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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-007275

Length: 1,075

Sequence [FASTA format sequence]
CTCTTTAGGT CCGGCCCTCG GGAAAGATGG CTGCGGTACA GGCGGCTGAA GTTAAAGTGG
ACGGCGCGGA GCCGAAACTG AGCAAAAAGT GGTGGTAATC ATTAGTTCCA GGGTATTCTA
CCATGTTGAC GCAAGCTGCT GTAAGGCTGG TTAGGGGGTC CCTGCGCCAA ACCTCCTGGG
CACAGTGGGG GCAGAGGGAG CTGCGCCTGT ATCAACTTGC CCCTTTCACA ACGATTCACA
AGGACAAGCC ACTTTCTGAT AAAAGAAGTG AGCTAAAGAG ACGCCTTAAA GCTGAGAAGA
AAATAGCAGA GAAGGAGGCC AAGCAGAAGG AGCTCAGTGA AAAACAGCTA AGCCAGGCCA
CCACTGCTGC CACCAACCAC ACCACTGACA ATGGCGTTGC TGCGGAGGAG GAGAGCCTGG
ACCCAAATCA ATACTTCAAA ATCCGCAGCC AGGCAGTGCA CCAACTGAAG GTCAGTGGGG
AAGACCCATA CCCACACAAG TTCCACGTCG ACATCTCGCT CACTCACTTC ATCGAAGAAT
ACAGTCACCT GCAGCCTGGG GACCACCTGA CTGACATCAC CTTAAAGGTG GCAGGTAGGA
TCCATGCCAA AAGAGCTTCT GGGGGAAAGC TCATCTTCTA TGACCTTCGA GGAGAGGGGG
TCAAGTTGCA AGTCATGGCC AATTCCAGGA ATTATAAATC AGAAGAAGAA TTTGTTCGTA
TCAATAACAA ACTGCGCCGG GGCGACATAA TTGGAGTTCA GGGCAGTCCT GGGAAAACCA
AGAAGGGTGA GCTGAGCATC ATTCCCTATG AGATCACGCT GCTGTCTCCT TGCTTGCACA
TGTTACCTCA TCTTCACTTT GGCCCCCAGG ACAAGGAAAC ACGGTATCGT CAGCGATACT
TGGACTTGAT CCTGAATGAC TTCGTGAGGC AGAAATTTAT CATCCGCTCC AGATCATCAC
ATACATAAGA AGTTTCTTGG AAGCGTTGGA ATTCCTAAAA ATTGAACTCC CATGATGAAC
ATCATCCCAG GGGGAGCTGT GGCCAAGCCT TTTATCACCT ACCACACGAG CTGGA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKARSlysyl-tRNA synthetase isoform 1 [Homo sapiens]. 435e-130O
Contig/Assembly ProteinKARSlysyl-tRNA synthetase isoform 2 [Homo sapiens]. 370e-111O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKarslysyl-tRNA synthetase isoform 1 [Mus musculus]. 431e-129O
Contig/Assembly ProteinKarslysyl-tRNA synthetase isoform 2 [Mus musculus]. 362e-108O
Contig/Assembly ProteinLOC631033PREDICTED: lysyl-tRNA synthetase-like isoform 1 [Mus musculus]. 356e-107O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC479644PREDICTED: similar to lysyl-tRNA synthetase isoform 3 [Canis familiaris]. 448e-134O
Contig/Assembly ProteinLOC479644PREDICTED: similar to lysyl-tRNA synthetase isoform 8 [Canis familiaris]. 448e-134O
Contig/Assembly ProteinLOC479644PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) isoform 4 [Canis familiaris]. 375e-106O
Contig/Assembly ProteinLOC479644PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) isoform 1 [Canis familiaris]. 375e-112O
Contig/Assembly ProteinLOC479644PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) isoform 7 [Canis familiaris]. 1807e-54O
Contig/Assembly ProteinLOC479644PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) isoform 6 [Canis familiaris]. 1807e-54O
Contig/Assembly ProteinLOC479644PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) isoform 5 [Canis familiaris]. 1714e-51O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKARSlysyl-tRNA synthetase [Bos taurus]. 445e-133O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKARSPREDICTED: lysyl-tRNA synthetase isoform 2 [Sus scrofa]. 470e-141O
Contig/Assembly ProteinKARSPREDICTED: lysyl-tRNA synthetase isoform 1 [Sus scrofa]. 387e-116O


Assembly Members: 10      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010037F08ADR01_0037_F08.bDB784797 
ADR010075A01ADR01_0075_A01.bDB788117 
ADR010076E03ADR01_0076_E03.bDB788255 
ITT010044F06ITT01_0044_F06.bBW979986 
OVR010053G03OVR01_0053_G03.bBW964369 
SKNB10023A11SKNB1_0023_A11.b  
SMG010067F07SMG01_0067_F07.bFS719081 
TCH010017E04TCH01_0017_E04.bBW975705 
