Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-007416

Sequence: [FASTA format sequence] GCACAGACTT CCTGTTTTGC CTAACCTACC TCCCTGCCCT GCTCCCAGGC TTCCAGAGCC ATCCTGGGAG AGCCCCTGGA CCTGGAAAGG GAAAGGAACA GATGGCAGTC TCAGTATCCA GGAGAATCAC CATGACCAGG CCCTTAGAAG AGGCTCTTTT TCAGCACTTC ATCCATCAGA AGCTGGAGAT TGCTTATGCC ATAAATAAGC CATTTCCCTT CTTTGAAGGA CTCCGAGACA ACAACTTCAT CACCGATACA CTATACAGGG AGTCATTGGA AGCCTGCAGA AATCTGGTCC CTGTATCCAG AGTAGTATAC AACATCCTCA CCAAACTGGA GAAGACCTTT AGCCTGTCCT TTCTGGAGAT GCTGTTTGGC CACATCAACC TTTATGAGTA CCCAAGCCTG ATGGCAGTTT TCAAGAGCTT CAAAAATGTG GTCACCTCCC ACAGAGGGTG GAGCAGAAGC GCAGCTGCCC CTCAGGAAGC CCCAGCCAGC ACAGCAGAAA GGAGCTCCGT CCGGCCCTTG CTGCCATTGC CTGCCTGCCA GGGGCCCCCA CCCAGCGGTC CGTCCTTGGT GCCCAGTGTC AGTGAGCCCG CAGCACCTGT CCAGCCCAGC ACTGAGATTC TGCCCAAGCC ACCCAGCCCT GCTGGCCTCG CCAAGACTCC CCCAGGAATC ATCCAGGAAG GAAGGCTCAC TCCAGTGTCC AGCGACAGCC TGATCCTCCA GACAGAAGAT AAAGAAGACA CCCCAGAGGT GCCCTGCACC CCCTCAGGCT CCGCACCAGC GATAAAAGAT GATTCTCCCA AACCACATGA CCCAGAGGAA CTCCAAGAGG CACCCAGGAT GCCTCCCCAC AAGAAAGGGA AGAAGAAAAA AAGATGTATC TGGGGCACCC CCAAAAGAAG ACACAGGAAA AAATGCCTCC CAAGAGAGGG AGCCTTACCT GACCATGGAA TCCAAGAGAA GCTCCNAGGG GTGGAATCAG AGACTCAGAG GGAAGATGAC TCACCCGGGA ACGCAGAGGT CATGACAACG CCCCCCAAGA CAAGTCTAAA TGGGCC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
SP110 sp110 nuclear body protein isoform d [Homo sapiens]. 272 4e-73 O

