctggatttggttgtggaGGAGGTGGCAACTTCGGAGCAGCGGAGGG
OVRM1_0138_G08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTCGGAGCAGCGGAGGG
LVRM1_0156_A05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTCGGAGCAGCGGAGGG
PTG01_0070_G06.b : nnnnnnnnnnnnnxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTCGGAGCAGCGGAGGG
20110601C-004052 : GTACAGCTGTCTAAATGCCGAGGCTCGGCGGGCGTGGGCTCTGGCTGGGCCTGGCCGCGG
---------+---------+---------+---------+---------+---------+ 337
LNG01_0015_C07.b : GTACAGCTGTCTAAATGCCGAGGCTCGGCGGGCGTGGGCTCTGGCTGGGCCTGGCCGCGG
PTG01_0099_B01.b : GTACAGCTGTCTAAATGCCGAGGCTCGGCGGGCGTGGGCTCTGGCTGGGCCTGGCCGCGG
PTG01_0087_G09.b : GTACAGCTGTCTAAATGCCGAGGCTCGGCGGGCGTGGGCTCTGGCTGGGCCTGGCCGCGG
KDN01_0006_C02.b : GTACAGCTGTCTAAATGCCGAGGCTCGGCGGGCGTGGGCTCTGGCTGGGCCTGGCCGCGG
OVRM1_0138_G08.b : GTACAGCTGTCTAAATGCCGAGGCTCGGCGGGCGTGGGCTCTGGCTGGGCCTGGCCGCGG
LVRM1_0156_A05.b : GTACAGCTGTCTAAATGCCGAGGCTCGGCGGGCGTGGGCTCTGGCTGGGCCTGGCCGCGG
PTG01_0070_G06.b : GTACAGCTGTCTAAATGCCGAGGCTCGGCGGGCGTGGGCTCTGGCTGGGCCTGGCCGCGG
20110601C-004052 : CGGCGGTGGCGGCGATGATCGCTCGGCTGACAGGCTGGTGGAGTCCCCGCGCTGACTTCC
---------+---------+---------+---------+---------+---------+ 397
LNG01_0015_C07.b : CGGCGGTGGCGGCGATGATCGCTCGGCTGACAGGCTGGTGGAGTCCCCGCGCTGACTTCC
PTG01_0099_B01.b : CGGCGGTGGCGGCGATGATCGCTCGGCTGACAGGCTGGTGGAGTCCCCGCGCTGACTTCC
PTG01_0087_G09.b : CGGCGGTGGCGGCGATGATCGCTCGGCTGACAGGCTGGTGGAGTCCCCGCGCTGACTTCC
KDN01_0006_C02.b : CGGCGGTGGCGGCGATGATCGCTCGGCTGACAGGCTGGTGGAGTCCCCGCGCTGACTTCC
OVRM1_0138_G08.b : CGGCGGTGGCGGCGATGATCGCTCGGCTGACAGGCTGGTGGAGTCCCCGCGCTGACTTCC
LVRM1_0156_A05.b : CGGCGGTGGCGGCGATGATCGCTCGGCTGACAGGCTGGTGGAGTCCCCGCGCTGACTTCC
PTG01_0070_G06.b : CGGCGGTGGCGGCGATGATCGCTCGGCTGACAGGCTGGTGGAGTCCCCGCGCTGACTTCC
20110601C-004052 : GCCTTTTCATACCCGAGGAGCTGGCCCGCTATCGCGGCCGCCCTGGGGACCCGGGCCTCT
---------+---------+---------+---------+---------+---------+ 457
LNG01_0015_C07.b : GCCTTTTCATACCCGAGGAGCTGGCCCGCTATCGCGGCCGCCCTGGGGACCCTGGCCTCT
PTG01_0099_B01.b : GCCTTTTCATACCCGAGGAGCTGGCCCGCTATCGCGGCCGCCCTGGGGACCCGGGCCTCT
PTG01_0087_G09.b : GCCTTTTCATACCCGAGGAGCTGGCCCGCTATCGCGGCCGCCCTGGGGACCCGGGCCTCT
KDN01_0006_C02.b : GCCTTTTCATACCCGAGGAGCTGGCCCGCTATCGCGGCCGCCCTGGGGACCCTGGCCTCT
OVRM1_0138_G08.b : GCCTTTTCATATCCGAGGAGCTGGCCCGCTATCGCGGCCGCCCTGGGGACCCGGGCCTCT
LVRM1_0156_A05.b : GCCTTTTCATACCCGAGGAGCTGGCCCGCTATCGCGGCCGCCCTGGGGACCCGGGCCTCT
