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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-004230

Length: 1,399

Sequence [FASTA format sequence]
TTTTTTGTGT TCCCAGCTGC CGGGAAAAGC CGCCGGGAAT TCTTTACCTG GCCGTCCCCT
ACCTCTAGAC GACCCGAAGC CCCTTCGGAA AGCTGTGCGG GGAGGCGTAG CGACCGGGGC
TGGCCTTTCG GAAGCGGGTC TGAGGCACAT TGCGGTTTGG CCGAGGGAAT CAAGACGGGA
GAGACGCGTT TGTCCGCGAG GGAGGCAGGC CCCGTCCGGG GATCTTAGAA ACCCTGCGGT
CCATCATGAA GTTCCAGTAT AAGGAGGACC ATCCCTTTGA GTATCGGAAA AAGGAAGGAG
AAAAGATCCG GAAGAAATAT CCGGACCGGG TCCCCGTGAT CGTGGAGAAG GCTCCTAAGG
CCAGGGTACC TGATCTGGAC AAGAGGAAGT ACCTCGTGCC CTCTGACCTC ACTGTTGGCC
AGTTCTACTT CTTAATCCGG AAGAGGATCC ACCTGAGACC TGAGGACGCC TTATTCTTCT
TTGTCAACAA CACCATCCCT CCCACTAGCG CGACCATGGG CCAGCTGTAT GAGGACAACC
ACGAGGAAGA CTACTTTCTG TACGTGGCCT ACAGCGACGA GAGTGTCTAC GGGGAGTGAG
TGGTGGAAGC CGGCAGATGG GAGCTCCTGG ACTCGGGGCA GGGGGAGGGG CGTGGGGCGA
GAGAGGGAGG GCTCCCCCGT GGAGGACGAC AGAGGAAAAA ACATCTGGAA ACACGACCTT
GCACACACCA TCACCACATT TCCACACACT CAACTGATAT TTTTTTGCTG CCTTCTCGGC
CCAGGGAGAA AGCACGTCAG GACAGAGCTG GCAGATTGGC TTTGGTAGAA AAATGAGGAT
GCCCTCTAAT CTCACAACAC TACCACGTAT TAACTTTCGT GTGATTTCCA TAGAAGAGGC
AGGAGGTGGG CAGGCTGGGG CCAGGGATCG TGGACCACCG GTAACTTCCT GCTCTTCTTC
TCTTGGGGCA GAGATTCTGT TTTTTGACAT TTGCACAAGA CAGGTAGGGA AAGGGGAGGG
AATGTTTGAG GACTGCTGGT AGTGGACCAT TGCTGGGGAC CAAAAGAGAC CTATTGTGAT
GAAAGCCTTG TGACCCCCGA CCTCTCCTAT CTCCACCCCT CCTCCCGAAT CCCACCTGTC
ATCTCTCAAG CATCATGGTA CCCACCCCAG TGGCGACAGT GGACCCCAGA CCCAGACACT
TAGATGGAGC TCTCCTACGG CTGGAAAATG ATAGGGGCCG GGCGTGAAGG ATATTAGGAT
TATGAAGACA GTCTCGATAG CATTAAACTG GAATTGACCC AGCACTGAGC ATCCCTGTCT
AACCTGCTTT GCTCTTTGGT GCCTCTTTTC GCACCCCACC TTGGACTTGA ATGCGCCTCA
GCCATTTCCA GTTATAGGC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGABARAPL1gamma-aminobutyric acid receptor-associated protein-like 1 [Homo sapiens]. 2432e-64O
Contig/Assembly ProteinGABARAPgamma-aminobutyric acid receptor-associated protein [Homo sapiens]. 2165e-56O
Contig/Assembly ProteinGABARAPL2gamma-aminobutyric acid receptor-associated protein-like 2 [Homo sapiens]. 1481e-35O
Contig/Assembly ProteinMAP1LC3Cmicrotubule-associated proteins 1A/1B light chain 3C [Homo sapiens]. 92.49e-19O
Contig/Assembly ProteinMAP1LC3Amicrotubule-associated proteins 1A/1B light chain 3A isoform a [Homo sapiens]. 80.93e-15O
Contig/Assembly ProteinMAP1LC3Bmicrotubule-associated proteins 1A/1B light chain 3B [Homo sapiens]. 77.82e-14O
Contig/Assembly ProteinMAP1LC3Amicrotubule-associated proteins 1A/1B light chain 3A isoform b [Homo sapiens]. 77.43e-14O