SP110 sp110 nuclear body protein isoform c [Homo sapiens]. 270 1e-72 O

SP110 sp110 nuclear body protein isoform a [Homo sapiens]. 270 1e-72 O

SP110 sp110 nuclear body protein isoform b [Homo sapiens]. 270 1e-72 O

SP140L nuclear body protein SP140-like protein [Homo sapiens]. 124 2e-28 O

SP100 nuclear autoantigen Sp-100 isoform 1 [Homo sapiens]. 119 4e-27

SP100 nuclear autoantigen Sp-100 isoform 6 [Homo sapiens]. 119 4e-27 O

SP100 nuclear autoantigen Sp-100 isoform 5 [Homo sapiens]. 119 4e-27 O

SP100 nuclear autoantigen Sp-100 isoform 4 [Homo sapiens]. 119 4e-27

SP100 nuclear autoantigen Sp-100 isoform 3 [Homo sapiens]. 119 4e-27

Locus	Definition	Score	E value	FL
SP110	sp110 nuclear body protein isoform d [Homo sapiens].	272	4e-73	O
SP110	sp110 nuclear body protein isoform c [Homo sapiens].	270	1e-72	O
SP110	sp110 nuclear body protein isoform a [Homo sapiens].	270	1e-72	O
SP110	sp110 nuclear body protein isoform b [Homo sapiens].	270	1e-72	O
SP140L	nuclear body protein SP140-like protein [Homo sapiens].	124	2e-28	O
SP100	nuclear autoantigen Sp-100 isoform 1 [Homo sapiens].	119	4e-27
SP100	nuclear autoantigen Sp-100 isoform 6 [Homo sapiens].	119	4e-27	O
SP100	nuclear autoantigen Sp-100 isoform 5 [Homo sapiens].	119	4e-27	O
SP100	nuclear autoantigen Sp-100 isoform 4 [Homo sapiens].	119	4e-27
SP100	nuclear autoantigen Sp-100 isoform 3 [Homo sapiens].	119	4e-27

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Sp110 sp110 nuclear body protein [Mus musculus]. 243 1e-64 O

LOC546061 PREDICTED: interferon-induced protein 75-like [Mus musculus]. 147 2e-35

LOC677525 PREDICTED: interferon-induced protein 75-like [Mus musculus]. 147 1e-35

A630001G21Rik hypothetical protein LOC319997 [Mus musculus]. 102 7e-22 O

LOC100041057 PREDICTED: sp110 nuclear body protein-like isoform 1 [Mus musculus]. 97.8 1e-20 O

C130026I21Rik SP140 nuclear body protein family member isoform 1 [Mus musculus]. 97.8 1e-20 O

Sp140 SP140 nuclear body protein family member [Mus musculus]. 94 2e-19 O

LOC100041057 PREDICTED: sp110 nuclear body protein-like [Mus musculus]. 93.6 2e-19 O

C130026I21Rik SP140 nuclear body protein family member isoform 2 [Mus musculus]. 93.6 2e-19 O

LOC671917 PREDICTED: component of Sp100-rs-like [Mus musculus]. 92 7e-19

Locus	Definition	Score	E value	FL
Sp110	sp110 nuclear body protein [Mus musculus].	243	1e-64	O
LOC546061	PREDICTED: interferon-induced protein 75-like [Mus musculus].	147	2e-35
LOC677525	PREDICTED: interferon-induced protein 75-like [Mus musculus].	147	1e-35
A630001G21Rik	hypothetical protein LOC319997 [Mus musculus].	102	7e-22	O
LOC100041057	PREDICTED: sp110 nuclear body protein-like isoform 1 [Mus musculus].	97.8	1e-20	O
C130026I21Rik	SP140 nuclear body protein family member isoform 1 [Mus musculus].	97.8	1e-20	O
Sp140	SP140 nuclear body protein family member [Mus musculus].	94	2e-19	O
LOC100041057	PREDICTED: sp110 nuclear body protein-like [Mus musculus].	93.6	2e-19	O
C130026I21Rik	SP140 nuclear body protein family member isoform 2 [Mus musculus].	93.6	2e-19	O
LOC671917	PREDICTED: component of Sp100-rs-like [Mus musculus].	92	7e-19

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC477402 PREDICTED: similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear dot-associated Sp100 protein) (Lysp100b) [Canis familiaris]. 122 8e-28

LOC609988 PREDICTED: similar to SP140 nuclear body protein isoform 1 [Canis familiaris]. 106 4e-23 O

		Locus	Definition	Score	E value	FL
		LOC477402	PREDICTED: similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear dot-associated Sp100 protein) (Lysp100b) [Canis familiaris].	122	8e-28
		LOC609988	PREDICTED: similar to SP140 nuclear body protein isoform 1 [Canis familiaris].	106	4e-23	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
SP110 PREDICTED: SP110 nuclear body protein [Bos taurus]. 298 4e-81 O

