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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-007303

Length: 1,356

Sequence [FASTA format sequence]
AGCATCCTGG GGGAGAGAGG CCGCCTGGAC TCAGAGCTGA GGAGCATGCA GGACCTGGTG
GAGGACTTCA AGAACAAGTA TGAAGATGAA ATCAACAAGC GTACCACAGC CGAGAATGAA
TTTGTGATGC TGAAGAAGGA TGTGGACGCC GCCTACATGA ACAAGGTGGA GTTGGAAGCC
AAGGTCGATG CACTGATGGA TGAGATCAAC TTCACGAAGA TGTTCTTTGA GGCGGAGCTG
TCCCAGATGC AGACACATGT CTCAGACACG TCTGTGGTCC TCTCTATGGA CAACAACCGC
AACCTGGACC TGGACAGCAT CATCGCCGAG GTCAAGGCCC AGTACGAGGA CATCGCCAAC
CGCAGCCGCA CGGAAGCCGA GTCCTGGTAC CAGACCAAGT ACGAAGAGCT GCAGCAGACA
GCTGGCCGGC ATGGTGATGA TCTCCGCAAC ACCAAGCATG AGATCTCTGA AATGAACAGG
ATGATCCAGA GGCTGAGAGC TGAGATCGAC AACGTCAAGA AGCAGTGCGC CAACCTGCAG
AATGCCATTG CTGATGCTGA GCAGCGTGGG GAGCTGGCCC TCAAGGACGC CAGGAACAAG
CTGGCCGAGC TGGAGGATGC CCTGCAGAAG GCCAAGCAGG ACATGGCCCG GCTGCTGAGG
GAGTACCAGG AGCTCATGAA CACCAAGCTG GCCCTGGACG TGGAGATCGC CACCTACAGG
AAGCTGCTGG AGGGCGAGGA GTGCAGATTG AGTGGAGAAG GTGTTGGACC AGTCAATATC
TCGGTCGTCA CAAACACCCT CTCCTCTGGC TATGGCGGTG GCAGTGGCTT TGGTGGCGGC
CTCGGCGGTG GCCTCGGTGG TGGCCTCGGG GGCGGCCTCG GTGGAGGTCT GGGCGGTGGA
ATTGGTGGAG GTGGTGGCAG CAGCTACTAC TCCAGCAGCA GCAGCGGGGG TGTAGGCCTT
GGCGGTGGGC TCAGCGTGGG GGGCGCTGGC TTCAGTTCAA GCAGTGGCCG AAGCCTGGGC
TTTGGCAGTG GCGGAGGCAG CAGCTCCAGT GTCAAATTTG TCTCCACCAC CTCCTCCTCC
CGGAAGAGCT TCAAGAGCTA AGAGCCTCCA GCAAGTCACT GTCTCCCAGC TGCAGCAGCG
GCTGGCTATG GCGCTCCCTC TTCTCGGTGG TTGCCCCAGG CCAGTTTTCT CTTTTTTCTG
AAGCGTAGTC AATCAAGCCT ATTGCAGACC CACGTTCTTG GGNTCCTGGA GGTGCAGCCC
CCACTTTCTA GTCTTCTGTG TCCCGATTCC ACGCTCTGCT TCAATCAGCC TTTGGGTCTC
TACAGCCTGC TCTTTGGAGA TGAATCCAAA GTTTTC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKRT5keratin, type II cytoskeletal 5 [Homo sapiens]. 504e-143
Contig/Assembly ProteinKRT6Akeratin, type II cytoskeletal 6A [Homo sapiens]. 452e-127
Contig/Assembly ProteinKRT6Bkeratin, type II cytoskeletal 6B [Homo sapiens]. 449e-126
Contig/Assembly ProteinKRT6Ckeratin, type II cytoskeletal 6C [Homo sapiens]. 448e-126
Contig/Assembly ProteinKRT75keratin, type II cytoskeletal 75 [Homo sapiens]. 444e-125
Contig/Assembly ProteinKRT3keratin, type II cytoskeletal 3 [Homo sapiens]. 400e-111
Contig/Assembly ProteinKRT76keratin, type II cytoskeletal 2 oral [Homo sapiens]. 397e-110
Contig/Assembly ProteinKRT7keratin, type II cytoskeletal 7 [Homo sapiens]. 386e-107
Contig/Assembly ProteinKRT4keratin, type II cytoskeletal 4 [Homo sapiens]. 381e-106
Contig/Assembly ProteinKRT73keratin, type II cytoskeletal 73 [Homo sapiens]. 379e-105


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKrt5keratin, type II cytoskeletal 5 [Mus musculus]. 498e-141
Contig/Assembly ProteinKrt6akeratin, type II cytoskeletal 6A [Mus musculus]. 451e-127
