Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-004144

Sequence: [FASTA format sequence] GAGCGCATGC GCGGCAACCG GGATGGCCGG TGAGGATTGG AGGGCTGACG GCCGGGCGGA GCGCTGTGGA TTTGGTTTTA GGCGGGAATT GGAACTGCAG CGGCAGATGC CAGCAGGAGT CTAAGAAGTG CATATTTCCT ACCTTGGAGG AGACCATGGT GCGGCCTGCG AGGCATAAGA AGCCAGTCAA TTACTCCCAG TTTGAGAACT CTGACAGTGA TGATGATTTT GTTCCTGCAA CCGCACCGTT AAGTAAGAAA TCCAGAACAA CACAAAAGGA GTTAAAACTA GAAAAACCAG AACCAAAACT GAAGAACCTC CAGGAAAAAG ACATCCCACT ACAAGAGAAA ACCCCTAAAA AAAGGATGGC TTTAGATGAC AAGCTATACC AGAGAGACTT AGAAGTCGCA CTGGCTTTAT CAGTGAAGGA ACTTCCAACT GTCACCATTG ATGCGGAGGA CTGTCAAGAT AAAAGCACTG ATGAACATGG CAGTGGAAAC GCAGAAACGA CAGTTAAGTC TCCTCATATC TCCAACTGCA GCGTAGCCAG TGATTATTTA GATCTGGATA AGATCACCGA GGAAGGTGAT TCTCGAGGTG CTCGAGGGAG GAGAAAGGCA GCATCCCAAG CCACGGTCCA GCAGAGGAAG ATCCTCCTGG ACGGCCGTGA CGGCAACGGT GACGGCGACA GTGACTCCGA ACCAGACTTT GCAACAGGTG ACGATTCTGA GGATGATTCT GATTTTTGTG AGAGTGAGGA TGATGAAGCC CTCACTGTGA GAAAAAGCAA AGTTAAAGAA ATCAAAAAGC AAAAAGTGAA GGTGAAATCT CCAGTTGAAA AGAAAGAGAA GAAACCTAAA TCTAGACGTG CTGCTGTGGT GACTTCAGTA CACTCTGCTC CATCTGCCGT CCAGTCAGAA TCTCAGCCCT TGCCAAAAAA GGTTTCTGTT TCTTCAGAGG CCACTGAGAA GCCATTACAA ATATGCAGTC CTTCGGCTGA AA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
RAD51AP1 RAD51-associated protein 1 isoform b [Homo sapiens]. 243 2e-64 O

RAD51AP1 RAD51-associated protein 1 isoform a [Homo sapiens]. 232 4e-61 O

		Locus	Definition	Score	E value	FL
		RAD51AP1	RAD51-associated protein 1 isoform b [Homo sapiens].	243	2e-64	O
		RAD51AP1	RAD51-associated protein 1 isoform a [Homo sapiens].	232	4e-61	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Rad51ap1 RAD51-associated protein 1 [Mus musculus]. 142 5e-34 O

		Locus	Definition	Score	E value	FL
		Rad51ap1	RAD51-associated protein 1 [Mus musculus].	142	5e-34	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC611768 PREDICTED: similar to RAD51 associated protein 1 [Canis familiaris]. 241 1e-63 O

		Locus	Definition	Score	E value	FL
		LOC611768	PREDICTED: similar to RAD51 associated protein 1 [Canis familiaris].	241	1e-63	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
RAD51AP1 RAD51-associated protein 1 [Bos taurus]. 225 5e-59 O

LOC100336690 PREDICTED: RAD51 associated protein 1-like [Bos taurus]. 225 5e-59 O

		Locus	Definition	Score	E value	FL
		RAD51AP1	RAD51-associated protein 1 [Bos taurus].	225	5e-59	O
		LOC100336690	PREDICTED: RAD51 associated protein 1-like [Bos taurus].	225	5e-59	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
RAD51AP1 PREDICTED: RAD51-associated protein 1 isoform 1 [Sus scrofa]. 335 2e-92 O

RAD51AP1 PREDICTED: RAD51-associated protein 1 isoform 2 [Sus scrofa]. 322 2e-88 O

		Locus	Definition	Score	E value	FL
		RAD51AP1	PREDICTED: RAD51-associated protein 1 isoform 1 [Sus scrofa].	335	2e-92	O
		RAD51AP1	PREDICTED: RAD51-associated protein 1 isoform 2 [Sus scrofa].	322	2e-88	O

Assembly Members: 7 TOP

Library Plate Loc. Read Name Accession Full Seq.

