Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-007200

Sequence: [FASTA format sequence] TACTGCAGTG AAAGCCGAGG CAGCGGGCAG GCGAGCAGGG GGCGGGCGGA CATCTTGGGA TCCGGAGAGT GGCCGGCCCG GCAGAGCAGG CGGCCTCGGA CACCAGGTCT GTTCTCAGAG CGATGGGCTG CCAGGACTGA GCTGCCGCCA TGATTGGAGG CTTATTCATC TATAATCACA AGGGGGAGGT GCTCATCTCC CGGGTCTACC GAGATGACAT CGGGAGGAAC GCAGTGGACG CCTTTCGGGT CAATGTTATC CACGCCCGGC AGCAGGTGCG CAGCCCCGTC ACCAACATCG CTCGCACCAG TTTCTTCCAT GTTAAGCGGT CCAACATCTG GCTGGCAGCT GTCACCAAGC AGAATGTCAA TGCTGCCATG GTCTTCGAAT TCCTCTATAA GATGTGTGAC GTAATGGCTG CCTACTTTGG GAAGATCAGC GAAGAGAACA TCAAGAACAA TTTTGTGCTC ATATATGAGT TGCTTGATGA GATCCTGGAC TTTGGCTACC CGCAGAACTC AGAGACGGGC GCGCTAAAAA CCTTCATCAC CCAGCAGGGC ATCAAAAGCC AGCATCACGA AAGAAGAGCA GTCCCAAATC ACCAGCCAGG TGACAGGGCA GATTGGCTGG CGGCGGGAAG GCATCAAGTA TCGCCGAAAC GAGCTCTTCC TGGATGTGCT GGAGAGTGTG AACCTCCTCA TGTCCCCACA GGGGCAGGTG CTGAGCGCCC ATGTGTCCGG CCGAGTGGTG ATGAAGAGCT ACCTGAGTGG CATGCCCTGA ATGCAGTTTG GGATGAATGA CAAGATTGTC ATTGAGAAGC AGGGGCAAGG CACAGCCGAT TGAAACAGCA AGAGCGGGGA AGCATCAATT GCCATTGATG ACTGCACCTT CCACCAGTGT GTTCGACTCA ACAAGTTTGA CTCTGAACGC AGCATCAGCT TCATCCCACC AGATGGANAA TTTGAGCTCA TGAGGTATCG CACCAACCAG GACATCATCC TTCCCCTCCN AGTGATCCCG CTAGTTCGGG AAGTGGGCGC ACCAAGCTGG AGGTCA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
AP2M1 AP-2 complex subunit mu isoform a [Homo sapiens]. 286 e-154 O

AP2M1 AP-2 complex subunit mu isoform b [Homo sapiens]. 286 2e-77 O

AP1M1 AP-1 complex subunit mu-1 isoform 2 [Homo sapiens]. 142 8e-62 O

AP1M2 AP-1 complex subunit mu-2 [Homo sapiens]. 139 3e-62 O

AP1M1 AP-1 complex subunit mu-1 isoform 1 [Homo sapiens]. 133 3e-59 O

AP3M1 AP-3 complex subunit mu-1 [Homo sapiens]. 84.3 1e-32 O

AP3M1 AP-3 complex subunit mu-1 [Homo sapiens]. 84.3 1e-32 O

AP3M2 AP-3 complex subunit mu-2 [Homo sapiens]. 83.2 4e-16 O

AP4M1 AP-4 complex subunit mu-1 [Homo sapiens]. 83.2 1e-31 O

AP3M2 AP-3 complex subunit mu-2 [Homo sapiens]. 83.2 4e-16 O

Locus	Definition	Score	E value	FL
AP2M1	AP-2 complex subunit mu isoform a [Homo sapiens].	286	e-154	O
AP2M1	AP-2 complex subunit mu isoform b [Homo sapiens].	286	2e-77	O
AP1M1	AP-1 complex subunit mu-1 isoform 2 [Homo sapiens].	142	8e-62	O
AP1M2	AP-1 complex subunit mu-2 [Homo sapiens].	139	3e-62	O
AP1M1	AP-1 complex subunit mu-1 isoform 1 [Homo sapiens].	133	3e-59	O
AP3M1	AP-3 complex subunit mu-1 [Homo sapiens].	84.3	1e-32	O
AP3M1	AP-3 complex subunit mu-1 [Homo sapiens].	84.3	1e-32	O
AP3M2	AP-3 complex subunit mu-2 [Homo sapiens].	83.2	4e-16	O
AP4M1	AP-4 complex subunit mu-1 [Homo sapiens].	83.2	1e-31	O
AP3M2	AP-3 complex subunit mu-2 [Homo sapiens].	83.2	4e-16	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Ap2m1 AP-2 complex subunit mu [Mus musculus]. 286 e-154 O

