Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-004595

Sequence: [FASTA format sequence] TTGTGGTGCC CCAGTCCTTG GCAGATAAAT GTCTTCCAGG CACTGACTGC CATTCCGCTT GGAGTTGCCT CACTAGAGCA GATGCGGGTC CGCCGGAGGT TCACCTTTGC AGTATGCATT TTAGAAATAA GCATTCTGAG CGCCGGGCCC ACACCCAGTT ACCACCCGAA GCCCGTGGAC TGCAATGGCA CACCATCGCC CATTGACTGC AGGATGAGTC CCTGGGGCGA ATGGTCAAGA TGTGACCCTT GCCTCAAACA AATGTTTCGC TCAAGGAGCA TTGAGACCTT TGGACAATTT AACGGGCAAA AGTGCGTGGA CGCCGTGGGG GACAGGCGGC AATGCGTGCC CACGGAGCCT TGCGAAGACC TTGAGGAGGA CTGTGGAAGT GACTTTCAGT GTGGTACAGG CAGATGCATA AAGAGGCGCC TTCTGTGTAA TGGTGACAAT GACTGCGGAG ACTTTTCAGA TGAGGATGAC TGTGACAGTG ATCCCCGCCC CCCCTGCCGT GAGAGAGTGG TGGAAGAGTC TGAGCTGGCA CGGACAGCAG GCTACGGGAT CAACATCTTA GGAATGGACC CCCTCACCAC CCCATTTGAC AACGAGTACT ACAACGGACT CTGTGACCGA GTTCGGGATG GAAACACCTT GACCTACTAC CGCAAACCCT GGAACGTGGC TGCCTTGATC TATGAAACCA AAGTTGACAA AAATTTCAGA ACTGAATATC ATGAAAGACA GATTCAAGTA CTCAAAACTA TCATCGAAGA GAAGAAATCA AATTTTAATG CAGATTTAAC TATAAAAATC ACACCTACCG AAGCAATTGA ACAGCTGAAA AGTAAAAATG TAGAACTTGC CAACGAAGAA AACTCCAATC CTATGAATAA CAAGGCTCAC CTCCGATTTA CATATTCCAA AAC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
C9 complement component C9 precursor [Homo sapiens]. 360 1e-99 O

C8A complement component C8 alpha chain precursor [Homo sapiens]. 105 6e-23 O

C6 complement component C6 precursor [Homo sapiens]. 97.4 2e-20

C6 complement component C6 precursor [Homo sapiens]. 97.4 2e-20

C7 complement component C7 precursor [Homo sapiens]. 95.9 5e-20 O

C8B complement component C8 beta chain preproprotein [Homo sapiens]. 81.6 9e-16

Locus	Definition	Score	E value	FL
C9	complement component C9 precursor [Homo sapiens].	360	1e-99	O
C8A	complement component C8 alpha chain precursor [Homo sapiens].	105	6e-23	O
C6	complement component C6 precursor [Homo sapiens].	97.4	2e-20
C6	complement component C6 precursor [Homo sapiens].	97.4	2e-20
C7	complement component C7 precursor [Homo sapiens].	95.9	5e-20	O
C8B	complement component C8 beta chain preproprotein [Homo sapiens].	81.6	9e-16

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
C9 complement component C9 [Mus musculus]. 291 5e-79 O

