Assembly Overview:
TOP
BLAST on RefSeq (Human):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | BCAT1 | branched-chain-amino-acid aminotransferase, cytosolic isoform 5 [Homo sapiens]. | 476 | e-134 | |
 |
 | BCAT1 | branched-chain-amino-acid aminotransferase, cytosolic isoform 4 [Homo sapiens]. | 476 | e-134 | |
 |
 | BCAT1 | branched-chain-amino-acid aminotransferase, cytosolic isoform 3 [Homo sapiens]. | 476 | e-134 | |
 |
 | BCAT1 | branched-chain-amino-acid aminotransferase, cytosolic isoform 2 [Homo sapiens]. | 476 | e-134 | |
 |
 | BCAT1 | branched-chain-amino-acid aminotransferase, cytosolic isoform 1 [Homo sapiens]. | 476 | e-134 | |
 |
 | BCAT2 | branched-chain-amino-acid aminotransferase, mitochondrial isoform b [Homo sapiens]. | 314 | 9e-86 | |
 |
 | BCAT2 | branched-chain-amino-acid aminotransferase, mitochondrial isoform a precursor [Homo sapiens]. | 314 | 9e-86 | |
BLAST on RefSeq (Mouse):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | Bcat1 | branched-chain-amino-acid aminotransferase, cytosolic isoform 2 [Mus musculus]. | 447 | e-126 | |
 |
 | Bcat1 | branched-chain-amino-acid aminotransferase, cytosolic isoform 1 [Mus musculus]. | 447 | e-126 | |
 |
 | Bcat2 | branched-chain-amino-acid aminotransferase, mitochondrial isoform 2 [Mus musculus]. | 315 | 6e-86 | |
 |
 | Bcat2 | branched-chain-amino-acid aminotransferase, mitochondrial isoform 2 [Mus musculus]. | 315 | 6e-86 | |
 |
 | Bcat2 | branched-chain-amino-acid aminotransferase, mitochondrial isoform 1 precursor [Mus musculus]. | 315 | 6e-86 | |
BLAST on RefSeq (Dog):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | LOC486633 | PREDICTED: similar to branched chain aminotransferase 1, cytosolic [Canis familiaris]. | 476 | e-134 | |
 |
 | BCAT2 | PREDICTED: similar to Branched-chain-amino-acid aminotransferase, mitochondrial precursor (BCAT(m)) (Placental protein 18) (PP18) [Canis familiaris]. | 310 | 1e-84 | |
BLAST on RefSeq (Cattle):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | BCAT1 | branched-chain-amino-acid aminotransferase, cytosolic [Bos taurus]. | 483 | e-136 | |
 |
 | BCAT2 | branched-chain-amino-acid aminotransferase, mitochondrial precursor [Bos taurus]. | 304 | 9e-83 | |
BLAST on RefSeq (Pig):
TOP
| | Locus | Definition | Score | E value | FL |
---|
 |
 | LOC100518784 | PREDICTED: branched-chain-amino-acid aminotransferase, cytosolic-like [Sus scrofa]. | 350 | 9e-97 | |
 |
 | BCAT2 | PREDICTED: branched-chain-amino-acid aminotransferase, mitochondrial isoform 3 [Sus scrofa]. | 312 | 3e-85 | |
 |
 | BCAT2 | PREDICTED: branched-chain-amino-acid aminotransferase, mitochondrial isoform 2 [Sus scrofa]. | 312 | 3e-85 | |
Alignment:
TOP
20110601C-004957 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
