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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-007024

Length: 1,379

Sequence [FASTA format sequence]
CAAGCAAAGG ATGGTTTCTT GGGACTTCCA AAAACTTAAA ATCATGAAAC CTCTATTACT
GCTACTATTG TGTGTTTTTA TTATTAAGGC CCAAGCTGCC ATTGACTACG ATGAGGACGA
AGATGGCAGA CCTAAGGTTC ATGTGGATGC CCGTGGTCAT CGGCCCTATG ACAAGAGGAG
GGAAGAGGCT CCCAGCCTGA GACCTGTCGC CCCTCCCATC AGTGCAGGTG GCTATCAACC
TCGTCCAGCC AAAGTAGCTA TTGGCCAGAA GAAAGTGGAG AGAAAACCCC CTGATGCTGG
GGGCTGCCTG CATGCTGATC CGGACCTGGG TGTGTTGTGT CCTACAGGAT GTCAGTTGCA
AGATACTCTG CTGAAACAGG AAAGACCAAT CAAAACCAGT ATAGAAGAGC TGAATAGTAA
CATAGACTCT GTTTCCCAGT CCTCTTCTTC CACCTTTCAG TACATGACTC TGCTGAAACG
CCTGTGGAAA GACAGGCAGA AGCAAAGAAG AGATAATGAA AATGTCATAA TCACAAAAAA
ACAAGTTTGG AGGCCTTCTA CAGCAAATCC TCTGAGATAA AAGTGCACAT GCTGAATAGC
AAGAAGTACC CTGTGGCCCA TTTCACAGAC CCAACTTTGA AGGCCAAGGT GGGCCGACTG
CAGCTGTCTC ACAACCTGAG CTTGGTGATC CTGGTGCCCC AGACCTTGAA ACACCGTCTG
GAAGACATGG AGAAGGCCCT CAGTGCCCCT GTCTTCAAGG CTGTCATGAA TAAGCTGGAG
TCGACCAAGT TCTATCCCAC TCACTTCATG ATGCCTCGCA TCAAAATAAA GGGCAACCAG
GACATGCTGC CAATCATGGA GAAATTGGAA TTCTTTGACT TTACCTACGA CCTCAACCTG
TGTGGGCTGA CAGAGGACGC AGATCTGCAG GTTTCTACGA TGCAGCACCA GGCCATGCTA
GAGCTGATGG AGACGGGGGT GGAGGTGGCA GCAGCCTCGG CCTTCTCTGT GGCCCGCAGT
TTGCTGGTCT TTGAAGTGCA GCAGCCCTTC CTTTTCGTGC TCTGGGACCA GCATCACAAG
TTCCCTGTCT TCATGGGGCG GGTGTATGAC CCCAGGTCCT GAGACCTGCG GGGGGCCAAC
TAGGGCAAGT CCTTCCCCTC TGGCTTCAGC TCTCTTGGTT GCAGCTCTGG ACTTGCCCCC
AGCCACCTCC CGCCTCAGGT CTGCCCTCCA CCTGAAAGGC TCCCCGGGGG TCTGGTGAGG
GGACCTGCTT CTACCATCCC TTCCCTGTGA CTCTCTAAAG CACTTTTTGC AGCTTCCTCT
GGTACAAATA CAGCAGACTC TACAANTAAN AAAAAAAAAA AAAAAAAAAA AAAAAAAAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSERPING1plasma protease C1 inhibitor precursor [Homo sapiens]. 2794e-75
Contig/Assembly ProteinSERPING1plasma protease C1 inhibitor precursor [Homo sapiens]. 2794e-75
Contig/Assembly ProteinFGBfibrinogen beta chain isoform 1 preproprotein [Homo sapiens]. 2172e-56O
Contig/Assembly ProteinFGBfibrinogen beta chain isoform 2 preproprotein [Homo sapiens]. 63.93e-10O
Contig/Assembly ProteinSERPINF2alpha-2-antiplasmin isoform a precursor [Homo sapiens]. 62.87e-10
Contig/Assembly ProteinSERPINF2alpha-2-antiplasmin isoform a precursor [Homo sapiens]. 62.87e-10
Contig/Assembly ProteinSERPINF2alpha-2-antiplasmin isoform b precursor [Homo sapiens]. 62.87e-10
Contig/Assembly ProteinSERPINF1pigment epithelium-derived factor precursor [Homo sapiens]. 57.43e-08
Contig/Assembly ProteinSERPINA1alpha-1-antitrypsin precursor [Homo sapiens]. 53.54e-07
Contig/Assembly ProteinSERPINA1alpha-1-antitrypsin precursor [Homo sapiens]. 53.54e-07


