[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-006989

Length: 1,113

Sequence [FASTA format sequence]
TAAGACTCAC CTCATCAGGC CCTGCTGCAG TGGGAGCAGG GAGAGTAGCA GTGGTAGGGG
CAGCATGCTG GCCAGGGGGC TTGCCCTCCG CTCAGTCCTG GTCAAAGGCT GCCAGCCCTT
CCTGAGTGCC CCTCGGGAGT GCCCAGGGCA TCCCAGGGTG GGCACTGGAG AGGGAGCATG
CATCTCCACT AAAACCCCTC GCCCCTTCAG TGAGATCCCC TCTCCTGGTG ACAATGGCTG
GATTAACCTG TACCGTTTCT GGAAGGAGAA GGGCACACAG AAAATCCACT ATCACCATGT
CCAGAACTTC CAGAAGTATG GTCCCATTTA CAGGGAGAAG CTCGGCAACT TGGAATCTGT
TTATATCATC GACCCTGAAG ATGTGGCCCT TCTCTTTAAG TTCGAAGGAC CCAACCCAGA
ACGATACAAC ATCCCGCCCT GGGTTGCCTA TCACCAGCAT TACCAGAAGC CTGTTGGGGT
CCTGCTGAAG AAGTCAGGAG CCTGGAAGAA AGACCGGTTG GTCCTGAACA CGGAGGTAAT
GGCTCCAGAG GCCATAAAGA ACTTCATCCC CCTACTGGAC ACAGTGTCTC AGGACTTCGT
CGGCGTCCTG CACAGGCGCA TCAAGCAGCA GGGTTCTGGA AAGTTCTCAG GTGACATCAG
GGAAGACCTG TTTCGCTTCG CCTTTGAGTC CATCACCAAT GTCATATTTG GAGAGCGCCT
GGGGATGCTG GAGGAAATAG TGGACCCTGA AGCTCAGAAG TTCATTGATG CTGTCTACCA
GATGTTCCAC ACTAGTGTCC CCATGCTCAA TCTCCCCCCT GACCTGTTCC GTCTGTTCAG
GACCAAGACC TGGAGGGACC ATGTAGCCGC ATGGGACACT ATTTTCAAAT AAGCTGAAAA
ATACACCCAG AACTTCTACT GGGACCTGAA ACGGAAAAGA AAATTTAACA TTTACCAGGC
ATCCTCTACC GCCTCCCGGG AAATGACAAG CTGCTCTCAA AAAATGTTAA GGCCAATGTT
ACCAAAATGC TGGCCAGGGG GTGTAGACAC GACATCCCTG ACTCTGCCAT GGCACTTGTA
TGAAATGGCA CCTACCCTGA ATGTGCAGGA AAT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP11A1cholesterol side-chain cleavage enzyme, mitochondrial isoform a precursor [Homo sapiens]. 530e-151O
Contig/Assembly ProteinCYP11A1cholesterol side-chain cleavage enzyme, mitochondrial isoform b [Homo sapiens]. 2616e-70O
Contig/Assembly ProteinCYP11B1cytochrome P450 11B1, mitochondrial isoform 2 precursor [Homo sapiens]. 1887e-48O
Contig/Assembly ProteinCYP11B1cytochrome P450 11B1, mitochondrial isoform 1 precursor [Homo sapiens]. 1887e-48O
Contig/Assembly ProteinCYP11B2cytochrome P450 11B2, mitochondrial precursor [Homo sapiens]. 1856e-47O
Contig/Assembly ProteinCYP24A11,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial isoform 2 precursor [Homo sapiens]. 1341e-31O
Contig/Assembly ProteinCYP24A11,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial isoform 1 precursor [Homo sapiens]. 1341e-31O
Contig/Assembly ProteinCYP27B125-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Homo sapiens]. 1141e-25O
Contig/Assembly ProteinCYP27A1sterol 26-hydroxylase, mitochondrial precursor [Homo sapiens]. 89.46e-18O
Contig/Assembly ProteinCYP27C1cytochrome P450 27C1 [Homo sapiens]. 67.82e-11O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCyp11a1cholesterol side-chain cleavage enzyme, mitochondrial precursor [Mus musculus]. 502e-142O