DCI01_0087_H05.b : nnnnnnccatactaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0114_G12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxx
AMP01_0054_E07.b :
AMP01_0089_B03.b :
20110601C-004957 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
DCI01_0087_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0114_G12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0054_E07.b :
AMP01_0089_B03.b :
20110601C-004957 : ..................................................TATTCAACAG
---------+---------+---------+---------+---------+---------+ 10
DCI01_0087_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTATTCAACAG
DCI01_0114_G12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTATTCAACAG
AMP01_0054_E07.b :
AMP01_0089_B03.b :
20110601C-004957 : CTTGTGAAATTGGATCAAGAATGGGTCCCCTATTCAACATCTGCAAGTCTCTATATTCGT
---------+---------+---------+---------+---------+---------+ 70
DCI01_0087_H05.b : CTTGTGAAATTGGATCAAGAATGGGTCCCCTATTCAACATCTGCAAGTCTCTATATTCGT
DCI01_0114_G12.b : CTTGTGAAATTGGATCAAGAATGGGTCCCCTATTCAACATCTGCAAGTCTCTATATTCGT
AMP01_0054_E07.b : nnnggctatannntaagggacacxxxxxxx
AMP01_0089_B03.b :
20110601C-004957 : CCTACGTTCATTGGAACTGAGCCTTCCCTGGGAGTCAAGAAGCCTACGAAAGCCCTGATC
---------+---------+---------+---------+---------+---------+ 130
DCI01_0087_H05.b : CCTACGTTCATTGGAACTGAGCCTTCCCTGGGAGTCAAGAAGCCTACGAAAGCCCTGATC
DCI01_0114_G12.b : CCTACGTTCATTGGAACTGAGCCTTCCCTGGGAGTCAAGAAGCCTACGAAAGCCCTGATC
AMP01_0054_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0089_B03.b :
20110601C-004957 : TTTGTAATCTTGAGCCCAGTGGGACCTTATTTTTCAAGTGGAAGCTTTAATCCAGTGTCC
---------+---------+---------+---------+---------+---------+ 190
DCI01_0087_H05.b : TTTGTAATCTTGAGCCCAGTGGGACCTTATTTTTCAAGTGGAAGCTTTAATCCAGTGTCC
DCI01_0114_G12.b : TTTGTAATCTTGAGCCCAGTGGGACCTTATTTTTCAAGTGGAAGCTTTAATCCAGTGTCC
AMP01_0054_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0089_B03.b : naaaaggtatcttgggggctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-004957 : CTGTGGGCCAATCCGAAGTATGTCAGAGCCAGGAAAGGTGGGACTGGGGACTGCAAGATG
---------+---------+---------+---------+---------+---------+ 250
DCI01_0087_H05.b : CTGTGGGCCAATCCGAAGTATGTCAGAGCCAGGAAAGGTGGGACTGGGGACTGCAAGATG
DCI01_0114_G12.b : CTGTGGGCCAATCCGAAGTATGTCAGAGCCAGGAAAGGTGGGACTGGGGACTGCAAGATG
AMP01_0054_E07.b : xxxxxxxxxxxxxxxxxxxxxxTCAGAGCCTGGAAAGGTGGGACTGGGGACTGCAAGATG
AMP01_0089_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-004957 : GGAGGGAATTATGGCTCATCGCTTTTTGCTCAATGTGAAGCAATCGAGAATGCATGCCAG
---------+---------+---------+---------+---------+---------+ 310
DCI01_0087_H05.b : GGAGGGAATTATGGCTCATCGCTTTTTGCTCAATGTGAAGCAATCGAGAATGCATGCCAG
DCI01_0114_G12.b : GGAGGGAATTATGGCTCATCGCTTTTTGCTCAATGTGAAGCAATCGAGAATGCATGCCAG
AMP01_0054_E07.b : GGAGGGAATTATGGCTCATCGCTTTTTGCTCAATGTGAAGCAATCGAGAATGCATGCCAG