BFLT1 0038 D09 BFLT1_0038_D09.b FS643097 AK390203
CBLT1 0087 B03 CBLT1_0087_B03.b HX218029
DCI01 0005 E07 DCI01_0005_E07.b DB790927
HTMT1 0054 B06 HTMT1_0054_B06.b FS668019
ITT01 0034 B03 ITT01_0034_B03.b BW979033
SPL01 0054 C11 SPL01_0054_C11.b CJ017869 AK237504
SPL01 0061 H02 SPL01_0061_H02.b CJ018542

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
512 A 5 0 0.714 W S ACA/T
G 2 0 0.286 ACG/T

Alignment: TOP

20110601C-004144 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
BFLT1_0038_D09.b :                    natccgtttgctgacgxxxxxxxxxxxxxxxxxxxxxxxxx
CBLT1_0087_B03.b :                                      ttttggacggtagaggxxxxxxx
SPL01_0061_H02.b :                                nttcacttgtgacttgacxxxxxxxxxxx
SPL01_0054_C11.b :                                 ttttggctaggactatgacxxxxxxxxx
HTMT1_0054_B06.b :                                                             
DCI01_0005_E07.b : nnnggtatctatagggctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0034_B03.b :                                                             


20110601C-004144 : ..............................GAGCGCATGCGCGGCAACCGGGATGGCCGG
                   ---------+---------+---------+---------+---------+---------+ 30
BFLT1_0038_D09.b : xxxxxxxxxxxxxxxxxxxxxxxcccttgaGAGCGCATGCGCGGCAACCGGGATGGCCGG
CBLT1_0087_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgATGCGCGGCAACCGGGATGGCCGG
SPL01_0061_H02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGGCCGG
SPL01_0054_C11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGGCCGG
HTMT1_0054_B06.b : ttttnggacgagaagaggccgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0005_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0034_B03.b :                                              nnnggatgaacxxxx


20110601C-004144 : TGAGGATTGGAGGGCTGACGGCCGGGCGGAGCGCTGTGGATTTGGTTTTAGGCGGGAATT
                   ---------+---------+---------+---------+---------+---------+ 90
BFLT1_0038_D09.b : TGAGGATTGGAGGGCTGACGGCCGGGCGGAGCGCTGTGGATTTGGTTTTAGGCGGGAATT
CBLT1_0087_B03.b : TGAGGATTGGAGGGCTGACGGCCGGGCGGAGCGCTGTGGATTTGGTTTTAGGCGGGAATT
SPL01_0061_H02.b : TGAGGATTGGAGGGCTGACGGCCGGGCGGAGCGCTGTGGATTTGGTTTTAGGCGGGAATT
SPL01_0054_C11.b : TGAGGATTGGAGGGCTGACGGCCGGGCGGAGCGCTGTGGATTTGGTTTTAGGCGGGAATT
HTMT1_0054_B06.b : gGAGGATTGGAGGGCTGACGGCCGGGCGGAGCGCTGTGGATTTGGTTTTAGGCGGGAATT
DCI01_0005_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATTTGGTTTTAGGCGGGAATT
ITT01_0034_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtttttTTTTAGGCGGGAATT


20110601C-004144 : GGAACTGCAGCGGCAGATGCCAGCAGGAGTCTAAGAAGTGCATATTTCCTACCTTGGAGG
                   ---------+---------+---------+---------+---------+---------+ 150
BFLT1_0038_D09.b : GGAACTGCAGCGGCAGATGCCAGCAGGAGTCTAAGAAGTGCATATTTCCTACCTTGGAGG
CBLT1_0087_B03.b : GGAACTGCAGCGGCAGATGCCAGCAGGAGTCTAAGAAGTGCATATTTCCTACCTTGGAGG
SPL01_0061_H02.b : GGAACTGCAGCGGCAGATGCCAGCAGGAGTCTAAGAAGTGCATATTTCCTACCTTGGAGG
SPL01_0054_C11.b : GGAACTGCAGCGGCAGATGCCAGCAGGAGTCTAAGAAGTGCATATTTCCTACCTTGGAGG
HTMT1_0054_B06.b : GGAACTGCAGCGGCAGATGCCAGCAGGAGTCTAAGAAGTGCATATTTCCTACCTTGGAGG
DCI01_0005_E07.b : GGAACTGCAGCGGCAGATGCCAGCAGGAGTCTAAGAAGTGCATATTTCCTACCTTGGAGG
ITT01_0034_B03.b : GGAACTGCAGCGGCAGATGCCAGCAGGAGTCTAAGAAGTGCATATTTCCTACCTTGGAGG