Contig/Assembly ProteinKrt6bkeratin, type II cytoskeletal 6B [Mus musculus]. 448e-126
Contig/Assembly ProteinKrt75keratin, type II cytoskeletal 75 [Mus musculus]. 444e-125
Contig/Assembly Protein4732456N10Rikhypothetical protein LOC239673 [Mus musculus]. 432e-121
Contig/Assembly ProteinKrt76keratin, type II cytoskeletal 2 oral [Mus musculus]. 388e-108
Contig/Assembly ProteinKrt4keratin, type II cytoskeletal 4 [Mus musculus]. 387e-107
Contig/Assembly ProteinKrt7keratin, type II cytoskeletal 7 [Mus musculus]. 385e-107
Contig/Assembly ProteinKrt73keratin, type II cytoskeletal 73 [Mus musculus]. 381e-106
Contig/Assembly ProteinGm5414type II keratin Kb14 [Mus musculus]. 376e-104


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC486523PREDICTED: similar to Keratin, type II cytoskeletal 6A (Cytokeratin 6A) (CK 6A) (K6a keratin) isoform 3 [Canis familiaris]. 460e-129
Contig/Assembly ProteinLOC486523PREDICTED: similar to Keratin, type II cytoskeletal 6A (Cytokeratin 6A) (CK 6A) (K6a keratin) isoform 2 [Canis familiaris]. 460e-129
Contig/Assembly ProteinLOC486524PREDICTED: similar to cytokeratin type II [Canis familiaris]. 445e-125
Contig/Assembly ProteinLOC477602PREDICTED: similar to Keratin, type II cytoskeletal 7 (Cytokeratin 7) (K7) (CK 7) (Sarcolectin) [Canis familiaris]. 383e-106
Contig/Assembly ProteinLOC486520PREDICTED: similar to keratin protein K6irs [Canis familiaris]. 383e-106
Contig/Assembly ProteinLOC608027PREDICTED: similar to keratin 6 irs3 [Canis familiaris]. 383e-106
Contig/Assembly ProteinKRT1keratin, type II cytoskeletal 1 [Canis lupus familiaris]. 376e-104
Contig/Assembly ProteinLOC486515PREDICTED: similar to keratin 6L [Canis familiaris]. 370e-102
Contig/Assembly ProteinKRT76keratin, type II cytoskeletal 2 oral [Canis lupus familiaris]. 368e-102
Contig/Assembly ProteinKRT71keratin 71 [Canis lupus familiaris]. 367e-101


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKRT5keratin, type II cytoskeletal 5 [Bos taurus]. 504e-143
Contig/Assembly ProteinKRT6Akeratin 6A [Bos taurus]. 459e-129
Contig/Assembly ProteinKRT6CPREDICTED: keratin 6C isoform 2 [Bos taurus]. 456e-128
Contig/Assembly ProteinKRT6CPREDICTED: keratin 6C isoform 1 [Bos taurus]. 456e-128
Contig/Assembly ProteinKRT6CPREDICTED: keratin 6C isoform 2 [Bos taurus]. 456e-128
Contig/Assembly ProteinKRT6CPREDICTED: keratin 6C isoform 3 [Bos taurus]. 456e-128
Contig/Assembly ProteinKERIVPREDICTED: cytokeratin type II, component IV isoform 2 [Bos taurus]. 456e-128
Contig/Assembly ProteinKERIVPREDICTED: cytokeratin type II, component IV isoform 1 [Bos taurus]. 456e-128
Contig/Assembly ProteinLOC786903PREDICTED: keratin 6A-like [Bos taurus]. 456e-128