Contig/Assembly ProteinCyp11b2cytochrome P450 11B2, mitochondrial [Mus musculus]. 1887e-48O
Contig/Assembly ProteinCyp11b1cytochrome P450, family 11, subfamily b, polypeptide 1 [Mus musculus]. 1802e-45O
Contig/Assembly ProteinCyp24a11,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial precursor [Mus musculus]. 1387e-33O
Contig/Assembly ProteinCyp27b125-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Mus musculus]. 1163e-26O
Contig/Assembly ProteinCyp27a1sterol 26-hydroxylase, mitochondrial [Mus musculus]. 97.12e-20O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC478365PREDICTED: similar to Cytochrome P450 11A1, mitochondrial precursor (CYPXIA1) (P450(scc)) (Cholesterol side-chain cleavage enzyme) (Cholesterol desmolase) [Canis familiaris]. 552e-157O
Contig/Assembly ProteinLOC482071PREDICTED: similar to Cytochrome P450 11B2, mitochondrial precursor (CYPXIB2) (P-450Aldo) (Aldosterone synthase) (ALDOS) (Aldosterone-synthesizing enzyme) (Steroid 18-hydroxylase) (P-450C18) [Canis familiaris]. 1772e-44
Contig/Assembly ProteinLOC485935PREDICTED: similar to Cytochrome P450 24A1, mitochondrial precursor (P450-CC24) (Vitamin D(3) 24-hydroxylase) (1,25-dihydroxyvitamin D(3) 24-hydroxylase) (24-OHase) [Canis familiaris]. 1294e-30O
Contig/Assembly ProteinLOC481133PREDICTED: similar to 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial precursor (Calcidiol 1-monooxygenase) (25-OHD-1 alpha-hydroxylase) (25-hydroxyvitamin D(3) 1-alpha-hydroxylase) (VD3 1A hydroxylase) (P450C1 alpha) (P450VD1-alpha) [Canis familiaris]. 1272e-29O
Contig/Assembly ProteinLOC483869PREDICTED: similar to cytochrome P450, family 27, subfamily b, polypeptide 1 [Canis familiaris]. 997e-21O
Contig/Assembly ProteinLOC610489PREDICTED: similar to Cytochrome P450 27, mitochondrial precursor (Cytochrome P-450C27/25) (Sterol 26-hydroxylase) (Sterol 27-hydroxylase) (Vitamin D(3) 25-hydroxylase) (5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol 27-hydroxylase) [Canis familiaris]. 97.13e-20O
Contig/Assembly ProteinLOC608494PREDICTED: similar to cytochrome P450, subfamily XIB polypeptide 2 precursor, partial [Canis familiaris]. 60.82e-09
Contig/Assembly ProteinLOC609093PREDICTED: similar to cytochrome P450, family 11, subfamily B, polypeptide 1 isoform 1 precursor [Canis familiaris]. 58.51e-08


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP11A1cholesterol side-chain cleavage enzyme, mitochondrial precursor [Bos taurus]. 535e-152O
Contig/Assembly ProteinCYP11B2cytochrome P450 11B1, mitochondrial precursor [Bos taurus]. 1794e-45O