C7 complement component C7 [Mus musculus]. 96.3 3e-20 O

C8a complement component C8 alpha chain precursor [Mus musculus]. 96.3 3e-20 O

C6 complement component 6 [Mus musculus]. 92.4 4e-19

C8b complement component C8 beta chain precursor [Mus musculus]. 89.4 4e-18 O

Sspo SCO-spondin [Mus musculus]. 50.4 2e-06

LOC100505089 PREDICTED: SCO-spondin-like isoform 4 [Mus musculus]. 50.4 2e-06

LOC100505089 PREDICTED: SCO-spondin-like isoform 1 [Mus musculus]. 50.4 2e-06

LOC100505089 PREDICTED: SCO-spondin-like isoform 2 [Mus musculus]. 50.4 2e-06

LOC100505089 PREDICTED: SCO-spondin-like isoform 3 [Mus musculus]. 50.4 2e-06

Locus	Definition	Score	E value	FL
C9	complement component C9 [Mus musculus].	291	5e-79	O
C7	complement component C7 [Mus musculus].	96.3	3e-20	O
C8a	complement component C8 alpha chain precursor [Mus musculus].	96.3	3e-20	O
C6	complement component 6 [Mus musculus].	92.4	4e-19
C8b	complement component C8 beta chain precursor [Mus musculus].	89.4	4e-18	O
Sspo	SCO-spondin [Mus musculus].	50.4	2e-06
LOC100505089	PREDICTED: SCO-spondin-like isoform 4 [Mus musculus].	50.4	2e-06
LOC100505089	PREDICTED: SCO-spondin-like isoform 1 [Mus musculus].	50.4	2e-06
LOC100505089	PREDICTED: SCO-spondin-like isoform 2 [Mus musculus].	50.4	2e-06
LOC100505089	PREDICTED: SCO-spondin-like isoform 3 [Mus musculus].	50.4	2e-06

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC479354 PREDICTED: similar to Complement component C9 precursor [Canis familiaris]. 291 6e-79 O

LOC479348 PREDICTED: similar to Complement component C6 precursor isoform 2 [Canis familiaris]. 102 5e-22

LOC479348 PREDICTED: similar to Complement component C6 precursor isoform 1 [Canis familiaris]. 102 5e-22

LOC479349 PREDICTED: similar to complement component 6 [Canis familiaris]. 100 2e-21 O

LOC489221 PREDICTED: similar to complement component 7 precursor isoform 1 [Canis familiaris]. 92.4 5e-19 O

LOC479556 PREDICTED: similar to complement component 8, alpha polypeptide precursor [Canis familiaris]. 90.9 2e-18 O

LOC479555 PREDICTED: similar to Complement component C8 beta chain precursor (Complement component 8 beta subunit) [Canis familiaris]. 82.8 4e-16

LOC489221 PREDICTED: similar to complement component 7 precursor isoform 2 [Canis familiaris]. 77.4 2e-14 O

SSPO SCO-spondin [Canis lupus familiaris]. 50.4 2e-06

Locus	Definition	Score	E value	FL
LOC479354	PREDICTED: similar to Complement component C9 precursor [Canis familiaris].	291	6e-79	O
LOC479348	PREDICTED: similar to Complement component C6 precursor isoform 2 [Canis familiaris].	102	5e-22
LOC479348	PREDICTED: similar to Complement component C6 precursor isoform 1 [Canis familiaris].	102	5e-22
LOC479349	PREDICTED: similar to complement component 6 [Canis familiaris].	100	2e-21	O
LOC489221	PREDICTED: similar to complement component 7 precursor isoform 1 [Canis familiaris].	92.4	5e-19	O
LOC479556	PREDICTED: similar to complement component 8, alpha polypeptide precursor [Canis familiaris].	90.9	2e-18	O
LOC479555	PREDICTED: similar to Complement component C8 beta chain precursor (Complement component 8 beta subunit) [Canis familiaris].	82.8	4e-16
LOC489221	PREDICTED: similar to complement component 7 precursor isoform 2 [Canis familiaris].	77.4	2e-14	O
SSPO	SCO-spondin [Canis lupus familiaris].	50.4	2e-06

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
C9 complement component C9 precursor [Bos taurus]. 384 e-107 O

C6 complement component C6 precursor [Bos taurus]. 97.8 1e-20

C7 complement component C7 precursor [Bos taurus]. 94 2e-19 O

C8A complement component C8 alpha chain [Bos taurus]. 92 6e-19 O

C8B complement component 8, beta polypeptide [Bos taurus]. 89 5e-18

Locus	Definition	Score	E value	FL
C9	complement component C9 precursor [Bos taurus].	384	e-107	O
C6	complement component C6 precursor [Bos taurus].	97.8	1e-20
C7	complement component C7 precursor [Bos taurus].	94	2e-19	O
C8A	complement component C8 alpha chain [Bos taurus].	92	6e-19	O
C8B	complement component 8, beta polypeptide [Bos taurus].	89	5e-18

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100037951 complement component C9 [Sus scrofa]. 526 e-150 O