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSerping1plasma protease C1 inhibitor precursor [Mus musculus]. 2488e-66
Contig/Assembly ProteinFgbfibrinogen beta chain precursor [Mus musculus]. 1956e-50O
Contig/Assembly ProteinSerpina3kserine protease inhibitor A3K precursor [Mus musculus]. 621e-09
Contig/Assembly ProteinSerpina1aalpha-1-antitrypsin 1-1 precursor [Mus musculus]. 61.61e-09
Contig/Assembly ProteinSerpina1ealpha-1-antitrypsin 1-5 precursor [Mus musculus]. 60.53e-09
Contig/Assembly ProteinSerpina1calpha-1-antitrypsin 1-3 [Mus musculus]. 60.53e-09
Contig/Assembly ProteinSerpina3mserine protease inhibitor A3M precursor [Mus musculus]. 59.75e-09
Contig/Assembly ProteinSerpina3iserine (or cysteine) peptidase inhibitor, clade A, member 3I [Mus musculus]. 59.75e-09
Contig/Assembly ProteinSerpina1balpha-1-antitrypsin 1-2 precursor [Mus musculus]. 59.75e-09
Contig/Assembly ProteinSerpina1dalpha-1-antitrypsin 1-4 precursor [Mus musculus]. 58.51e-08


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC475472PREDICTED: similar to Fibrinogen beta chain precursor isoform 2 [Canis familiaris]. 2188e-57O
Contig/Assembly ProteinLOC475472PREDICTED: similar to Fibrinogen beta chain precursor isoform 1 [Canis familiaris]. 2133e-55O
Contig/Assembly ProteinLOC475966PREDICTED: similar to Plasma protease C1 inhibitor precursor (C1 Inh) (C1Inh) [Canis familiaris]. 1573e-38
Contig/Assembly ProteinLOC611266PREDICTED: similar to Alpha-2-antiplasmin precursor (Alpha-2-plasmin inhibitor) (Alpha-2-PI) (Alpha-2-AP) [Canis familiaris]. 60.54e-09
Contig/Assembly ProteinLOC490840PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4 [Canis familiaris]. 55.51e-07
Contig/Assembly ProteinSERPINF1pigment epithelium-derived factor [Canis lupus familiaris]. 54.72e-07
Contig/Assembly ProteinLOC480425PREDICTED: similar to Alpha-1-antichymotrypsin precursor (ACT) [Canis familiaris]. 54.33e-07
Contig/Assembly ProteinSERPINA1serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Canis lupus familiaris]. 521e-06
Contig/Assembly ProteinLOC609110PREDICTED: similar to serine/cysteine proteinase inhibitor, clade I, member 2 isoform 1 [Canis familiaris]. 50.44e-06


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSERPING1factor XIIa inhibitor precursor [Bos taurus]. 2463e-65
Contig/Assembly ProteinFGBfibrinogen beta chain [Bos taurus]. 2341e-61O
Contig/Assembly ProteinSERPINF2alpha-2-antiplasmin precursor [Bos taurus]. 59.38e-09
Contig/Assembly ProteinSERPINF1pigment epithelium-derived factor precursor [Bos taurus]. 57.43e-08
Contig/Assembly ProteinSERPINA3serpin A3-5 [Bos taurus]. 56.65e-08