Contig/Assembly ProteinLOC540080PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide 1-like isoform 1 [Bos taurus]. 1319e-31O
Contig/Assembly ProteinLOC540080PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide 1-like isoform 2 [Bos taurus]. 1319e-31O
Contig/Assembly ProteinCYP24A11,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial [Bos taurus]. 1302e-30O
Contig/Assembly ProteinLOC540080PREDICTED: cytochrome P450, family 24, subfamily A, polypeptide 1-like isoform 2 [Bos taurus]. 1302e-30O
Contig/Assembly ProteinCYP27B125-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Bos taurus]. 1295e-30O
Contig/Assembly ProteinCYP27B1PREDICTED: cytochrome P450, family 27, subfamily B, polypeptide 1 [Bos taurus]. 1295e-30O
Contig/Assembly ProteinLOC617338PREDICTED: FLJ16008 protein-like [Bos taurus]. 1055e-23O
Contig/Assembly ProteinLOC617338PREDICTED: FLJ16008 protein-like [Bos taurus]. 1055e-23O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP11A1cholesterol side-chain cleavage enzyme, mitochondrial precursor [Sus scrofa]. 6470.0O
Contig/Assembly ProteinCYP24A11,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial [Sus scrofa]. 1247e-29O
Contig/Assembly ProteinCYP27B125-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Sus scrofa]. 1232e-28O
Contig/Assembly ProteinCYP27A1sterol 26-hydroxylase, mitochondrial precursor [Sus scrofa]. 88.27e-18O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010076D03ADR01_0076_D03.bDB788243 
OVRM10201G06OVRM1_0201_G06.bBP460872 
OVRT10121D01OVRT1_0121_D01.bHX236501 AK400681
TES010024E11TES01_0024_E11.b  
TES010037A01TES01_0037_A01.bCJ032414 
TES010042C06TES01_0042_C06.bCJ032707 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
214A200.333WSGAA/E
G310.667GAG/E


Alignment:      TOP

20110601C-006989 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRT1_0121_D01.b : ncccttagctgaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0201_G06.b : agttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0076_D03.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxxxxx
TES01_0042_C06.b : ctgagg
TES01_0024_E11.b : gctgtgg
TES01_0037_A01.b : gcgtt
20110601C-006989 : ...TAAGACTCACCTCATCAGGCCCTGCTGCAGTGGGAGCAGGGAGAGTAGCAGTGGTAG
---------+---------+---------+---------+---------+---------+ 57
OVRT1_0121_D01.b : xxxTAAGACTCACCTCATCAGGCCCTGCTGCAGTGGGAGCAGGGAGAGTAGCAGTGGTAG
OVRM1_0201_G06.b : xxxxxAGACTCACCTCATCAGGCCCTGCTGCAGTGGGAGCAGGGAGAGTAGCAGTGGTAG
ADR01_0076_D03.b : xxxxxxGACTCACCTCATCACGCTCTGCTGCAGTGGGAGCAGGGAGAGTAGCAGTGGTAG
TES01_0042_C06.b : ctctggcgacTCCCTCATCAGGCCCTGCTGCAGTGGGAGCAAGGAGAGTAGCACTGGTAG
TES01_0024_E11.b : ctactggagatcCCTCATCAGGCCCTGCTGCAGTGGGAGCAGGGAGAGTAGCAGTGGTAG
