Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-004097

Sequence: [FASTA format sequence] TTATAGCTTC CTGAGACAGT GGCCAGGAAC TGTGCAGAGA GATCTGACAC AGAGGGGATT CGGACAACCT CCAGTTTTGA AATTGGCATC CTTTCCCCAG TTGGCCCAGG CACAATGCCC AAGGAGTTTG AGGCAGCCAC AAGAGCTGTG GTCCGAGAGG TGGATCCTCG GGGGGATTGG ATTGCCGTCC GAAGCCTCAC TGATGCTGAC AGATTCCACT GCCTCTACCT GGTGAAGAAG AAGAAACGGT TCTTTGGCCA CCAGTACGAC AAGGCAGACC TTAGCCTACT GGACATCCTG GAGGTGCAGG AGGGTGACGA GCTCTTTGAT AAGCTGGTGT CTGGGCTCCA AGACCATAAG GCTCCGTTCC GAGTTACAGA CAACGTGGAT TCAAAGGGAG GTTTGACAGT GAAATTACCT GAAAACATGA TGTTTGAAGT GGCCACCTAC AGGTCCAGGA AGTGCAACGC TGAGGTCTCG GGGTCCCGGA CACCCAGGCA ACTCCTGGCT GCCCTTGAGA ACACGAAGCT GAAGCGTAAA CTGCCCGATT CGTTCCAATC GATCCGAGCA ATGAGAGAAG ACCTGTATCT GGTGACAGAA ACCCTGACGA CGACAAAGAC TGAAACCCTG GAAAGCGAAC AAGGATGTGT TATTCAGCTC CTGGTGGATT GTTTGGGTTT CCGATACAGA CGCAAGCGTC AAAAGGCGGT GACCGTCCCC CCTGGGACAG TCCTGGGCTA TCGCCTAAAG CAGCTCGTCT TCCCCAACGA GGAGAGCATG AATATTATTT CTGAAAAAAC AAAATCCTTT CCACACGAGA AAGATGGTGG TGCATCTTGC TTAGGGAAGT CCTTGAGTTT GGAGGGTTCC AGAAGCATGA AGGAAAAGGT GCAGGACCTG GTGAGGGTCC TCCAGGATCT GACGGAGAAG GAGCAAAA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
GSDMB gasdermin-B isoform 3 [Homo sapiens]. 220 1e-57 O

GSDMB gasdermin-B isoform 1 [Homo sapiens]. 199 2e-51 O

GSDMB gasdermin-B isoform 4 [Homo sapiens]. 197 1e-50 O

GSDMB gasdermin-B isoform 2 [Homo sapiens]. 180 2e-45 O

GSDMA gasdermin-A [Homo sapiens]. 71.2 1e-12 O

Locus	Definition	Score	E value	FL
GSDMB	gasdermin-B isoform 3 [Homo sapiens].	220	1e-57	O
GSDMB	gasdermin-B isoform 1 [Homo sapiens].	199	2e-51	O
GSDMB	gasdermin-B isoform 4 [Homo sapiens].	197	1e-50	O
GSDMB	gasdermin-B isoform 2 [Homo sapiens].	180	2e-45	O
GSDMA	gasdermin-A [Homo sapiens].	71.2	1e-12	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Gsdma gasdermin-A [Mus musculus]. 79 5e-15 O

Gsdma2 gasdermin-A2 [Mus musculus]. 73.9 2e-13 O

Gsdma3 gasdermin-A3 [Mus musculus]. 66.6 3e-11 O

Locus	Definition	Score	E value	FL
Gsdma	gasdermin-A [Mus musculus].	79	5e-15	O
Gsdma2	gasdermin-A2 [Mus musculus].	73.9	2e-13	O
Gsdma3	gasdermin-A3 [Mus musculus].	66.6	3e-11	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC608276 PREDICTED: similar to gasdermin 1 [Canis familiaris]. 70.5 2e-12 O

		Locus	Definition	Score	E value	FL
		LOC608276	PREDICTED: similar to gasdermin 1 [Canis familiaris].	70.5	2e-12	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
GSDMB PREDICTED: gasdermin B [Bos taurus]. 230 1e-60 O

GSDMB PREDICTED: gasdermin B isoform 2 [Bos taurus]. 229 2e-60 O

GSDMA gasdermin-A [Bos taurus]. 68.6 8e-12 O

Locus	Definition	Score	E value	FL
GSDMB	PREDICTED: gasdermin B [Bos taurus].	230	1e-60	O
GSDMB	PREDICTED: gasdermin B isoform 2 [Bos taurus].	229	2e-60	O
GSDMA	gasdermin-A [Bos taurus].	68.6	8e-12	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100515574 PREDICTED: gasdermin-B-like [Sus scrofa]. 499 e-142 O