Contig/Assembly ProteinSERPINA3-6serpin A3-6 [Bos taurus]. 55.11e-07
Contig/Assembly ProteinSERPINA3-3serpin A3-3 [Bos taurus]. 55.11e-07
Contig/Assembly ProteinLOC100337325PREDICTED: pigment epithelium-derived factor-like [Bos taurus]. 55.11e-07O
Contig/Assembly ProteinLOC784932PREDICTED: endopin 2C-like [Bos taurus]. 54.72e-07
Contig/Assembly ProteinSERPINA3-1serpin A3-1 precursor [Bos taurus]. 54.33e-07


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSERPING1plasma protease C1 inhibitor [Sus scrofa]. 3554e-98
Contig/Assembly ProteinFGBPREDICTED: fibrinogen beta chain isoform 1 [Sus scrofa]. 3183e-87O
Contig/Assembly ProteinFGBPREDICTED: fibrinogen beta chain isoform 2 [Sus scrofa]. 2962e-80O
Contig/Assembly ProteinFGBPREDICTED: fibrinogen beta chain [Sus scrofa]. 1294e-30O
Contig/Assembly ProteinSERPINF1pigment epithelium-derived factor [Sus scrofa]. 58.21e-08
Contig/Assembly ProteinLOC100525254PREDICTED: alpha-2-antiplasmin-like, partial [Sus scrofa]. 58.21e-08O
Contig/Assembly ProteinLOC100156325PREDICTED: serpin A3-6 [Sus scrofa]. 55.85e-08
Contig/Assembly ProteinLOC100153899PREDICTED: serpin A3-8 [Sus scrofa]. 55.85e-08
Contig/Assembly ProteinLOC100621494PREDICTED: alpha-1-antitrypsin-like [Sus scrofa]. 55.19e-08
Contig/Assembly ProteinSERPINA1alpha-1-antitrypsin precursor [Sus scrofa]. 51.61e-06


Assembly Members: 5      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
KDN010056H12KDN01_0056_H12.bFS674934 
KDN010091D07KDN01_0091_D07.bFS677666 
LVRM10160H09LVRM1_0160_H09.bBP454433 
LVRM10181E02LVRM1_0181_E02.bCJ005539 AK233581
MLN010094G02MLN01_0094_G02.bCJ015227 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
847C110.500WNCTG/L
G200.500GTG/V


Alignment:      TOP

20110601C-007024 : ................................................CAAGCAAAGGAT
---------+---------+---------+---------+---------+---------+ 12
LVRM1_0181_E02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAGCAAAGGAT
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : GGTTTCTTGGGACTTCCAAAAACTTAAAATCATGAAACCTCTATTACTGCTACTATTGTG
---------+---------+---------+---------+---------+---------+ 72
LVRM1_0181_E02.b : GGTTTCTTGGGACTTCCAAAAACTTAAAATCATGAAACCTCTATTACTGCTACTATTGTG
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : TGTTTTTATTATTAAGGCCCAAGCTGCCATTGACTACGATGAGGACGAAGATGGCAGACC
---------+---------+---------+---------+---------+---------+ 132
LVRM1_0181_E02.b : TGTTTTTATTATTAAGGCCCAAGCTGCCATTGACTACGATGAGGACGAAGATGGCAGACC
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : TAAGGTTCATGTGGATGCCCGTGGTCATCGGCCCTATGACAAGAGGAGGGAAGAGGCTCC