Contig/Assembly ProteinKERIVPREDICTED: cytokeratin type II, component IV isoform 3 [Bos taurus]. 456e-128


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKRT5PREDICTED: keratin, type II cytoskeletal 5 [Sus scrofa]. 515e-146
Contig/Assembly ProteinLOC100621351PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa]. 437e-123
Contig/Assembly ProteinLOC100525745PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa]. 410e-115
Contig/Assembly ProteinLOC100157304PREDICTED: keratin, type II cytoskeletal 71-like [Sus scrofa]. 385e-107
Contig/Assembly ProteinKRT79PREDICTED: keratin, type II cytoskeletal 79 [Sus scrofa]. 384e-107
Contig/Assembly ProteinKRT4PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 4 [Sus scrofa]. 377e-105
Contig/Assembly ProteinLOC100155249PREDICTED: keratin, type II cytoskeletal 3-like [Sus scrofa]. 372e-103
Contig/Assembly ProteinK6-IRS1PREDICTED: keratin, type II cytoskeletal 73 [Sus scrofa]. 365e-101
Contig/Assembly ProteinKRT74keratin 74 [Sus scrofa]. 365e-101
Contig/Assembly ProteinKRT2keratin, type II cytoskeletal 2 epidermal [Sus scrofa]. 3523e-97


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ILNT10075B07ILNT1_0075_B07.bHX232710 
SKNB10016F03SKNB1_0016_F03.bDB800880 
SKNB10035C09SKNB1_0035_C09.bDB801893 
SKNB10044B03SKNB1_0044_B03.bDB802453 
SKNB10053F12SKNB1_0053_F12.bDB803146 AK400921
SKNB10096C05SKNB1_0096_C05.bDB805752 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
543C200.333WSAAC/N
T400.667AAT/N
606C400.667WSGCC/A
T200.333GCT/A


Alignment:      TOP

20110601C-007303 : .........................AGCATCCTGGGGGAGAGAGGCCGCCTGGACTCAGA
---------+---------+---------+---------+---------+---------+ 35
SKNB1_0053_F12.b : nnnnttttcactgtggctctggggaAGCATCCTGGGGGAGAGAGGCCGCCTGGACTCAGA
SKNB1_0016_F03.b :
ILNT1_0075_B07.b :
SKNB1_0044_B03.b :
SKNB1_0035_C09.b :
SKNB1_0096_C05.b :
20110601C-007303 : GCTGAGGAGCATGCAGGACCTGGTGGAGGACTTCAAGAACAAGTATGAAGATGAAATCAA
---------+---------+---------+---------+---------+---------+ 95
SKNB1_0053_F12.b : GCTGAGGAGCATGCAGGACCTGGTGGAGGACTTCAAGAACAAGTATGAAGATGAAATCAA
SKNB1_0016_F03.b : nnnnggtaannnnnncctgcgttggctcgggttgtgatgAATCAA
ILNT1_0075_B07.b :
SKNB1_0044_B03.b :
SKNB1_0035_C09.b :
SKNB1_0096_C05.b :
20110601C-007303 : CAAGCGTACCACAGCCGAGAATGAATTTGTGATGCTGAAGAAGGATGTGGACGCCGCCTA
---------+---------+---------+---------+---------+---------+ 155
SKNB1_0053_F12.b : CAAGCGTACCACAGCCGAGAATGAATTTGTGATGCTGAAGAAGGATGTGGACGCCGCCTA
SKNB1_0016_F03.b : CAAGCGTACCACAGCCGAGAATGAATTTGTGATGCTGAAGAAGGATGTGGACGCCGCCTA
ILNT1_0075_B07.b : nnnncgatagtacg
SKNB1_0044_B03.b :
SKNB1_0035_C09.b :
SKNB1_0096_C05.b :
20110601C-007303 : CATGAACAAGGTGGAGTTGGAAGCCAAGGTCGATGCACTGATGGATGAGATCAACTTCAC
---------+---------+---------+---------+---------+---------+ 215