Ap1m1 AP-1 complex subunit mu-1 [Mus musculus]. 140 1e-61 O

Ap1m2 AP-1 complex subunit mu-2 isoform 2 [Mus musculus]. 139 2e-63 O

Ap1m2 AP-1 complex subunit mu-2 isoform 1 [Mus musculus]. 139 2e-63 O

Ap4m1 AP-4 complex subunit mu-1 [Mus musculus]. 84.7 3e-31 O

Ap3m1 AP-3 complex subunit mu-1 [Mus musculus]. 84.3 1e-32 O

Ap3m2 AP-3 complex subunit mu-2 [Mus musculus]. 82.4 5e-16 O

Ap3m2 AP-3 complex subunit mu-2 [Mus musculus]. 82.4 5e-16 O

Ston2 stonin-2 [Mus musculus]. 59.3 5e-09

Ston1 stonin-1 [Mus musculus]. 56.6 3e-08

Locus	Definition	Score	E value	FL
Ap2m1	AP-2 complex subunit mu [Mus musculus].	286	e-154	O
Ap1m1	AP-1 complex subunit mu-1 [Mus musculus].	140	1e-61	O
Ap1m2	AP-1 complex subunit mu-2 isoform 2 [Mus musculus].	139	2e-63	O
Ap1m2	AP-1 complex subunit mu-2 isoform 1 [Mus musculus].	139	2e-63	O
Ap4m1	AP-4 complex subunit mu-1 [Mus musculus].	84.7	3e-31	O
Ap3m1	AP-3 complex subunit mu-1 [Mus musculus].	84.3	1e-32	O
Ap3m2	AP-3 complex subunit mu-2 [Mus musculus].	82.4	5e-16	O
Ap3m2	AP-3 complex subunit mu-2 [Mus musculus].	82.4	5e-16	O
Ston2	stonin-2 [Mus musculus].	59.3	5e-09
Ston1	stonin-1 [Mus musculus].	56.6	3e-08

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 24 [Canis familiaris]. 286 e-147 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 19 [Canis familiaris]. 286 e-154 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 25 [Canis familiaris]. 286 e-148 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 1 [Canis familiaris]. 286 e-154 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 4 [Canis familiaris]. 285 e-149 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 14 [Canis familiaris]. 282 e-150 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform b isoform 12 [Canis familiaris]. 282 e-145 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform b isoform 20 [Canis familiaris]. 282 e-152 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform b isoform 18 [Canis familiaris]. 282 e-150 O

LOC607139 PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 16 [Canis familiaris]. 281 e-152 O

Locus	Definition	Score	E value	FL
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 24 [Canis familiaris].	286	e-147	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 19 [Canis familiaris].	286	e-154	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 25 [Canis familiaris].	286	e-148	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 1 [Canis familiaris].	286	e-154	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 4 [Canis familiaris].	285	e-149	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 14 [Canis familiaris].	282	e-150	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform b isoform 12 [Canis familiaris].	282	e-145	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform b isoform 20 [Canis familiaris].	282	e-152	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform b isoform 18 [Canis familiaris].	282	e-150	O
LOC607139	PREDICTED: similar to adaptor-related protein complex 2, mu 1 subunit isoform 16 [Canis familiaris].	281	e-152	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
AP2M1 AP-2 complex subunit mu [Bos taurus]. 286 e-154 O

AP1M1 AP-1 complex subunit mu-1 [Bos taurus]. 142 7e-62 O

AP1M2 AP-1 complex subunit mu-2 [Bos taurus]. 139 2e-63 O

AP4M1 AP-4 complex subunit mu-1 [Bos taurus]. 85.1 6e-32 O

AP3M1 AP-3 complex subunit mu-1 [Bos taurus]. 84.3 1e-32 O

AP3M2 PREDICTED: adaptor-related protein complex 3, mu 2 subunit [Bos taurus]. 83.2 4e-16 O