Contig/Assembly ProteinMAP1LC3B2microtubule-associated proteins 1A/1B light chain 3 beta 2 precursor [Homo sapiens]. 74.32e-13O
Contig/Assembly ProteinLOC392288PREDICTED: microtubule-associated proteins 1A/1B light chain 3B-like [Homo sapiens]. 63.26e-10O
Contig/Assembly ProteinLOC392288PREDICTED: microtubule-associated proteins 1A/1B light chain 3B-like [Homo sapiens]. 63.26e-10O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGabarapl1gamma-aminobutyric acid receptor-associated protein-like 1 [Mus musculus]. 2432e-64O
Contig/Assembly ProteinGabarapgamma-aminobutyric acid receptor-associated protein [Mus musculus]. 2164e-56O
Contig/Assembly ProteinGm3724PREDICTED: gamma-aminobutyric acid receptor-associated protein-like 2-like [Mus musculus]. 1495e-36O
Contig/Assembly ProteinGabarapl2gamma-aminobutyric acid receptor-associated protein-like 2 [Mus musculus]. 1481e-35O
Contig/Assembly ProteinMap1lc3amicrotubule-associated proteins 1A/1B light chain 3A [Mus musculus]. 80.92e-15O
Contig/Assembly ProteinMap1lc3bmicrotubule-associated proteins 1A/1B light chain 3B [Mus musculus]. 78.21e-14O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC612919PREDICTED: similar to gamma-aminobutyric acid (GABA(A)) receptor-associated protein-like 1 isoform 1 [Canis familiaris]. 2432e-64O
Contig/Assembly ProteinLOC479479PREDICTED: similar to gamma-aminobutyric acid receptor associated protein isoform 1 [Canis familiaris]. 2165e-56O
Contig/Assembly ProteinLOC479479PREDICTED: similar to gamma-aminobutyric acid receptor associated protein isoform 2 [Canis familiaris]. 1781e-44O
Contig/Assembly ProteinLOC479646PREDICTED: similar to GABA(A) receptor-associated protein like 2 [Canis familiaris]. 1481e-35O
Contig/Assembly ProteinLOC611659PREDICTED: similar to microtubule-associated protein 1 light chain 3 gamma [Canis familiaris]. 87.43e-17O
Contig/Assembly ProteinLOC477201PREDICTED: similar to microtubule-associated protein 1 light chain 3 alpha isoform 2 [Canis familiaris]. 79.76e-15O
Contig/Assembly ProteinLOC477201PREDICTED: similar to microtubule-associated protein 1 light chain 3 alpha isoform 1 [Canis familiaris]. 79.76e-15O
Contig/Assembly ProteinLOC479619PREDICTED: similar to microtubule-associated proteins 1A/1B light chain 3 [Canis familiaris]. 77.82e-14O
Contig/Assembly ProteinLOC612919PREDICTED: similar to gamma-aminobutyric acid (GABA(A)) receptor-associated protein-like 1 isoform 2 [Canis familiaris]. 60.15e-09O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGABARAPL1gamma-aminobutyric acid receptor-associated protein-like 1 [Bos taurus]. 2432e-64O