C8A complement component C8 alpha chain [Sus scrofa]. 102 3e-22 O

C6 complement component C6 [Sus scrofa]. 101 7e-22

LOC100627296 PREDICTED: complement component C6-like [Sus scrofa]. 95.1 5e-20

C7 complement component C7 precursor [Sus scrofa]. 94.4 8e-20 O

LOC100037954 complement component C8B [Sus scrofa]. 82.8 2e-16

Locus	Definition	Score	E value	FL
LOC100037951	complement component C9 [Sus scrofa].	526	e-150	O
C8A	complement component C8 alpha chain [Sus scrofa].	102	3e-22	O
C6	complement component C6 [Sus scrofa].	101	7e-22
LOC100627296	PREDICTED: complement component C6-like [Sus scrofa].	95.1	5e-20
C7	complement component C7 precursor [Sus scrofa].	94.4	8e-20	O
LOC100037954	complement component C8B [Sus scrofa].	82.8	2e-16

Assembly Members: 5 TOP

Library Plate Loc. Read Name Accession Full Seq.

CLNT1 0029 E08 CLNT1_0029_E08.b FS659336
CLNT1 0080 C12 CLNT1_0080_C12.b
CLNT1 0096 C05 CLNT1_0096_C05.b FS664006
CLNT1 0096 E01 CLNT1_0096_E01.b FS664026
LVRM1 0206 D07 LVRM1_0206_D07.b CJ007506

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
342 A 3 0 0.600 W S CAA/Q
G 1 1 0.400 CAG/Q

Alignment: TOP

20110601C-004595 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
CLNT1_0096_E01.b : nggatccgttagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0096_C05.b : nggactcgtttgcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b :                                                             
CLNT1_0080_C12.b :                                                 nttttgnnnnnt


20110601C-004595 : ..............TTGTGGTGCCCCAGTCCTTGGCAGATAAATGTCTTCCAGGCACTGA
                   ---------+---------+---------+---------+---------+---------+ 46
CLNT1_0096_E01.b : xxxxxxxxxxxxxxTTGTGGTGCCCCAGTCCTTGGCAGATAAATGTCTTCCAGGCACTGA
CLNT1_0096_C05.b : xxxxxxxxxxxxxxTTGTGGTGCCCCAGTCCTTGGCAGATAAATGTCTTCCAGGCACTGA
LVRM1_0206_D07.b :                      xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0029_E08.b :   acgttagctttacgatgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0080_C12.b : ttnggggacatgtcagcagagaggtacttcgctcaaaagcgcggaatcctcganantggt


20110601C-004595 : CTGCCATTCCGCTTGGAGTTGCCTCACTAGAGCAGATGCGGGTCCGCCGGAGGTTCACCT
                   ---------+---------+---------+---------+---------+---------+ 106
CLNT1_0096_E01.b : CTGCCATTCCGCTTGGAGTTGCCTCACTAGAGCAGATGCGGGTCCGCCGGAGGTTCACCT
CLNT1_0096_C05.b : CTGCCATTCCGCTTGGAGTTGCCTCACTAGAGCAGATGCGGGTCCGCCGGAGGTTCACCT
LVRM1_0206_D07.b : xxxxxxttccgctcGGAGCTGCCTCACTAGAGCAGATGCGGGTCCGCCGGAGGTTCACCT
CLNT1_0029_E08.b : xxxxxxxxxcgcttGGAGTTGCCTCACTAGAGCAGATGCGGGTCCGCCGGAGGTTCACCT
CLNT1_0080_C12.b : ggccccccacacagagnanngnnnnttnanannagangngggnnngccctcctaagaggn


20110601C-004595 : TTGCAGTATGCATTTTAGAAATAAGCATTCTGAGCGCCGGGCCCACACCCAGTTACCACC
                   ---------+---------+---------+---------+---------+---------+ 166
CLNT1_0096_E01.b : TTGCAGTATGCATTTTAGAAATAAGCATTCTGAGCGCCGGGCCCACACCCAGTTACCACC
CLNT1_0096_C05.b : TTGCAGTATGCATTTTAGAAATAAGCATTCTGAGCGCCGGGCCCACACCCAGTTACCACC
LVRM1_0206_D07.b : TTGCAGTATGCATTTTAGAAATAAGCATTCTGAGCGCCGGGCCCACACCCAGTTACCACC
CLNT1_0029_E08.b : TTGCAGTGTGCATTTTACAAATAAGCATTCTGAGCGCCGGGCCCACACCCAGTTACCACC
CLNT1_0080_C12.b : nngnagnangnattnnanaaanaagaattaggagngangggncaaaacngagntagnann