LOC100513041 PREDICTED: gasdermin-B-like [Sus scrofa]. 499 e-142 O

LOC100624068 PREDICTED: gasdermin-B-like [Sus scrofa]. 159 2e-39 O

LOC100516107 PREDICTED: putative LRRC3-like protein ENSP00000367157-like [Sus scrofa]. 105 4e-23 O

LOC100623880 PREDICTED: putative LRRC3-like protein ENSP00000367157-like [Sus scrofa]. 105 4e-23 O

LOC100624344 PREDICTED: hypothetical protein LOC100624344 [Sus scrofa]. 103 2e-22

LOC100511405 PREDICTED: gasdermin-A-like [Sus scrofa]. 72 4e-13 O

LOC100512434 PREDICTED: gasdermin-A-like [Sus scrofa]. 70.9 1e-12 O

Locus	Definition	Score	E value	FL
LOC100515574	PREDICTED: gasdermin-B-like [Sus scrofa].	499	e-142	O
LOC100513041	PREDICTED: gasdermin-B-like [Sus scrofa].	499	e-142	O
LOC100624068	PREDICTED: gasdermin-B-like [Sus scrofa].	159	2e-39	O
LOC100516107	PREDICTED: putative LRRC3-like protein ENSP00000367157-like [Sus scrofa].	105	4e-23	O
LOC100623880	PREDICTED: putative LRRC3-like protein ENSP00000367157-like [Sus scrofa].	105	4e-23	O
LOC100624344	PREDICTED: hypothetical protein LOC100624344 [Sus scrofa].	103	2e-22
LOC100511405	PREDICTED: gasdermin-A-like [Sus scrofa].	72	4e-13	O
LOC100512434	PREDICTED: gasdermin-A-like [Sus scrofa].	70.9	1e-12	O

Assembly Members: 7 TOP

Library Plate Loc. Read Name Accession Full Seq.

CLNT1 0005 A07 CLNT1_0005_A07.b FS657401
CLNT1 0009 A03 CLNT1_0009_A03.b FS657726
CLNT1 0033 H06 CLNT1_0033_H06.b FS659677
CLNT1 0078 G01 CLNT1_0078_G01.b
ITT01 0030 B10 ITT01_0030_B10.b BW978678 AK344987
ITT01 0050 B09 ITT01_0050_B09.b BW980403 AK345065
ITT01 0077 E08 ITT01_0077_E08.b BW982856 AK345188

SNPs: 4 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
170 A 3 0 0.500 W N CAG/Q
G 3 0 0.500 CGG/R
285 A 2 0 0.286 W N AGA/R
C 5 0 0.714 AGC/S
289 C 5 0 0.714 W N CTG/L
G 2 0 0.286 GTG/V
721 C 5 0 0.714 W N CCT/P
T 2 0 0.286 TCT/S

Alignment: TOP

20110601C-004097 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
ITT01_0050_B09.b :          nnnggatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0077_E08.b :           nnngggagtaagcagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0078_G01.b : nggcttttcnngnntccgtcagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0005_A07.b :              nccgtattnnngggactccctcagcgttacgatgxxxxxxxxxxxxx
CLNT1_0033_H06.b :                          nntttcgttagctgtacgaggxxxxxxxxxxxxxx
CLNT1_0009_A03.b :                          gatacgttcagcgnacgxxxxxxxxxxxxxxxxxx
ITT01_0030_B10.b :                                               nnggatgaacaxxx


20110601C-004097 : ......TTATAGCTTCCTGAGACAGTGGCCAGGAACTGTGCAGAGAGATCTGACACAGAG
                   ---------+---------+---------+---------+---------+---------+ 54
ITT01_0050_B09.b : xxxxxxTTATAGCTTCCTGAGACAGTGGCCAGGAACTGTGCAGAGAGATCTGACACAGAG
ITT01_0077_E08.b : xxxxxxxTATAGCTTCCTGAGACAGTGGCCAGGAACTGTGCAGAGAGATCTGACACAGAG
CLNT1_0078_G01.b : xxxxxxxxxxxxxxxxxcccttacaagaccaggaactGTGCAGAGAGATCTGACACAGAG
CLNT1_0005_A07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGCAGAGAGATCTGACACAGAG
CLNT1_0033_H06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgGTGCAGAGAGATCTGACACAGAG
CLNT1_0009_A03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGCAGAGAGATCTGACACAGAG
ITT01_0030_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGAGAGATCTGACACAGAG


20110601C-004097 : GGGATTCGGACAACCTCCAGTTTTGAAATTGGCATCCTTTCCCCAGTTGGCCCAGGCACA
                   ---------+---------+---------+---------+---------+---------+ 114
ITT01_0050_B09.b : GGGATTCGGACAACCTCCAGTTTTGAAATTGGCATCCTTTCCCCAGTTGGCCCAGGCACA
ITT01_0077_E08.b : GGGATTCGGACAACCTCCAGTTTTGAAATTGGCATCCTTTCCCCAGTTGGCCCAGGCACA
CLNT1_0078_G01.b : GGCTTTCAGACAACCTCCAGTTTTGAAATTGGCATCCTTTCCCCAGTTGGCCCAGGCACA
CLNT1_0005_A07.b : GGGATTCGGACAACCTCCAGTTTTGAAATTGGCATCCTTTCCCCAGTTGGCCCAGGCACA
CLNT1_0033_H06.b : GGGATTCGGACAACCTCCAGTTTTGAAATTGGCATCCTTTCCCCAGTTGGCCCAGGCACA
CLNT1_0009_A03.b : GGGATTCGGACAACCTCCAGTTTTGAAATTGGCATCCTTTCCCCAGTTGGCCCAGGCACA
ITT01_0030_B10.b : GGGATTCGGACAACCTCCAGTTTTGAAATTGGCATCCTTTCCCCAGTTGGCCCAGGCACA


20110601C-004097 : ATGCCCAAGGAGTTTGAGGCAGCCACAAGAGCTGTGGTCCGAGAGGTGGATCCTCGGGGG
                   ---------+---------+---------+---------+---------+---------+ 174
ITT01_0050_B09.b : ATGCCCAAGGAGTTTGAGGCAGCCACAAGAGCTGTGGTCCGAGAGGTGGATCCTCGGGGG
ITT01_0077_E08.b : ATGCCCAAGGAGTTTGAGGCAGCCACAAGAGCTGTGGTCCGAGAGGTGGATCCTCGGGGG
CLNT1_0078_G01.b : ATGCCCAAGGAGTTTGAGGCAGCCACAAGAGCTGTGGTCCGAGAGGTGGATCCTCAGGGG
CLNT1_0005_A07.b : ATGCCCAAGGAGTTTGAGGCAGCCACAAGAGCTGTGGTCCGAGAGGTGGATCCTCGGGGG
CLNT1_0033_H06.b : ATGCCCAAGGAGTTTGAGGCAGCCACAAGAGCTGTGGTCCGAGAGGTGGATCCTCAGGGG
CLNT1_0009_A03.b : ATGCCCAAGGAGTTTGAGGCAGCCACAAGAGCTGTGGTCCGAGAGGTGGATCCTCGGGGG
ITT01_0030_B10.b : ATGCCCAAGGAGTTTGAGGCAGCCACAAGAGCTGTGGTCCGAGAGGTGGATCCTCAGGGG


20110601C-004097 : GATTGGATTGCCGTCCGAAGCCTCACTGATGCTGACAGATTCCACTGCCTCTACCTGGTG
                   ---------+---------+---------+---------+---------+---------+ 234
ITT01_0050_B09.b : GATTGGATTGCCGTCCGAAGCCTCACTGATGCTGACAGATTCCACTGCCTCTACCTGGTG
ITT01_0077_E08.b : GATTGGATTGCCGTCCGAAGCCTCACTGATGCTGACAGATTCCACTGCCTCTACCTGGTG
CLNT1_0078_G01.b : GATTGGATTGCCGTCCGAAGCCTCACTGATGCTGACAGATTCCACTGCCTCTACCTGGTG
CLNT1_0005_A07.b : GATTGGATTGCCGTCCGAAGCCTCACTGATGCTGACAGATTCCACTGCCTCTACCTGGTG
CLNT1_0033_H06.b : GATTGGATTGCCGTCCGAAGCCTCACTGATGCTGACAGATTCCACTGCCTCTACCTGGTG
CLNT1_0009_A03.b : GATTGGATTGCCGTCCGAAGCCTCACTGATGCTGACAGATTCCACTGCCTCTACCTGGTG
ITT01_0030_B10.b : GATTGGATTGCCGTCCGAAGCCTCACTGATGCTGACAGATTCCACTGCCTCTACCTGGTG