LOC100140338 PREDICTED: nuclear antigen Sp100-like [Bos taurus]. 119 3e-27 O

LOC100140338 PREDICTED: nuclear antigen Sp100-like [Bos taurus]. 119 3e-27 O

LOC100139208 hypothetical protein LOC100139208 [Bos taurus]. 119 5e-27 O

SP140 SP140 nuclear body protein [Bos taurus]. 103 3e-22 O

Locus	Definition	Score	E value	FL
SP110	PREDICTED: SP110 nuclear body protein [Bos taurus].	298	4e-81	O
LOC100140338	PREDICTED: nuclear antigen Sp100-like [Bos taurus].	119	3e-27	O
LOC100140338	PREDICTED: nuclear antigen Sp100-like [Bos taurus].	119	3e-27	O
LOC100139208	hypothetical protein LOC100139208 [Bos taurus].	119	5e-27	O
SP140	SP140 nuclear body protein [Bos taurus].	103	3e-22	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100519278 PREDICTED: sp110 nuclear body protein-like [Sus scrofa]. 541 e-154 O

LOC100516940 PREDICTED: nuclear autoantigen Sp-100-like [Sus scrofa]. 120 2e-27 O

LOC100516764 PREDICTED: nuclear body protein SP140-like [Sus scrofa]. 104 1e-22 O

Locus	Definition	Score	E value	FL
LOC100519278	PREDICTED: sp110 nuclear body protein-like [Sus scrofa].	541	e-154	O
LOC100516940	PREDICTED: nuclear autoantigen Sp-100-like [Sus scrofa].	120	2e-27	O
LOC100516764	PREDICTED: nuclear body protein SP140-like [Sus scrofa].	104	1e-22	O

Assembly Members: 8 TOP

Library Plate Loc. Read Name Accession Full Seq.

ADR01 0094 E03 ADR01_0094_E03.b DB789859 AK343570
BFLT1 0115 H05 BFLT1_0115_H05.b HX203018 AK400252
KDN01 0040 G02 KDN01_0040_G02.b
KDN01 0097 H11 KDN01_0097_H11.b FS678192
MLN01 0082 D04 MLN01_0082_D04.b CJ014172
OVRT1 0007 F05 OVRT1_0007_F05.b FS686979
OVRT1 0008 E08 OVRT1_0008_E08.b FS687058
THY01 0069 D10 THY01_0069_D10.b BP164057

SNPs: 3 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
412 C 2 0 0.250 W N ACG/T
T 6 0 0.750 ATG/M
674 A 6 0 0.750 W S CCA/P
G 2 0 0.250 CCG/P
753 C 5 0 0.714 W N CCA/P
T 2 0 0.286 TCA/S

Alignment: TOP

20110601C-007416 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
THY01_0069_D10.b : ccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0115_H05.b :           nnnncccgtcagcgtaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0007_F05.b :                                    nnnnnggtctcagcgtcngxxxxxx
OVRT1_0008_E08.b :                                    nnnnnggtctcagcgtcngxxxxxx
KDN01_0040_G02.b :                                                             
KDN01_0097_H11.b :                                                             
ADR01_0094_E03.b :                                                             
MLN01_0082_D04.b :                                                             