PTG01_0070_G06.b : GCCTTTTCATACCCGAGGAGCTGGCCCGCTATCGCGGCCGCCCTGGGGACCCGGGCCTCT
20110601C-004052 : ACTTGGCCTTGCTCGGCCGCGTCTACGATGTGTCCTCTGGCCGGAGGCACTACGAACCTG
---------+---------+---------+---------+---------+---------+ 517
LNG01_0015_C07.b : ACTTGGCCTTGCTCGGCCGCGTCTACGATGTGTCCTCTGGCCGGAGGCACTACGAACCTG
PTG01_0099_B01.b : ACTTGGCCTTGCTCGGCCGCGTCTACGATGTGTCCTCTGGCCGGAGGCACTACGAACCTG
PTG01_0087_G09.b : ACTTGGCCTTGCTCGGCCGCGTCTACGATGTGTCCTCTGGCCGGAGGCACTACGAACCTG
KDN01_0006_C02.b : ACTTGGCCTTGCTCGGCCGCGTCTACGATGTGTCCTCTGGCCGGAGGCACTACGAACCTG
OVRM1_0138_G08.b : ACTTGGCCTTGCTCGGCCGCGTCTACGATGTGTCCTCTGGCCGGAGGCACTACGAACCTG
LVRM1_0156_A05.b : ACTTGGCCTTGCTCGGCCGCGTCTACGATGTGTCCTCTGGCCGGAGGCACTACGAACCTG
PTG01_0070_G06.b : ACTTGGCCTTGCTCGGCCGCGTCTACGATGTGTCCTCTGGCCGGAGGCACTACGAACCTG
20110601C-004052 : GGGCCCCGTATAGCGGCTTCGCAGGCCGAGATGCATCCAGAGCGTTTGTGACCGGGGACT
---------+---------+---------+---------+---------+---------+ 577
LNG01_0015_C07.b : GGGCCCCGTATAGCGGCTTCGCAGGCCGAGATGCATCCAGAGCGTTTGTGACCGGGGACT
PTG01_0099_B01.b : GGGCCCCGTATAGCGGCTTCGCAGGCCGAGATGCATCCAGAGCGTTTGTGACCGGGGACT
PTG01_0087_G09.b : GGGCCCCGTATAGCGGCTTCGCAGGCCGAGATGCATCCAGAGCGTTTGTGACCGGGGACT
KDN01_0006_C02.b : GGGCCCCGTATAGCGGCTTCGCAGGCCGAGATGCATCCAGAGCGTTTGTGACCGGGGACT
OVRM1_0138_G08.b : GGGCCCCGTATAGCGGCTTCGCAGGCCGAGATGCATCCAGAGCGTTTGTGACCGGGGACT
LVRM1_0156_A05.b : GGGCCCCGTATAGCGGCTTCGCAGGCCGAGATGCATCCAGAGCGTTTGTGACCGGGGACT
PTG01_0070_G06.b : GGGCCCCGTATAGCGGCTTCGCAGGCCGAGATGCATCCAGAGCGTTTGTGACCGGGGACT
20110601C-004052 : ACTCTGAAACAGGCCTTGTGGATGATGTATCTGACCTGTCATTTTCTGAGATGCTGACAC
---------+---------+---------+---------+---------+---------+ 637
LNG01_0015_C07.b : ACTCTGAAACAGGCCTTGTGGATGATGTATCTGACCTGTCATTTTCTGAGATGCTGACAC
PTG01_0099_B01.b : ACTCTGAAACAGGCCTTGTGGATGATGTATCTGACCTGTCATTTTCTGAGATGCTGACAC
PTG01_0087_G09.b : ACTCTGAAACAGGCCTTGTGGATGATGTATCTGACCTGTCATTTTCTGAGATGCTGACAC
KDN01_0006_C02.b : ACTCTGAAACAGGCCTTGTGGATGATGTATCTGACCTGTCATTTTCTGAGATGCTGACAC
OVRM1_0138_G08.b : ACTCTGAAACAGGCCTTGTGGATGATGTATCTGACCTGTCATTTTCTGAGATGCTGACAC
LVRM1_0156_A05.b : ACTCTGAAACAGGCCTTGTGGATGATGTATCTGACCTGTCATTTTCTGAGATGCTGACAC
PTG01_0070_G06.b : ACTCTGAAACAGGCCTTGTGGATGATGTATCTGACCTGTCATTTTCTGAGATGCTGACAC
20110601C-004052 : TCCAAAACTGGCTTTCATTCTACGAGAAGAATTATGAATTCATTGGAAGGGTGAGCGGAC