20110601C-004097 : AAGAAGAAGAAACGGTTCTTTGGCCACCAGTACGACAAGGCAGACCTTAGCCTACTGGAC
                   ---------+---------+---------+---------+---------+---------+ 294
ITT01_0050_B09.b : AAGAAGAAGAAACGGTTCTTTGGCCACCAGTACGACAAGGCAGACCTTAGCCTACTGGAC
ITT01_0077_E08.b : AAGAAGAAGAAACGGTTCTTTGGCCACCAGTACGACAAGGCAGACCTTAGCCTACTGGAC
CLNT1_0078_G01.b : AAGAAGAAGAAACGGTTCTTTGGCCACCAGTACGACAAGGCAGACCTTAGACTAGTGGAC
CLNT1_0005_A07.b : AAGAAGAAGAAACGGTTCTTTGGCCACCAGTACGACAAGGCAGACCTTAGCCTACTGGAC
CLNT1_0033_H06.b : AAGAAGAAGAAACGGTTCTTTGGCCACCAGTACGACAAGGCAGACCTTAGACTAGTGGAC
CLNT1_0009_A03.b : AAGAAGAAGAAACGGTTCTTTGGCCACCAGTACGACAAGGCAGACCTTAGCCTACTGGAC
ITT01_0030_B10.b : AAGAAGAAGAAACGGTTCTTTGGCCACCAGTACGACAAGGCAGACCTTAGCCTACTGGAC


20110601C-004097 : ATCCTGGAGGTGCAGGAGGGTGACGAGCTCTTTGATAAGCTGGTGTCTGGGCTCCAAGAC
                   ---------+---------+---------+---------+---------+---------+ 354
ITT01_0050_B09.b : ATCCTGGAGGTGCAGGAGGGTGACGAGCTCTTTGATAAGCTGGTGTCTGGGCTCCAAGAC
ITT01_0077_E08.b : ATCCTGGAGGTGCAGGAGGGTGACGAGCTCTTTGATAAGCTGGTGTCTGGGCTCCAAGAC
CLNT1_0078_G01.b : ATCCTGGAGGTGCAGGAGGGTGACGAGCTCTTTGATAAGCTGGTGTCTGGGCTCCAAGAC
CLNT1_0005_A07.b : ATCCTGGAGGTGCAGGAGGGTGACGAGCTCTTTGATAAGCTGGTGTCTGGGCTCCAAGAC
CLNT1_0033_H06.b : ATCCTGGAGGTGCAGGAGGGTGACGAGCTCTTTGATAAGCTGGTGTCTGGGCTCCAAGAC
CLNT1_0009_A03.b : ATCCTGGAGGTGCAGGAGGGTGACGAGCTCTTTGATAAGCTGGTGTCTGGGCTCCAAGAC
ITT01_0030_B10.b : ATCCTGGAGGTGCAGGAGGGTGACGAGCTCTTTGATAAGCTGGTGTCTGGGCTCCAAGAC


20110601C-004097 : CATAAGGCTCCGTTCCGAGTTACAGACAACGTGGATTCAAAGGGAGGTTTGACAGTGAAA
                   ---------+---------+---------+---------+---------+---------+ 414
ITT01_0050_B09.b : CATAAGGCTCCGTTCCGAGTTACAGACAACGTGGATTCAAAGGGAGGTTTGACAGTGAAA
ITT01_0077_E08.b : CATAAGGCTCCGTTCCGAGTTACAGACAACGTGGATTCAAAGGGAGGTTTGACAGTGAAA
CLNT1_0078_G01.b : CATAAGGCTCCGTTCCGAGTTACAGACAACGTGGATTCAAAGGGAGGTTTGACAGTGAAA
CLNT1_0005_A07.b : CATAAGGCTCCGTTCCGAGTTACAGACAACGTGGATTCAAAGGGAGGTTTGACAGTGAAA
CLNT1_0033_H06.b : CATAAGGCTCCGTTCCGAGTTACAGACAACGTGGATTCAAAGGGAGGTTTGACAGTGAAA
CLNT1_0009_A03.b : CATAAGGCTCCGTTCCGAGTTACAGACAACGTGGATTCAAAGGGAGGTTTGACAGTGAAA
ITT01_0030_B10.b : CATAAGGCTCCGTTCCGAGTTACAGACAACGTGGATTCAAAGGGAGGTTTGACAGTGAAA