SKNB1_0053_F12.b : CATGAACAAGGTGGAGTTGGAAGCCAAGGTCGATGCACTGATGGATGAGATCAACTTCAC
SKNB1_0016_F03.b : CATGAACAAGGTGGAGCTGGAAGCCAAGGTCGATGCACTGATGGATGAGATCAACTTCAC
ILNT1_0075_B07.b : aggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGATCAACTTCAC
SKNB1_0044_B03.b : nngggtttttaannncc
SKNB1_0035_C09.b :
SKNB1_0096_C05.b :
20110601C-007303 : GAAGATGTTCTTTGAGGCGGAGCTGTCCCAGATGCAGACACATGTCTCAGACACGTCTGT
---------+---------+---------+---------+---------+---------+ 275
SKNB1_0053_F12.b : GAAGATGTTCTTTGAGGCGGAGCTGTCCCAGATGCAGACACATGTCTCAGACACGTCTGT
SKNB1_0016_F03.b : GAAGATGTTCTTTGAGGCGGAGCTGTCCCAGATGCAGACACATGTCTCAGACACGTCTGT
ILNT1_0075_B07.b : GAAGATGTTCTTTGAGGCGGAGCTGTCCCAGATGCAGACACATGTCTCAGACACATCTGT
SKNB1_0044_B03.b : tgcgctgtgctttgtttgagggagctgtcccgatgcaACACATGTCTCAGACACATCTGT
SKNB1_0035_C09.b : nnnccgttnnnnnnncctgcgttggctacggtcgg
SKNB1_0096_C05.b : nn
20110601C-007303 : GGTCCTCTCTATGGACAACAACCGCAACCTGGACCTGGACAGCATCATCGCCGAGGTCAA
---------+---------+---------+---------+---------+---------+ 335
SKNB1_0053_F12.b : GGTCCTCTCTATGGACAACAACCGCAACCTGGACCTGGACAGCATCATCGCCGAGGTCAA
SKNB1_0016_F03.b : GGTCCTCTCTATGGACAACAACCGCAACCTGGACCTGGACAGCATCATCGCCGAGGTCAA
ILNT1_0075_B07.b : GGTCCTCTCTATGGACAACAACCGCAACCTGGACCTGGACAGCATCATCGCCGAGGTCAA
SKNB1_0044_B03.b : GGTCTTCTCTATGGACAACAACCGCAACCTGGACCTGGACAGCATCATCGCCGAGGTCAA
SKNB1_0035_C09.b : GGTCCTCTCTATGGACA*CAACCGCAACCTGGACCTGGACAGCATCTTCGCCGAGGTCAA
SKNB1_0096_C05.b : nnncccacagtggctacggacaccgcACCTGGACCTGGACAGCATCATCGCCGAGGTCAA
20110601C-007303 : GGCCCAGTACGAGGACATCGCCAACCGCAGCCGCACGGAAGCCGAGTCCTGGTACCAGAC
---------+---------+---------+---------+---------+---------+ 395
SKNB1_0053_F12.b : GGCCCAGTACGAGGACATCGCCAACCGCAGCCGCACGGAAGCCGAGTCCTGGTACCAGAC
SKNB1_0016_F03.b : GGCCCAGTACGAGGACATCGCCAACCGCAGCCGCACGGAAGCCGAGTCCTGGTACCAGAC
ILNT1_0075_B07.b : GGCCCAGTACGAGGACATCGCCAACCGCAGCCGCACGGAAGCCGAGTCCTGGTACCAGAC
SKNB1_0044_B03.b : GGCCCAGTACGAGGACATCGCCAACCGCAGCCGCACGGAAGCCGAGTCCTGGTACCAGAC
SKNB1_0035_C09.b : GGCCCAGTACGAGGACATCGCCAACCGCAGCCGCACGGAAGCCGAGTCCTGGTACCAGAC
SKNB1_0096_C05.b : GGCCCAGTACGAGGACATCGCCAACCGCAGCCGCACGGAAGCCGAGTCCTGGTACCAGAC
20110601C-007303 : CAAGTACGAAGAGCTGCAGCAGACAGCTGGCCGGCATGGTGATGATCTCCGCAACACCAA
---------+---------+---------+---------+---------+---------+ 455
SKNB1_0053_F12.b : CAAGTACGAAGAGCTGCAGCAGACAGCTGGCCGGCATGGTGATGATCTCCGCAACACCAA
SKNB1_0016_F03.b : CAAGTACGAAGAGCTGCAGCAGACAGCTGGCCGGCATGGTGATGATCTCCGCAACACCAA
ILNT1_0075_B07.b : CAAGTACGAAGAGCTGCAGCAGACAGCTGGCCGGCATGGTGATGATCTCCGCAACACCAA
SKNB1_0044_B03.b : CAAGTACGAAGAGCTGCAGCAGACAGCTGGCCGGCATGGTGATGATCTCCGCAACACCAA
SKNB1_0035_C09.b : CAAGTACGAAGAGCTGCAGCAGACAGCTGGCCGGCATGGTGATGATCTCCGCAACACCAA