TES01_0037_A01.b : ggctatgagatcaCTCATCAGGCCCTGCTGCAGTGGGAGCAGGGAGAGTAGCAGTGGTAG
20110601C-006989 : GGGCAGCATGCTGGCCAGGGGGCTTGCCCTCCGCTCAGTCCTGGTCAAAGGCTGCCAGCC
---------+---------+---------+---------+---------+---------+ 117
OVRT1_0121_D01.b : GGGCAGCATGCTGGCCAGGGGGCTTGCCCTCCGCTCAGTCCTGGTCAAAGGCTGCCAGCC
OVRM1_0201_G06.b : GGGCAGCATGCTGGCCAGGGGGCTTGCCCTCCGCTCAGTCCTGGTCAAAGGCTGCCAGCC
ADR01_0076_D03.b : GGGCAGCATGCTGGCCAGGGGGCTTGCCCTCCGCTCAGTCCTGGTCAAAGGCTGCCAGCC
TES01_0042_C06.b : GGGCAGCATGCTGGCCAGGGGGCTTGCCCTCCGCTCAGTCCTGGTCAAAGGCTGCCAGCC
TES01_0024_E11.b : GGGCAGCATGCTGGCCAGGGGGCTTGCCCTCCGCTCAGTCCTGGTCAAAGGCTGCCAGCC
TES01_0037_A01.b : GGGCAGCATGCTGGCCAGGGGGCTTGCCCTCCGCTCAGTCCTGGTCAAAGGCTGCCAGCC
20110601C-006989 : CTTCCTGAGTGCCCCTCGGGAGTGCCCAGGGCATCCCAGGGTGGGCACTGGAGAGGGAGC
---------+---------+---------+---------+---------+---------+ 177
OVRT1_0121_D01.b : CTTCCTGAGTGCCCCTCGGGAGTGCCCAGGGCATCCCAGGGTGGGCACTGGAGAGGGAGC
OVRM1_0201_G06.b : CTTCCTGAGTGCCCCTCGGGAGTGCCCAGGACATCCCAGGGTGGGCACTGGAGAGGGAGC
ADR01_0076_D03.b : CTTCCTGAGTGCCCCTCGGGAGTGCCCAGGGCATCCCAGGGTGGGCACTGGAGAGGGAGC
TES01_0042_C06.b : CTTCCTGAGTGCCCCTCGGGAGTGCCCAGGGCATCCCGGGGTGGGCACTGGAGAGGGAGC
TES01_0024_E11.b : CTTCCTGAGTGCCCCTCGGGAGTGCCCAGGGCATCCCAGGGTGGGCACTGGAGAGGGAGC
TES01_0037_A01.b : CTTCCTGAGTGCCCCTCGGGAGTGCCCAGGGCATCCCAGGGTGGGCACTGGAGAGGGAGC
20110601C-006989 : ATGCATCTCCACTAAAACCCCTCGCCCCTTCAGTGAGATCCCCTCTCCTGGTGACAATGG
---------+---------+---------+---------+---------+---------+ 237
OVRT1_0121_D01.b : ATGCATCTCCACTAAAACCCCTCGCCCCTTCAGTGAGATCCCCTCTCCTGGTGACAATGG
OVRM1_0201_G06.b : ATGCATCTCCACTAAAACCCCTCGCCCCTTCAGTGAGATCCCCTCTCCTGGTGACAATGG
ADR01_0076_D03.b : ATGCATCTCCACTAAAACCCCTCGCCCCTTCAGTGAGATCCCCTCTCCTGGTGACAATGG
TES01_0042_C06.b : ATGCATCTCCACTAAAACCCCTCGCCCCTTCAGTGAAATCCCCTCTCCTGGTGACAATGG
TES01_0024_E11.b : ATGCATCTCCACTAAAACCCCTCGCCCCTTCAGTGAGATCCCCTCTCCTGGTGACAATGG
TES01_0037_A01.b : ATGCATCTCCACTAAAACCCCTCGCCCCTTCAGTGAAATCCCCTCTCCTGGTGACAATGG
20110601C-006989 : CTGGATTAACCTGTACCGTTTCTGGAAGGAGAAGGGCACACAGAAAATCCACTATCACCA
---------+---------+---------+---------+---------+---------+ 297
OVRT1_0121_D01.b : CTGGATTAACCTGTACCGTTTCTGGAAGGAGAAGGGCACACAGAAAATCCACTATCACCA
OVRM1_0201_G06.b : CTGGATTAACCTGTACCGTTTCTGGAAGGAGAAGGGCACACAGAAAATCCACTATCACCA
ADR01_0076_D03.b : CTGGATTAACCTGTACCGTTTCTGGAAGGAGAAGGGCACACAGAAAATCCACTATCACCA
TES01_0042_C06.b : CTGGATTAACCTGTACCGTTTCTGGAAGGAGAAGGGCACACAGAAAATCCACTATCACCA
TES01_0024_E11.b : CTGGATTAACCTGTACCGTTTCTGGAAGGAGAAGGGCACACAGAAAATCCACTATCACCA
TES01_0037_A01.b : CTGGATTAACCTGTACCGTTTCTGGAAGGAGAAGGGCACACAGAAAATCCACTATCACCA