AP3M2 AP-3 complex subunit mu-2 [Bos taurus]. 83.2 4e-16 O

STON2 stonin-2 [Bos taurus]. 57.8 2e-08

STON2 PREDICTED: stonin 2 [Bos taurus]. 57.8 2e-08

Locus	Definition	Score	E value	FL
AP2M1	AP-2 complex subunit mu [Bos taurus].	286	e-154	O
AP1M1	AP-1 complex subunit mu-1 [Bos taurus].	142	7e-62	O
AP1M2	AP-1 complex subunit mu-2 [Bos taurus].	139	2e-63	O
AP4M1	AP-4 complex subunit mu-1 [Bos taurus].	85.1	6e-32	O
AP3M1	AP-3 complex subunit mu-1 [Bos taurus].	84.3	1e-32	O
AP3M2	PREDICTED: adaptor-related protein complex 3, mu 2 subunit [Bos taurus].	83.2	4e-16	O
AP3M2	AP-3 complex subunit mu-2 [Bos taurus].	83.2	4e-16	O
STON2	stonin-2 [Bos taurus].	57.8	2e-08
STON2	PREDICTED: stonin 2 [Bos taurus].	57.8	2e-08

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
AP2M1 adaptor-related protein complex 2, mu 1 subunit [Sus scrofa]. 284 e-153 O

AP1M1 adaptor-related protein complex 1, mu 1 subunit [Sus scrofa]. 142 5e-62 O

LOC100154867 PREDICTED: AP-3 complex subunit mu-1-like [Sus scrofa]. 84.3 7e-33 O

AP3M1 adaptor-related protein complex 3, mu 1 subunit [Sus scrofa]. 84.3 7e-33 O

AP3M2 PREDICTED: AP-3 complex subunit mu-2 [Sus scrofa]. 79 4e-15 O

LOC100157426 PREDICTED: LOW QUALITY PROTEIN: stonin-2-like [Sus scrofa]. 59.3 3e-09

Locus	Definition	Score	E value	FL
AP2M1	adaptor-related protein complex 2, mu 1 subunit [Sus scrofa].	284	e-153	O
AP1M1	adaptor-related protein complex 1, mu 1 subunit [Sus scrofa].	142	5e-62	O
LOC100154867	PREDICTED: AP-3 complex subunit mu-1-like [Sus scrofa].	84.3	7e-33	O
AP3M1	adaptor-related protein complex 3, mu 1 subunit [Sus scrofa].	84.3	7e-33	O
AP3M2	PREDICTED: AP-3 complex subunit mu-2 [Sus scrofa].	79	4e-15	O
LOC100157426	PREDICTED: LOW QUALITY PROTEIN: stonin-2-like [Sus scrofa].	59.3	3e-09

Assembly Members: 7 TOP

Library Plate Loc. Read Name Accession Full Seq.

HTMT1 0077 D12 HTMT1_0077_D12.b FS669686
LNG01 0067 D03 LNG01_0067_D03.b BP436152
LVRM1 0081 A08 LVRM1_0081_A08.b CJ002422
LVRM1 0198 H06 LVRM1_0198_H06.b CJ006895 AK398964
OVRT1 0019 G10 OVRT1_0019_G10.b FS687986
SMG01 0094 C02 SMG01_0094_C02.b FS721365
THY01 0007 A06 THY01_0007_A06.b BP159876 AK398326

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
410 C 5 0 0.714 B S GAC/D
T 0 2 0.286 GAT/D

Alignment: TOP

20110601C-007200 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
LVRM1_0198_H06.b :                          xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0019_G10.b : nnttttccgtttgcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0067_D03.b :         tttggggctggacttgacagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0007_A06.b :                                    acxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0081_A08.b :                                            agttgtcxxxxxxxxxx
HTMT1_0077_D12.b :                                                    tttttggca
SMG01_0094_C02.b :                                                            n