---------+---------+---------+---------+---------+---------+ 697
LNG01_0015_C07.b : TCCAAAACTGGCTTTCATTCTACGAGAAGAATTATGAATTCATTGGAAGGGTGAGCGGAC
PTG01_0099_B01.b : TCCAAAACTGGCTTTCATTCTACGAGAAGAATTATGAATTCATTGGAAGGGTGAGCGGAC
PTG01_0087_G09.b : TCCAAAACTGGCTTTCATTCTACGAGAAGAATTATGAATTCATTGGAAGGGTGAGCGGAC
KDN01_0006_C02.b : TCCAAAACTGGCTTTCATTCTACGAGAAGAATTATGAATTCATTGGAAGGGTGAGCGGAC
OVRM1_0138_G08.b : TCCAAAACTGGCTTTCATTCTACGAGAAGAATTATGAATTCATTGGAAGGGTGAGCGGAC
LVRM1_0156_A05.b : TCCAAAACTGGCTTTCATTCTACGAGAAGAATTATGAATTCATTGGAAGGGTGAGCGGAC
PTG01_0070_G06.b : TCCAAAACTGGCTTTCATTCTACGAGAAGAATTATGAATTCATTGGAAGGGTGAGCGGAC
20110601C-004052 : GCTTCTATGGCCAGGATGGGCTGCCCACCCCAGAACTGACCCGGACAGAAGCCATGATCG
---------+---------+---------+---------+---------+---------+ 757
LNG01_0015_C07.b : GCTTCTATGGCCAGGATGGGCTGCCCACCCCAGAACTGACCCGGACAGAAGCCATGATCG
PTG01_0099_B01.b : GCTTCTATGGCCAGGATGGGCTGCCCACCCCAGAACTGACCCGGACAGAAGCCATGATCG
PTG01_0087_G09.b : GCTTCTATGGCCAGGATGGGCTGCCCACCCCAGAACTGACCCGGACAGAAGCCATGATCG
KDN01_0006_C02.b : GCTTCTATGGCCAGGATGGGCTGCCCACCCCAGAACTGACCCGGACAGAAGCCATGATCG
OVRM1_0138_G08.b : GCTTCTATGGCCAGGATGGGCTGCCCACCCCAGAACTGACCCGGACAGAAGCCATGATCG
LVRM1_0156_A05.b : GCTTCTATGGCCAGGATGGGCTGCCCACCCCAGAACTGACCCGGACAGAAGCCATGATCG
PTG01_0070_G06.b : GCTTCTATGGCCAGGATGGGCTGCCCACCCCAGAACTGACCCGGACAGAAGCCATGATCG
20110601C-004052 : CCCGAGGCGTGCAGGCAAATAAGCAGGACCTGGAAGAGAAGCAGAGGTTCCCCCCGTGCA
---------+---------+---------+---------+---------+---------+ 817
LNG01_0015_C07.b : CCCGAGGCGTGCAGGCAAATAAGCAGGACCTGGAAGAGAAGCAGAGGTTCCCCCCGTGCA
PTG01_0099_B01.b : GCCGAGGCGTGCAGGCAAATAAGCAGGACCTGGAAGAAGAGCAGAGGT*CCCCCCGTGCA
PTG01_0087_G09.b : CCCGAGGCGTGCAGGCAAATAAGCAGGACCTGGAAGAGAAGCAGAGGTTCCCCCCCTGCA
KDN01_0006_C02.b : CCCGAGGCGTGCAGGCAAATAAGCAGGACCTGGAAGAGAAGCAGAGGTTCCCCCCGTGCA
OVRM1_0138_G08.b : CCCGAGGCGTGCAGGCAAATAAGCAGGACCTGGAAGAGAAGCAGAGGTTCCCCCCGTGCN
LVRM1_0156_A05.b : CCCGAGGCGTGCAGGCAAATAAGCAGGACCTGGAAGAGAAGCAGAGGTTCCCCCCGTGCA
PTG01_0070_G06.b : CCCGAGGCGTGCAGGCAAATAAGCAGGACCTGGAAGAGAAGCAGAGGTTCCCCCCGTGCA
20110601C-004052 : ATGCCGAGTGGAGCTCCGCCCGGGGCAGCCGCCTCTGGTGTTCCCCGAAGAGTGGAGGTG
---------+---------+---------+---------+---------+---------+ 877
LNG01_0015_C07.b : ATGCCGAGTGGAGCTCCGCCCGGGGCAGCCGCCTCTGGTGTTCCCCGAAGAGTGGAGGTG
PTG01_0099_B01.b : ATGCCAAGTGGAttcccgccggggcagccgcctcgggggtccccaaaaatggaagtgtgg