20110601C-006989 : TGTCCAGAACTTCCAGAAGTATGGTCCCATTTACAGGGAGAAGCTCGGCAACTTGGAATC
---------+---------+---------+---------+---------+---------+ 357
OVRT1_0121_D01.b : TGTCCAGAACTTCCAGAAGTATGGTCCCATTTACAGGGAGAAGCTCGGCAACTTGGAATC
OVRM1_0201_G06.b : TGTCCAGAACTTCCAGAAGTATGGTCCCATTTACAGGGAGAAGCTCGGCAACTTGGAATC
ADR01_0076_D03.b : TGTCCAGAACTTCCAGAAGTATGGTCCCATTTACAGGGAGAAGCTCGGCAACTTGGAATC
TES01_0042_C06.b : TGTCCAGAACTTCCAGAAGTATGGTCCCATTTACAGGGAGAAGCTCGGCAACTTGGAATC
TES01_0024_E11.b : TGTCCAGAACTTCCAGAAGTATGGTCCCATTTACAGGGAGAAGCTCGGCAACTTGGAATC
TES01_0037_A01.b : TGTCCAGAACTTCCAGAAGTATGGTCCCATTTACAGGGAGAAGCTCGGCAACTTGGAATC
20110601C-006989 : TGTTTATATCATCGACCCTGAAGATGTGGCCCTTCTCTTTAAGTTCGAAGGACCCAACCC
---------+---------+---------+---------+---------+---------+ 417
OVRT1_0121_D01.b : TGTTTATATCATCGACCCTGAAGATGTGGCCCTTCTCTTTAAGTTCGAAGGACCCAACCC
OVRM1_0201_G06.b : TGTTTATATCATCGACCCTGAAGATGTGGCCCTTCTCTTTAAGTTCGAAGGACCCAACCC
ADR01_0076_D03.b : TGTTTATATCATCGACCCTGAAGATGTGGCCCTTCTCTTTAAGTTCGAAGGACCCAACCC
TES01_0042_C06.b : TGTTTATATCATCGACCCTGAAGATGTGGCCCTTCTCTTTAAGTTCGAAGGACCCAACCC
TES01_0024_E11.b : TGTTTATATCATCGACCCTGAAGATGTGGCCCTTCTCTTTAAGTTCGAAGGACCCAACCC
TES01_0037_A01.b : TGTTTATATCATCGACCCTGAAGATGTGGCCCTTCTCTTTAAGTTCGAAGGACCCAACCC
20110601C-006989 : AGAACGATACAACATCCCGCCCTGGGTTGCCTATCACCAGCATTACCAGAAGCCTGTTGG
---------+---------+---------+---------+---------+---------+ 477
OVRT1_0121_D01.b : AGAACGATACAACATCCCGCCCTGGGTTGCCTATCACCAGCATTACCAGAAGCCTGTTGG
OVRM1_0201_G06.b : AGAACGATACAACATCCCGCCCTGGGTTGCCTATCACCAGCATTACCAGAAGCCTGTTGG
ADR01_0076_D03.b : AGAACGATACAACATCCCGCCCTGGGTTGCCTATCACCAGCATTACCAGAAGCCTGTTGG
TES01_0042_C06.b : AGAACGATACAACATCCCGCCCTGGGTTGCCTATCACCAGCATTACCAGAAGCCTGTTGG
TES01_0024_E11.b : AGAACGATACAACATCCCGCCCTGGGTTGCCTATCACCAGCATTACCAGAAGCCTGTTGG
TES01_0037_A01.b : AGAACGATACAACATCCCGCCCTGGGTTGCCTATCACCAGCATTACCAGAAGCCTGTTGG
20110601C-006989 : GGTCCTGCTGAAGAAGTCAGGAGCCTGGAAGAAAGACCGGTTGGTCCTGAACACGGAGGT
---------+---------+---------+---------+---------+---------+ 537
OVRT1_0121_D01.b : GGTCCTGCTGAAGAAGTCAGGAGCCTGGAAGAAAGACCGGTTGGTCCTGAACACGGAGGT
OVRM1_0201_G06.b : GGTCCTGCTGAAGAAGTCAGGAGCCTGGAAGAAAGACCGGTTGGTCCTGAACACGGAGGT
ADR01_0076_D03.b : GGTCCTGCTGAAGAAGTCAGGAGCCTGGAAGAAAGACCGGTTGGTCCTGAACACGGAGGT
TES01_0042_C06.b : GGTCCTGCTGAAGAAGTCAGGAGCCTGGAAGAAAGACCGGTTGGTCCTGAACACGGAGGT
TES01_0024_E11.b : GGTCCTGCTGAAGAAGTCAGGAGCCTGGAAGAAAGACCGGTTGGTCCTGAACACGGAGGT
TES01_0037_A01.b : GGTCCTGCTGAAGAAGTCAGGAGCCTGGAAGAAAGACCGGTTGGTCCTGAACACGGAGGT
20110601C-006989 : AATGGCTCCAGAGGCCATAAAGAACTTCATCCCCCTACTGGACACAGTGTCTCAGGACTT
---------+---------+---------+---------+---------+---------+ 597