20110601C-007200 : ..............TACTGCAGTGAAAGCCGAGGCAGCGGGCAGGCGAGCAGGGGGCGGG
                   ---------+---------+---------+---------+---------+---------+ 46
LVRM1_0198_H06.b : xxxxxxxxxxxxxxTACTGCAGTGAAAGCCGAGGCAGCGGGCAGGCGAGCAGGGGGCGGG
OVRT1_0019_G10.b : xxxxxxxxxxxxxxTACTGCAGTGAAAGCCGAGGCAGCGGGCAGGCGAGCAGGGGGCGGG
LNG01_0067_D03.b : xxxxxxxxxxxxxxxxxxxxxxxGAAAGCCGAGGCAGCGGGCAGGCGAGCAGGGGGCGGG
THY01_0007_A06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxGCCGAGGCAGCGGGCAGGCGAGCAGGGGGCGGG
LVRM1_0081_A08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGCGAGCAGGGGGCGGG
HTMT1_0077_D12.b : ggtagaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGGGGGCGGG
SMG01_0094_C02.b : ncccttatnnnnnggataaagcagcggtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-007200 : CGGACATCTTGGGATCCGGAGAGTGGCCGGCCCGGCAGAGCAGGCGGCCTCGGACACCAG
                   ---------+---------+---------+---------+---------+---------+ 106
LVRM1_0198_H06.b : CGGACATCTTGGGATCCGGAGAGTGGCCGGCCCGGCAGAGCAGGCGGCCTCGGACACCAG
OVRT1_0019_G10.b : CGGACATCTTGGGATCCGGAGAGTGGCCGGCCCGGCAGAGCAGGCGGCCTCGGACACCAG
LNG01_0067_D03.b : CGGACATCTTGGGATCCGGAGAGTGGCCGGCCCGGCAGAGCAGGCGGCCTCGGACACCAG
THY01_0007_A06.b : CGGACATCTTGGGATCCGGAGAGTGGCCGGCCCGGCAGAGCAGGCGGCCTCGGACACCAG
LVRM1_0081_A08.b : CGGACATCTTGGGATCCGGAGAGTGGCCGGCCCGGCAGAGCAGGCGGCCTCGGACACCAG
HTMT1_0077_D12.b : CGGACATCTTGGGATCCGGAGAGTGGCCGGCCCGGCAGAGCAGGCGGCCTCGGACACCAG
SMG01_0094_C02.b : xxxxxxTCTTGGGATCCGGAGAGTGGCCGGCCCGGCAGAGCAGGCGGCCTCGGACACCAG


20110601C-007200 : GTCTGTTCTCAGAGCGATGGGCTGCCAGGACTGAGCTGCCGCCATGATTGGAGGCTTATT
                   ---------+---------+---------+---------+---------+---------+ 166
LVRM1_0198_H06.b : GTCTGTTCTCAGAGCGATGGGCTGCCAGGACTGAGCTGCCGCCATGATTGGAGGCTTATT
OVRT1_0019_G10.b : GTCTGTTCTCAGAGCGATGGGCTGCCAGGACTGAGCTGCCGCCATGATTGGAGGCTTATT
LNG01_0067_D03.b : GTCTGTTCTCAGAGCGATGGGCTGCCAGGACTGAGCTGCCGCCATGATTGGAGGCTTATT
THY01_0007_A06.b : GTCTGTTCTCAGAGCGATGGGCTGCCAGGACTGAGCTGCCGCCATGATTGGAGGCTTATT
LVRM1_0081_A08.b : GTCTGTTCTCAGAGCGATGGGCTGCCAGGACTGAGCTGCCGCCATGATTGGAGGCTTATT
HTMT1_0077_D12.b : GTCTGTTCTCAGAGCGATGGGCTGCCAGGACTGAGCTGCCGCCATGATTGGAGGCTTATT
SMG01_0094_C02.b : GTCTGTTCTCAGAGCGATGGGCTGCCAGGACTGAGCTGCCGCCATGATTGGAGGCTTATT


20110601C-007200 : CATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAG
                   ---------+---------+---------+---------+---------+---------+ 226
LVRM1_0198_H06.b : CATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAG
OVRT1_0019_G10.b : CATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAG
LNG01_0067_D03.b : CATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAG
THY01_0007_A06.b : CATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAG
LVRM1_0081_A08.b : CATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAG
HTMT1_0077_D12.b : CATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAG
SMG01_0094_C02.b : CATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAG


20110601C-007200 : GAACGCAGTGGACGCCTTTCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCC
                   ---------+---------+---------+---------+---------+---------+ 286
LVRM1_0198_H06.b : GAACGCAGTGGACGCCTTTCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCC
OVRT1_0019_G10.b : GAACGCAGTGGACGCCTTTCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCC
LNG01_0067_D03.b : GAACGCAGTGGACGCCTTTCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCC
THY01_0007_A06.b : GAACGCAGTGGACGCCTTTCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCC
LVRM1_0081_A08.b : GAACGCAGTGGACGCCTTTCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCC
HTMT1_0077_D12.b : GAACGCAGTGGACGCCTTTCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCC
SMG01_0094_C02.b : GAACGCAGTGGACGCCTTTCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCC


20110601C-007200 : CGTCACCAACATCGCTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGC
                   ---------+---------+---------+---------+---------+---------+ 346
LVRM1_0198_H06.b : CGTCACCAACATCGCTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGC
OVRT1_0019_G10.b : CGTCACCAACATCGCTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGC
LNG01_0067_D03.b : CGTCACCAACATCGCTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGC
THY01_0007_A06.b : CGTCACCAACATCGCTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGC
LVRM1_0081_A08.b : CGTCACCAACATCGCTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGC
HTMT1_0077_D12.b : CGTCACCAACATCGCTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGC
SMG01_0094_C02.b : CGTCACCAACATCGCTCGCACCAGTTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGC


20110601C-007200 : AGCTGTCACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTATAAGATGTG
                   ---------+---------+---------+---------+---------+---------+ 406
LVRM1_0198_H06.b : AGCTGTCACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTATAAGATGTG
OVRT1_0019_G10.b : AGCTGTCACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTATAAGATGTG
LNG01_0067_D03.b : AGCTGTCACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTATAAGATGTG
THY01_0007_A06.b : AGCTGTCACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTATAAGATGTG
LVRM1_0081_A08.b : AGCTGTCACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTATAAGATGTG
HTMT1_0077_D12.b : AGCTGTCACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTATAAGATGTG
SMG01_0094_C02.b : AGCTGTCACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTATAAGATGTG


20110601C-007200 : TGACGTAATGGCTGCCTACTTTGGGAAGATCAGCGAAGAGAACATCAAGAACAATTTTGT
                   ---------+---------+---------+---------+---------+---------+ 466
LVRM1_0198_H06.b : TGATGTAATGGCTGCCTACTTTGGGAAGATCAGCGAAGAGAACATCAAGAACAATTTTGT
OVRT1_0019_G10.b : TGACGTAATGGCTGCCTACTTTGGGAAGATCAGCGAAGAGAACATCAAGAACAATTTTGT
LNG01_0067_D03.b : TGACGTAATGGCTGCCTACTTTGGGAAGATCAGCGAAGAGAACATCAAGAACAATTTTGT
THY01_0007_A06.b : TGACGTAATGGCTGCCTACTTTGGGAAGATCAGCGAAGAGAACATCAAGAACAATTTTGT
LVRM1_0081_A08.b : TGATGTAATGGCTGCCTACTTTGGGAAGATCAGCGAAGAGAACATCAAGAACAATTTTGT
HTMT1_0077_D12.b : TGACGTAATGGCTGCCTACTTTGGGAAGATCAGCGAAGAGAACATCAAGAACAATTTTGT
SMG01_0094_C02.b : TGACGTAATGGCTGCCTACTTTGGGAAGATCAGCGAAGAGAACATCAAGAACAATCTTGT


20110601C-007200 : GCTCATATATGAGTTGCTTGATGAGATCCTGGACTTTGGCTACCCGCAGAACTCAGAGAC
                   ---------+---------+---------+---------+---------+---------+ 526
LVRM1_0198_H06.b : GCTCATATATGAGTTGCTTGATGAGATCCTGGACTTTGGCTACCCGCAGAACTCAGAGAC
OVRT1_0019_G10.b : GCTCATATATGAGTTGCTTGATGAGATCCTGGACTTTGGCTACCCGCAGAACTCAGAGAC
LNG01_0067_D03.b : GCTCATATATGAGTTGCTTGATGAGATCCTGGACTTTGGCTACCCGCAGAACTCAGAGAC
THY01_0007_A06.b : GCTCATATATGAGTTGCTTGATGAGATCCTGGACTTTGGCTACCCGCAGAACTCAGAGAC
LVRM1_0081_A08.b : GCTCATATATGAGTTGCTTGATGAGATCCTGGACTTTGGCTACCCGCAGAACTCAGAGAC
HTMT1_0077_D12.b : GCTCATATATGAGTTGCTTGATGAGATCCTGGACTTTGGCTACCCGCAGAACTCAGAGAC
SMG01_0094_C02.b : GCTCATATATGAGTTGCTTGATGAGATCCTGGACTTTGGCTACCCGCAGAACTCAGAGAC