SKNB1_0096_C05.b : CAAGTACGAAGAGCTGCAGCAGACAGCTGGCCGGCATGGTGATGATCTCCGCAACACCAA
20110601C-007303 : GCATGAGATCTCTGAAATGAACAGGATGATCCAGAGGCTGAGAGCTGAGATCGACAACGT
---------+---------+---------+---------+---------+---------+ 515
SKNB1_0053_F12.b : GCATGAGATCTCTGAAATGAACAGGATGATCCAGAGGCTGAGAGCTGAGATCGACAACGT
SKNB1_0016_F03.b : GCATGAGATCTCTGAAATGAACAGGATGATCCAGAGGCTGAGAGCTGAGATCGACAACGT
ILNT1_0075_B07.b : GCATGAGATCTCTGAAATGAACAGGATGATCCAGAGGCTGAGAGCTGAGATCGACAACGT
SKNB1_0044_B03.b : GCATGAGATCTCTGAAATGAACAGGATGATCCAGAGGCTGAGAGCTGAGATCGACAACGT
SKNB1_0035_C09.b : GCATGAGATCTCTGAAATGAACAGGATGATCCAGAGGCTGAGAGCTGAGATCGACAACGT
SKNB1_0096_C05.b : GCATGAGATCTCTGAAATGAACAGGATGATCCAGAGGCTGAGAGCTGAGATCGACAACGT
20110601C-007303 : CAAGAAGCAGTGCGCCAACCTGCAGAATGCCATTGCTGATGCTGAGCAGCGTGGGGAGCT
---------+---------+---------+---------+---------+---------+ 575
SKNB1_0053_F12.b : CAAGAAGCAGTGCGCCAACCTGCAGAACGCCATTGCCGATGCCGAGCAGCGTGGGGAGCT
SKNB1_0016_F03.b : CAAGAAGCAGTGCGCCAACCTGCAGAACGCCATTGCCGATGCCGAGCAGCGTGGGGAGCT
ILNT1_0075_B07.b : CAAGAAGCAGTGCGCCAACCTGCAGAATGCCATTGCTGATGCTGAGCAGCGTGGGGAGCT
SKNB1_0044_B03.b : CAAGAAGCAGTGCGCCAACCTGCAGAATGCCATTGCTGATGCTGAGCAGCGTGGGGAGCT
SKNB1_0035_C09.b : CAAGAAGCAGTGCGCCAACCTGCAGAATGCCATTGCTGATGCTGAGCAGCGTGGGGAGCT
SKNB1_0096_C05.b : CAAGAAGCAGTGCGCCAACCTGCAGAATGCCATTGCTGATGCTGAGCAGCGTGGGGAGCT
20110601C-007303 : GGCCCTCAAGGACGCCAGGAACAAGCTGGCCGAGCTGGAGGATGCCCTGCAGAAGGCCAA
---------+---------+---------+---------+---------+---------+ 635
SKNB1_0053_F12.b : GGCCCTCAAGGACGCCAGGAACAAGCTGGCTGAGCTGGAGGATGCCCTGCAGAAGGCCAA
SKNB1_0016_F03.b : GGCCCTCAAGGACGCCAGGAACAAGCTGGCTGAGCTGGAGGATGCCCTGCAGAAGGCCAA
ILNT1_0075_B07.b : GGCCCTCAAGGACGCCAGGAACAAGCTGGCCGAGCTGGAGGATGCCCTGCAGAAGGCCAA
SKNB1_0044_B03.b : GGCCCTCAAGGACGCCAGGAACAAGCTGGCCGAGCTGGAGGATGCCCTGCAGAAGGCCAA
SKNB1_0035_C09.b : GGCCCTCAAGGACGCCAGGAACAAGCTGGCCGAGCTGGAGGATGCCCTGCAGAAGGCCAA
SKNB1_0096_C05.b : GGCCCTCAAGGACGCCAGGAACAAGCTGGCCGAGCTGGAGGATGCCCTGCAGAAGGCCAA
20110601C-007303 : GCAGGACATGGCCCGGCTGCTGAGGGAGTACCAGGAGCTCATGAACACCAAGCTGGCCCT
---------+---------+---------+---------+---------+---------+ 695
SKNB1_0053_F12.b : GCAGGACATGGCCCGGCTGCTGAGGGAGTACCAGGAGCTGATGAACACCAAGCTGGCCCT
SKNB1_0016_F03.b : GCAGGACATGGCCCGGCTGCTGAGGGAGTACCAGGAGCTGATGAACACCAAGCTGGCCCT
ILNT1_0075_B07.b : GCAGGACATGGCCCGGCTGCTGAGGGAGTACCAGGAGCTCATGAACACCAAGCTGGCCCT
SKNB1_0044_B03.b : GCAGGACATGGCCCGGCTGCTGAGGGAGTACCAGGAGCTCATGAACACCAAGCTGGCCCT
SKNB1_0035_C09.b : GCAGGACATGGCCCGGCTGCTGAGGGAGTACCAGGAGCTCATGAACACCAAGCTGGCCCT
SKNB1_0096_C05.b : GCAGGACATGGCCCGGCTGCTGAGGGAGTACCAGGAGCTCATGAACACCAAGCTGGCCCT
20110601C-007303 : GGACGTGGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGAGTGCAGATTGAGTGG
---------+---------+---------+---------+---------+---------+ 755