20110601C-004595 : CGAAGCCCGTGGACTGCAATGGCACACCATCGCCCATTGACTGCAGGATGAGTCCCTGGG
                   ---------+---------+---------+---------+---------+---------+ 226
CLNT1_0096_E01.b : CGAAGCCCGTGGACTGCAATGGCACACCATCGCCCATTGACTGCAGGATGAGTCCCTGGG
CLNT1_0096_C05.b : CGAAGCCCGTGGACTGCAATGGCACACCATCGCCCATTGACTGCAGGATGAGTCCCTGGG
LVRM1_0206_D07.b : CGAAGCCCGTGGACTGCAATGGCACACCATCGCCCATTGACTGCAGGATGAGTCCCTGGG
CLNT1_0029_E08.b : CGAAGCCCGTGGACTGCAATGGCACACCATCGCCCATTGACTGCAGGATGAGTCCCTGGG
CLNT1_0080_C12.b : ngagagagggggagtgaAATGGNAAANCATCGATAATTGAATGGAGGATGAGTANATGGG


20110601C-004595 : GCGAATGGTCAAGATGTGACCCTTGCCTCAAACAAATGTTTCGCTCAAGGAGCATTGAGA
                   ---------+---------+---------+---------+---------+---------+ 286
CLNT1_0096_E01.b : GCGAATGGTCAAGATGTGACCCTTGCCTCAAACAAATGTTTCGCTCAAGGAGCATTGAGA
CLNT1_0096_C05.b : GCGAATGGTCAAGATGTGACCCTTGCCTCAAACAAATGTTTCGCTCAAGGAGCATTGAGA
LVRM1_0206_D07.b : GCGAATGGTCAAGATGTGACCCTTGCCTCAAACAAATGTTTCGCTCAAGGAGCATTGAGA
CLNT1_0029_E08.b : GCGAATGGTCAAGATGTGACCCTTGCCTCAAACAAATGTTTCGCTCAAGGAGCATTGAGA
CLNT1_0080_C12.b : GNGAATGGTNAAGATGTGAACCTTGCCTCAAACAAATGTTTCGCTCAAGGAGCATTGAGA


20110601C-004595 : CCTTTGGACAATTTAACGGGCAAAAGTGCGTGGACGCCGTGGGGGACAGGCGGCAATGCG
                   ---------+---------+---------+---------+---------+---------+ 346
CLNT1_0096_E01.b : CCTTTGGACAATTTAACGGGCAAAAGTGCGTGGACGCCGTGGGGGACAGGCGGCAATGCG
CLNT1_0096_C05.b : CCTTTGGACAATTTAACGGGCAAAAGTGCGTGGACGCCGTGGGGGACAGGCGGCAATGCG
LVRM1_0206_D07.b : CCTTTGGACAATTTAACGGGCAAAAGTGCGTGGACGCCGTGGGGGACAGGCGGCAGTGCG
CLNT1_0029_E08.b : CCTTTGGACAATTTAACGGGCAAAAGTGCGTGGACGCTGTGGGGGACAGGCGGCAGTGCA
CLNT1_0080_C12.b : CCTTTGGACAATTTAACGGGCAAAAGTGCGTGGACGCCGTGGGGGACAGGCGGCAATGCG


20110601C-004595 : TGCCCACGGAGCCTTGCGAAGACCTTGAGGAGGACTGTGGAAGTGACTTTCAGTGTGGTA
                   ---------+---------+---------+---------+---------+---------+ 406
CLNT1_0096_E01.b : TGCCCACGGAGCCTTGCGAAGACCTTGAGGAGGACTGTGGAAGTGACTTTCAGTGTGGTA
CLNT1_0096_C05.b : TGCCCACGGAGCCTTGCGAAGACCTTGAGGAGGACTGTGGAAGTGACTTTCAGTGTGGTA
LVRM1_0206_D07.b : TGCCCACGGAGCCTTGCGAAGACCTTGGGGAGGACTGTGGAAGTGACTTTCAGTGTGGTA
CLNT1_0029_E08.b : TGCCCACGGAGCCTTGCGAAGACCTTGAGGAGGACTGTGGAAGTGACTTTCAGTGTGGTA
CLNT1_0080_C12.b : TGCCCACGGAGCCTTGCGAAGACCTTGAGGAGGACTGTGGAAGTGACTTTCAGTGTGGTA