PTG01_0087_G09.b : ATGCCGAGTGGAGCTCCGCCCGGGGCAGCCGCCTCTGGTGTTCCCCGA*GAGTGGAGGTG
KDN01_0006_C02.b : ATGCCGAGTGGAGCTCCGCCCGGGGCAGCCGCCTCTGGTGTTCCCCGAAGAGTGGAGGTG
OVRM1_0138_G08.b : ATGCCGAGTGGAGCTCCGCCCGGGGCAGCCGCCTCTGGTGTTCCCCGCAAAGTGGAGGTG
LVRM1_0156_A05.b : ATGCCGAGTGGAGTTCCGCCCGGGGCAGCCGCCTCTGGTGTTCCCCGAAGAGTGGAGGTG
PTG01_0070_G06.b : ATGCCGAGTGGAGTTCCGCCCGGGGCAGCCGCCTCTGGTGTTCCCCGAAGAGTGGAGGTG
20110601C-004052 : TGAGCAGAGACTGGACTGGAGTCCCCAGGAAGCTGTTTAAGCCAGGTGCCAAGG*AGCCC
---------+---------+---------+---------+---------+---------+ 936
LNG01_0015_C07.b : TGAGCAGAGACTGGACTGGAGTCCCCAGAAAGCTGTTTAAGCCAGGTGCCCAGGGAGCCC
PTG01_0099_B01.b : acaaaaactggactgggatccccagaaactgttttaccccaggggcaggggacccccttg
PTG01_0087_G09.b : TGAGCAGAGACTGGACTGGAGTCCCCAGGAAGCTGTTTAAG*CAGGTGCCAAGG*AGCCC
KDN01_0006_C02.b : TGAGCAGAGACTGGACTGGAGTCCCCAGGAAGCTGTTTAAGCCAGGTGCCAAGG*AGCCC
OVRM1_0138_G08.b : TGAGCAGAGACTGGACTGGAGTCCCCAGGAAGCTGTTTAAGCCAGGTGCCAAGG*AGCCC
LVRM1_0156_A05.b : TGAGCAGAGACTGGACTGGAGTCCCCAGGAAGCTGTTTANCCCAGGTGCCAAGG**ACCC
PTG01_0070_G06.b : TGAGCAGAGACTGGACTGGAGTCCCCAGGAAGCTGTTTNAGCCAGGTGCCAAGG*AGCCC
20110601C-004052 : CACTGCGTGTGCGTGAAAACAACC*GGCGCCCCTAGCGACCAGACGCCGGACAGCCCCCC
---------+---------+---------+---------+---------+---------+ 995
LNG01_0015_C07.b : CACTGCGTGTGCGTGAAAACAACC*GGCGCCCCTAccaaccagacgccgggacagccccc
PTG01_0099_B01.b : ctgtggcgtgaaaacaaccgggccccttaggacccaaacccggaagcccccccaaaagga
PTG01_0087_G09.b : CACTGCGTGTGCGTGAAAACAACC*GGCGCCCCTAGCGACCAGACGCCGGAcagccccca
KDN01_0006_C02.b : CACTGCGTGTGCGTGAAAACAACC*GGCGCCCCTAGCGACCAGACGCCGGACAGCCCCCC
OVRM1_0138_G08.b : CACTGCGTGTGCGTGAAGACAACC*GGGCGCCCtagcgaccagacgccggacaggcc
LVRM1_0156_A05.b : CACTGCGTGTGCGTGNAAACTACC*GGCGCCCCTAGCGACTAGACGccggac
PTG01_0070_G06.b : CACTGCGTGTGCGTNGAAACAACCGGGCGCCCCTAGCGACCAGACGGCCGACAGCCCCCC
20110601C-004052 : ACACAGGAATCGTGGGGACTTGGACCACCCCAGCTTGGCCGAGTACCCAGGCTGCCCACC
---------+---------+---------+---------+---------+---------+ 1055
LNG01_0015_C07.b : ccacccagggaaccgtgggggacttgggaaccacccccagccttggccccaaattacccc
PTG01_0099_B01.b : atcggggggacttggaccccccggtttggccaataccaggggtgcccccccggggcatcc
PTG01_0087_G09.b : cacaggaatcgtggggacttggaccaccccacttgcccagtacccaggctgcccaccctg
KDN01_0006_C02.b : ACACAGGAATCGTGGGGACTTGGACCACCCCAGCTTGGCCGAGTACCCAGGCTGCCCACC