AMP01_0089_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATCGAGAATGCATGCCAG
20110601C-004957 : CAGGTTCTGTGGCTCTATGGAGAGGATAATCAGATAACTGAAGTTGGAACTATGAATCTT
---------+---------+---------+---------+---------+---------+ 370
DCI01_0087_H05.b : CAGGTTCTGTGGCTCTATGGAGAGGATAATCAGATAACTGAAGTTGGAACTATGAATCTT
DCI01_0114_G12.b : CAGGTTCTGTGGCTCTATGGAGAGGATAATCAGATAACTGAAGTTGGAACTATGAATCTT
AMP01_0054_E07.b : CAGGTTCTGTGGCTCTATGGAGAGGATAATCAGATAACTGAAGTTGGAACTATGAATCTT
AMP01_0089_B03.b : CAGGTTCTGTGGCTCTATGGAGAGGATAATCAGATAACTGAAGTTGGAACTATGAATCTT
20110601C-004957 : TTTCTTTACTGGATAAATGAAAATGGAGAGGAAGAGCTGGCAACTCCCCCGCTAGATGGC
---------+---------+---------+---------+---------+---------+ 430
DCI01_0087_H05.b : TTTCTTTACTGGATAAATGAAAATGGAGAGGAAGAGCTGGCAACTCCCCCGCTAGATGGC
DCI01_0114_G12.b : TTTCTTTACTGGATAAATGAAAATGGAGAGGAAGAGCTGGCAACTCCCCCGCTAGATGGC
AMP01_0054_E07.b : TTTCTTTACTGGATAAATGAAAATGGAGAGGAAGAGCTGGCAACTCCCCCGCTAGATGGC
AMP01_0089_B03.b : TTTCTTTACTGGATAAATGAAAATGGAGAGGAAGAGCTGGCAACTCCCCCGCTAGATGGC
20110601C-004957 : ATCATTCTTCCAGGAGTGACGAGGCAGAGCATTCTGGACCTGGCACACAACTGGGGTGAA
---------+---------+---------+---------+---------+---------+ 490
DCI01_0087_H05.b : ATCATTCTTCCAGGAGTGACGAGGCAGAGCATTCTGGACCTGACACACAACTGGGGTGAA
DCI01_0114_G12.b : ATCATTCTTCCAGGAGTGACGAGGCAGAGCATTCTGGACCTGACACACAACTGGGGTGAA
AMP01_0054_E07.b : ATCATTCTTCCAGGAGTGACGAGGCAGAGCATTCTGGACCTGGCACACAACTGGGGTGAA
AMP01_0089_B03.b : ATCATTCTTCCAGGAGTGACGAGGCAGAGCATTCTGGACCTGGCACACAACTGGGGTGAA
20110601C-004957 : TTTAAGGTGTCAGAGAGGTACCTCACCATGGACGACTTGACCACCGCCTTGGAGGAGAGC
---------+---------+---------+---------+---------+---------+ 550
DCI01_0087_H05.b : TTTAAGGTGTCAGAGAGGTACCTCACCATGGACGACTTGACCACCGCCTTGGAGGAGAGC
DCI01_0114_G12.b : TTTAAGGTGTCAGAGAGGTACCTCACCATGGACGACTTGACCACCGCCTTGGAGGAGAGC
AMP01_0054_E07.b : TTTAAGGTGTCAGAGAGGTACCTCACCATGGACGACTTGACCACCGCCTTGGAGGAGAGC
AMP01_0089_B03.b : TTTAAGGTGTCAGAGAGGTACCTCACCATGGACGACTTGACCACCGCCTTGGAGGAGAGC
20110601C-004957 : CGGGTGAGGGAGATGTTCGGTTCGGGTACCGCCTGCGTTGTTTGCCCAGTTTCGAAAATA
---------+---------+---------+---------+---------+---------+ 610
DCI01_0087_H05.b : CGGGTGAGGGAGATGTTCGGTTCGGGTACCGCCTGCGTTGTTTGCCCAGTTTCGAAAATA
DCI01_0114_G12.b : CGGGTGAGGGAGATGTTCGGTTCGGGTACCGCCTGCGTTGTTTGCCCAGTTTCGAAAATA
AMP01_0054_E07.b : CGGGTGAGGGAGATGTTCGGTTCGGGTACCGCCTGCGTTGTTTGCCCAGTTTCGAAAATA
AMP01_0089_B03.b : CGGGTGAGGGAGATGTTCGGTTCGGGTACCGCCTGCGTTGTTTGCCCAGTTTCGAAAATA
20110601C-004957 : CTGTACAAGGGTGAGACTATACACATTCCAACTATGGAGAATGGTCCTAAGCTTGCCAGC
---------+---------+---------+---------+---------+---------+ 670
DCI01_0087_H05.b : CTGTACAAGGGTGAGACTATACACATTCCAACTATGGAGAATGGTCCTAAGCTTGCCAGC
DCI01_0114_G12.b : CTGTACAAGGGTGAGACTATACACATTCCAACTATGGAGAATGGTCCTAAGCTTGCCAGC