20110601C-004595 : CAGGCAGATGCATAAAGAGGCGCCTTCTGTGTAATGGTGACAATGACTGCGGAGACTTTT
                   ---------+---------+---------+---------+---------+---------+ 466
CLNT1_0096_E01.b : CAGGCAGATGCATAAAGAGGCGCCTTCTGTGTAATGGTGACAATGACTGCGGAGACTTTT
CLNT1_0096_C05.b : CAGGCAGATGCATAAAGAGGCGCCTTCTGTGTAATGGTGACAATGACTGCGGAGACTTTT
LVRM1_0206_D07.b : CAGGCAGATGCATAAAGAGGCGCCTTCTGTGTAATGGTGACAATGACTGCGGAGACTTTT
CLNT1_0029_E08.b : CAGGCAGATGCATAAAGAGGCGCCTTCTGTGTAATGGTGACAATGACTGCGGAGACTTTT
CLNT1_0080_C12.b : CAGGCAGATGCATAAAGAGGCGCCTTCTGTGTAATGGTGACAATGACTGCGGAGACTTTT


20110601C-004595 : CAGATGAGGATGACTGTGACAGTGATCCCCGCCCCCCCTGCCGTGAGAGAGTGGTGGAAG
                   ---------+---------+---------+---------+---------+---------+ 526
CLNT1_0096_E01.b : CAGATGAGGATGACTGTGACAGTGATCCCCGCCCCCCCTGCCGTGAGAGAGTGGTGGAAG
CLNT1_0096_C05.b : CAGATGAGGATGACTGTGACAGTGATCCCCGCCCCCCCTGCCGTGAGAGAGTGGTGGAAG
LVRM1_0206_D07.b : CAGATGAGGATGACTGTGACAGTGATCCCCGCCCCCCCTGCCGTGAGAGAGTGGTGGAAG
CLNT1_0029_E08.b : CAGATGAGGATGACTGTGACAGTGATCCCCGCCCCCCCTGCCGTGAGAGAGTGGTGGAAG
CLNT1_0080_C12.b : CAGATGAGGATGACTGTGACAGTGATCCCCGCCCCCCCTGCCGTGAGAGAGTGGTGGAAG


20110601C-004595 : AGTCTGAGCTGGCACGGACAGCAGGCTACGGGATCAACATCTTAGGAATGGACCCCCTCA
                   ---------+---------+---------+---------+---------+---------+ 586
CLNT1_0096_E01.b : AGTCTGAGCTGGCACGGACAGCAGGCTACGGGATCAACATCTTAGGAATGGACCCCCTCA
CLNT1_0096_C05.b : AGTCTGAGCTGGCACGGACAGCAGGCTACGGGATCAACATCTTAGGAATGGACCCCCTCA
LVRM1_0206_D07.b : AGTCTGAGCTGGCACGGACAGCAGGCTACGGGATCAACATCTTAGGAATGGACCCCCTCA
CLNT1_0029_E08.b : AGTCTGATCTGGCACGGACAGCAGGCTACCGGATCAACATCTTATGAATGGACCCCCTCA
CLNT1_0080_C12.b : AGTCTGAGCTGGCACGGACAGCAGGCTACGGGATCAACATCTTAGGAATGGACCCCCTCA


20110601C-004595 : CCACCCCATTTGACAACGAGTACTACAACGGACTCTGTGACCGAGTTCGGGATGGAAACA
                   ---------+---------+---------+---------+---------+---------+ 646
CLNT1_0096_E01.b : CCACCCCATTTGACAACGAGTACTACAACGGACTCTGTGACCGAGTTCGGGATGGAAACA
CLNT1_0096_C05.b : CCACCCCATTTGACAACGAGTACTACAACGGACTCTGTGACCGAGTTCGGGATGGAAACA
LVRM1_0206_D07.b : CCACCCCATTTGACAACGAGTACTACAACGGACTCTGTGACCGAGTTCGGGATGGAAACA
CLNT1_0029_E08.b : CCACCCCATTTGACTACGAGTACTACAACGGACTCTGTGACCGAGTTCGGGATGGAAACA
CLNT1_0080_C12.b : CCACCCCATTTGACAACGAGTACTACAACGGACTCTGTGACCGAGTTCGGGATGGAAACA