20110601C-007200 : GGGCGCGCTAAAAACCTTCATCACCCAGCAGGGCATCAAAAGCCAGCATC**ACGAAAGA
                   ---------+---------+---------+---------+---------+---------+ 584
LVRM1_0198_H06.b : AGGCGCGCTAAAAACCTTCATCACCCAGCAGGGCATCAAAAGCCAGCATCAGACGAAAGA
OVRT1_0019_G10.b : GGGCGCGCTAAAAACCTTCATCACCCAGCAGGGCATCAAAAGCCAGCATCAGACGAAAGA
LNG01_0067_D03.b : GGGCGCGCTAAAAACCTTCATCACCCAGCAGGGCATCAAAAGCCAG******ACGAAAGA
THY01_0007_A06.b : GGGCGCGCTATAAACCTTCATCACCCAGCAGGGCATCAAAAGCCAG******ACGAAAGA
LVRM1_0081_A08.b : AGGCGCGCTAAAAACCTTCATCACCCAGCAGGGCATCAAAAGCCAG******ACGAAAGA
HTMT1_0077_D12.b : GGGCGCGCTAAAAACCTTCATCACCCAGCAGGGCATCAAAAGCCAGCATCAGACGAAAGA
SMG01_0094_C02.b : GGGCGCGCTAAAAACCTTCATCACCCAGCAGGGCATCAAAAGCCAGAC******GAAAGA


20110601C-007200 : AGAG*CAGTCCCAAATCACCAGCCAGGTGACAGGGCAGATTGGCTGGCGGCGGGAAGGCA
                   ---------+---------+---------+---------+---------+---------+ 643
LVRM1_0198_H06.b : AGAG*CAGTCCCAAATCACCAGCCAGGTGACAGGGCAGATTGGCTGGCGGCGGGAAGGCA
OVRT1_0019_G10.b : AGAG*CAGTCCCAAATCACCAGCCAGGTGACAGGGCAGATTGGCTGGCGGCGGGAAGGCA
LNG01_0067_D03.b : AGAG*CAGTCCCAAATCACCAGCCAGGTGACAGGGCAGATTGGCTGGCGGCGGGAAGGCA
THY01_0007_A06.b : AGAGCCAGTCCCCAATCACCAGCCAGGTGACAGGGCAGATTGGCTGGCGGCGGGAAGGCA
LVRM1_0081_A08.b : AGAG*CAGTCCCAAATCACCAGCCAGGTGACACGGCAGATTGGCTGGCGGCGGGAAAGCA
HTMT1_0077_D12.b : AGAG*CAGTCCCAANTCACCAGCCAGGTGACAGGGCAGATTGGCTGGGCGCGGGAAGGCA
SMG01_0094_C02.b : AGAG*CAGTCCCAAATCACCAGCCAGGTGACAGGGCAAATTGGCTGGCGGCGGGAAAGCA


20110601C-007200 : TCAAGTATCGCCGAAACGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTCCTCATGT
                   ---------+---------+---------+---------+---------+---------+ 703
LVRM1_0198_H06.b : TCAAGTATCGCCGAAACGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTCCTCATGT
OVRT1_0019_G10.b : TCAAGTATCGCCGAAACGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTCCTCATGT
LNG01_0067_D03.b : TCAAGTATCGCCGAAACGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTCCTCATGT
THY01_0007_A06.b : TCACGCATCGCCGACACGAGCTCTTCCTGCATGCGCTGGAGAGTGTGAACCTCCTCATGT
LVRM1_0081_A08.b : TCAAGTATCGCCGAAACGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTCCTCATGT
HTMT1_0077_D12.b : TCAAGTATCGCCGAAACGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTCCTCATGT
SMG01_0094_C02.b : TCAAGTATCGCCGAAACGAGCTCTTCCTGGATGTGCTGGAAAGTGTGAACCTCTTCATGT