---------+---------+---------+---------+---------+---------+ 192
LVRM1_0181_E02.b : TAAGGTTCATGTGGATGCCCGTGGTCATCGGCCCTATGACAAGAGGAGGGAAGAGGCTCC
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : CAGCCTGAGACCTGTCGCCCCTCCCATCAGTGCAGGTGGCTATCAACCTCGTCCAGCCAA
---------+---------+---------+---------+---------+---------+ 252
LVRM1_0181_E02.b : CAGCCTGAGACCTGTCGCCCCTCCCATCAGTGCAGGTGGCTATCAACCTCGTCCAGCCAA
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : AGTAGCTATTGGCCAGAAGAAAGTGGAGAGAAAACCCCCTGATGCTGGGGGCTGCCTGCA
---------+---------+---------+---------+---------+---------+ 312
LVRM1_0181_E02.b : AGTAGCTATTGGCCAGAAGAAAGTGGAGAGAAAACCCCCTGATGCTGGGGGCTGCCTGCA
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : TGCTGATCCGGACCTGGGTGTGTTGTGTCCTACAGGATGTCAGTTGCAAGATACTCTGCT
---------+---------+---------+---------+---------+---------+ 372
LVRM1_0181_E02.b : TGCTGATCCGGACCTGGGTGTGTTGTGTCCTACAGGATGTCAGTTGCAAGATACTCTGCT
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : GAAACAGGAAAGACCAATCAAAACCAGTATAGAAGAGCTGAATAGTAACATAGACTCTGT
---------+---------+---------+---------+---------+---------+ 432
LVRM1_0181_E02.b : GAAACAGGAAAGACCAATCAAAACCAGTATAGAAGAGCTGAATAGTAACATAGACTCTGT
LVRM1_0160_H09.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : TTCCCAGTCCTCTTCTTCCACCTTTCAGTACATGACTCTGCTGAAACGCCTGTGGAAAGA
---------+---------+---------+---------+---------+---------+ 492
LVRM1_0181_E02.b : TTCCCAGTCCTCTTCTTCCACCTTTCAGTACATGACTCTGCTGAAACGCCTGTGGAAAGA
LVRM1_0160_H09.b : xxxxxxxxxxxtcagctgctgaacagcctgccgtctgaaacccgccttgtcctcctcaat
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : CAGGCAGAAGCAAAGAAGAGATAATGAAAATGTCATAATCACAAAAAAACAAGTTTGGAG
---------+---------+---------+---------+---------+---------+ 552
LVRM1_0181_E02.b : CAGGCAGAAGCAAAGAAGAGATAATGAAAATGTCATAATCACAAAAAAACAAGTTTGGAG
LVRM1_0160_H09.b : gccatctacctgagtgccaagtggaaggtaatgttTAATCACAAAAAAACAAGTTTGGAG
MLN01_0094_G02.b : nnnggctagtactataacxxxxxxxxxxxxxxxxxx
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : GCCTTCTACAGCAAATCCTCTGAGATAAAAGTGCACATGCTGAATAGCAAGAAGTACCCT
---------+---------+---------+---------+---------+---------+ 612
LVRM1_0181_E02.b : GCCTTCTACAGCAAATCCTCTGAGATAAAAGTGCACATGCTGAATAGCAAGAAGTACCCT
LVRM1_0160_H09.b : GCCTTCTACAGCAAATCCTCTGAGATAAAAGTGCACATGCTGAATAGCAAGAAGTACCCT
MLN01_0094_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgTAGCAAGAAGTACCCT
KDN01_0056_H12.b :
KDN01_0091_D07.b :
20110601C-007024 : GTGGCCCATTTCACAGACCCAACTTTGAAGGCCAAGGTGGGCCGACTGCAGCTGTCTCAC
---------+---------+---------+---------+---------+---------+ 672
LVRM1_0181_E02.b : GTGGCCCATTTCACAGACCCAACTTTGAAGGCCAAGGTGGGCCGACTGCAGCTGTCTCAC