20110601C-004144 : AGACCATGGTGCGGCCTGCGAGGCATAAGAAGCCAGTCAATTACTCCCAGTTTGAGAACT
                   ---------+---------+---------+---------+---------+---------+ 210
BFLT1_0038_D09.b : AGACCATGGTGCGGCCTGCGAGGCATAAGAAGCCAGTCAATTACTCCCAGTTTGAGAACT
CBLT1_0087_B03.b : AGACCATGGTGCGGCCTGCGAGGCATAAGAAGCCAGTCAATTACTCCCAGTTTGAGAACT
SPL01_0061_H02.b : AGACCATGGTGCGGCCTGCGAGGCATAAGAAGCCAGTCAATTACTCCCAGTTTGAGAACT
SPL01_0054_C11.b : AGACCATGGTGCGGCCTGCGAGGCATAAGAAGCCAGTCAATTACTCCCAGTTTGAGAACT
HTMT1_0054_B06.b : AGACCATGGTGCGGCCTGCGAGGCATAAGAAGCCAGTCAATTACTCCCAGTTTGAGAACT
DCI01_0005_E07.b : AGACCATGGTGCGGCCTGCGAGGCATAAGAAGCCAGTCAATTACTCCCAGTTTGAGAACT
ITT01_0034_B03.b : AGACCATGGTGCGGCCTGCGAGGCATAAGAAGCCAGTCAATTACTCCCAGTTTGAGAACT


20110601C-004144 : CTGACAGTGATGATGATTTTGTTCCTGCAACCGCACCGTTAAGTAAGAAATCCAGAACAA
                   ---------+---------+---------+---------+---------+---------+ 270
BFLT1_0038_D09.b : CTGACAGTGATGATGATTTTGTTCCTGCAACCGCACCGTTAAGTAAGAAATCCAGAACAA
CBLT1_0087_B03.b : CTGACAGTGATGATGATTTTGTTCCTGCAACCGCACCGTTAAGTAAGAAATCCAGAACAA
SPL01_0061_H02.b : CTGACAGTGATGATGATTTTGTTCCTGCAACCGCACCGTTAAGTAAGAAATCCAGAACAA
SPL01_0054_C11.b : CTGACAGTGATGATGATTTTGTTCCTGCAACCGCACCGTTAAGTAAGAAATCCAGAACAA
HTMT1_0054_B06.b : CTGACAGTGATGATGATTTTGTTCCTGCAACCGCACCGTTAAGTAAGAAATCCAGAACAA
DCI01_0005_E07.b : CTGACAGTGATGATGATTTTGTTCCTGCAACCGCACCGTTAAGTGAGAAATCCAGAACAA
ITT01_0034_B03.b : CTGACAGTGATGATGATTTTGTTCCTGCAACCGCACCGTTAAGTAAGAAATCCAGAACAA


20110601C-004144 : CACAAAAGGAGTTAAAACTAGAAAAACCAGAACCAAAACTGAAGAACCTCCAGGAAAAAG
                   ---------+---------+---------+---------+---------+---------+ 330
BFLT1_0038_D09.b : CACAAAAGGAGTTAAAACTAGAAAAACCAGAACCAAAACTGAAGAACCTCCAGGAAAAAG
CBLT1_0087_B03.b : CACAAAAGGAGTTAAAACTAGAAAAACCAGAACCAAAACTGAAGAACCTCCAGGAAAAAG
SPL01_0061_H02.b : CACAAAAGGAGTTAAAACTAGAAAAACCAGAACCAAAACTGAAGAACCTCCAGGAAAAAG
SPL01_0054_C11.b : CACAAAAGGAGTTAAAACTAGAAAAACCAGAACCAAAACTGAAGAACCTCCAGGAAAAAG
HTMT1_0054_B06.b : CACAAAAGGAGTTAAAACTAGAAAAACCAGAACCAAAACTGAAGAACCTCCAGGAAAAAG
DCI01_0005_E07.b : CACAAAAGGAGTTAAAACTAGAAAAACCAGAACCAAAACTGAAGAACCTCCAGGAAAAAG
ITT01_0034_B03.b : CACAAAAGGAGTTAAAACTAGAAAAACCAGAACCAAAACTGAAGAACCTCCAGGAAAAAG