Contig/Assembly ProteinGABARAPgamma-aminobutyric acid receptor-associated protein [Bos taurus]. 2165e-56O
Contig/Assembly ProteinGABARAPL2gamma-aminobutyric acid receptor-associated protein-like 2 [Bos taurus]. 1481e-35O
Contig/Assembly ProteinMAP1LC3Cmicrotubule-associated proteins 1A/1B light chain 3C [Bos taurus]. 874e-17O
Contig/Assembly ProteinMAP1LC3Amicrotubule-associated proteins 1A/1B light chain 3A [Bos taurus]. 81.61e-15O
Contig/Assembly ProteinMAP1LC3Bmicrotubule-associated proteins 1A/1B light chain 3B [Bos taurus]. 76.65e-14O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100518837PREDICTED: gamma-aminobutyric acid receptor-associated protein-like 1-like isoform 1 [Sus scrofa]. 2455e-65O
Contig/Assembly ProteinGABARAPL1gamma-aminobutyric acid receptor-associated protein-like 1 [Sus scrofa]. 2431e-64O
Contig/Assembly ProteinLOC100518837PREDICTED: gamma-aminobutyric acid receptor-associated protein-like 1-like [Sus scrofa]. 2224e-58O
Contig/Assembly ProteinLOC100624395PREDICTED: gamma-aminobutyric acid receptor-associated protein-like [Sus scrofa]. 2163e-56O
Contig/Assembly ProteinGABARAPgamma-aminobutyric acid receptor-associated protein [Sus scrofa]. 2163e-56O
Contig/Assembly ProteinLOC100521968PREDICTED: gamma-aminobutyric acid receptor-associated protein-like 2-like [Sus scrofa]. 1488e-36O
Contig/Assembly ProteinLOC100512852PREDICTED: microtubule-associated proteins 1A/1B light chain 3C-like [Sus scrofa]. 88.21e-17O
Contig/Assembly ProteinMAP1LC3Amicrotubule-associated proteins 1A/1B light chain 3A [Sus scrofa]. 82.84e-16O
Contig/Assembly ProteinMAP1LC3Bmicrotubule-associated proteins 1A/1B light chain 3B [Sus scrofa]. 76.63e-14O


Assembly Members: 5      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
HTMT10146B01HTMT1_0146_B01.bHX226276 
LVR010093B12LVR01_0093_B12.bBW962757 AK345988
LVR010101B12LVR01_0101_B12.bBP442775 AK232622
SMG010032F11SMG01_0032_F11.bFS716108 
THY010062E07THY01_0062_E07.bBP165006 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
584C200.500WSAGC/S
T200.500AGT/S


Alignment:      TOP

20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVR01_0093_B12.b : gcaataggggccnxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0062_E07.b : tttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0101_B12.b : ccaggcattngtgacntatagacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SMG01_0032_F11.b : nnnnnnnnnnnnnnnnn
HTMT1_0146_B01.b :
20110601C-004230 : ..........................TTTTTTGTGTTCCCAGCTGCCGGGAAAAGCCGCC
---------+---------+---------+---------+---------+---------+ 34