LVRM1_0160_H09.b : GTGGCCCATTTCACAGACCCAACTTTGAAGGCCAAGGTGGGCCGACTGCAGCTGTCTCAC
MLN01_0094_G02.b : GTGGCCCATTTCACAGACCCGACTTTGAAGGCCAAGGTGGGCCGACTGCAGCTGTCTCAC
KDN01_0056_H12.b : gttggctctggtc
KDN01_0091_D07.b : tttnncctgcggtggcacggtc
20110601C-007024 : AACCTGAGCTTGGTGATCCTGGTGCCCCAGACCTTGAAACACCGTCTGGAAGACATGGAG
---------+---------+---------+---------+---------+---------+ 732
LVRM1_0181_E02.b : AACCTGAGCTTGGTGATCCTGGTGCCCCAGACCTTGAAACACCGTCTGGAAa
LVRM1_0160_H09.b : AACCTGAGCTTGGTGATCCTGGTGCCCCAGACCTTGAAACACCGTCTGGAAGACATGGAG
MLN01_0094_G02.b : AACCTGAGCTTGGTGATCCTGGTGCCCCAGACCTTGAAACACCGTCTGGAAGACATGGAG
KDN01_0056_H12.b : cACCTGAGCTTGGTGATCCTGGTGCCCCAGACCTTGAAACACCGTCTGGAAGACATGGAG
KDN01_0091_D07.b : cACCTGAGCTTGGTGATCCTGGTGCCCCAGACCTTGAAACACCGTCTGGAAGACATGGAG
20110601C-007024 : AAGGCCCTCAGTGCCCCTGTCTTCAAGGCTGTCATGAATAAGCTGGAGTCGACCAAGTTC
---------+---------+---------+---------+---------+---------+ 792
LVRM1_0181_E02.b :
LVRM1_0160_H09.b : AAGGCCCTCAGTGCCCCTGTCTTCAAGGCTGTCATGAATAAGCTGGAGTCGACCAAGTTC
MLN01_0094_G02.b : AAGGCCCTCAGTGCCCCTGTCTTCAAGGCTGTCATGAATAAGCTGGAGTCGACCAAGTTC
KDN01_0056_H12.b : AAGGCCCTCAGTGCCCCTGTCTTCAAGGCTGTCATGAATAAGCTGGAGTCGACCAAGTTC
KDN01_0091_D07.b : AAGGCCCTCAGTGCCCCTGTCTTCAAGGCTGTCATGAATAAGCTGGAGTCGACCAAGTTC
20110601C-007024 : TATCCCACTCACTTCATGATGCCTCGCATCAAAATAAAGGGCAACCAGGACATGCTGCCA
---------+---------+---------+---------+---------+---------+ 852
LVRM1_0181_E02.b :
LVRM1_0160_H09.b : TATCCCACTCACTTCATGATGCCTCGCATCAAAATAAAGGGCAACCAGGACATGCTGCCA
MLN01_0094_G02.b : TATCCCACTCACTTCATGATGCCTCGCATCAAAATAAAGGGCAACCAGGACATGCTGCCA
KDN01_0056_H12.b : TATCCCACTCACTTCATGATGCCTCGCATCAAAATAAAGGGCAACCAGGACATGGTGCCA
KDN01_0091_D07.b : TATCCCACTCACTTCATGATGCCTCGCATCAAAATAAAGGGCAACCAGGACATGGTGCCA
20110601C-007024 : ATCATGGAGAAATTGGAATTCTTTGACTTTACCTACGACCTCAACCTGTGTGGGCTGACA
---------+---------+---------+---------+---------+---------+ 912
LVRM1_0181_E02.b :
LVRM1_0160_H09.b : ATCATGGAGAAATTGGAATTCTTTGACTTTACCTACGACCTCAACCTGTGTGGGCTGACA
MLN01_0094_G02.b : ATCATGGAGAAATTGGAATTCTTTGACTTTACCTACGACCTCAACCTGTGTGGGCTGACA
KDN01_0056_H12.b : ATCATGGAGAAATTGGAATTCTTTGACTTTACCTACGACCTCAACCTGTGTGGGCTGACA
KDN01_0091_D07.b : ATCATGGAGAAATTGGAATTCTTTGACTTTACCTACGACCTCAACCTGTGTGGGCTGACA
20110601C-007024 : GAGGACGCAGATCTGCAGGTTTCTACGATGCAGCACCAGGCCATGCTAGAGCTGATGGAG
---------+---------+---------+---------+---------+---------+ 972
LVRM1_0181_E02.b :
LVRM1_0160_H09.b : GAGGACGCAGATCTGCAGGTTTCTACGATGCAGCACCAGGCCATGCTAGAGCTGATGGAG
MLN01_0094_G02.b : GAGGACGCAGATCTGCAGGTTTCTACGATGCAGCACCAGGCCATGCTAGAGCTGATGGAG
KDN01_0056_H12.b : GAGGACGCAGATCTGCAGGTTTCTACGATGCAGCACCAGGCCATGCTAGAGCTGATGGAG