SKNB1_0053_F12.b : GGACGTGGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGAGTGCAGATTGAGTGG
SKNB1_0016_F03.b : GGACGTGGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGGGTGCAGATTGAGTGG
ILNT1_0075_B07.b : GGACGTGGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGAGTGCAGATTGAGTGG
SKNB1_0044_B03.b : GGACGTGGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGAGTGCAGATTGAGTGG
SKNB1_0035_C09.b : GGACGTGGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGAGTGCAGATTGAGTGG
SKNB1_0096_C05.b : GGACGTGGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGAGTGCAGATTGAGTGG
20110601C-007303 : AGAAGGTGTTGGACCAGTCAATATCTCGGTCGTCACAAACACCCTCTCCTCTGGCTATGG
---------+---------+---------+---------+---------+---------+ 815
SKNB1_0053_F12.b : AGAAAGTGTTGGACCAGTCAATATCTCGGTCGTCACAAACACCCTCTCCTCTGGCTATGG
SKNB1_0016_F03.b : AGAAGGTGTTGGACCAGTCAATATCTCGGTCGTCACAAACACTCTCTCCTCTGGCTATGG
ILNT1_0075_B07.b : AGAAGGTGTTGGACCAGTCAATATCTCGGTCGTCACAAACACCCTCTCCTCTGGCTATGG
SKNB1_0044_B03.b : AGAAGGTGTTGGACCAGTCAATATCTCGGTCGTCACAAACACCCTCTCCTCTGGCTATGG
SKNB1_0035_C09.b : AGAAGGTGTTGGACCAGTCAATATCTCGGTCGTCACAAACACCCTCTCCTCTGGCTATGG
SKNB1_0096_C05.b : AGAAGGTGTTGGACCAGTCAATATCTCGGTCGTCACAAACACCCTCTCCTCTGGCTATGG
20110601C-007303 : CGGTGGCAGTGGCTTTGGTGGCGGCC*TCGGCGGTGGCCTCGGTGGTGGCCTCGGGGGCG
---------+---------+---------+---------+---------+---------+ 874
SKNB1_0053_F12.b : CGGTGGCAGTGGCTTTGGTGGCGGCCNTCGGCGGTGGCCTCGGTGGTGGCCTCGGGGGCG
SKNB1_0016_F03.b : CGGTGGCAGTGGCTTTGGTGGCGGCC*TCGGCGGTGGCCTCGGTGGTGGCCTCGGGGGCG
ILNT1_0075_B07.b : CGGTGGCAGTGGCTTTGGTGGCGGCC*TCGGCGGTGGCCTCGGTGGTGGCCTCGGGGGCG
SKNB1_0044_B03.b : CGGTGGCAGTGGCTTTGGTGGCGGCC*TCGGCGGTGGCCTCGGTGGTGGCCTCGGGGGCG
SKNB1_0035_C09.b : CGGTGGCAGTGGCTTTGGTGGCGGCC*TCGGCGGTGGCCTCGGTGGTGGCCTCGGGGGCG
SKNB1_0096_C05.b : CGGTGGCAGTGGCTTTGGTGGCGGCC*TCGGCGGTGGCCTCGGTGGTGGCCTCGGGGGCG
20110601C-007303 : GCCTCGGTGGAGGTCTGGGCGGTGGAA*TTGGTGGAGG**TGGTGGCAGCAGCTACTACT
---------+---------+---------+---------+---------+---------+ 931
SKNB1_0053_F12.b : GCCTCGGTGGAGGTCTGGGCGGTGGAT*TTGGNTGAAAGTTGGTGGCAGCAGCTACTACT
SKNB1_0016_F03.b : GCCTCGGTGGAGGTCTGGGCGGTGGAT*TGGTGGGAAG**TGGTGGCAGCAGCTACTACT
ILNT1_0075_B07.b : GCCTCGGTGGAGGTCTGGGCGGTGGAA*TTGGTGGAGG**TGGTGGCAGCANCTACTACT
SKNB1_0044_B03.b : GCCTCGGTGGAGGTCTGGGCGGTGGAAATTGGTGGAAG**TGGTGGCAGCAGCTACTACT
SKNB1_0035_C09.b : GCCTCGGTGGAGGTCTGGGCGGTGGAA*TTGGTGGAGG**TGGTGGCAGCAGCTACTACT
SKNB1_0096_C05.b : GCCTCGGTGGAGGTCTGGGCGGTGGAA*TTGGTGGAGG**TGGTGGCAGCAGCTACTACT
20110601C-007303 : CCAGCAGCAGCAGCGGGGGTGTAGGCCTTGGCGGTGGGCTCAGCGTGGGGGGCGCTGGCT
---------+---------+---------+---------+---------+---------+ 991
SKNB1_0053_F12.b : CCAGCAACAGCAGCGGGGGCGTAGGCTTTGGCGtgggttcaagcgtggggggcgctgggc