LVR01_0093_B12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxTTTTTTGTGTTCCCAGCTGCCGGGAAAAGCCGCC
THY01_0062_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxttGTGTTCCCAGCTGCCGGGAAAAGCCGCC
LVR01_0101_B12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxgtttttGTGTTCCCAGCTGCCGGGAAAAGCCGCC
SMG01_0032_F11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxGCCGCC
HTMT1_0146_B01.b :
20110601C-004230 : GGGAATTCTTTACCTGGCCGTCCCCTACCTCTAGACGACCCGAAGCCCCTTCGGAAAGCT
---------+---------+---------+---------+---------+---------+ 94
LVR01_0093_B12.b : GGGAATTCTTTACCTGGCCGTCCCCTACCTCTAGACGACCCGAAGCCCCTTCGGAAAGCT
THY01_0062_E07.b : GGGAATTCTTTACCTGGCCGTCCCCTACCTCTAGACGACCCGAAGCCCCTTCGGAAAGCT
LVR01_0101_B12.b : GGGAATTCTTTACCTGGCCGTCCCCTACCTCTAGACGACCCGAAGCCCCTTCGGAAAGCT
SMG01_0032_F11.b : GGGAATTCTTTACCTGGCCGTCCCCTACCTCTAGACGACCCGAAGCCCCTTCGGAAAGCT
HTMT1_0146_B01.b :
20110601C-004230 : GTGCGGGGAGGCGTAGCGACCGGGGCTGGCCTTTCGGAAGCGGGTCTGAGGCACATTGCG
---------+---------+---------+---------+---------+---------+ 154
LVR01_0093_B12.b : GTGCGGGGAGGCGTAGCGACCGGGGCTGGCCTTTCGGAAGCGGGTCTGAGGCACATTGCG
THY01_0062_E07.b : GTGCGGGGAGGCGTAGCGACCGGGGCTGGCCTTTCGGAAGCGGGTCTGAGGCACATTGCG
LVR01_0101_B12.b : GTGCGGGGAGGCGTAGCGACCGGGGCTGGCCTTTCGGAAGCGGGTCTGAGGCACATTGCG
SMG01_0032_F11.b : GTGCGGGGAGGCGTAGCGACCGGGGCTGGCCTTTCGGAAGCGGGTCTGAGGCACATTGCG
HTMT1_0146_B01.b :
20110601C-004230 : GTTTGGCCGAGGGAATCAAGACGGGAGAGACGCGTTTGTCCGCGAGGGAGGCAGGCCCCG
---------+---------+---------+---------+---------+---------+ 214
LVR01_0093_B12.b : GTTTGGCCGAGGGAATCAAGACGGGAGAGACGCGTTTGTCCGCGAGGGAGGCAGGCCCCG
THY01_0062_E07.b : GTTTGGCCGAGGGAATCAAGACGGGAGAGACGCGTTTGTCCGCGAGGGAGGCAGGCCCCG
LVR01_0101_B12.b : GTTTGGCCGAGGGAATCAAGACGGGAGAGACGCGTTTGTCCGCGAGGGAGGCAGGCCCCG
SMG01_0032_F11.b : GTTTGGCCGAGGGAATCAAGACGGGAGAGACGCGTTTGTCCGCGAGGGAGGCAGGCCCCG
HTMT1_0146_B01.b :
20110601C-004230 : TCCGGGGATCTTAGAAACCCTGCGGTCCATCATGAAGTTCCAGTATAAGGAGGACCATCC
---------+---------+---------+---------+---------+---------+ 274
LVR01_0093_B12.b : TCCGGGGATCTTAGAAACCCTGCGGTCCATCATGAAGTTCCAGTATAAGGAGGACCATCC
THY01_0062_E07.b : TCCGGGGATCTTAGAAACCCTGCGGTCCATCATGAAGTTCCAGTATAAGGAGGACCATCC
LVR01_0101_B12.b : TCCGGGGATCTTAGAAACCCTGCGGTCCATCATGAAGTTCCAGTATAAGGAGGACCATCC
SMG01_0032_F11.b : TCCGGGGATCTTAGAAACCCTGCGGTCCATCATGAAGTTCCAGTATAAGGAGGACCATCC
HTMT1_0146_B01.b :
20110601C-004230 : CTTTGAGTATCGGAAAAAGGAAGGAGAAAAGATCCGGAAGAAATATCCGGACCGGGTCCC
---------+---------+---------+---------+---------+---------+ 334
LVR01_0093_B12.b : CTTTGAGTATCGGAAAAAGGAAGGAGAAAAGATCCGGAAGAAATATCCGGACCGGGTCCC