20110601C-007416 : ..........................GCACAGACTTCCTGTTTTGCCTAACCTACCTCCC
                   ---------+---------+---------+---------+---------+---------+ 34
THY01_0069_D10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxGCACAGACTTCCTGTTTTGCCTAACCTACCTCCC
BFLT1_0115_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxGCACAGACTTCCTGTTTTGCCTAACCTACCTCCC
OVRT1_0007_F05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCTACCTCCC
OVRT1_0008_E08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCTACCTCCC
KDN01_0040_G02.b :                  ttttttactgcggtgtgcactggtttttgcctaaCTACCTCCC
KDN01_0097_H11.b :                              tttttcctgcggtggctctggaactaCTCCC
ADR01_0094_E03.b :                      nnnnnnggacgtaacaxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0082_D04.b :  nnnggcttggactatgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-007416 : TGCCCTGCTCCCAGGCTTCCAGAGCCATCCTGGGAGAGCCCCTGGACCTGGAAAGGGAAA
                   ---------+---------+---------+---------+---------+---------+ 94
THY01_0069_D10.b : TGCCCTGCTCCCAGGCTTCCAGAGCCATCCTGGGAGAGCCCCTGGACCTGGAAAGGGAAA
BFLT1_0115_H05.b : TGCCCTGCTCCCAGGCTTCCAGAGCCATCCTGGGAGAGCCCCTGGACCTGGAAAGGGAAA
OVRT1_0007_F05.b : TGCCCTGCTCCCAGGCTTCCAGAGCCATCCTGGGAGAGCCCCTGGACCTGGAAAGGGAAA
OVRT1_0008_E08.b : TGCCCTGCTCCCAGGCTTCCAGAGCCATCCTGGGAGAGCCCCTGGACCTGGAAAGGGAAA
KDN01_0040_G02.b : TGCCCTGCTCCCAGGCTTCCAGAGCCATCCTGTGAGAGCCCCTGGACCTGGAAAGGGAAA
KDN01_0097_H11.b : TGCCCTGCTCCCAGGCTTC*AGAGCCATCCTGGGAGAGCCCCTGGACCTGGAAAGGGAAA
ADR01_0094_E03.b : xxxxxxxxxxxxxxxxxxxxxGAGCCATCCTGGGAGAGCCCCTGGACCTGGAAAGGGAAA
MLN01_0082_D04.b : xxxxxxxxxxxxxxxxxxxxxGAGCCATCCTGGGAGAGCCCCTGGACCTGGAAAGGGAAA


20110601C-007416 : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC
                   ---------+---------+---------+---------+---------+---------+ 154
THY01_0069_D10.b : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC
BFLT1_0115_H05.b : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC
OVRT1_0007_F05.b : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC
OVRT1_0008_E08.b : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC
KDN01_0040_G02.b : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC
KDN01_0097_H11.b : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC
ADR01_0094_E03.b : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC
MLN01_0082_D04.b : GGAACAGATGGCAGTCTCAGTATCCAGGAGAATCACCATGACCAGGCCCTTAGAAGAGGC


20110601C-007416 : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT
                   ---------+---------+---------+---------+---------+---------+ 214
THY01_0069_D10.b : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT
BFLT1_0115_H05.b : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT
OVRT1_0007_F05.b : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT
OVRT1_0008_E08.b : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT
KDN01_0040_G02.b : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT
KDN01_0097_H11.b : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT
ADR01_0094_E03.b : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT
MLN01_0082_D04.b : TCTTTTTCAGCACTTCATCCATCAGAAGCTGGAGATTGCTTATGCCATAAATAAGCCATT


20110601C-007416 : TCCCTTCTTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC
                   ---------+---------+---------+---------+---------+---------+ 274
THY01_0069_D10.b : TCCCTTCTTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC
BFLT1_0115_H05.b : TCCCTTCTTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC
OVRT1_0007_F05.b : TCCCTTCTTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC
OVRT1_0008_E08.b : TCCCTTCTTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC
KDN01_0040_G02.b : TCCCTTCGTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC
KDN01_0097_H11.b : TCCCTTCTTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC
ADR01_0094_E03.b : TCCCTTCTTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC
MLN01_0082_D04.b : TCCCTTCTTTGAAGGACTCCGAGACAACAACTTCATCACCGATACACTATACAGGGAGTC


20110601C-007416 : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA
                   ---------+---------+---------+---------+---------+---------+ 334
THY01_0069_D10.b : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA
BFLT1_0115_H05.b : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA
OVRT1_0007_F05.b : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA
OVRT1_0008_E08.b : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA
KDN01_0040_G02.b : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA
KDN01_0097_H11.b : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA
ADR01_0094_E03.b : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA
MLN01_0082_D04.b : ATTGGAAGCCTGCAGAAATCTGGTCCCTGTATCCAGAGTAGTATACAACATCCTCACCAA