KDN01_0091_D07.b : GAGGACGCAGATCTGCAGGTTTCTACGATGCAGCACCAGGCCATGCTAGAGCTGATGGAG
20110601C-007024 : ACGGGGGTGGAGGTGGCAGCAGCCTCGGCCTTCTCTGTGGCCCGCAGTTTGCTGGTCTTT
---------+---------+---------+---------+---------+---------+ 1032
LVRM1_0181_E02.b :
LVRM1_0160_H09.b : ACGGGGGTGGAGGTGGCAGCAGCCTCGGCCTTCTCTGTGGCCCGCAGTTTGCTGGTCTTT
MLN01_0094_G02.b : ACGGGGGTGGAGGTGGCAGCAGCCTCGGCCTTCTCTGTGGCCCGCAGTTTGCTGGTCTTT
KDN01_0056_H12.b : ACGGGGGTGGAGGTGGCAGCAGCCTCGGCCTTCTCTGTGGCCCGCAGTTTGCTGGTCTTT
KDN01_0091_D07.b : ACGGGGGTGGAGGTGGCAGCAGCCTCGGCCTTCTCTGTGGCCCGCAGTTTGCTGGTCTTT
20110601C-007024 : GAAGTGCAGCAGCCCTTCCTTTTCGTGCTCTGGGACCAGCATCACAAGTTCCCTGTCTTC
---------+---------+---------+---------+---------+---------+ 1092
LVRM1_0181_E02.b :
LVRM1_0160_H09.b : GAAGTGCAGCAGCCCTTCCTTTTCGTGCTCTGGGACCAGCATCACAAGTTCCCTGTCTTC
MLN01_0094_G02.b : GAAGTGCAGCAGCCCTTCCTTTTCGTGCTCTGGGACCAGCATCACAAGTTCCCTGTCTTC
KDN01_0056_H12.b : GAAGTGCAGCAGCCCTTCCTTTTCGTGCTCTGGGACCAGCATCACAAGTTCCCTGTCTTC
KDN01_0091_D07.b : GAAGTGCAGCAGCCCTTCCTTTTCGTGCTCTGGGACCAGCATCACAAGTTCCCTGTCTTC
20110601C-007024 : ATGGGGCGGGTGTATGACCCCAGGTCCTGAGACCTGCGGGGGGCCAACTAGGGCAAGTCC
---------+---------+---------+---------+---------+---------+ 1152
LVRM1_0181_E02.b :
LVRM1_0160_H09.b : ATGGGGCGGGTGTATGACCCCAGGTCCTGAGACCTGCGGGGGGCCGACTAGGGCAAGTCC
MLN01_0094_G02.b : ATGGGGCGGGTGTATGACCCCAGGTCCTGAGACCTGCGGGGGGCCAACTAGGGCAAGTCC
KDN01_0056_H12.b : ATGGGGCGGGTGTATGACCCCAGGTCCTGAGACCTGCGGGGGGCCAACTAGGGCAAGTCC
KDN01_0091_D07.b : ATGGGGCGGGTGTATGACCCCAGGTCCTGAGACCTGCGGGGGGCCAACTAGGGCAAGTCC
20110601C-007024 : TTCCCCTCTGGCTTCAGCTCTCTTGGTTGCAGCTCTGGACTTGCCCCCAGCCACCTCCCG
---------+---------+---------+---------+---------+---------+ 1212
LVRM1_0181_E02.b :
LVRM1_0160_H09.b : TTCCCCTCTGGCTTCAGCTCTCTTGGTTGCAGCTCTGGACTTGCCCCCAGCCACtn
MLN01_0094_G02.b : TTCCCCTCTGGCTTCAGCTCTCTTGATTGCAGCTCTGGACTTGCCCCCAGCCACCTCCCG
KDN01_0056_H12.b : TTCCCCTCTGGCTTCAGCTCTCTTGGTTGCAGCTCTGGACTTGCCCCCAGCCACCTCCCG
KDN01_0091_D07.b : TTCCCCTCTGGCTTCAGCTCTCTTGGTTGCAGCTCTGGACTTGCCCCCAGCCACCTCCCG
20110601C-007024 : CCTCAGGTCTGCCCTCCACCTGAAAGGCTCCCCGGGGGTCTGGTGAGGGGACCTGCTTCT
---------+---------+---------+---------+---------+---------+ 1272
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : CCTCAGGTCTGCCCTCCACCTGAAAGGCTCCCCGGGGGTCTGGTGAGGGGACCTGCTTCT
KDN01_0056_H12.b : CCTCAGGTCTGCCCTCCACCTGAAAGGCTCCCCGGGGGTCTGGTGAGGGGACCTGCTTCT
KDN01_0091_D07.b : CCTCAGGTCTGCCCTCCACCTGAAAGGCTCCCCGGGGGTCTGGTGAGGGGACCTGCTTCT
20110601C-007024 : ACCATCCCTTCCCTGTGACTCTCTAAAGCACTTTTTGCAGCTTCCTCTGGTACAAATACA
---------+---------+---------+---------+---------+---------+ 1332