20110601C-004144 : ACATCCCACTACAAGAGAAAACCCCTAAAAAAAGGATGGCTTTAGATGACAAGCTATACC
                   ---------+---------+---------+---------+---------+---------+ 390
BFLT1_0038_D09.b : ACATCCCACTACAAGAGAAAACCCCTAAAAAAAGGATGGCTTTAGATGACAAGCTATACC
CBLT1_0087_B03.b : ACATCCCACTACAAGAGAAAACCCCTAAAAAAAGGATGGCTTTAGATGACAAGCTATACC
SPL01_0061_H02.b : ACATCCCACTACAAGAGAAAACCCCTAAAAAGAGGATGGCTCTAGATGACAAGCTATACC
SPL01_0054_C11.b : ACATCCCACTACAAGAGAAAACCCCTAAAAAAAGGATGGCTTTAGATGACAAGCTATACC
HTMT1_0054_B06.b : ACATCCCACTACAAGAGAAAACCCCTAAAAAAAGGATGGCTTTAGATGACAAGCTATACC
DCI01_0005_E07.b : ACATCCCACTACAAGAGAAAACCCCTAAAAAAAGGATGGCTTTAGATGACAAGCTATACC
ITT01_0034_B03.b : ACATCCCACTACAAGAGAAAACCCCTAAAAAAAGGATGGCTTTAGATGACAAGCTATACC


20110601C-004144 : AGAGAGACTTAGAAGTCGCACTGGCTTTATCAGTGAAGGAACTTCCAACTGTCACCATTG
                   ---------+---------+---------+---------+---------+---------+ 450
BFLT1_0038_D09.b : AGAGAGACTTAGAAGTCGCACTGGCTTTATCAGTGAAGGAACTTCCAACTGTCACCATTG
CBLT1_0087_B03.b : AGAGAGACTTAGAAGTCGCACTGGCTTTATCAGTGAAGGAACTTCCAACTGTCACCATTG
SPL01_0061_H02.b : AGAGAGACTTAGAAGTCGCACTGGCTTTATCAGTGAAGGAACTTCCAACTGTCACCATTG
SPL01_0054_C11.b : AGAGAGACTTAGAAGTCGCACTGGCTTTATCAGTGAAGGAACTTCCAACTGTCACCATTG
HTMT1_0054_B06.b : AGAGAGACTTAGAAGTCGCACTGGCTTTATCAGTGAAGGAACTTCCAACTGTCACCATTG
DCI01_0005_E07.b : AGAGAGACTTAGAAGTCGCACTGGCTTTATCAGTGAAGGAACTTCCAACTGTCACCATTG
ITT01_0034_B03.b : AGAGAGACTTAGAAGTCGCACTGGCTTTATCAGTGAAGGAACTTCCAACTGTCACCATTG


20110601C-004144 : ATGCGGAGGACTGTCAAGATAAAAGCACTGATGAACATGGCAGTGGAAACGCAGAAACGA
                   ---------+---------+---------+---------+---------+---------+ 510
BFLT1_0038_D09.b : ATGCGGAGGACTGTCAAGATAAAAGCACTGATGAACATGGCAGTGGAAACGCAGAAACGA
CBLT1_0087_B03.b : ATGCGGAGGACTGTCAAGATAAAAGCACTGATGAACATGGCAGTGGAAACGCAGAAACGA
SPL01_0061_H02.b : ATGCGGAGGACTGTCAAGATAAAAGCACTGATGAACATGGCAGTGGAAACGCAGAAACGA
SPL01_0054_C11.b : ATGCGGAGGACTGTCAAGATAAAAGCACTGATGAACATGGCGGTGGAAACGCAGAAACGA
HTMT1_0054_B06.b : ATGCGGAGGACTGTCAAGATAAAAGCACTGATGAACATGGCAGTGGAAACGCAGAAACGA
DCI01_0005_E07.b : ATGCGGAGGACTGTCAAGATAAAAGCACTGATGAACATGGCAGTGGAAACGCAGAAACGA
ITT01_0034_B03.b : ATGCGGAGGACTGTCAAGATAAAAGCACTGATGAACATGGCAGTGGAAACGCAGAAACGA