20110601C-007416 : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA
                   ---------+---------+---------+---------+---------+---------+ 394
THY01_0069_D10.b : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA
BFLT1_0115_H05.b : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA
OVRT1_0007_F05.b : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA
OVRT1_0008_E08.b : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA
KDN01_0040_G02.b : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA
KDN01_0097_H11.b : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA
ADR01_0094_E03.b : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA
MLN01_0082_D04.b : ACTGGAGAAGACCTTTAGCCTGTCCTTTCTGGAGATGCTGTTTGGCCACATCAACCTTTA


20110601C-007416 : TGAGTACCCAAGCCTGATGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG
                   ---------+---------+---------+---------+---------+---------+ 454
THY01_0069_D10.b : TGAGTACCCAAGCCTGATGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG
BFLT1_0115_H05.b : TGAGTACCCAAGCCTGATGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG
OVRT1_0007_F05.b : TGAGTACCCAAGCCTGATGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG
OVRT1_0008_E08.b : TGAGTACCCAAGCCTGATGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG
KDN01_0040_G02.b : TGAGTACCCAAGCCTGACGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG
KDN01_0097_H11.b : TGAGTACCCAAGCCTGACGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG
ADR01_0094_E03.b : TGAGTACCCAAGCCTGATGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG
MLN01_0082_D04.b : TGAGTACCCAAGCCTGATGGCAGTTTTCAAGAGCTTCAAAAATGTGGTCACCTCCCACAG


20110601C-007416 : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG
                   ---------+---------+---------+---------+---------+---------+ 514
THY01_0069_D10.b : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG
BFLT1_0115_H05.b : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG
OVRT1_0007_F05.b : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG
OVRT1_0008_E08.b : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG
KDN01_0040_G02.b : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG
KDN01_0097_H11.b : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG
ADR01_0094_E03.b : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG
MLN01_0082_D04.b : AGGGTGGAGCAGAAGCGCAGCTGCCCCTCAGGAAGCCCCAGCCAGCACAGCAGAAAGGAG


20110601C-007416 : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC
                   ---------+---------+---------+---------+---------+---------+ 574
THY01_0069_D10.b : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC
BFLT1_0115_H05.b : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC
OVRT1_0007_F05.b : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC
OVRT1_0008_E08.b : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC
KDN01_0040_G02.b : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC
KDN01_0097_H11.b : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC
ADR01_0094_E03.b : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC
MLN01_0082_D04.b : CTCCGTCCGGCCCTTGCTGCCATTGCCTGCCTGCCAGGGGCCCCCACCCAGCGGTCCGTC


20110601C-007416 : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC
                   ---------+---------+---------+---------+---------+---------+ 634
THY01_0069_D10.b : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC
BFLT1_0115_H05.b : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC
OVRT1_0007_F05.b : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC
OVRT1_0008_E08.b : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC
KDN01_0040_G02.b : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC
KDN01_0097_H11.b : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC
ADR01_0094_E03.b : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC
MLN01_0082_D04.b : CTTGGTGCCCAGTGTCAGTGAGCCCGCAGCACCTGTCCAGCCCAGCACTGAGATTCTGCC


20110601C-007416 : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCAGGAATCATCCAGGAAGGAAG
                   ---------+---------+---------+---------+---------+---------+ 694
THY01_0069_D10.b : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCAGGAATCATCCAGGAAGGAAG
BFLT1_0115_H05.b : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCAGGAATCATCCAGGAAGGAAG
OVRT1_0007_F05.b : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCAGGAATCATCCAGGAAGGAAG
OVRT1_0008_E08.b : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCAGGAATCATCCAGGAAGGAAG
KDN01_0040_G02.b : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCGGGAATCATCCAGGAAGGAAG
KDN01_0097_H11.b : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCGGGAATCATCCAGGAAGGAAG
ADR01_0094_E03.b : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCAGGAATCATCCAGGAAGGAAG
MLN01_0082_D04.b : CAAGCCACCCAGCCCTGCTGGCCTCGCCAAGACTCCCCCAGGAATCATCCAGGAAGGAAG