20110601C-004595 : CCTTGACCTACTACCGCAAACCCTGGAACGTGGCTGCCTTGATCTATGAAACCAAAGTTG
                   ---------+---------+---------+---------+---------+---------+ 706
CLNT1_0096_E01.b : CCTTGACCTACTACCGCAAACCCTGGAACGTGGCTGCCTTGATCTATGAAACCAAAGTTG
CLNT1_0096_C05.b : CCTTGACCTACTATCGCAAACCCTGGAACGTGGCTGCCTTGATCTATGAAACCAAAGTTG
LVRM1_0206_D07.b : CCTTGACCTACTACCGCAAACCCTGGAACGTGGCTGCCTTGATCTATGAA*CCAAAGTTG
CLNT1_0029_E08.b : CCTTGACCTACTACCGCAAACCCCGAAACGTGGCTGCCTTGATCTATGAAACCCAAGTTG
CLNT1_0080_C12.b : CCTTGACCTACTACCGCAAACCCTGGAACGTGGCTGCCTTGATCTATGAAACCAAAGTTG


20110601C-004595 : ACAAAAATTTCAGAACTGAATATCATGAAAGACAGATTCAAGTACTCAAAACTATCATCG
                   ---------+---------+---------+---------+---------+---------+ 766
CLNT1_0096_E01.b : ACAAAAATTTCAGAACTGAATATCATGAAAGACAGATTCAAGTACTCAAAACTATCATCG
CLNT1_0096_C05.b : ACAAAAATTTCAGAACTGAATATCATGAAAGACAGATTCAAGTACTCAAAACTATCATCG
LVRM1_0206_D07.b : ACAAAAATTTCAGAACTGAATATCATGAAAGACAGATTCAAGTACTCAAAACTATCATCG
CLNT1_0029_E08.b : ACAAAAATTTCAGAACTGAATATCTTGAAAGATCAATTCAAGTACACATATCTATCATCG
CLNT1_0080_C12.b : ACAAAAATTTCAGAACTGAATATCATGAAAGACAGATTCAAGTACTCAAAACTATCATCG


20110601C-004595 : AAGAGAAGAAATCAAATTTTAATGCAGATTTAACTATAAAAATCACACCTACCGAAGCAA
                   ---------+---------+---------+---------+---------+---------+ 826
CLNT1_0096_E01.b : AAGAGAAGAAATCAAATTTTAATGCAGATTTAACTATAAAAATCACACCTACCGAAACAA
CLNT1_0096_C05.b : AAGAGAAGAAATCAAATTTTAATGCAGATTTAACTATAAAAATCACACCTACCGAAGCAA
LVRM1_0206_D07.b : AAGAGAAGAAAatcaatttttatgcagattt                            
CLNT1_0029_E08.b : AAaaaaaaaaacaaactttaatggctatttaactataatattccaacctaccgaaacaat
CLNT1_0080_C12.b : AAGAGAAGAAATCAAATTGTAATGCAGAATTAACTATAAAATTCACACCTACCGAAGCAA


20110601C-004595 : TTGAACAGCTGAAAAGTAAAAATGTAGAACTTGCCAACGAAGAAAACTCCAATCCTATGA
                   ---------+---------+---------+---------+---------+---------+ 886
CLNT1_0096_E01.b : TTGAACAGCTGAAAAGTA*AAATGTAGAACTTGCCAACGAAGAAActcaaatcctatgaa
CLNT1_0096_C05.b : TTGAACAGCTGAAAAGTAAAAATGTAGAACTTGCCNACGAAGAAAACTCCAATCCTATGA
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : tgaacaactgaaatataaaattgtagatctttgccaacaaaaaaaatttaaatctttgaa
CLNT1_0080_C12.b : TTGAACAGCTGAAAAGTAAAAATGTAGAACTTGCCAACGAAGAAActcaaatcctatgaa