THY010014F03THY01_0014_F03.bBP165801 AK238649
UTR010085G01UTR01_0085_G01.bCJ037871 

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
68C200.200W-
G800.800
341A800.800WSGAA/E
G200.200GAG/E
626A800.800WSGGA/G
T200.200GGT/G


Alignment:      TOP

20110601C-007275 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SMG01_0067_F07.b : naagcaaaannnnnggagtaagcagcggtaxxxxxxxxxxxxxx
TCH01_0017_E04.b : nnnnnggctgtactatgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0037_F08.b : nnnnggtgaagcxxxxxxxxxxxxxxxxxxxxx
ADR01_0075_A01.b : tttaaaantgagtaacaxxxxxxxxxxxxxxxxxxxxx
ADR01_0076_E03.b : aaaaaagggactaacaxxxxxxxxxxxxxxxxxxxx
ITT01_0044_F06.b : nnnggatgaacxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0085_G01.b : nnnttggctagtactatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0053_G03.b : nnnttcgctaggactatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0014_F03.b : ttagcaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SKNB1_0023_A11.b : nncgc
20110601C-007275 : ......................CTCTTTAGGTCCGGCCCTCGGGAAAGATGGCTGCGGTA
---------+---------+---------+---------+---------+---------+ 38
SMG01_0067_F07.b : xxxxxxxxxxxxxxxxxxxxxxCTCTTTAGGTCCGGCCCTCGGGAAAGATGGCTGCGGTA
TCH01_0017_E04.b : xxxxxxxxxxxxxxxxxxxxxxCTCTTTAGGTCCGGCCCTCGGGAAAGATGGCTGCGGTA
ADR01_0037_F08.b : xxxxxxxxxxxxxxxxxxxxxxCTCTTTAGGTCCGGCCCTCGGGGAAGATGGCTGCGGTA
ADR01_0075_A01.b : xxxxxxxxxxxxxxxxxxxxxxCTCTTTAGGTCCGGCCCTCGGGGAAGATGGCTGCGGTA
ADR01_0076_E03.b : xxxxxxxxxxxxxxxxxxxxxxCTCTTTAGGTCCGGCCCTCGGGAAAGATGGCTGCGGTA
ITT01_0044_F06.b : xxxxxxxxxxxxxxxxxxxxxxCTCTTTAGGTCCGGCCCTCGGGAGAGATGGCTGCGGTA
UTR01_0085_G01.b : xxxxxxxxxxxxxxxxxxxxxxCTCTTTAGGTCCGGCCCTCGGGAAAGATGGCTGCGGTA
OVR01_0053_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxTAGGTCCGGCCCTCGGGAAAGACGGCTGCGGTA
THY01_0014_F03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGTCCGGCCCTCGGGAAAGATGGCTGCGGTA
SKNB1_0023_A11.b : aannnnnnncctacgttggcacggctctttagtCGGCCCTCGGGAA*GATGGCTGCGGTA
20110601C-007275 : CAGGCGGCTGAAGTTAAAGTGGACGGCGCGGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
---------+---------+---------+---------+---------+---------+ 98
SMG01_0067_F07.b : CAGGCGGCTGAAGTTAAAGTGGACGGCGCGGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
TCH01_0017_E04.b : CAAGCGGCTGAAGTTAAAGTGGACGGCGCGGAGCCTAAACTGAGCAAAAAGTGGTGGTAA
ADR01_0037_F08.b : CAGGCGGCTGAAGTTAAAGTGGACGGCGCCGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
ADR01_0075_A01.b : CAGGCGGCTGAAGTTAAAGTGGACGGCGCCGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
ADR01_0076_E03.b : CAGGCGGCTGAAGTTAAAGTGGACGGCGCGGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
ITT01_0044_F06.b : CAGGCGGCTGAAGTTAAAGTGGACGGCGCGGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
UTR01_0085_G01.b : CAGGCGGCTGAAGTTAAAGTGGACGGCGCGGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
OVR01_0053_G03.b : CAGGCGGCTGAAGTTAAAGTGGACGGCGCGGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
THY01_0014_F03.b : CAGGCGGCTGAAGTTAAAGTGGACGGCGCGGAGCCGAAACTGAGCAAAAAGTGGTGGTAA
SKNB1_0023_A11.b : CAGGCGGCTCCA*TTAAAGTGGACGGCGCGGAGCCGAAACTGAGCAAAAAGTCTTGGAAA
20110601C-007275 : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
---------+---------+---------+---------+---------+---------+ 158
SMG01_0067_F07.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
TCH01_0017_E04.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACACAAGCTGCTGTAAGGCTGGTTAGGGGG