20110601C-004097 : TTACCTGAAAACATGATGTTTGAAGTGGCCACCTACAGGTCCAGGAAGTGCAACGCTGAG
                   ---------+---------+---------+---------+---------+---------+ 474
ITT01_0050_B09.b : TTACCTGAAAACATGATGTTTGAAGTGGCCACCTACAGGTCCAGGAAGTGCAACGCTGAG
ITT01_0077_E08.b : TTACCTGAAAACATGATGTTTGAAGTGGCCACCTACAGGTCCAGGAAGTGCAACGCTGAG
CLNT1_0078_G01.b : TTACCTGAAAACATGATGTTTGAAGTGGCCACCTACAGGTCCAGGAAGTGCAACGCTGAG
CLNT1_0005_A07.b : TTACCTGAAAACATGATGTTTGAAGTGGCCACCTACAGGTCCAGGAAGTGCAACGCTGAG
CLNT1_0033_H06.b : TTACCTGAAAACATGATGTTTGAAGTGGCCACCTACAGGTCCAGGAAGTGCAACGCTGAG
CLNT1_0009_A03.b : TTACCTGAAAACATGATGTTTGAAGTGGCCACCTACAGGTCCAGGAAGTGCAACGCTGAG
ITT01_0030_B10.b : TTACCTGAAAACATGATGTTTGAAGTGGCCACCTACAGGTCCAGGAAGTGCAACGCTGAG


20110601C-004097 : GTCTCGGGGTCCCGGACACCCAGGCAACTCCTGGCTGCCCTTGAGAACACGAAGCTGAAG
                   ---------+---------+---------+---------+---------+---------+ 534
ITT01_0050_B09.b : GTCTCGGGGTCCCGGACACCCAGGCAACTCCTGGCTGCCCTTGAGAACACGAAGCTGAAG
ITT01_0077_E08.b : GTCTCGGGGTCCCGGACACCCAGGCAACTCCTGGCTGCCCTTGAGAACACGAAGCTGAAG
CLNT1_0078_G01.b : GTCTCGGGGTCCCGGACACCCAGGCAACTCCTGGCTGCCCTTGAGAACACGAAGCTGAAG
CLNT1_0005_A07.b : GTCTCGGGGTCCCGGACACCCAGGCAACTCCTGGCTGCCCTTGAGAACACGAAGCTGAAG
CLNT1_0033_H06.b : GTCTCGGGGTCCCGGACACCCAGGCAACTCCTGGCTGCCCTTGAGAACACGAAGCTGAAG
CLNT1_0009_A03.b : GTCTCGGGGTCCCGGACACCCAGGCAACTCCTGGCTGCCCTTGAGAACACGAAGCTGAAG
ITT01_0030_B10.b : GTCTCGGGGTCCCGGACACCCAGGCAACTCCTGGCTGCCCTTGAGAACACGAAGCTGAAG


20110601C-004097 : CGTAAACTGCCCGATTCGTTCCAATCGATCCGAGCAATGAGAGAAGACCTGTATCTGGTG
                   ---------+---------+---------+---------+---------+---------+ 594
ITT01_0050_B09.b : CGTAAACTGCCCGATTCGTTCCAATCGATCCGAGCAATGAGAGAAGACCTGTATCTGGTG
ITT01_0077_E08.b : CGTAAACTGCCCGATTCGTTCCAATCGATCCGAGCAATGAGAGAAGACCTGTATCTGGTG
CLNT1_0078_G01.b : CGTAAACTGCCCGATTCGTTCCAATCGATCCGAGCAATGAGAGAAGACCTGTATCTGGTG
CLNT1_0005_A07.b : CGTAAACTGCCCGATTCGTTCCAATCGATCCGAGCAATGAGAGAAGACCTGTATCTGGTG
CLNT1_0033_H06.b : CGTAAACTGCCCGATTCGTTCCAATCGATCCGAGCAATGAGAGAAGACCTGTATCTGGTG
CLNT1_0009_A03.b : CGTAAACTGCCCGATTCGTTCCAATCGATCCGAGCAATGAGAGAAGACCTGTATCTGGTG
ITT01_0030_B10.b : CGTAAACTGCCCGATTCGTTCCAATCGATCCGAGCAATGAGAGAAGACCTGTATCTGGTG


20110601C-004097 : ACAGAAACCCTGACGACGACAAAGACTGAAACCCTGGAAAGCGAACAAGGATGTGTTATT
                   ---------+---------+---------+---------+---------+---------+ 654
ITT01_0050_B09.b : ACAGAAACCCTGACGACGACAAAGACTGAAACCCTGGAAAGCGAACAAGGATGTGTTATT
ITT01_0077_E08.b : ACAGAAACCCTGACGACGACAAAGACTGAAACCCTGGAAAGCGAACAAGGATGTGTTATT
CLNT1_0078_G01.b : ACAGAAACCCTGACGACGACNAAGACTGAAACCCTGGAAAGCGAGCAAGGATGTGTCATT
CLNT1_0005_A07.b : ACAGAAACCCTGACGACGACAAAGACTGAAACCCTGGAAAGCGAACAAGGATGTGTTATT
CLNT1_0033_H06.b : ACAGAAACCCTGACGACGACNAAGACTGAAACCCTGGAAAGCGAACAAGGATGTGTTATT
CLNT1_0009_A03.b : ACAGAAACCCTGACGACGACAAAGACTGAAACCCTGGAAAGCGAACAAGGATGTGTTATT
ITT01_0030_B10.b : ACAGAAACCCTGACGACGACAAAGACTGAAACCCTGGAAAGCGAACAAGGATGTGTTATT