20110601C-004144 : CAGTTAAGTCTCCTCATATCTCCAACTGCAGCGTAGCCAGTGATTATTTAGATCTGGATA
                   ---------+---------+---------+---------+---------+---------+ 570
BFLT1_0038_D09.b : CAGTTAAGTCTCCTCATATCTCCAACTGCAGCGTAGCCAGTGATTATTTAGATCTGGATA
CBLT1_0087_B03.b : CAGTTAAGTCTCCTCATATCTCCAACTGCAGCGTAGCCAGTGATTATTTAGATCTGGATA
SPL01_0061_H02.b : CGGTTAAGTCTCCTCATATCTCCAACTGCAGCGTAGCCAGTGATTATTTAGATCTGGATA
SPL01_0054_C11.b : CGGTTAAGTCTCCTCATATCTCCAACTGCAGCGTAGCCAGTGATTATTTAGATCTGGATA
HTMT1_0054_B06.b : CAGTTAAGTCTCCTCATATCTCCAACTGCAGCGTAGCCAGTGATTATTTAGATCTGGATA
DCI01_0005_E07.b : CAGTTAAGTCTCCTCATATCTCCAACTGCAGCGTAGCCAGTGATTATTTAGATCTGGATA
ITT01_0034_B03.b : CAGTTAAGTCTCCTCATATCTCCAACTGCAGCGTAGCCAGTGATTATTTAGATCTGGATA


20110601C-004144 : AGATCACCGAGGAAGGTGATTCTCGAGGTGCTCGAGGGAGGAGAAAGGCAGCATCCCAAG
                   ---------+---------+---------+---------+---------+---------+ 630
BFLT1_0038_D09.b : AGATCACCGAGGAAGGTGATTCTCGAGGTGCTCGAGGGAGGAGAAAGGCAGCATCCCAAG
CBLT1_0087_B03.b : AGATCACCGAGGAAGGTGATTCTCGAGGTGCTCGAGGGAGGAGAAAGGCAGCATCCCAAG
SPL01_0061_H02.b : AGATCACCGAGGAAGGTGATTCTCGAGGTGCTCGGGGGAGGAGAAAGGCAGCATCCCAAG
SPL01_0054_C11.b : AGATCACCGAGGAAGGTGATTCTCGAGGTGCTCGAGGGAGGAGAAAGGCAGCATCCCAAG
HTMT1_0054_B06.b : AGATCACCGAGGAAGGTGATTCTCGAGGTGCTCGAGGGAGGAGAAAGGCAGCATCCCAAG
DCI01_0005_E07.b : AGATCACCGAGGAAGGTGATTCTCGAGGTGCTCGAGGGAGGAGAAAGGCAGCATCCCAAG
ITT01_0034_B03.b : AGATCACCGAGGAAGGTGATTCTCGAGGTGCTCGAGGGAGGAGAAAGGCAGCATCCCAAG


20110601C-004144 : CCACGGTCCAGCAGAGGAAGATCCTCCTGGACGGCCGTGACGGCAACGGTGACGGCGACA
                   ---------+---------+---------+---------+---------+---------+ 690
BFLT1_0038_D09.b : CCACGGTCCAGCAGAGGAAGATCCTCCTGGACGGCCGTGACGGCAACGGTGACGGCGACA
CBLT1_0087_B03.b : CCACGGTCCAGCAGAGGAAGATCCTCCTGGACGGCCGTGACGGCAACGGTGACGGCGACA
SPL01_0061_H02.b : CCACGGTCCAGCAGAGGAAGATCCTCCTGGACGGCAGTGATGGCAACGGTGATGGTGACA
SPL01_0054_C11.b : CCACGGTCCAGCAGAGGAAGATCCTCCTGGACGGCAGTGATGGCAACGGTGATGGTGACA
HTMT1_0054_B06.b : CCACGGTCCAGCAGAGGAAGATCCTCCTGGACGGCCGTGACGGCAACGGTGACGGCGACA
DCI01_0005_E07.b : CCACGGTCCAGCAGAGGAAGATCCTCCTGGACGGCCGTGACGGCAACGGTGACGGCGACA
ITT01_0034_B03.b : CCACGGTCCAGCAGAGGAAGATCCTCCTGGACGGCCGTGACGGCAACGGTGACGGCGACA