THY01_0062_E07.b : CTTTGAGTATCGGAAAAAGGAAGGAGAAAGGATCCGGAAGAAATATCCGGACCGGGTCCC
LVR01_0101_B12.b : CTTTGAGTATCGGAAAAAGGAAGGAGAAAAGATCCGGAAGAAATATCCGGACCGGGTCCC
SMG01_0032_F11.b : CTTTGAGTATCGGAAAAAGGAAGGAGAAAAGATCCGGAAGAAATATCCGGACCGGGTCCC
HTMT1_0146_B01.b :
20110601C-004230 : CGTGATCGTGGAGAAGGCTCCTAAGGCCAGGGTACCTGATCTGGACAAGAGGAAGTACCT
---------+---------+---------+---------+---------+---------+ 394
LVR01_0093_B12.b : CGTGATCGTGGAGAAGGCTCCTAAGGCCAGGGTACCTGATCTGGACAAGAGGAAGTACCT
THY01_0062_E07.b : CGTGATCGTGGAGAAGGCTCCTAAGGCCAGGGTACCTGATCTGGACAAGAGGAAGTACCT
LVR01_0101_B12.b : CGTGATCGTGGAGAAGGCTCCTAAGGCCAGGGTACCTGATCTGGACAAGAGGAAGTACCT
SMG01_0032_F11.b : CGTGATCGTGGAGAAGGCTCCTAAGGCCAGGGTACCTGATCTGGACAAGAGGAAGTACCT
HTMT1_0146_B01.b :
20110601C-004230 : CGTGCCCTCTGACCTCACTGTTGGCCAGTTCTACTTCTTAATCCGGAAGAGGATCCACCT
---------+---------+---------+---------+---------+---------+ 454
LVR01_0093_B12.b : CGTGCCCTCTGACCTCACTGTTGGCCAGTTCTACTTCTTAATCCGGAAGAGGATCCACCT
THY01_0062_E07.b : CGTGCCCTCTGACCTCACTGTTGGCCAGTTCTACTTCTTAATCCGGAAGAGGATCCACCT
LVR01_0101_B12.b : CGTGCCCTCTGACCTCACTGTTGGCCAGTTCTACTTCTTAATCCGGAAGAGGATCCACCT
SMG01_0032_F11.b : CGTGCCCTCTGACCTCACTGTTGGCCAGTTCTACTTCTTAATCCGGAAGAGGATCCACCT
HTMT1_0146_B01.b :
20110601C-004230 : GAGACCTGAGGACGCCTTATTCTTCTTTGTCAACAACACCATCCCTCCCACTAGCGCGAC
---------+---------+---------+---------+---------+---------+ 514
LVR01_0093_B12.b : GAGACCTGAGGACGCCTTATTCTTCTTTGTCAACAACACCATCCCTCCCACTAGCGCGAC
THY01_0062_E07.b : GAGACCTGAGGACGCCTTATTCTTCTTTGTCAACAACACCATCCCTCCCACTAGCGCGAC
LVR01_0101_B12.b : GAGACCTGAGGACGCCTTATTCTTCTTTGTCAACAACACCATCCCTCCCACTAGCACGAC
SMG01_0032_F11.b : GAGACCTGAGGACGCCTTATTCTTCTTTGTCAACAACACCATCCCTCCCACTAGCGCGAC
HTMT1_0146_B01.b :
20110601C-004230 : CATGGGCCAGCTGTATGAGGACAACCACGAGGAAGACTACTTTCTGTACGTGGCCTACAG
---------+---------+---------+---------+---------+---------+ 574
LVR01_0093_B12.b : CATGGGCCAGCTGTATGAGGACAACCACGAGGAAGACTACTTTCTGTACGTGGCCTACAG
THY01_0062_E07.b : CATGGGCCAGCTGTATGAGGACAACCACGAGGAAGACTACTTTCTGTACGTGGCCTACAG
LVR01_0101_B12.b : CATGGGCCAGCTGTATGAGGACAACCACGAGGAAGACTACTTTCTGTACGTGGCCTACAG
SMG01_0032_F11.b : CATGGGCCAGCTGTATGAGGACAACCACGAGGAAGACTACTTTCTGTACGTGGCCTACAG
HTMT1_0146_B01.b : ttttttagcaggtacacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-004230 : CGACGAGAGTGTCTACGGGGAGTGAGTGGTGGAAGCCGGCAGATGGGAGCTCCTGGACTC
---------+---------+---------+---------+---------+---------+ 634
LVR01_0093_B12.b : CGACGAGAGTGTCTACGGGGAGTGGGTGGTGGAAGCCGGCAGATGGGAGCTCCTGGACTC
THY01_0062_E07.b : CGACGAGAGCGTCTACGGGGAGTGAGTGGTGGAAGCCGGCCGATGGGAGCTCCTGGACTC