AMP01_0054_E07.b : CTGTACAAGGGTGAGACTATACACATTCCAACTATGGAGAATGGTCCTAAGCTTGCCAGC
AMP01_0089_B03.b : CTGTACAAGGGTGAGACTATACACATTCCAACTATGGAGAATGGTCCTAAGCTTGCCAGC
20110601C-004957 : CGTATCTTGGAAAAACTGACTGATATTCAGTATGGAAGAGAAGAGAGCGACTGGACAATC
---------+---------+---------+---------+---------+---------+ 730
DCI01_0087_H05.b : CGTATCTTGAAAAAACTGACTGATATTCAGTATGGAAGAGAAGAGAGCGACTGGACAATC
DCI01_0114_G12.b : CGTATCTTGGAAAAACTGACTGATATTCAGTATGGAAGAAGAGAGAGCGACTGGGACATC
AMP01_0054_E07.b : CGTATCTTGGAAAAACTGACTGATATTCAGTATGGAAGAGAAGAGAGCGACTGGACAATC
AMP01_0089_B03.b : CGTATCTTGGAAAAACTGACTGATATTCAGTATGGAAGAGAAGAGAGCGACTGGACAATC
20110601C-004957 : CTAGTGTCCTGAGTGGAAAATAACAGGACATCATCTGTGTGCTATTGGGACAGACTGTTG
---------+---------+---------+---------+---------+---------+ 790
DCI01_0087_H05.b : CTAGTGTCCTGAGTGGAAAATAACANGACATCATCTGTGTGCTATTGGGACAGACTGTTG
DCI01_0114_G12.b : CTAGTGTCCTGAGTGGAAAATAACAGGACATCATCTGTGTGCTATTGGGACAGACTGTTG
AMP01_0054_E07.b : CTAGTGTCCTGAGTGGAAAATAACAGGACATCATCTGTGTGCTATTGGGACAGACTGTTG
AMP01_0089_B03.b : CTAGTGTCCTGAGTGGAAAATAACAGGACATCATCTGTGTGCTATTGGGACAGACTGTTG
20110601C-004957 : CATTTGAATTATGAGAAACTTCTTCAGCGACTTGTTTTTAGTTGTGCACAATGTGGTTTG
---------+---------+---------+---------+---------+---------+ 850
DCI01_0087_H05.b : CATTTGAATTATGANGAACTTCTTCAGCGACTTGTTTTTAgttgtgcacagtgtggtttn
DCI01_0114_G12.b : CATTTGAA*TATGAGAAACTTCTTCAGCGACTTGTTTTTAttgtgcacagtgtgttttgt
AMP01_0054_E07.b : CATTTGAATTATGAGAAACTTCTTCAGCGACTTGTTTTTAttggncccacnggtgtggtt
AMP01_0089_B03.b : CATTTGAATTATGAGAAACTTCTTCAGCGACTTGTTTTTAGTTGTGCACAATGTGGTTTG
20110601C-004957 : TATTATCAGTGTCACCAGGGTGATTGTTTCCTCCTGCCAGAGAAAACAAATTACAATCAT
---------+---------+---------+---------+---------+---------+ 910
DCI01_0087_H05.b : gtatatcagtgtcaccagggtgattgttcctccntgcagagaaacaattacnatcatccn
DCI01_0114_G12.b : atatcagtgtcacagggtgaatgtttcctcctgccaaanaaacaaattacaatcatccaa
AMP01_0054_E07.b : tggtataatcntgtcaccangggtaattgttccctcctgccaaagaaaacaaattacaat
AMP01_0089_B03.b : TATTATCAGTGTCACCAGGGTGATTGTTTCCTCCTGCCAGAGAAAACAAATTACAATCAT
20110601C-004957 : CCAATGGTACTTTACCAACTGGCTCGTAGAAGCTTACCTTACCTTCTCTAGAAAGATGAT
---------+---------+---------+---------+---------+---------+ 970
DCI01_0087_H05.b : atggtactttaccactggctcgtagaagcttacctacnttctctaaangatgatatggta
DCI01_0114_G12.b : tggtactttacaactggctcgaaaagcttacttaccttcccaaaaaaatgattttgaacc
AMP01_0054_E07.b : catcccatggtactttaccaactggctcgtagaagctttacttaccttctctagaaagat
AMP01_0089_B03.b : CCAATGGTACTTTACCAACTGGCTCGTAGAAGCTTACCTTACCTTCTCTAGAAAGATGAT
20110601C-004957 : TATGTAAGCCATATAAGCATAGACTTTTCCTCCATATTCTTAGTGCCTCCTTTAGTACCT
---------+---------+---------+---------+---------+---------+ 1030
DCI01_0087_H05.b : ggcatatagcctaaactttccccaaaanctaaggccccctttgtactcccccgaataaaa
DCI01_0114_G12.b : cataaagccaaaacttttcctcaaaacttaaggccccttaaaaccccctcaaattaaaaa