20110601C-004144 : GTGACTCCGAACCAGACTTTGCAACAGGTGACGATTCTGAGGATGATTCTGATTTTTGTG
                   ---------+---------+---------+---------+---------+---------+ 750
BFLT1_0038_D09.b : GTGACTCCGAACCAGACTTTGCAACAGGTGACGATTCTGAGGATGATTCTGATTTTTGTG
CBLT1_0087_B03.b : GTGACTCCGAACCAGACTTTGCAACAGGTGACGATTCTGAGGATGATTCTGATTTTTGTG
SPL01_0061_H02.b : GTGACTCCGAACCAGACTTTGCAACAGGTGACGATTCTGAGGATGATTCTGATTTTTGTG
SPL01_0054_C11.b : GTGACTCCGAACCAGACTTTGCAACAGGTGACGATTCTGAGGATGATTCTGATTTTTGTG
HTMT1_0054_B06.b : GTGACTCCGAACCAGACTTTGCAACAGGTGACGATTCTGAGGATGATTCTGATTTTTGTG
DCI01_0005_E07.b : GTGACTCCGAACCAGACTTTGNCACAGGTGACGATTCTGAGGATGATTCTGATTTTTGTG
ITT01_0034_B03.b : GTGACTCCGAACCAGACTTTGCAACAGGTGACGATTCTGAGGATGATTCTGATTTTTGTG


20110601C-004144 : AGAGTGAGGATGATGAAGCCCTCACTGTGAGAAAAAGCAAAGTTAAAGAAATCAAAAAGC
                   ---------+---------+---------+---------+---------+---------+ 810
BFLT1_0038_D09.b : AGAGTGAGGATGATGAAGCCCTCACTGTGAGAAAAAGCAAAGTTTAAGAAATCAAAAAGC
CBLT1_0087_B03.b : AGAGTGAGGATGATGAAGCCCTCACTGTGAGAAAAAGCAAAGTTAANGAAATCAAAAAGC
SPL01_0061_H02.b : AGAGTGAGGATGATGAAGCCCTCACTGTGAGAAAAGCAAAAGTTAAAGAAATCAAAAAGC
SPL01_0054_C11.b : AGAGTGAGGATGATGAAGCCCTCACTGTGAGAAAAAGCAAAGTTAAAGAAATCAAAAAGC
HTMT1_0054_B06.b : AGAGTGAGGATGATGAAGCCCTCACTGTGAGAAAAAGCAAAGTTAAAGAAATCAAAAAGC
DCI01_0005_E07.b : AGAGTGAGGATGATGAAGCCCTCACTGTGAGA*AAAGCAAAGTTAAAGAAATCAAAAAGC
ITT01_0034_B03.b : AGAGTGAGGATGATGAAGCCCTCACTGTGAGAAAAAGCAAAGTTAAAGAAATCAAAAAGC


20110601C-004144 : AAAAAGTGAAGGTGAAATCTCCAGTTGAAAAGAAAGAGAAGAAACCTAAATCTAGACGTG
                   ---------+---------+---------+---------+---------+---------+ 870
BFLT1_0038_D09.b : AAAAAGTGAAAGTGAAATCTTCAGTTGAAAAGAAAGAGAAGAAACCTAATTCTAGACGTG
CBLT1_0087_B03.b : AAAAAGTGAAGGTGAAATCTCCAGTTGAAAAAGAAGAGAAGAAACCTAAATCTAGACGTG
SPL01_0061_H02.b : AAAAAGTGAAGGgtgaaatctccagtttgaaagaaaagagaagaaaacttaatcctaaac
SPL01_0054_C11.b : AAAAAGTGAAGGTGAAATCCCCCGTTTGAAAAAAAGA*AAGAAACCTAATTCTAGACCTG
HTMT1_0054_B06.b : AAAAAGTGAAGGTGAAATCTCCAGTTGAAAAGAAAGAGAAGAAAC*TAAATCTAGACGTG
DCI01_0005_E07.b : AAAAAGTGAAGGTGAAATCTCCAGTTTGAAAGAA*GAGAAGCNACCTAAATCTAGACGTG
ITT01_0034_B03.b : AAAAAGTGAAGGTGAAATCTCCAGTTGAAAAGAAAGAGAAGAAACCTAAATCTAGACGTG