LVR01_0101_B12.b : CGACGAGAGTGTCTACGGGGAGTGAGTGGTGGAAGCCGGCAGATGGGAGCTCCTGGACTC
SMG01_0032_F11.b : CGACGAGAGCGTCTACGGGGAGTGAGTGGTGGAAGCCGGCAGATGGGAGCTCCTGGACTC
HTMT1_0146_B01.b : xxxxxxxxgtGTCTACGGCGAGTGAGTGGTGGAAGCCGGCAGATGGGAGCTCCTGGACTC
20110601C-004230 : GGGGCAGGGGGAGGGGCGTGGGGCGAGAGAGGGAGGGCTCCCCCGTGGAGGACGACAGAG
---------+---------+---------+---------+---------+---------+ 694
LVR01_0093_B12.b : GGGGCAAGGGGAGGGGCGTGGGGCGAGGGAGGAAGGGCTCCCCCGTAGAGGACGACAGAG
THY01_0062_E07.b : GGGGCAGGGGGAGGGGCGTGGGGCGAGAGAGGGAGGGCTCCCCCGTGGAGGACGACAGAG
LVR01_0101_B12.b : GGGGCAGGGGGAGGGGCGTGGGGCGAGAGAGGGAGGGCTCCCCCGTGGAGGACGACAGAG
SMG01_0032_F11.b : GGGGCAGGGGGAGGGGCGTGCGGCGAGAGAGGGAGGGCTCCCCCGTGGAGGACGACAGAG
HTMT1_0146_B01.b : GGGGCAGGGGGAGGGGCGTGGGGCGAGAGAGGGAGGGCTCCCCCGTGGAGGACGACAGAG
20110601C-004230 : GAAAAAACATCTGGAAACACGACCTTGCACACACCATCACCACATTTCCACACACTCAAC
---------+---------+---------+---------+---------+---------+ 754
LVR01_0093_B12.b : GAAAGAACATCTGGAAACACGAACTTGCACACACGATCACCACATTTCCACACACTCAAC
THY01_0062_E07.b : GAAAAAACATCTGGAAACACGACCTTGCACACACCATCACCACATTTCCACACACTCAAC
LVR01_0101_B12.b : GAAAAAACATCTGGAAACACGACCTTGCACACACCATCACCACATTTCCACACACTCAAC
SMG01_0032_F11.b : GAAAAAACATCTGGGAACACGACCTTGCACACACCATCACCACATTTCCACACACTCAAC
HTMT1_0146_B01.b : GAAAAAACATCTGGAAACACGACCTTGCACACACCATCACCACATTTCCACACACTCAAC
20110601C-004230 : TGATA*TTTTTTTGCTGCCTTCTCGGCCCAGGGAGAAAGCACGTCAGGACAGAGCTGGCA
---------+---------+---------+---------+---------+---------+ 813
LVR01_0093_B12.b : TGATATTTTTTTTGCTGCCTTCTCGGCCCAGGGAGAAAGCACGTCAGGACAGAGCTGGCA
THY01_0062_E07.b : TGATA*TTTTTTTGCTGCCTTCTCGGCCCAGGGAGAAAGCACATCAGGACAGAGCTGGCA
LVR01_0101_B12.b : TGATA*TTTTTTTGCTGCCTTCTCGGCCCAGGGAGAAAGCACGTCAGGACAGAGCTGGCA
SMG01_0032_F11.b : TGATA*TTTTTTTGCTGCCTTCTCGGCCCAGGGAGAAAGCACGTCAGGACAGAGCTGGCA
HTMT1_0146_B01.b : TGATA*TTTTTTTGCTGCCTTCTCGGCCCAGGGAGAAAGCACGTCAGGACAGAGCTGGCA
20110601C-004230 : GATTGGCTTTGGTAGAAAAATGAGGATGCCCTCTAATCTCACAACACTACCACGTATTAA
---------+---------+---------+---------+---------+---------+ 873
LVR01_0093_B12.b : GATTGGCTTTGGTAGAAAAATGAGGATGCCCTTCTATCTCACAACACTACCcccgtatta
THY01_0062_E07.b : GATTGGCTTTGGTAGAAAAATGAGGATGCCCCTCTATCTCACAACACTACCGCGTATTAA
LVR01_0101_B12.b : GATTGGCTTTGGTAGAAAAATGAGGATGCCCTCTAATCTCACAACACTACCACGTATTAA
SMG01_0032_F11.b : AATTGGCTTTGGTANA*AAATGAGGATGCCCTCTAATCTCACAACACTAACGCGTATTAA
HTMT1_0146_B01.b : GATTGGCTTTGGTAGAAAAATGAGGATGCCCTCTAATCTCACAACACTACCACGTATTAA
20110601C-004230 : CTTTCGTGTGATTTCCATAGAAGAGGCAGGAGGTGGGCAGGCTGGGG*CCAGGGATCGTG