ADR01_0037_F08.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
ADR01_0075_A01.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
ADR01_0076_E03.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
ITT01_0044_F06.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
UTR01_0085_G01.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
OVR01_0053_G03.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
THY01_0014_F03.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
SKNB1_0023_A11.b : TCATTAGTTCCAGGGTATTCTACCATGTTGACGCAAGCTGCTGTAAGGCTGGTTAGGGGG
20110601C-007275 : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
---------+---------+---------+---------+---------+---------+ 218
SMG01_0067_F07.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
TCH01_0017_E04.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
ADR01_0037_F08.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
ADR01_0075_A01.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
ADR01_0076_E03.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
ITT01_0044_F06.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
UTR01_0085_G01.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
OVR01_0053_G03.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
THY01_0014_F03.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
SKNB1_0023_A11.b : TCCCTGCGCCAAACCTCCTGGGCACAGTGGGGGCAGAGGGAGCTGCGCCTGTATCAACTT
20110601C-007275 : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
---------+---------+---------+---------+---------+---------+ 278
SMG01_0067_F07.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
TCH01_0017_E04.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
ADR01_0037_F08.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
ADR01_0075_A01.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
ADR01_0076_E03.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
ITT01_0044_F06.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
UTR01_0085_G01.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
OVR01_0053_G03.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
THY01_0014_F03.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
SKNB1_0023_A11.b : GCCCCTTTCACAACGATTCACAAGGACAAGCCACTTTCTGATAAAAGAAGTGAGCTAAAG
20110601C-007275 : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
---------+---------+---------+---------+---------+---------+ 338
SMG01_0067_F07.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
TCH01_0017_E04.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAATGAGCTCAGT
ADR01_0037_F08.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
ADR01_0075_A01.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
ADR01_0076_E03.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
ITT01_0044_F06.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
UTR01_0085_G01.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
OVR01_0053_G03.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
THY01_0014_F03.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAGGAGGCCAAGCAGAAGGAGCTCAGT
SKNB1_0023_A11.b : AGACGCCTTAAAGCTGAGAAGAAAATAGCAGAGAAAGAGGCCAAGCAGAAGGAGCTCAGT
20110601C-007275 : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
---------+---------+---------+---------+---------+---------+ 398
SMG01_0067_F07.b : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
TCH01_0017_E04.b : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
ADR01_0037_F08.b : GAGAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