20110601C-004097 : CAGCTCCTGGTGGATTGTTTGGGTTTCCGATACAGACGCAAGCGTCAAAAGGCGGTGACC
                   ---------+---------+---------+---------+---------+---------+ 714
ITT01_0050_B09.b : CAGCTCCTGGTGGATTGTTTGGGTTTCCGATACAGACGCAAGCGTCAAAAGGCGGTGACC
ITT01_0077_E08.b : CAGCTCCTGGTGGATTGTTTGGGTTTCCGATACAGACGCAAGCGTCAAAAGGCGGTGACC
CLNT1_0078_G01.b : CAGCTCCTGGTGGATTGTTTGGGTTTCCGATACAGACGCAAGCGTCAAAAGGCGGTGACC
CLNT1_0005_A07.b : CAGCTCCTGGTGGATTGTTTGGGTTTCCGATACAGACGCAAGCGTCAAAAGGCGGTGACC
CLNT1_0033_H06.b : CAGCTCCTGGTGGATTGTTTGGGTTTCCGATACAGACGCAAGCGTCAAAAGGCGGTGACC
CLNT1_0009_A03.b : CAGCTCCTGGTGGATTGTTTGGGTTTCCGATACAGACGCAAGCGTCAAAAGGCGGTGACC
ITT01_0030_B10.b : CAGCTCCTGGTGGATTGTTTGGGTTTCCGATACAGACGCAAGCGTCAAAAGGCGGTGACC


20110601C-004097 : GTCCCCCCTGGGACAGTCCTGGGCTATCGCCTAAAGCAGCTCGTCTTCCCCAACGAGGAG
                   ---------+---------+---------+---------+---------+---------+ 774
ITT01_0050_B09.b : GTCCCCCCTGGGACAGTCCTGGGCTATCGCCTAAAGCAGCTCGTCTTCCCCAACGAGGAG
ITT01_0077_E08.b : GTCCCCCCTGGGACAGTCCTGGGCTATCGCCTAAAGCAGCTCGTCTTCCCCAACGAGGAG
CLNT1_0078_G01.b : GTCCCCCCTGGGACAGTCCTGGGCTATCGCCTAAAGCAGCTCGTCTTCCCCCACGAGGAG
CLNT1_0005_A07.b : GTCCCCTCTGGGACAGTCCTGGGCTATCGCCTAAAGCAGCTCGTCTTCCCCAACGAGGAG
CLNT1_0033_H06.b : GTCCCCCCTGGGACAGTCCTGGGCTATCGCCTAAAGCAGCTCGTCTTCCCCAACGAGGAG
CLNT1_0009_A03.b : GTCCCCTCTGGGACAGTCCTGGGCTATCGCCTAAAGCAGCTCGTCTTCCCCAACGAGGAG
ITT01_0030_B10.b : GTCCCCCCTGGGACAGTCCTGGGCTATCGCCTAAAGCAGCTCGTCTTCCCCAACGAGGAG


20110601C-004097 : AGCATGAATATTATTTCTGAAAAAACAAAATCCTTTCCACACGAGAAAGATGGTGGTGCA
                   ---------+---------+---------+---------+---------+---------+ 834
ITT01_0050_B09.b : AGCATGAATATTATTTCTGAAAAAACAAAATCCTTTCCACACGAGAAAGATGGTGGTGCA
ITT01_0077_E08.b : AGCATGAATATTATTTCTGAAAAAACAAAATCCTTTTCACACGAGAAAGATGGTGGTGCA
CLNT1_0078_G01.b : AGCATGAATATTATTTCTGA*AAAACAAAATCCTTTC*ACACGAGAAAGATGGTGGTGCA
CLNT1_0005_A07.b : AGCATGAATATTATTTCTGAAAAAACAAAATCCTTTCCACACGAGAAAGATGGTGGTGCA
CLNT1_0033_H06.b : AGCATGAATACTATTTCTGAAAAAACAAAATCCTTTC*ACACGAGAAAGATGGTGGTGCA
CLNT1_0009_A03.b : AGCATGAATATTATTTCTGAAAAAACAAAATCCTTTCCACACGAGAAAGATGGTGGTGCA
ITT01_0030_B10.b : AGCATGAATATTATTTCTGAAAAAACAAAATCCTTTCCACACGAGAAAGATGGTGGTGCA