SKNB1_0016_F03.b : CCAGCAGCAGCAGCGGGGGCGTAGGCCTTGGCGGTGGGCTCANCGTGGGGGGCGCTGGCT
ILNT1_0075_B07.b : CCAGCAGCAGCAGCGGGGGTGTAGGCCTTGGCGGTGGGCTCAACGTGGGGGGCGCTGGCT
SKNB1_0044_B03.b : CCAGCAGCAGCAGCGGGGGTGTAGGCCTTGGCGGTGGGCTCAGCGTGGGGGGCGCTGGCT
SKNB1_0035_C09.b : CCAGCAGCAGCAGCGGGGGTGTAGGCCTTGGCGGTGGGCTCAGCGTGGGGGGCGCTGGCT
SKNB1_0096_C05.b : CCAGCAGCAGCAGCGGGGGTGTAGGCCTTGGCGGTGGGCTCAGCGTGGGGGGCGCTGGCT
20110601C-007303 : TCAGTTCAAGCAGTGGCCGAAGCCTGGGCTTTGGCAGTGGCGGAGGCAGCAGCTCCAGTG
---------+---------+---------+---------+---------+---------+ 1051
SKNB1_0053_F12.b : tccgtttcaacaatgtcccaaacctgggctttgcccagtgcctgaagcaccacctccctt
SKNB1_0016_F03.b : TCANTTC*AGCAGTGGCCGAAGCCTGGGGCTTGGCAGTGGCGGAAGCAGCAGCTCCAGTG
ILNT1_0075_B07.b : TTCATTC*CAGCAATGGCCAAGCCTGGGCTTTGGCAGTGGCGGAGGCAGCCACTCCAGTG
SKNB1_0044_B03.b : TCAGTTCAAGCAGTGGCCGAAGCCTGGGCTTTGGCAGTGGCGGAGGCAGCAGCTCCAGTG
SKNB1_0035_C09.b : TCAGTTCAAGCAGTGGCCGAAGCCTGGGCTTTGGCAGTGGCGGAGGCAGCAGCTCCAGTG
SKNB1_0096_C05.b : TCAGTTCAAGCAGTGGCCGAAGCCTGGGCTTTGGCAGTGGCGGAGGCAGCAGCTCCAGTG
20110601C-007303 : TCAAATTTGTCTCCACCACCTCCTCCTCCCGGAAGAGCTTCAAGAGCTAAGAGCCTCCAG
---------+---------+---------+---------+---------+---------+ 1111
SKNB1_0053_F12.b : gtccaaattttttcccccacttccctcctcgcgaaaaactttccgaataaaaaacccccc
SKNB1_0016_F03.b : TCCAATTTGTCTCCACCACCTCCTCCCTCCGGAAGAGCNTTCAGAGCTAgagcctcccag
ILNT1_0075_B07.b : TTAAATTTGTCTCCACacctcctctccccgaagaccttcaaaactaaaagccttccagaa
SKNB1_0044_B03.b : TCAAATTTGTCTCCACCACCTCCTCCTCCCGGAAGAGCTTCAAGAGCTAAGAGCCTCCAG
SKNB1_0035_C09.b : TCAAATTTGTCTCCACCACCTCCTCCTCCCGGAAGAGCTTCAAGAGCTAAGAGCCTCCAG
SKNB1_0096_C05.b : TCAAATTTGTCTCCACCACCTCCTCCTCCCGGAAGAGCTTCAAGAGCTAAGAGCCTCCAG
20110601C-007303 : CAAGTCACTGTCTCCCAGCTGCAGCAGCGGCTGGCTATGGCGCTCCCTCTTCTCGGTGGT
---------+---------+---------+---------+---------+---------+ 1171
SKNB1_0053_F12.b : cccaatcc
SKNB1_0016_F03.b : cagtcctgtctcccagctgcaacaacggctggctatgggctccctcctcccgggggntgc
ILNT1_0075_B07.b : gtcatggtccccacctgcaaaagcggtgggtatgggccctcctcttccggggggtgcaca
SKNB1_0044_B03.b : CAAGTCACTGTCTCCCAGCTGCAGCAGCGGCTGGCTATGGCGCTCCCTCTTCTCGGTGGG
SKNB1_0035_C09.b : CAAGTCACTGTCTCCCAGCTGCAGCAGCGGCTGGCTATGGCGCTCCCTCTTCTCGGTGGT
SKNB1_0096_C05.b : CAAGTCACTGTCTCCCAGCTGCAGCAGCGGCTGGCTATGGCGCTCCCTNNCTCTCGTGGT
20110601C-007303 : TGCCCCAGGCCAGTTTTCTCTTTTTTCTGAAGCGTAGTCAATCAAGCCTATTGCAGACCC
---------+---------+---------+---------+---------+---------+ 1231
SKNB1_0053_F12.b :
SKNB1_0016_F03.b : tccagcccagttttctctt
ILNT1_0075_B07.b : accaatttttccctttttcgaaacggaatcaattagcctattgaaaacccagtttttttg
SKNB1_0044_B03.b : TGCCCCAGCCAAGTTTTCTCTTTTTTCTGAAGCGTAGTCNATCAAGCCTATTGCAGACCC
SKNB1_0035_C09.b : TGCCCAAAGCCAGTTTTCTCTTTTTTCTGAAGCGTAGTCAATCAAGCCTATTGCAGACCC
SKNB1_0096_C05.b : TGCCCCA*GCCAGTTTTCTCTTTTTTCTGAAGCGTAGTCAATCAAGCCTATTGCAGACCC