OVRT1_0121_D01.b : AATGGCTCCAGAGGCCATAAAGAACTTCATCCCCCTACTGGACACAGTGTCTCAGGACTT
OVRM1_0201_G06.b : AATGGCTCCAGAGGCCATAAAGAACTTCATCCCCCTACTGGACACAGTGTCTCAGGACTT
ADR01_0076_D03.b : AATGGCTCCAGAGGCCATAAAGAACTTCATCCCCCTACTGGACACAGTGTCTCAGGACTT
TES01_0042_C06.b : AATGGCTCCAGAGGCCATAAAGAACTTCATCCCCCTACTGGACACAGTGTCTCAGGACTT
TES01_0024_E11.b : AATGGCTCCAGAGGCCATAAAGAACTTCATCCCCCTACTGGACACAGTGTCTCAGGACTT
TES01_0037_A01.b : AATGGCTCCAGAGGCCATAAAGAACTTCATCCCCCTACTGGACACAGTGTCTCAGGACTT
20110601C-006989 : CGTCGGCGTCCTGCACAGGCGCATCAAGCAGCAGGGTTCTGGAAAGTTCTCAGGTGACAT
---------+---------+---------+---------+---------+---------+ 657
OVRT1_0121_D01.b : CGTCGGCGTCCTGCACAGGCGCATCAAGCAGCAGGGTTCTGGAAAGTTCTCAGGTGACAT
OVRM1_0201_G06.b : CGTCGGCGTCCTGCACAGGCGCATCAAGCAGCAGGGTTCTGGAAAGTTCTCANGTGACAT
ADR01_0076_D03.b : CGTCGGCGTCCTGCACAGGCGCATCAAGCAGCAGGGTTCTGGAAAGTTCTCAGGTGACAT
TES01_0042_C06.b : CGTCGGCGTCCTGCACAGGCGCATCAAGCAGCAGGGTTCTGGAAAGTTCTCAGGTGACAT
TES01_0024_E11.b : CGTCGGCGTCCTGCACAGGCGCATCAAGCAGCAGGGTTCTGGAAAGTTCTCAGGTGACAT
TES01_0037_A01.b : CGTCGGCGTCCTGCACAGGCGCATCAAGCAGCAGGGTTCTGGAAAGTTCTCAGGTGACAT
20110601C-006989 : CAGGGAAGACCTGTTTCGCTTCGCCTTTGAGTCCATCACCAATGTCATATTTGGAGAGCG
---------+---------+---------+---------+---------+---------+ 717
OVRT1_0121_D01.b : CAGGGAAGACCTGTTTCGCTTCGCCTTTGAGTCCATCACCAATGTCATATTTGGAGAGCG
OVRM1_0201_G06.b : CATGGAAGACCTGTTTCGCTTCGCCTTTGAGTCCATCNACAATGTCATATTTGGAGAGCG
ADR01_0076_D03.b : CAGGGAAGACCTGTTTCGCTTCGCCTTTGAGTCCATCACCAATGTCATATTTGGAGAGCG
TES01_0042_C06.b : CANGGAAGACCTGTTTCGCTTCGCCTTTGAGTCCATCACCCATGTCATATTTGGAGAACG
TES01_0024_E11.b : CANGGAAGACCTGTTTCGCTTCGCCTTTGAGTCCATCACCAATGTCATATTTGGAGAGCG
TES01_0037_A01.b : CAGGGAAGACCTGTTTCGCTTCGCCTTTGAGTCCATCACCAATGTCATATTTGGAGAGCG
20110601C-006989 : CCTGGGGATGCTGGAGGAAATAGTGGACCCTGAAGCTCAGAAGTTCATTGATGCTGTCTA
---------+---------+---------+---------+---------+---------+ 777
OVRT1_0121_D01.b : CCTGGGGATGCTGGAGGAAATAGTGGACCCTGANGCTCAGAAGTTCATTGATGCTGTCTA
OVRM1_0201_G06.b : CCTGGNGATGCTGGAGGAAATAGTGGACCCCTGAGGCCAGAAAGTCATTGATGCTGTCT
ADR01_0076_D03.b : CCTGGGGATGCTGGAGGAAATAGTGGACCCTGAGGCTCAGAAGTTCATTGATGCTGTCTA
TES01_0042_C06.b : CCTGGGGATGCTGGATGAAATAGTGGACCCTGAAGCTCAGAAATTCATTGATGCTGTCTA
TES01_0024_E11.b : CCTGGGGATGCTGGAGGAAATAGTGGACCCTGAGGCTCAGAAGTTCATTGATGCTGTCTA
TES01_0037_A01.b : CCTGGGGATGCTGGAGGAAATAGTGGACCCTGAGGCTCAGAAGTTCATTGATGCTGTCTA
20110601C-006989 : CCAGATGTTCCACACTAGTGTCCCCATGCTCAATCTCCCCCCTGACCTGTTCCGTCTGTT
---------+---------+---------+---------+---------+---------+ 837
OVRT1_0121_D01.b : CCAGATGTTCCACACTAGTGTCCCCATGCTCAATCTCCCCCCTGAACTGTTCCGTCTGTT
OVRM1_0201_G06.b :