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : ACACAGGGATCGTGGGAACTTGGACCACCCCcgctttgcccgagtccccgggctgcccac
20110601C-004052 : CCTGGCCACCTCGTGCTCCCTCCCCTCTAAAGTGGTTCCCTGTATGCTGCCCACCCACCN
---------+---------+---------+---------+---------+---------+ 1115
LNG01_0015_C07.b : aagcctggcccccccccctgggcccccccctcctggggttcccctccccccccctcttaa
PTG01_0099_B01.b : ggggccccccccctcaaaaggggttccccttgggggccccccccccaaaacccccgcgga
PTG01_0087_G09.b : ggcatctcgtgctcctccccctctaagtggtccctgtaggctgcccaccacaaaaaccct
KDN01_0006_C02.b : CCTGGCCACCTCGTGCTCCCTCCCCTCTAAAGTGGTTCCCTGTATGCTGCCCACCCACCN
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : ccctgggcatcctgtggctcctccccctcctaagtgggttccctggttgctggccccccc
20110601C-004052 : AGAGCCCTGCC.................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b : aaaggggggtttcccccgtggtattgggcccttgcccccccaccccccccccccccaaaa
PTG01_0099_B01.b : aacacaagggcccccccctaaaacaaagagccccaaaaaaaaaaaagtgttttttccccc
PTG01_0087_G09.b : gcctgaaacctagtggctccggactgaaccaaaaggcctgaaaggaaagacctggctttt
KDN01_0006_C02.b : AGAGCCCTGCCtggnagcctagtggctcctgaccctgaccnagagggcctggaangaaag
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : ccaaaaccctggccgggagccctaatggctcccggcctgaaccaaaaaggcctgaaagga
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b : aaaaacccccccc
PTG01_0099_B01.b : aaaagataggaacccccccccaaagaaccaattttgggggggggagcccattgtggaacc
PTG01_0087_G09.b : ctccccaaactgactgagccgcctcccgtgactccctttgggggccgaagcccaaattgg
KDN01_0006_C02.b : ancgtggctgtgctccccgaacgtgactgatgccgcctcactgtgactcaccatctggtg
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : aaggaacgtggcttgctccccaaacgtactgatgcccccccccttgactcccctttcggg
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b :
PTG01_0099_B01.b : cgcggggaaaacaagtttttttcccaggggcctttttttcctcccccctttttttggacc
PTG01_0087_G09.b : aaacggcccggaacgtaaactgttttcccctgggccctttattcctccccccctttttga
KDN01_0006_C02.b : cctgagncaacgcttgggcacctgcgggtacggtcagcttgtttccgcccttgggctttc
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : ggcctgagccccactttggaaccgtgccgtaacgttaaccgtttttcccctgggcccctt
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b :
PTG01_0099_B01.b : ccggggggggggccccccacaaacacctcattttggggggggggaacaaaaggggggggc
PTG01_0087_G09.b : acccccgggggggttacccccccaaaccatttaaattttcgggggggacaaaaggggggg
KDN01_0006_C02.b : atctctcgcccaccgcttggagtcgccaggggattgagcccccaagacaattcaaacttg