20110601C-004595 : ATAACAAGGCTCACCTCCGATTTACATATTCCAAAAC.......................
                   ---------+---------+---------+---------+---------+---------+ 923
CLNT1_0096_E01.b : taacaggctcccttccgaatttacttttccaaaacgaaacctacaaactggtggtgtcct
CLNT1_0096_C05.b : ATAACAAGGCTCACCTCCGATTTACATATTCCAAAACggaaacttacaaattgttgttgt
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : aaacaaggatcacttcctaattttatattcccaaaacggaaacctacaaactgttgtagt
CLNT1_0080_C12.b : taacaggctcactcccgattacatatcccaaaacgaaacctacaactgttgntggcatat


20110601C-004595 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 923
CLNT1_0096_E01.b : attcttcaaaaaggaaaaatatttccgcctgtcaaggagtaattcacctgggagaattgt
CLNT1_0096_C05.b : catattcttctaagagggaaaaaatattctgcatgtcaaaggaagtattcactggggaag
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : cattttctacttaaaaaggaaaaatatttcctgccgataaaaggattaattcccctggaa
CLNT1_0080_C12.b : cttccaagagggaaaatnatcctgcatgcaaaggagtantccactgcgaagattgtgaag


20110601C-004595 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 923
CLNT1_0096_E01.b : gaagaaaaaccgggatgtcatgctgaaaaaattttctgaaggatgtaaagttcctgccag
CLNT1_0096_C05.b : tattgggatgaaaaaacgggatgctctgctgacaaaactttcttggaggagtaaagtttc
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : aaaattttgaagaaaaaacagggtattcctgcatacaaatattttcttggatgaatttaa
CLNT1_0080_C12.b : aaaagcgggaagcctgctgacaaaaacttctggaggagtaaagaaccgccaggacctaga


20110601C-004595 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 923
CLNT1_0096_E01.b : tcccttgaaaaggggaaattttcgctttttggaaccctttgaaccccctcaagttctctg
CLNT1_0096_C05.b : tgccagtcccttgaaaagggaaaatttttggattttggaaacctgtgaacccccttagta
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : tcttctgcaaataccctttaaatggtgaatattttctatttttggaaaactttgataacc
CLNT1_0080_C12.b : aaagggagaaaattgcattttgggaaccatggacccccaagtaccccggtgcccggggga


20110601C-004595 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 923
CLNT1_0096_E01.b : gggtcctgggaagactttgaaaaaataatttttgggaaagcccccccgctggaaagggtt
CLNT1_0096_C05.b : ccttgggttcttgggggaatcttgacaaaatttgttctggaaagctcccgtgcgagaagg
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : actacagtgacccaggtgttctgtgaagtactcaaaagactattgagagtcaacagacgt
CLNT1_0080_C12.b : cccagaaaaaaaaaggtcgggaaaacccccgacggaaaagggtgaaaacgggagggccaa


20110601C-004595 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 923
CLNT1_0096_E01.b : tgaattgggagtggccacaggcccggggttaaccggattttctccgaattggggggaaca
CLNT1_0096_C05.b : gtttactccggggtccccaggccctggttatcgggattttccaatttggggggaaccaag
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : cctagtggttaacatgatttttttcaaattttatgaaataaaacttagaaacaatttttc
CLNT1_0080_C12.b : gggccgggggtaaacgggataccccaattggggggaaacaggaaaaggttcaaaagtctt


20110601C-004595 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 923
CLNT1_0096_E01.b : agggaaaat                                                  
CLNT1_0096_C05.b : ggaatgtttacaatgttttaagggggggggaaacaaaacctgaggaatctctgaaatttt
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : cctaaaattttttagagaggtatcattacataaactacctaatacatcaatcttctagag
CLNT1_0080_C12.b : aaggggggggaacaaac                                          


20110601C-004595 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 923
CLNT1_0096_E01.b :                                                             
CLNT1_0096_C05.b : tctttaagggacacaaaaccctttggagaaatt                          
LVRM1_0206_D07.b :                                                             
CLNT1_0029_E08.b : gtatctttttctcttgaaacgatgaaaaaaatatcttcctccacgtgtaaa        
CLNT1_0080_C12.b :