AMP01_0054_E07.b : gattatgtaagccatataagcatagacttttcctcctaatcctagtgcctcctttagtac
AMP01_0089_B03.b : TATGTAAGCCATATAAGCATAGACTTTTCCTCCATATTCTTAGTGCCTCCTTTAGTACCT
20110601C-004957 : CACTCAGATTAAAAAATAAATGGTTATTCTTTAGCATAGATATTCTGCTCCTCACCAANT
---------+---------+---------+---------+---------+---------+ 1090
DCI01_0087_H05.b : aaaaatggtatccttacacaaaaatctgctctcaaccaagagattgggttaaaaacgggc
DCI01_0114_G12.b : aaaaggtattttttacaaaaaatttcgtccccacaaagaaattgttttaaaacggcccga
AMP01_0054_E07.b : tccctcagattaaaaataaaatggttattctttaacatagatattctgctcctcaacaaa
AMP01_0089_B03.b : CACTCAGATTAAAAAATAAATGGTTATTCTTTAGCATAGATATTCTGCTCCTCACCAANT
20110601C-004957 : GNAANGTTGTGTAGAAACTGAGCTGAGTAATTTNCATAGTACATCTCCTGCACACATCTT
---------+---------+---------+---------+---------+---------+ 1150
DCI01_0087_H05.b : tgaaaaattctcagaaaatccccgcacaactttttccccaaagtttgtacggggtgtgat
DCI01_0114_G12.b : aaatttttcggaaattccgcgccacccttttt
AMP01_0054_E07.b : tgaagtttgtggtaaaaaactgagctgattaatttcttaggtaaatctcccgcaacactc
AMP01_0089_B03.b : GNAANGTTGTGTAGAAACTGAGCTGAGTAATTTNCATAGTACATCTCCTGCACACATCTT
20110601C-004957 : ATCCTCAGAAAGTTT.............................................
---------+---------+---------+---------+---------+---------+ 1165
DCI01_0087_H05.b : ttaatttttaaggggcccttccggggagatccccccggggcttggggcccctcccccccc
DCI01_0114_G12.b :
AMP01_0054_E07.b : tttatcctcaaaagtttttggtacgggtggtttgggtatttatttcttttagggctgccc
AMP01_0089_B03.b : ATCCTCAGAAAGTTTtgggtacggntgttnggnntattnattcttttaggctgcacttcg
20110601C-004957 : ............................................................
---------+---------+---------+---------+---------+---------+ 1165
DCI01_0087_H05.b : ccccccccaatgtgggttgttttgttgccctc
DCI01_0114_G12.b :
AMP01_0054_E07.b : ttccgggggggaaaatcccagctaggggtctatttggagtgggnttgcancccaagccaa
AMP01_0089_B03.b : tgtgtggaagttcccagctagggntctattgagctgcantgcggncacancaaccacaaa
20110601C-004957 : ............................................................
---------+---------+---------+---------+---------+---------+ 1165
DCI01_0087_H05.b :
DCI01_0114_G12.b :
AMP01_0054_E07.b : gcccanccaaaatttggggatctgatt
AMP01_0089_B03.b : atggggactgagcctgtcgtgactgcccccgttcagcaaactgatcttaccctgacgggc
20110601C-004957 : ............................................................
---------+---------+---------+---------+---------+---------+ 1165
DCI01_0087_H05.b :
DCI01_0114_G12.b :
AMP01_0054_E07.b :
AMP01_0089_B03.b : cgatttaccaggccccaggaacaatgggtcttcgctaccaagggaacccgttgtttttta
20110601C-004957 : ............................................................
---------+---------+---------+---------+---------+---------+ 1165
DCI01_0087_H05.b :
DCI01_0114_G12.b :
AMP01_0054_E07.b :
AMP01_0089_B03.b : aaaattgaacggatttcctctcttttcggccttccttatgaaccttccgtcatggcg