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : ttttcccccccatcccttttgagccccccgggggagtgggccccccaaaaccctctaaat
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b :
PTG01_0099_B01.b : cccgcgcgtcttttcctcttttgggggcccaaaaatgtggtgggccttcttcccaccccc
PTG01_0087_G09.b : agcccgggatctttccaaaatttggcccccaataatgtggcccggcttaaccccccgttg
KDN01_0006_C02.b : cgggtgaaccacaaaggcgggaacccgaagcttcttcaaactgggaccccaaaatatttg
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : tgccggggggacccaaaggggggggacccccgaggttcttcccaattttggaaccccaaa
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b :
PTG01_0099_B01.b : ggggggggggggggggcggaaaaaaaccctttttttctccccccccaaaaaaaaccanaa
PTG01_0087_G09.b : ggggaagggggcggaaaaaaaaccccttcccttcccttaaaaaaaacccccaaaaggggt
KDN01_0006_C02.b : cccggcttaatcaacctgtcgggataggggcctggaaaaaaaccctcttcctaccctcaa
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : tttggggccggtttctacccccccggggggggagggggcccgaaaaaaaccctttttctt
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b :
PTG01_0099_B01.b : aaagggtggttgggtgtgttaaaaaaacctccccccccccggggggagctgttt
PTG01_0087_G09.b : aaaaggggccccaaagcgccccccaaagggggaaactctcctctttttaacccaaaagga
KDN01_0006_C02.b : aaagaaacttcaaaattggtaataaggggcccaaaagcttccccacacggggaaattctt
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : cttcccaaaaaaacacccaaaaggtggttattggggttccaaaggcttcccccacggggg
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b :
PTG01_0099_B01.b :
PTG01_0087_G09.b : aggggggggaaaaaggggggacccctcccggggggaaaaaagggaagttctccc
KDN01_0006_C02.b : cgctttgtaaaccccaaagggagggggggaaaacgggggaccccccccggggaaaaaaag
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : ggatttctctcttttgtaaaacaaaaaaagaggggggggggaaaagggggggcccccccc
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b :
PTG01_0099_B01.b :
PTG01_0087_G09.b :
KDN01_0006_C02.b : ggaaggcctccgctcggcccctccccttgtccccgggtgtttccccggccccctcggaaa
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : cggggaaaaaagggaggaagctcttttccgcccccccccttttttttcccccggttgtac
20110601C-004052 : ............................................................
---------+---------+---------+---------+---------+---------+ 1126
LNG01_0015_C07.b :
PTG01_0099_B01.b :
PTG01_0087_G09.b :
KDN01_0006_C02.b : attaattttgcccctcc
OVRM1_0138_G08.b :
LVRM1_0156_A05.b :
PTG01_0070_G06.b : accccaatcaacaaa