20110601C-004144 : CTGCTGTGGTGACTTCAGTACACTCTGCTCCATCTGCCGTCCAGTCAGAATCTCAGCCCT
                   ---------+---------+---------+---------+---------+---------+ 930
BFLT1_0038_D09.b : CTGCTGTGGTGACTTCAGacactctgcctcatctggcgtcaagtcaaaatctccaccctt
CBLT1_0087_B03.b : CTGCTGTGGTGACTTCAGTACACTCTGCTCCATCTGCCGTCcagttagaatctcagcccc
SPL01_0061_H02.b : ctgcctgctggtggggaatttcaggtacattccggctccatctggccgttcaagttaaaa
SPL01_0054_C11.b : CTGCTGGGGTGACTTCAGTAAACTCTGCTtccatcgccgctcaggtcaaatctcacccct
HTMT1_0054_B06.b : CTGCTGTGGTGACTTCAGTACACTCTGCTCCATCTGCCGTCAAGTCAGAATCTCAGCCCT
DCI01_0005_E07.b : CTGCTGTGGTGACTTCAGTACACTCTGCTCCATCTGCCGTCAAGTCAGAATCTCAGCCCT
ITT01_0034_B03.b : CTGCTGTGGTGACTTCAGTACACTCTGCTCCATCTGCCCGTCAGTCAGAATCTCAGCCCT


20110601C-004144 : TGCCAAAAAAGGTTTCTGTTTCTTCAGAGGCCACTGAGAAGCCATTACAAATATGCAGTC
                   ---------+---------+---------+---------+---------+---------+ 990
BFLT1_0038_D09.b : gccaaaaaggtttctgttttctcgaggcccctgaaaaccatttcaaatagcaatccttcg
CBLT1_0087_B03.b : ttgccaaaaaaggttctggtccctcagaggccactgagaagccaatacaattatgcagtc
SPL01_0061_H02.b : ttctccaacccctttgccaaaaaaagggtttccggttttcttcccaaaggcccccttgga
SPL01_0054_C11.b : tggccaaaaaggttccggtttcttcaaagcccctgaaaaacctttacaatatgcagtcct
HTMT1_0054_B06.b : TGCCAAAAAAGGTTTCTGTTTCTTCAGA*GCCACTGAGAAGCCATTACAAATATGCAGTC
DCI01_0005_E07.b : TGCCAAAAAggtttctggttcntcagaggcactgagaaagcatttacaatatgcagtcct
ITT01_0034_B03.b : TGCCAAAAAAGGTTTCTGTTTCTTCAGAGGCCACTGAGAAGCCATTACAAATATGCAGTC


20110601C-004144 : CTTCGGCTGAAA................................................
                   ---------+---------+---------+---------+---------+---------+ 1002
BFLT1_0038_D09.b : cctgaaagccggaacctaatgggttcccccaacccctcgggaattgtcaccccccccccc
CBLT1_0087_B03.b : cttcggctgaaagcagagacctaattgggtccccacaccacatccggaaatgccacccca
SPL01_0061_H02.b : aaaacccccttttccaaaattttgccaggtccccttcgggcctgaaaaaacagc     
SPL01_0054_C11.b : ttcgcttaaaaccggaaaaccaagtgggttccccccccctcgggaaggtggcact    
HTMT1_0054_B06.b : CTTCGGCTGAAAgcaagagacctagtgggtccaaccancagcatcggggagtggcancaa
DCI01_0005_E07.b : tccgctgaaagcaggagaacttagtgggtcccaccagccatcggaagtggcacancggcc
ITT01_0034_B03.b : CCTCGGCTGAAAgcaggagaccctagtgggtccaccagcatcgggaagtggcagcancan