ADR01_0076_D03.b : CCAGATGTTCCACACTAGTGTCCCCATGCTCAATCTCCCCCCTGACCTGTTCCGTCTGTT
TES01_0042_C06.b : CCAGATGTTCCACACTAGTGTCCCCATGCTCAATCTCCCCCCTGACCTGTTCCGTCTGTT
TES01_0024_E11.b : CCAGATGTTCCACACTAGTGTTCCCATGCTCAATCTCCCCCCTGAACTGTTCCGTCTGTT
TES01_0037_A01.b : CCAGATGTTCCACACTAGTGTCCCCATGCTCAATCTCCCCCCTGACCTGTTCCGTCTGTT
20110601C-006989 : CAGGACCAAGACCT*GGAGGGACCATGTAGCCGCATGGGACACTATTTTCAAATAAGCTG
---------+---------+---------+---------+---------+---------+ 896
OVRT1_0121_D01.b : CAGGACCAAGAACTGGAAGGGACCATGTAGCGGCATGGGACACTATTTTCATA*AAGCTG
OVRM1_0201_G06.b :
ADR01_0076_D03.b : CAGGACCAAGACCT*GGAGGGACCATGTAGCCGCATGGGACACTATTTTCAAATAAGCTG
TES01_0042_C06.b : CCAGACCCAAaacctggaggacccttgttaccccatgggacacttattttcataaaacct
TES01_0024_E11.b : CAGGAACCAGAACTTGGAGGGACCTTGTAacccccatgggaaactattttcaataaagcc
TES01_0037_A01.b : CAGGACCAAAACCT*GTATGGACCCTGTAACCGCATGGGACACTATTTTCCAATAAGCTG
20110601C-006989 : AAAAATACACCCAGAACT*TCTACTGGGACCTGAAACGGAAAAGAAAATTTAA*CATTTA
---------+---------+---------+---------+---------+---------+ 954
OVRT1_0121_D01.b : AAAAATACACCCAGAACTTTCTACGGGGACCTGAAACGGAAAAAAAAATTAAA*CAATTC
OVRM1_0201_G06.b :
ADR01_0076_D03.b : AAAAATACACCCAGAACT*TCTACTGGGACCTGAGNACGAAAAGAGAATTTTA*CATTNA
TES01_0042_C06.b : aaaaatacaccccgaacctccaacgggaacctgaaacgaaaaaaaaaatttaaatttttc
TES01_0024_E11.b : caaaaatacaccccgaactttctactgggaccctgaaacggaaaaaagaaatttaaaaat
TES01_0037_A01.b : AAAAATACACCCAAAACT*TCTACTGGGGACTGAGACGGAAAAGAAAATTTAACCATTTA
20110601C-006989 : C*CAGGCATCCTCTACCGCCTCCCGGGAAATGACAAGCTGCTCTCAAAAAATGTTAAGGC
---------+---------+---------+---------+---------+---------+ 1013
OVRT1_0121_D01.b : C*CAGGCATCCTCTACCCGCTTCGGGGAAAAGACAAGCCGCTCTCAAAGGATGTTAAGGC
OVRM1_0201_G06.b :
ADR01_0076_D03.b : NNCCAGCATCCTCTACCGCCTCCCTGGGAATGACNAGCTGCTCTCAGAAGATGTTAAGGC
TES01_0042_C06.b : cacgcatccctcaccgcctcccgggaaatgacaactgccccccaaagatgtttaggccca
TES01_0024_E11.b : ttcccccggattctctacccgccccctgggaatagccaaaccggccctcaaaaaaaattt
TES01_0037_A01.b : CCCAGGCATCCTCTACCGCCTCCTGGGAAATGACAAGCTGCTCTCAAAAAATGTTAAGGC
20110601C-006989 : CAATGTTACCAAAATGCTGGCCAGGGGGTGTAGACACGACATCCCTGACTCTGCCATGGC
---------+---------+---------+---------+---------+---------+ 1073
OVRT1_0121_D01.b : CAAggttccaaaatcctggcaggggggtaaacaccacttccagaacctccaagggccttg
OVRM1_0201_G06.b :
ADR01_0076_D03.b : CNATGTTACCGAGATGCTTGGCAGGGGGTGTAGACACGACATCCCTGACTCTGCCATGGC
TES01_0042_C06.b : tgtttaccaaaatcctggccgggggggtaaaaccaacttcctggacctcccatgggccct
TES01_0024_E11.b : aaggcaaaggtttcccaaattcctgcccggggggggtaaaaccaaaaatcccttaaacct
TES01_0037_A01.b : CAATGTTTCCAAAATGCTGGCCGGGGGTGgaaaaccaactccctggaatctgcatggccc
20110601C-006989 : ACTTGTATGAAATGGCACCTACCCTGAATGTGCAGGAAAT....................