20110601C-007303 : ACGTTCTTGGGNTCCTGG*AGGTGCAGCCCCCACTTTCTAGTCTTCTGTGTCCCGATTCC
---------+---------+---------+---------+---------+---------+ 1290
SKNB1_0053_F12.b :
SKNB1_0016_F03.b :
ILNT1_0075_B07.b : ttcccgaaggggccacccccccttttagtttctgggtcccaattcacccccgctttaaaa
SKNB1_0044_B03.b : ACGTTCTTggttcctgaaagtgcagcccccacttctagtcttctgtgtcccggatctacg
SKNB1_0035_C09.b : ACGGTCTTTGGNTCCTGG*AGGTGCAGCCCCCAC*TTCTAGTCTTCTGTGTCCCGAT*CT
SKNB1_0096_C05.b : ACGTTCTTGGNNTCCTGGNAGGTGCAGCCCCCACTTTCTAGTCTTCCGTGTCCCGATTCC
20110601C-007303 : ACGCTCTGCTT*CAATCAGCCTTTGGGTCTCTACAGCCTGCTCTTTGGAGATGAATCCAA
---------+---------+---------+---------+---------+---------+ 1349
SKNB1_0053_F12.b :
SKNB1_0016_F03.b :
ILNT1_0075_B07.b : aacctttgggtctccaacccggctcttgaaaaaaaacaaaattttccttatcaaaccata
SKNB1_0044_B03.b : ctctgcttcaaataccctttgggctctacagctgccccttggaaatgaatcccaagtttt
SKNB1_0035_C09.b : ACGCTCTGCTT*CAATCAGCCTTTGGGTCTCTACgctgctctttggagatgatccaaggt
SKNB1_0096_C05.b : ACGCTCTGCTTTCAATCAGNCTTTGGGTCTCTACAGCCTGCTCTTTGGAGATGAATCCAA
20110601C-007303 : AGTTTTC.....................................................
---------+---------+---------+---------+---------+---------+ 1356
SKNB1_0053_F12.b :
SKNB1_0016_F03.b :
ILNT1_0075_B07.b : aaaaatttccccccggtttccggtgggggaaaccccgaaaggtgttaaaaatcttttctg
SKNB1_0044_B03.b : ccgtatcttaaccttcaacaaagttccggcccgaattctctgggcgacaaccccccaagg
SKNB1_0035_C09.b : ttcccgtactaaacatcaaaccgagttccgccctgatccatcgggctgccacctccaagg
SKNB1_0096_C05.b : AGTTTTCagtatctaaaccatcaaacggagttccggccggattcatcgggccgacaacct
20110601C-007303 : ............................................................
---------+---------+---------+---------+---------+---------+ 1356
SKNB1_0053_F12.b :
SKNB1_0016_F03.b :
ILNT1_0075_B07.b : gaaaagaagaatgaagaatagcaaaaaaanacaagcgcccggccgcgatttcccttgggt
SKNB1_0044_B03.b : gttaaa
SKNB1_0035_C09.b : gggtccataaatgccttcaaaaaaaaaaaaaaaaaaaaaaggccctgtgtcaaatgcggg
SKNB1_0096_C05.b : cccaaggggttcaataaaggctttctaaaaaaaaaaaaaaaaggcccattgtctcaaatg
20110601C-007303 : ............................................................
---------+---------+---------+---------+---------+---------+ 1356
SKNB1_0053_F12.b :
SKNB1_0016_F03.b :
ILNT1_0075_B07.b : ggtttgccccacacaaaatttggtggtgccgaccccaagtgcggagaacctttttttatg
SKNB1_0044_B03.b :
SKNB1_0035_C09.b : ccggccctaaaaatttaaaaaaactccccactcccccgacgaaaaaaagaa
SKNB1_0096_C05.b : aaggccggccccaaaaaatttaaaaaaaacccccaccccccccaccgaaaaaaagagagg
20110601C-007303 : ............................................................
---------+---------+---------+---------+---------+---------+ 1356
SKNB1_0053_F12.b :
SKNB1_0016_F03.b :
ILNT1_0075_B07.b : tagtgcttgtcta
SKNB1_0044_B03.b :
SKNB1_0035_C09.b :
SKNB1_0096_C05.b : attggttgttctgtttttgccctaagggtcaaaaacaaacctccactt