20110601C-004097 : TCTTGCTTAGGGAAGTCCTTGAGTTTGGAGGGTTCCAGAAGCATGAAGGAAAAGGTGCAG
                   ---------+---------+---------+---------+---------+---------+ 894
ITT01_0050_B09.b : TCTTGCTTANGGAAGTCCTTGAGTTTGGAGGNTNCAG*AAGCATGAANGAGAAGGTGCAN
ITT01_0077_E08.b : TCTTGCTTAGGGAAGTCCTTGAGTTTGGAGGGTTCCA*AANCATGAAGGAAAAG*TGCAG
CLNT1_0078_G01.b : TCTTGCTTAGGGAgtccctgagttttggagggtccagaagcatgaaggaaaaggtgcagg
CLNT1_0005_A07.b : TCTTGCTTAGGGAAGTCCTTGAGTTTGGAGGGTTCCAgaaccatgaaggagaaggtgcan
CLNT1_0033_H06.b : TCTTGCTTANGGAAGTCCTTGAGTTTGGNAGGTCCAG*AAGCATGAAGGAAGAAGTGCAG
CLNT1_0009_A03.b : TCTTGCTTAGGGAAGTCCTTGAGTTTGGAGGGTTCCAGAAGCATGAAGGAAGAGGTGCAG
ITT01_0030_B10.b : TCTTGCTTANGGAAGTCCTTGAGTTTGGAGGGGTCCAGAAGCATGAAGGAGAAGGTGCAG


20110601C-004097 : GACCTGGTGAGGGTCCTCCAGGATCTGACGGAGAAGGAGCAAAA................
                   ---------+---------+---------+---------+---------+---------+ 938
ITT01_0050_B09.b : GACCTGNTGAGGGTCCctcaggatctgacggagaaggagcaaaaatgggtgctgagctgc
ITT01_0077_E08.b : GACCTGGTGAGGGTCCTCCAGGATCTGACGGAGAAGAGCCAAAAtgggtgctgaactgcc
CLNT1_0078_G01.b : aactggtgaggtcctccaggatctgaaggagaagagcaaaatgggtgctgaactgcctca
CLNT1_0005_A07.b : gacctgntgagggttctccaagatcttgacgaaaaagagcaaaaatggtgctgagctgcc
CLNT1_0033_H06.b : GACCTGGTGAGGGTCCTCaggatctgaccgagaggagcaaaatgggtgctgagctgctca
CLNT1_0009_A03.b : GACCTGGTGAGGGTCCTCCAGGATCTGACGGAGAAGGAGCAAAAaatggtgctgagctgc
ITT01_0030_B10.b : GACCTGGTGAGGGTCCTCaggatctgacggagaggagcaaaaatgggtgctgagctgcct


20110601C-004097 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 938
ITT01_0050_B09.b : ctcactaagtgcctcactngagatgacagctccgggatctacagcaagagtgtctgaagt
ITT01_0077_E08.b : ccacctagtgcctcatgaagaatgacagctccggatctacaccaagatggctgaggtcaa
CLNT1_0078_G01.b : ctaatgctcactgaagatgaacgctcggaatctacgcaaaaatgtcggagtccagtggtc
CLNT1_0005_A07.b : tcactagtgcctcactgaggaagaacagctccggaatctacaacaagaatgcctgaagtc
CLNT1_0033_H06.b : ctaagtgctcactgaggatgacagctccgggattacagcaaagatgtctgaggtccgtgc
CLNT1_0009_A03.b : ctcactaagtgctcactgaagatggacagctccgggatctacagcaaagattgtctgagg
ITT01_0030_B10.b : cactaagtgcctcactgaagatgaacagctcccggatctacaacaaaaagtgtctgaggt


20110601C-004097 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 938
ITT01_0050_B09.b : cagtgctccngaagctacggatggaggcccancaaatctcttctaacagccttttacaca
ITT01_0077_E08.b : tgctccgaaactacgaatgaaggcccgcaaatctctcaaaacagcttttaaacagctgga
CLNT1_0078_G01.b : cgaaagctacgatgagggcccacaaatcttccaaacagccttttaaccatctggatctgg
CLNT1_0005_A07.b : aatgcttcgggaaactacggatgaagggcccacaaatcctcccaaaccaccttttaaccc
CLNT1_0033_H06.b : tccgaaagctacgaataagggcccacaaatccctataaacgccttttaaaccactgggat
CLNT1_0009_A03.b : tccagtgctccgaaaagctacggaggaaggcccgcaaacccctcataaacgcctttttac
ITT01_0030_B10.b : ccagtgctccggaaactacggatggagggccagcagatcctctcatagcagccttttaac