---------+---------+---------+---------+---------+---------+ 1113
OVRT1_0121_D01.b : taaaaatagcaccttcccgaatttgcaaaaaacctccggaggagttcctaattcccggcc
OVRM1_0201_G06.b :
ADR01_0076_D03.b : ACTTGTATGAAATGGCACCTACCCTGAATGTGCAGGAAATctctccggaggaagtcctca
TES01_0042_C06.b : gttagaaagggcccttccccgaattgtccgaaaaatctcccggaaaaggttcctatgccc
TES01_0024_E11.b : tccaagggccctttttttaaaatggcccctaaacccttaatttgccaaaaaatcccctcg
TES01_0037_A01.b : ttgtatgaaaaggcccttacccgaatgttccggaaaaccttccggaagaagtcctcatgc
20110601C-006989 : ............................................................
---------+---------+---------+---------+---------+---------+ 1113
OVRT1_0121_D01.b : cgggccaggagaaacaaaaaaagtcgaattgtgcccctcccaacccgcttaagagaatgt
OVRM1_0201_G06.b :
ADR01_0076_D03.b : attcccggggccggcccaggaaaaacaaacaaagctgcattggtcccctctcnagctggc
TES01_0042_C06.b : cggcccggccccaggaaaacaaccaaaagtccccattgggcccccccctcaacttccctt
TES01_0024_E11.b : gaagaaggttctatatagccccgggcccccgggcccaaggaaaacacaacaaaaaagccg
TES01_0037_A01.b : ccggggcccggcccaggaaaaacaaaacagaagcgtgcaattggtccccccccccaagcc
20110601C-006989 : ............................................................
---------+---------+---------+---------+---------+---------+ 1113
OVRT1_0121_D01.b : gactccccccctccgggccccgaaaaaccgggaaagatgtgttctaaaaaaattctcccc
OVRM1_0201_G06.b :
ADR01_0076_D03.b : ttaaggaaacggactcccccctttccggaccgcaagaaacccggaagattggtttccaat
TES01_0042_C06.b : tagggaaatcggatatcccccccttcccggaacccggaaaaataccccggaaaaagggtt
TES01_0024_E11.b : catttgtgcccctcctccaagaccttgcttataggaaccactgttaaactccccccttct
TES01_0037_A01.b : tgcctttaaggaaacctgtgaactccccccattctcgtgacccttagaaaaaccatcgga
20110601C-006989 : ............................................................
---------+---------+---------+---------+---------+---------+ 1113
OVRT1_0121_D01.b : aaatgtaaaggggctttatgtgggaaacctcttttattataccaatttacaaccggtggg
OVRM1_0201_G06.b :
ADR01_0076_D03.b : aataatccgccacaatgtaaaaggggttttcctggccgaacacttttcttcccacgttta
TES01_0042_C06.b : ttccaaattcaatatcctcccaaaattgttaaatgggcctcttttcgagggggaaacccc
TES01_0024_E11.b : ctcgtgacccgggcaagaaaacaccgcgaaagaacatggttctctcaagaaataaataat
TES01_0037_A01.b : agaaactgggttcttcaaaataacagatttctgcccaaaacttgtgtacaagggcgcctc
20110601C-006989 : ............................................................
---------+---------+---------+---------+---------+---------+ 1113
OVRT1_0121_D01.b : tagagagacccctctcaatatttttgggnggcgattgtcggcaaataaa
OVRM1_0201_G06.b :
ADR01_0076_D03.b : cccccgggtgaaaaagaaaacaccaaaattcttgtgggggggggggggggggtgtctccc
TES01_0042_C06.b : cctttctcttatagggaggtttaccaccgggggg
TES01_0024_E11.b : cccc
TES01_0037_A01.b : ttcactcggcgg
20110601C-006989 : ............................................................
---------+---------+---------+---------+---------+---------+ 1113
OVRT1_0121_D01.b :
OVRM1_0201_G06.b :
ADR01_0076_D03.b : cctctcctctaattttttgtggggacccccccacccccccccc
TES01_0042_C06.b :
TES01_0024_E11.b :
TES01_0037_A01.b :