ADR01_0075_A01.b : GAGAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
ADR01_0076_E03.b : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
ITT01_0044_F06.b : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
UTR01_0085_G01.b : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
OVR01_0053_G03.b : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
THY01_0014_F03.b : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGACAATGGCGTT
SKNB1_0023_A11.b : GAAAAACAGCTAAGCCAGGCCACCACTGCTGCCACCAACCACACCACTGATTATGGCGTT
20110601C-007275 : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
---------+---------+---------+---------+---------+---------+ 458
SMG01_0067_F07.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
TCH01_0017_E04.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
ADR01_0037_F08.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
ADR01_0075_A01.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
ADR01_0076_E03.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
ITT01_0044_F06.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
UTR01_0085_G01.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
OVR01_0053_G03.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
THY01_0014_F03.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
SKNB1_0023_A11.b : GCTGCGGAGGAGGAGAGCCTGGACCCAAATCAATACTTCAAAATCCGCAGCCAGGCAGTG
20110601C-007275 : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
---------+---------+---------+---------+---------+---------+ 518
SMG01_0067_F07.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
TCH01_0017_E04.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
ADR01_0037_F08.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
ADR01_0075_A01.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
ADR01_0076_E03.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
ITT01_0044_F06.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
UTR01_0085_G01.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
OVR01_0053_G03.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
THY01_0014_F03.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
SKNB1_0023_A11.b : CACCAACTGAAGGTCAGTGGGGAAGACCCATACCCACACAAGTTCCACGTCGACATCTCG
20110601C-007275 : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
---------+---------+---------+---------+---------+---------+ 578
SMG01_0067_F07.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
TCH01_0017_E04.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
ADR01_0037_F08.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
ADR01_0075_A01.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
ADR01_0076_E03.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
ITT01_0044_F06.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
UTR01_0085_G01.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
OVR01_0053_G03.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
THY01_0014_F03.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGGGACCACCTGACTGACATC
SKNB1_0023_A11.b : CTCACTCACTTCATCGAAGAATACAGTCACCTGCAGCCTGGAGACCACCTGACTGACATC
20110601C-007275 : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
---------+---------+---------+---------+---------+---------+ 638
SMG01_0067_F07.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
TCH01_0017_E04.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
ADR01_0037_F08.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGTAAGCTCATCTTC
ADR01_0075_A01.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGTAAGCTCATCTTC
ADR01_0076_E03.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
ITT01_0044_F06.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
UTR01_0085_G01.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
OVR01_0053_G03.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
THY01_0014_F03.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
SKNB1_0023_A11.b : ACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTC
20110601C-007275 : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
---------+---------+---------+---------+---------+---------+ 698
SMG01_0067_F07.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
TCH01_0017_E04.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
ADR01_0037_F08.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
ADR01_0075_A01.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
ADR01_0076_E03.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
ITT01_0044_F06.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
UTR01_0085_G01.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
OVR01_0053_G03.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
THY01_0014_F03.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
SKNB1_0023_A11.b : TATGACCTTCGAGGAGAGGGGGTCAAGTTGCAAGTCATGGCCAATTCCAGGAATTATAAA
20110601C-007275 : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
---------+---------+---------+---------+---------+---------+ 758
SMG01_0067_F07.b : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
TCH01_0017_E04.b : TCAGAAGAAGAATTTGTTCGTATNCATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
ADR01_0037_F08.b : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
ADR01_0075_A01.b : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
ADR01_0076_E03.b : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
ITT01_0044_F06.b : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
UTR01_0085_G01.b : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
OVR01_0053_G03.b : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
THY01_0014_F03.b : TCAGAAGAAGAATTTG*TCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
SKNB1_0023_A11.b : TCAGAAGAAGAATTTGTTCGTATCAATAACAAACTGCGCCGGGGCGACATAATTGGAGTT
20110601C-007275 : CAGGGCAGTCCTGGGAAAACCAAGAAGGGTGAGCTGAGCATCATTCCCTATGAGATCACG
---------+---------+---------+---------+---------+---------+ 818
SMG01_0067_F07.b : CAGGGCAGTCCTGGGAAAACCAAGAAGG*TGAGCTGAGCATCATTCCCTATGAAATCACG
TCH01_0017_E04.b : CAGGGCAGTCCTGGGAAAA*CAAGAAGGGTGAGCTGAGCATCATTCCCTATGAGATCACG
ADR01_0037_F08.b : CAGGGCAATCCTGGGAAAACCAAGAAGGGTGAGCTGAGCATCATTCCCTATGAGATCACA
ADR01_0075_A01.b : CAGGGCAATCCTGGGAAAACC*AGAANGGTGAGCTGAGCATCATTCCCTATGAGATCACA
ADR01_0076_E03.b : CAGGGCAGTCCTGGGAAAACCAAGAAGGGTGAGCTGAGCATCATTCCCTATGAGATCACG
ITT01_0044_F06.b : CAGGGCAGTCCTGGGAAAACCAAGAAGGGTGAGCTGAGCATCATTCCCTATGAGATCACG
UTR01_0085_G01.b : CAGGGCAGTCCTGGGAAAAC*AAGAAGGGTGAGCTGAGCATCATTCCCTATGAGATCACG
OVR01_0053_G03.b : CAGGGCAGTCCTGGGAAAACC*AGAAAGGTGAGCTGAGCATCATTCCCTATGAGATCACG
THY01_0014_F03.b : CAGGGCAGTTCTGGGAAA*CCAAGAAGGGTGAGCTGAGCATCATTCCCTATGAGATCACc
SKNB1_0023_A11.b : CAGGGCAGTCCTGGGAAAACCAAGAAGGGTGAGCTGAGCATCATTCCCTATGAGATCACG
20110601C-007275 : CTGCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTGGCCCCCAGGACAAGGAA
---------+---------+---------+---------+---------+---------+ 878
SMG01_0067_F07.b : CTGCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTGGCCTCAAGGACAAGAAA
TCH01_0017_E04.b : CTGCTGTCTCCTTGCTTGCACATGTTACCTCATNCTCACTTTGGCCTCAAGGACAA*GAA
ADR01_0037_F08.b : CTCCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTTGGCTCAAGGACAAGGAA
ADR01_0075_A01.b : CTCCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTTGGCCTCAGGACAAGGAA
ADR01_0076_E03.b : CTGCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTGGCCCTCAGGACAAGGAA
ITT01_0044_F06.b : CTGCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTGGCCCTCAGGGACAGGAA
UTR01_0085_G01.b : CTGCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTGGCCTCAAGGACAAGGAA
OVR01_0053_G03.b : CTGCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTGGCCTCAAGGACAAGGAA
THY01_0014_F03.b :
SKNB1_0023_A11.b : CTGCTGTCTCCTTGCTTGCACATGTTACCTCATCTTCACTTTGGCCCCCAGGACAAGGAA
20110601C-007275 : ACACGGTATCGTCAGCGATACTTGGACTTGATCCTGAATGACTTCGTGAGGCAGAAATTT
---------+---------+---------+---------+---------+---------+ 938
SMG01_0067_F07.b : ACACGtatcgtcaccgaaactggaactgaatctgaatgaactccgaagcaaaaattttca
TCH01_0017_E04.b : ACACNGTATCGTCAGCGATACTTGGACTTGATCCTGAAatgactcgtgaggcaaaaatta
ADR01_0037_F08.b : ACACGGTATCGTCAGCGATACTTGGACTTGATCCTGAATGACTTCGTGAGGCAGAAATTT
ADR01_0075_A01.b : ACACNGTATCGTCAGCGATACTTGGACTTTGATCTGAATGACTTCGTGAGGCAG*AATTT
ADR01_0076_E03.b : ACACGGTATCGTCAGCGATACTTGGACTTGATCCTGAATGACTTCGTGAGGCAG*AATTT
ITT01_0044_F06.b : ACACGGTATCGTCAGCGATACTTGGACTTGATCCTGAATGACTTCGTGAGGCAGAAA*TT
UTR01_0085_G01.b : ACACG*TATCGTCAGCGATACTTGGACCTGATCCTGAATGACTTCGTGAGGCAAAAATTT
OVR01_0053_G03.b : ACACGGTATCGTCAGCGATACTTGGACTTGATCCTGAAGGAACTCCTGAGGCAAAAATTT
THY01_0014_F03.b :
SKNB1_0023_A11.b : ACACGGTATCGTCAGCGATACTTGGACTTGATCCTGAATGACTTCGTGAGGCAGAAATTT
20110601C-007275 : ATCATCC*GCTCCAGATCATCACATACATAAGAAGTTTCTT*GGAAGCGTTGGAATTCCT
---------+---------+---------+---------+---------+---------+ 996
SMG01_0067_F07.b : ccggtccaaatcctccaatacataaaattttcttggagcgttggattccaaaaatgaaat
TCH01_0017_E04.b : tcatcccgctccagatcatccctacctaagaagttcctgggatgcttgggattcctaaaa
ADR01_0037_F08.b : ATCATCC*GCTCCAgatcacacatacataaaagtttcttggatgcctgggattctaaaga
ADR01_0075_A01.b : ATCATCC*GCTCCAGATCATCAatacataagaagtttctggatgcactgggattctagag
ADR01_0076_E03.b : ATCATCC*GCTCCAGATCATCACATACATAAGAgtttnctggnatgcgtgggattctaga
ITT01_0044_F06.b : ATCATCC*GCTCCAGATCATCACATACATAAGAAGTTTCTggatgcgtnnggatcctaga
UTR01_0085_G01.b : ATCATCCCGCTCAAGATCATCACCTACATAAGAAGTTTTCTTGGAAGCGTTGGGATTCCT
OVR01_0053_G03.b : ATCATCC*GCTCCAAaatattcaataa
THY01_0014_F03.b :
SKNB1_0023_A11.b : ATCATCCGCTCCAAGATCATCACATACATAAGAAGTTTCTT*GGATGCGTTGGAATTCCT
20110601C-007275 : AAAAATTGAA*CTCCCATGATGAACATCATCCCAGGGGG*AGCTGTGGCCAAGCCTTTTA
---------+---------+---------+---------+---------+---------+ 1054
SMG01_0067_F07.b : ccctggaaaaaatcttcccaggggactggggcacccctttttccctaccacacgggtggg
TCH01_0017_E04.b : ttggactccctgatgaaatcttccagggggagcggggcaacctttttcactacccacgag
ADR01_0037_F08.b : tgaaactccatgatgacatcattccaaggggaccttgggccagccttttacccctacccc
ADR01_0075_A01.b : atgaaactccatgatgacatcatccagggggactgtggccagcctttnatcactacccat
ADR01_0076_E03.b : gattgaactccatgatgacatcatcccagggggactgtggncagccttttatcactacac
ITT01_0044_F06.b : gatgaanctcccatgatgacatctccaaggggagctgtggccagcctttatcactacaca
UTR01_0085_G01.b : AAAAATTGAAACTTCCCTGATGAACCTCCTCCCAGGGGGGAGCTGTGGCCaacctttttt
OVR01_0053_G03.b :
THY01_0014_F03.b :
SKNB1_0023_A11.b : AGAGATTGAA*CTCCCATGATGAACATCATCCCAGGGGG*AGCTGTGGCCAAGCCTTTTA
20110601C-007275 : TCACCTACCACACGAGCTGGA.......................................