---------+---------+---------+---------+---------+---------+ 932
LVR01_0093_B12.b : actttcctggtgatttccatagaagaggcacggaggtgggggaaggctggggggcccggg
THY01_0062_E07.b : CTTTCGTGTGATTTCTATAGAAGAGGCAAGAGGTGGGCAGGCTGGGGGCCAGGGATCgtg
LVR01_0101_B12.b : CTTTCGTGTGATTTCCATAGAAGAGGCAGGGAGTGGGCAGGCTGGGGGCAAGGGATCATG
SMG01_0032_F11.b : CTTTCGTGGGATTTCcataaaaaaaggcaaaggtgggcaggcctggggccagggatcatg
HTMT1_0146_B01.b : CTTTCGTGTGATTTCCATAGAAGAGGCAGGAGGTGGGCAGGCTGGGG*CCAGGGATCGTG
20110601C-004230 : GACCACCGGTAACTTCCTGCTCTTCTTCTCTTGGGGCAGAGATTCTGTTTTTTGACATTT
---------+---------+---------+---------+---------+---------+ 992
LVR01_0093_B12.b : aatcaaggaaccccccgggtaaccttccctgcttcttcttttccttgggggcagaaaatt
THY01_0062_E07.b : aaccaacgggtaacttcctgcttctcttctcttggggcagagattctgttttttgacatt
LVR01_0101_B12.b : GACCACCGGTAACTTCCTGCTCTTCTTCTCTTGGGGCAAAGATTCTGTTTTTTtgacatt
SMG01_0032_F11.b : aaccacgggtaatttcctgctcttcttctctgggggagaaaatctggtttttgactttgc
HTMT1_0146_B01.b : GACCACCGGTAACTTCCTGCTCTTCTTCTCTTGGGGCAGAGATTCTGTTTTTTGACATTT
20110601C-004230 : GCACAAGACAGGTAGGGAAAGGGGAGGGAATGTTTGAGGACTGCTGGTAGTGGACCATTG
---------+---------+---------+---------+---------+---------+ 1052
LVR01_0093_B12.b : tctggttttttttgacattttgcccccaaaacccggggtaggggaaaaagggggaagggg
THY01_0062_E07.b : tgcacaaagacaggtagggaaaggggaagggaatgtttgaggaatggttggaagtggacc
LVR01_0101_B12.b : ttgcacaaagacaggtaggggaaagggggaggggaaatgttttgaaggacttggctgggt
SMG01_0032_F11.b : cccaacgggaagggaaagggaagggaaattttgaggaccgctggtaagggacaattgctg
HTMT1_0146_B01.b : GCACAAGACAGGTAGGGAAAGGGGAGGGAATGTTTGAGGACTGCTGGTAGTGGACCATTG
20110601C-004230 : CTGGGGACCAAAAGAGACCTATTGTGATGAAAGCCTTGTGACCCCCGACCTCTCCTATCT
---------+---------+---------+---------+---------+---------+ 1112
LVR01_0093_B12.b : gaaatttttttgaaagggaaccgcgtgtggggtaagtggggaaacccatttgggcgtggg
THY01_0062_E07.b : cttggctg
LVR01_0101_B12.b : aatggggaaccatttggctgggggggacccaaaaaaaaaaaacccctattttggggaaat
SMG01_0032_F11.b : gggacaaaaaaaccttttggataaagctttggacccccaactttcatttcccccttcccc
HTMT1_0146_B01.b : CTGGGGACCAAAAGAGACCTATTGTGATGAAAGCCTTGTGACCCCCGACCTCTCCTATCT
20110601C-004230 : CCACCCCTCCTCCCGAATCCCACCTGTCATCTCTCAAGCATCATGGTACCCACCCCAGTG
---------+---------+---------+---------+---------+---------+ 1172
LVR01_0093_B12.b : gggggaaccccaaaaaaaaaaaaaaaccccttttttgtggggggaataggaaaaagagac
THY01_0062_E07.b :
LVR01_0101_B12.b : tgaaaaaaccccctttttggggggaaccccccccccccaaaacccccttccctcccctca
SMG01_0032_F11.b : ccaaacccccgggattctttgagttttgggccccccccggggggacggggacccaaaccc
HTMT1_0146_B01.b : CCACCCCTCCTCCCGAATCCCACCTGTCATCTCTCAAGCATCATGGTACCCACCCCAGTG
20110601C-004230 : GCGACAGTGGACCCCAGACCCAGACACTTAGATGGAGCTCTCCTACGGCTGGAAAATGAT