20110601C-004097 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 938
ITT01_0050_B09.b : gctgggatctggtaaagcccccgtggaaccttgtggaagtctggagcctggaagattgtc
ITT01_0077_E08.b : tctgggaaagcccccgggaaccctggggagtcctgaagcttgaagaattgcaagaacggc
CLNT1_0078_G01.b : gaaaggccgcgtgaacccggggaatcccgaaccctgaaggattctcaaaaaacnggtttg
CLNT1_0005_A07.b : agctgggatcttgtaaaagcccctggaaacctgtgggatgtctgaagccttgaaagattt
CLNT1_0033_H06.b : ttggtaaaggccccgggaaccccggggaatccggaaccctgaaagattcctaaaaagcgc
CLNT1_0009_A03.b : ccactgggatcttggtaaagccccgtggaaccccggggaattcctgaaaccttgaagaat
ITT01_0030_B10.b : ccacctggatcttggtaaagcccccgtggaacccctgtgggatgcccggatgctttgnag


20110601C-004097 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 938
ITT01_0050_B09.b : tgaagacgccgtttttgctgagcccaaaaaaagactgtcttgttgaggcgaaaggaacat
ITT01_0077_E08.b : ggttgggctaagcctaaaaaagaacttccctgtgaagcaaaagaacctccggacaaaccg
CLNT1_0078_G01.b : ggttagccctaaaaaaaaccgcccggtaaggggaaggagccaccgggacaacgggagaaa
CLNT1_0005_A07.b : ctgaagaacggttttgggctaagccctaaaaagaacctgcctgttgagggcgaaggaact
CLNT1_0033_H06.b : ttttgggtaaaccctaaaaaaggaccccccccgctaagggggaaaggatcttccgggaaa
CLNT1_0009_A03.b : ttgttaaaaaacgccgtttttggttaagccctaaaacagaacctgccccgtttagaggga
ITT01_0030_B10.b : gattgtctgaagaccgcggttggtgctaagccctaaaaaaaggaccctgccctgctgagg


20110601C-004097 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 938
ITT01_0050_B09.b : ccggacaaactggggaaaacgggtaaaggttaacccaggcaaatccgggccaaggtgttc
ITT01_0077_E08.b : ggaaaaatgggaaaagttttacccaaggcaacctgggcctcagggtttcctccgccccgg
CLNT1_0078_G01.b : tggggaaagcttccccccact                                      
CLNT1_0005_A07.b : tttcggaaaaaccggggaaacggggaaagggtttaaccgaggcaaaccggggccacaggg
CLNT1_0033_H06.b : aaccggggaaaaacgggtaaaaggttttcccaggaaaaattgggcccctcggggtttccc
CLNT1_0009_A03.b : taggatctttccgaacaaaactggggaaaactggttgaagggtttaaccaagaaaaactc
ITT01_0030_B10.b : ggcaaatgaatttatcccgaacaaacctggttaaaactgggtaaaagggttttaccccaa


20110601C-004097 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 938
ITT01_0050_B09.b : cccgcgcgcggaaccacccggttctaaccgggctttaagccccacccgggggtcccggtt
ITT01_0077_E08.b : aaacacctggttcaaacggaacctaacccccaacccggggtcccgcttcccccccctcaa
CLNT1_0078_G01.b :                                                             
CLNT1_0005_A07.b : tgtcccccgggcggggaaaaacacctttttttaccagggttttttaacc          
CLNT1_0033_H06.b : ctccgcacgggaaactccctcg                                     
CLNT1_0009_A03.b : ggggccctaggggtgtccccccgggccggggaaaccccttgtttttcacactgggttctt
ITT01_0030_B10.b : caacaacctctgggcccttaatgggtttccacctgccgcaaggggaacccaacttgggct


20110601C-004097 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 938
ITT01_0050_B09.b : cccccctccacaaaataaaacggggttgacctttaatacaaccggggct          
ITT01_0077_E08.b : aaaagttaaaccgggtttacccttattacaccgttggtcct                  
CLNT1_0078_G01.b :                                                             
CLNT1_0005_A07.b :                                                             
CLNT1_0033_H06.b :                                                             
CLNT1_0009_A03.b : taattccccaaccccgggggtgttcccccctccccccccc                   
ITT01_0030_B10.b : tccaaaaccggtactcttt