---------+---------+---------+---------+---------+---------+ 1075
SMG01_0067_F07.b : attgattttacttgaaatgtcccaacccccccaaaaaccggggcccgggtttttccgggg
TCH01_0017_E04.b : cggcatgaatttcctgaaaatgtccgagcccccaaaaaactggggccggaattaacgggt
ADR01_0037_F08.b : aggagctggacttgaattatactgaaaaatgctccaaacctaccaaaaaaccggggggcg
ADR01_0075_A01.b : gactggactgaattatcatgagaatgctcccaccccccaaaaatgccggggtcggggatt
ADR01_0076_E03.b : agagctggactgatttatactgagaatgctcccaactctcctaagagctgtggtcggggt
ITT01_0044_F06.b : cgagctggactgattnatactgagaatgctccgacctacataaaagctggtgtcgtgtta
UTR01_0085_G01.b : tccctacccaccagctgggacatgat
OVR01_0053_G03.b :
THY01_0014_F03.b :
SKNB1_0023_A11.b : TCACCTACCACACGAGCTGGActgaattttacatgaga
20110601C-007275 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
SMG01_0067_F07.b : ttaaatttgcaccctcccgaaaaagaaaattttttaccaaccccatttcccctgtatttt
TCH01_0017_E04.b : ttaaaatgaccccttccgaaaagaaaaaattgcccaaccgggttcccccggaattaatgg
ADR01_0037_F08.b : ggggaattaaccgggtaaaaaatggaacccctttccgaaagagaaatcaatttactcaaa
ADR01_0075_A01.b : gacgggtgttaaatggaccccttctgaagaggatcatttgcccaatccgatttccccggg
ADR01_0076_E03.b : atgaccgggtgttaaattgaccccttccgaagaaggacaattgacccaacccgagtcccc
ITT01_0044_F06.b : tgaccgtgtataattgacccnntcaaatgaggatcattaacctcatcgagtcccccggga
UTR01_0085_G01.b :
OVR01_0053_G03.b :
THY01_0014_F03.b :
SKNB1_0023_A11.b :
20110601C-007275 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
SMG01_0067_F07.b : tggggttgggggaacaaattctggaaacaaaaaaaggtttctgggtggaaccattagggt
TCH01_0017_E04.b : ctgggacacacatttggaacaaaaaaagttggggggaaaaataggttagtttcccccagc
ADR01_0037_F08.b : ccccgtttccccccggagattttagggcttaggggaaaaacaattttggaaaacaaaaaa
ADR01_0075_A01.b : gtttcatgccttgggaaatcaattttgaaaccaaaaaggtttcgggggaacaatataggt
ADR01_0076_E03.b : cggagattcatggcttgcgaacccgattctggaacacaaaaaggttcggggggggcatta
ITT01_0044_F06.b : ttcatggcttgggaacccattcctgaaaccggaaagtttcgagggaaactaaggtttagg
UTR01_0085_G01.b :
OVR01_0053_G03.b :
THY01_0014_F03.b :
SKNB1_0023_A11.b :
20110601C-007275 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
SMG01_0067_F07.b : tgtgtgtcccccccaggaggcgagggcgctaaattttcccccccccacacccggggagaa
TCH01_0017_E04.b : ccaggaccaaaaattccccccacacagggaaggaagcgaaggcgccttaaaacaattatt
ADR01_0037_F08.b : agttctcggggggaaacttttgggtttagggtttcatctaagggccaggggggcccaaaa
ADR01_0075_A01.b : taggttccccccagggcaaggggca
ADR01_0076_E03.b : gggttagttccctccctggccgggacctaattttccccccccaaaaggggggagaaggcg
ITT01_0044_F06.b : ttcccccaggccagggcctaattttcccctcccaaccggggaaaaaaccggaaccccccc
UTR01_0085_G01.b :
OVR01_0053_G03.b :
THY01_0014_F03.b :
SKNB1_0023_A11.b :
20110601C-007275 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
SMG01_0067_F07.b : aaaaacgggaaacgcgcacctttgagaacaatattttttgtggggaggaccccacacccc
TCH01_0017_E04.b : ggagtgccccgccc
ADR01_0037_F08.b : ttttcccccctccaaaactggggaaaataaaccgaagagggcaatcttttaaaaaaactt
ADR01_0075_A01.b :
ADR01_0076_E03.b : ggaggcgccctctaagaaaaattttttgtggggggccccccccctcgcgggggggaaaaa
ITT01_0044_F06.b : ctttgaaaaaattatttgtgggagccccccccccccggtgggggagacttctcacccgcc
UTR01_0085_G01.b :
OVR01_0053_G03.b :
THY01_0014_F03.b :
SKNB1_0023_A11.b :
20110601C-007275 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
SMG01_0067_F07.b : cgtggggggggacctttgtcaaccgcgggggtttaa
TCH01_0017_E04.b :
ADR01_0037_F08.b : tttgtggggggggcccccccccccc
ADR01_0075_A01.b :
ADR01_0076_E03.b : caacaaacacc
ITT01_0044_F06.b : gcg
UTR01_0085_G01.b :
OVR01_0053_G03.b :
THY01_0014_F03.b :
SKNB1_0023_A11.b :