---------+---------+---------+---------+---------+---------+ 1232
LVR01_0093_B12.b : ccctcctttgggtgggcaaaccccccccccccggccaccacccctccctccc
THY01_0062_E07.b :
LVR01_0101_B12.b : taatatctcctcttc
SMG01_0032_F11.b : acacttaaagggttcccccccccggaaaaataaggggcggcgctaaaatttaataataaa
HTMT1_0146_B01.b : GCGACAGTGGACCCCAGACCCAGACACTTAGATGGAGCTCTCCTACGGCTGGAAAATGAT
20110601C-004230 : AGGGGCCGGGCGTGAAGGATATTAGGATTATGAAGACAGTCTCGATAGCATTAAACTGGA
---------+---------+---------+---------+---------+---------+ 1292
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b : aaacccccgagtcttttagggggggccccccaaaaaaaaaaaaaaaaaaaaaaaaaaagc
HTMT1_0146_B01.b : AGGGGCCGGGCGTGAAGGATATTAGGATTATGAAGACAGTCTCGATAGCATTAAACTGGA
20110601C-004230 : ATTGACCCAGCACTGAGCATCCCTGTCTAACCTGCTTTGCTCTTTGGTGCCTCTTTTCGC
---------+---------+---------+---------+---------+---------+ 1352
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b : cctgtttcaattggggggggcccctttaatcccggggggcgt
HTMT1_0146_B01.b : ATTGACCCAGCACTGAGCATCCCTGTCTAACCTGCTTTGCTCTTTGGTGCCTCTTTTCGC
20110601C-004230 : ACCCCACCTTGGACTTGAATGCGCCTCAGCCATTTCCAGTTATAGGC.............
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : ACCCCACCTTGGACTTGAATGCGCCTCAGCCATTTCCAGTTATAGGCtaaaaccactcat
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : ctggcatttcccagcttcgctccatgaacagggacagagatgagttacggatagaagggt
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : ccgataggaggtaaaacgattgtctgcacctcccactcagccaaattccttgcttcccac
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : ccccaggaacctcagggagggcccgcgcctccctcttgggttttcatttaccccactgct
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : aataggaaatttgaaagggaccttttctaattcagaagatccccccttcgattatttctt
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : tcgggttacaaatggccacgggggcggggggggggaaaccagtttcccccaaattaattt
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : ccgttctccaaataaattcttttccccccaagaaaaaccctcgtggggaaatccttttct
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : cccccgcggttttaaaaaaatatccccgcgccggaaaaattttctccttaaactataata
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : aagaaaaatatgaananncttaaaaccccccccctctcctgtgtttgtcccaaaaatttg
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : ttgcccccacgatgaagattttgtttgttttttttctaagaacaacaaatttttttgtgg
20110601C-004230 : ............................................................
---------+---------+---------+---------+---------+---------+ 1399
LVR01_0093_B12.b :
THY01_0062_E07.b :
LVR01_0101_B12.b :
SMG01_0032_F11.b :
HTMT1_0146_B01.b : gtgggtttctgccacggcttcccc