20110601C-007200 : CCCCACAGGGGCAGGTGCTGAGCGCCCATGTGTCCGGCC*GAGTGGTGATGAAGAGCTAC
                   ---------+---------+---------+---------+---------+---------+ 762
LVRM1_0198_H06.b : CCCCACAGGGGCAGGTGCTGAGCGCCCATGTGTCCng                      
OVRT1_0019_G10.b : CCCCACAGGGGCAGGTGCTGAGCGCCCATGTGTCCGGCC*GAGTGGTGATGAAGAGCTAC
LNG01_0067_D03.b : CCCCACAGGGGCAGGTGCTGAGCGCCCATGTGTCCGGCC*GAGTGGTGATGAAGAGCTAC
THY01_0007_A06.b : CCC*ACAGGGGCAAGTGCTGAGCGCCatgcgtccggccgatgctgatgagagctacctga
LVRM1_0081_A08.b : CCCCACAGGGGCAAGTGCCTGACGCCCATGTGTCCGGCC*AAGTGGTGATGAAcaactcc
HTMT1_0077_D12.b : CCC*ACAGGGGCAGGTGCTGAGCGCCCATGTGTCCNGNC*GAGTGGTGATGAAAAGCTAC
SMG01_0094_C02.b : CCCCACAGGGGCAGGTGCTGAACGCCCATGTGTCCGGCCNGAGTGGTGAAAAAAAGCTAC


20110601C-007200 : CTGAGTGGCATGCCCTGAATGCAGTTTGGGATGAATGACAAGATTGTCATTGAGAAGCAG
                   ---------+---------+---------+---------+---------+---------+ 822
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : CTGAGTGGCATGCCTNGAGTGCAGTTTGGGATGAATGACAAGATTGTCATTGAGAAGCAN
LNG01_0067_D03.b : CTGAGTGGCATGCCTNGAGTGCAGTTTGGGATGAATGACAAGATTGTCATTGAGAAGCAG
THY01_0007_A06.b : gcgcctgcctgactgcaagttgggatgcatgacagaatcgccttgacaccagggcaagcc
LVRM1_0081_A08.b :                                                            
HTMT1_0077_D12.b : CTGAGTGGCATGCCCTGAATGCAGTTGGGGATGAtgacagattgtcattgaaaaacaggg
SMG01_0094_C02.b : CTGAATGGCATGGCCGAATGGCAATTTGGGATGAATGACAAaatttgcattggaaaacca


20110601C-007200 : GGGCAAGGCACAGCCGATTGAAACAGCAAGAGCGGGGAAGCATCAATTGCCATTGATGAC
                   ---------+---------+---------+---------+---------+---------+ 882
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : GGGCAAGGCACAGCCGATGAAAACAGCAAGAGCGGGGAAGCATCAATTGCCATTGATGAC
LNG01_0067_D03.b : GGCAAAGGCACAGCCGAATGAAACAGCAAGAGCGGGGAAGCATCAATTGCCATTGATGAC
THY01_0007_A06.b : cacccacgaacaagcagagcgggaagtatcattgg                        
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b : caaagcacagcgatgaaaacagcagagcgggaaagcatcattgcattgatgactgcactt
SMG01_0094_C02.b : ggccaaaggcccaccccatgaaacaacgcaaaaccgggaaacaatccattgcccttgtgg


20110601C-007200 : TGCACCTTCCACCAGTGTGTTCGACTCAACAAGTTTGACTCTGAACGCAGCATCAGCTTC
                   ---------+---------+---------+---------+---------+---------+ 942
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : TGCACCTTCCCACAGTGTGTTCGAACTCAGCAGTTTGACTCTGAACGCAGCATCAGCTTC
LNG01_0067_D03.b : TGCACCTTCCACCAGTGTGTTCGACTCAGCAAGTTTGACTCTNGACGCAGCATCAGCTTC
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b : ccaacagtgtgtcgactcagcagtttgactctgacgcaacatcagcttctcccaaccaat
SMG01_0094_C02.b : aggggccctttccccattggttccaacccaccagtttaaactctaaagacaaaataattt