20110601C-004144 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1002
BFLT1_0038_D09.b : cctggaggagggcgggaaatccccagtcaaaaccccccctggtttgtcaaattacccaat
CBLT1_0087_B03.b : ccccccgctggcaggaggggtgttaaatcccagtcaaacctccccttgggttgccaatta
SPL01_0061_H02.b :                                                             
SPL01_0054_C11.b :                                                             
HTMT1_0054_B06.b : cnccgcccgctggcaggatgctgtgaaatctcaagtcagaactcccgcttgcttgttcag
DCI01_0005_E07.b : gcccgctgccaggatggctgtgaatctccagtcagagctccgcctgggctgttcagatac
ITT01_0034_B03.b : ccgcccgctggcaagagtggctgtgaagtctccagtcagagctccgccttggctgtcaga


20110601C-004144 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1002
BFLT1_0038_D09.b : aaaccttttatcccccccccataatttgggtacaacaagaagtgttaaaaaagaactttt
CBLT1_0087_B03.b : ccaagtaaccttttctccccccccctttaatttgtgaacaccggcaagttaataaaagat
SPL01_0061_H02.b :                                                             
SPL01_0054_C11.b :                                                             
HTMT1_0054_B06.b : attacacgaattaactttgcatccagcccccctaaatttgggaacaacaagcaatgttga
DCI01_0005_E07.b : ccnaattaaccttgcatccacccccctattatggtggtaccccacgaagtgttaataaag
ITT01_0034_B03.b : ttagccgagttaaccttgcatccancgcgctagtattgtggtgtacacaagcatgttgat


20110601C-004144 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1002
BFLT1_0038_D09.b : tttaaccctgtttttttggagaggtttgagaaaaaaacctttgcgcaaaatcctccccct
CBLT1_0087_B03.b : ttgttttaacccttttttttgggggggattgaataaaaaaaccttggcaaaaaatcccac
SPL01_0061_H02.b :                                                             
SPL01_0054_C11.b :                                                             
HTMT1_0054_B06.b : ttaaagaatttgtttaaacccgttaatttgaggggggttggaaaaaaaaaccttggcgta
DCI01_0005_E07.b : atcttgttttagcctgttatttaagaggttgtaaaaaaaaccttggccaaatatcctcct
ITT01_0034_B03.b : taaagatcttgtttatagctgtttaattgagaggtatgaaataaagaatccttgncaaaa


20110601C-004144 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1002
BFLT1_0038_D09.b : gttggatatttctcaaaaggtcccaatccttagagtttgtttttcttaagaaccttccct
CBLT1_0087_B03.b : cactttggaatattccaaaacgtttaaatcttgaaattgggtctctcgaaaacaacccct
SPL01_0061_H02.b :                                                             
SPL01_0054_C11.b :                                                             
HTMT1_0054_B06.b : aaatatcccccctttggaaaattcggaaaggtttcaaccttaaagtgggtttctcgaaac
DCI01_0005_E07.b : ttggaaattctcaagagttaatacctagagtgttctctaaaacatcccctctgataaatt
ITT01_0034_B03.b : atacctcaccattggatactcccgaaccgttcaaatccttagaatgcgttcttgaaacct


20110601C-004144 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1002
BFLT1_0038_D09.b : tctgtgaaaaccagtccacgggg                                    
CBLT1_0087_B03.b : ttggtataaaatctcccggggcgcttagagaaagaacacaacctctttttgggaggtttt
SPL01_0061_H02.b :                                                             
SPL01_0054_C11.b :                                                             
HTMT1_0054_B06.b : cttctccttttgtataatttgccgaggggctttaaggaaacccacacactctttcggggg
DCI01_0005_E07.b : gcgcgggggttaaaggaggcaaccgcctttcggggttttgtgtttacaagttgttttctc
ITT01_0034_B03.b : accccttcgtgataaacttgcacggctgctttacgggagacctccaccgctttctgaggg


20110601C-004144 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1002
BFLT1_0038_D09.b :                                                             
CBLT1_0087_B03.b : cttgtttttttaaacattttttttcttctaaaatatat                     
SPL01_0061_H02.b :                                                             
SPL01_0054_C11.b :                                                             
HTMT1_0054_B06.b : ttttctcttgtttaaaccattgtgtttctcccgaaaa                      
DCI01_0005_E07.b : ccacaaa                                                    
ITT01_0034_B03.b : gttttattttgttaaccgaatgttgattccttccgaaataaaaaaataccttt