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : ACCATCCCTTCCCTGTGACTCTCTAAAGCACTTTTTGCAGCTTCCTCTGGTACAAATACA
KDN01_0056_H12.b : ACCATCCCTTCCCTGTGACTCTCTAAAGCACTTTTTGCAGCTTCCTCTGGTACAAATACA
KDN01_0091_D07.b : ACCATCCCTTCCCTGTGACTCTCTAAAGCACTTTTTGCAGCTTCCTCTGGTACAAATACA
20110601C-007024 : GCAGACTCTACAANTAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.............
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : GCAGACTCTACaaataaaacctggcagtcctttgannnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0056_H12.b : GCAGACTCTACAANTNanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagxxxxxxxxxxx
KDN01_0091_D07.b : GCAGACTCTACNNNTaananaaaaaaaaaaaaaaaaaaaaaaaaaaaaaxxxxxxxxxxx
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0056_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0091_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0056_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0091_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0056_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0091_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0056_H12.b : xxxxnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0091_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0056_H12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0091_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0056_H12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0091_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0056_H12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0091_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaccaaggccaagaacgttaaagggcgcc
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0091_D07.b : gtgcgtgggttttcaaaggctcgccccttgaaaagaatccaaattcagcttcagtcgaaa
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
KDN01_0091_D07.b : gggggaacccgaagaaataaaaaatcagggtttcccctggaactccctcgggccttcggt
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b : nnnnnnnnnnnnnnnnnnn
KDN01_0091_D07.b : tcacacggcctttcagaaacagtcccctttttcttcgagaagggggcttctcaaacccgc
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b : aggaattcattcgggaggcttcccacaggggtggcacaacctgtttccaaccgtctttga
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b : gatatttgttccgggaaacattcctgcgacccgagaataaagaagggggccatttgggac
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b : acccaaaaaantnnnnnnnnncctaaaatccacaccacggnnnnnnggagaactgtgtcc
20110601C-007024 : ............................................................
---------+---------+---------+---------+---------+---------+ 1379
LVRM1_0181_E02.b :
LVRM1_0160_H09.b :
MLN01_0094_G02.b :
KDN01_0056_H12.b :
KDN01_0091_D07.b : ngggtctatatattcatcatcccttgannnnnnnnnnnc