20110601C-007200 : ATCCCACCAGATGGANAATTTGAGCTCATGAGGTATCGCACCAACCAGGACATCATCCTT
                   ---------+---------+---------+---------+---------+---------+ 1002
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : ATCCCACagaatgaagatttgagctcatgaggtatcgcaccacaagggaatcattctttc
LNG01_0067_D03.b : ATCCCACCAGATGGANAATTTGAGCTCATGAGGTATCGCACCAACCAGGACATCATCCTT
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b : ggaaattggactcttgaggtatcgaccaccaggaaatcatcctcccttccaaggatcccc
SMG01_0094_C02.b : tttcccccccaaagggaaaatttgccctttgggggttccccccccccagggatttctcct


20110601C-007200 : CCCCTCCNAGTGATCCCGCTAGTTCGGGAAGTGGGCGCACCAAGCTGGAGGTCA......
                   ---------+---------+---------+---------+---------+---------+ 1056
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : ccttccagtgatcccgctagttcggaaattggggccaccaagctggaggtcaaggtgtgc
LNG01_0067_D03.b : CCCCTCCNAGTGATCCCGCTAGTTCGGGAAGTGGGCGCACCAAGCTGGAGGTCAggtggt
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b : ctatttggggaggggggggcccaccggggggcaggggggcttaatccaattttacccctc
SMG01_0094_C02.b : tcccctctcaaggtttccccctttttggggaaggggggccccccccgcgggggggcaggg


20110601C-007200 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1056
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : ttaagtcaaccttcagcccctcctactggcctaaaaaattgagtgaggatccaacccctt
LNG01_0067_D03.b : cattaagtcaacttcagcccctcctactnctcaaaagattgagtgaggatcccaccccct
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b : cttggggtcaaaaataggggggggtccaccccccaaaaccccgggggggggattctttta
SMG01_0094_C02.b : ggggtttttttccaattttaacccccttatggggtaaaaaaattgggggggagtcccccc


20110601C-007200 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1056
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : gaaaccaacgggttgccggtgttcttttgaggggagggttattaaaggccccaaaacccc
LNG01_0067_D03.b : gaccccaccgggtgcagggatcgcctgaggggaagctaatacaggccgcaaaaagcctcc
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b : ggggaggaatttaaggcccggaacccccccggggagaaaacccgcggggggaggaaacac
SMG01_0094_C02.b : cccctgaaacccacgggggtgggtgtttttttaagggggaagataaaaaaggccgcgaaa


20110601C-007200 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1056
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : ctctggggaaaacaccgccgggggcgtagagaaacccaaaccgcctaaatatatctctcc
LNG01_0067_D03.b : ttggaaataaccccggcggctgaagaacccaatcccctgaattgcttcgccccatggcaa
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b : aaaccccgatattttct                                          
SMG01_0094_C02.b : accccttgggtgaaaaaacccgggggggggggggaaaaacacaacccccataatattttc


20110601C-007200 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1056
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : cccaaaaaaaaaaaggcgccccccttttaaaaatttgggccccccccctccgccccgggc
LNG01_0067_D03.b : aaaagggcaccccttttaaaatttaggcctcgcccccgccagggcgcctaggtttaccac
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b :                                                             
SMG01_0094_C02.b : ccccccaacaaaaaaaagaggccccccccctttaaaaaattgggggcccccccccccccc


20110601C-007200 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1056
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b : cctctgggtttaacaaaaataaacccccttttt                          
LNG01_0067_D03.b : taaaccaccatttaaggggcgatggccggtttaaaccgttcggagaaagccccccctcag
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b :                                                             
SMG01_0094_C02.b : cgggggcctttagttgttttccaacaaaaaccccccccctcttggggggccctcggcggg


20110601C-007200 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1056
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b :                                                             
LNG01_0067_D03.b : tggccccattccctttcttcccttgtcacgaaagaagaccgggggggtttccctcctcga
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b :                                                             
SMG01_0094_C02.b : ggttttataaaaaagccgtgagaagaaacccccccccccccctttttgggggggccgaaa


20110601C-007200 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1056
LVRM1_0198_H06.b :                                                             
OVRT1_0019_G10.b :                                                             
LNG01_0067_D03.b : ccatcatt                                                   
THY01_0007_A06.b :                                                             
LVRM1_0081_A08.b :                                                             
HTMT1_0077_D12.b :                                                             
SMG01_0094_C02.b : aaatttcttctttttttt