20110601C-007416 : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCAGACAGAAGATAAAGAAGACACCCC
                   ---------+---------+---------+---------+---------+---------+ 754
THY01_0069_D10.b : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCAGACAGAAGATAAAGAAGACACCCC
BFLT1_0115_H05.b : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCNGACAGAAGAATAAGAAGACCCCCC
OVRT1_0007_F05.b : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCAGACAGAAGATAAAGAAGACACCCC
OVRT1_0008_E08.b : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCAGACAGAAGATAAAGAAGACACCCC
KDN01_0040_G02.b : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCAGACAGAAGATAAAGAAGACACCTC
KDN01_0097_H11.b : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCAGACAGAAGATAAAGAAGACACCTC
ADR01_0094_E03.b : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCAGACAGAAGATAAAGAAGACACCCC
MLN01_0082_D04.b : GCTCACTCCAGTGTCCAGCGACAGCCTGATCCTCCAGACAGAAGATAAAGAAGACACCCC


20110601C-007416 : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGATGATTCTCCCAAACC
                   ---------+---------+---------+---------+---------+---------+ 814
THY01_0069_D10.b : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGA              
BFLT1_0115_H05.b : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGATGATTTCTCCCAACC
OVRT1_0007_F05.b : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGATGATTCTCCCCAACC
OVRT1_0008_E08.b : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGATGATTCTCCCCAACC
KDN01_0040_G02.b : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGATGATTCTCCCAAACC
KDN01_0097_H11.b : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGATGATTCTCCCAAACC
ADR01_0094_E03.b : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGATGATTCTCCCAAACC
MLN01_0082_D04.b : AGAGGTGCCCTGCACCCCCTCAGGCTCCGCACCAGCGATAAAAGATGATTCTCCCAAACC


20110601C-007416 : ACATGACCCAGAGGAACTCCAAGAGGCACCCAGGATGCCTCCCCACAAGAAAGGGAAGAA
                   ---------+---------+---------+---------+---------+---------+ 874
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : ACATGACCCAGAGGAACTCCNAGAGGCACCCAAGATGCCTCCCCACAGGAAG*GGAAGAA
OVRT1_0007_F05.b : ACATGACCCAGAGGAACTCCNAGAGGCACCCAGGATGCCTCCCCAACAGAAA*GGAAGAA
OVRT1_0008_E08.b : ACATGACCCAGAGGAACTCCNAGAGGCACCCAGGATGCCTCCCAACAAGAAAGGGAAGAA
KDN01_0040_G02.b : ACATGACCCAGAGGAACTCCAAGAGGCACCCAGGATGCCTCCCAACAAGAAAGGAAAGAA
KDN01_0097_H11.b : ACATGACCCAGAGGAACTCCAAGAGGCACCCAGGATGCCTCCCCACAAGAAA*GGAAAAA
ADR01_0094_E03.b : ACATGACCCAGAGGAACTCCAAGAGGCACCCAGGATGCCTCCCCNACANGAAGGGAAGAA
MLN01_0082_D04.b : ACATGACCCAGAGGAACTCCAAGAGGCACCCAGGATGCCCTCCCAACAGAAAGGAAAGAA


20110601C-007416 : GAAAAAAAGATGTATCTGGGGCACCCCCAAAAGAAGACACAGGAAAAAATGCCTCCCAAG
                   ---------+---------+---------+---------+---------+---------+ 934
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : GAANNAAAGATGTATCTGGGGCACCCCCAAAAGAAGACACAGAAAAAAtgcctccnagag
OVRT1_0007_F05.b : GAAAAAAAGATGTATCTGGGNCACCCCCAAAAGAAGACACAGGAAAAAtgcctcccagag
OVRT1_0008_E08.b : GAAAAAAAGATGTATCTGGGGCACCCCCAAAAGAAGACACAAGAAAAAATGCCCTCCCAG
KDN01_0040_G02.b : GAAAAAAAGATGTATCTGGGCAACCCCCAAAAGAAGACACAGGAAAAAATGCCTCCCAAG
KDN01_0097_H11.b : AAAAAAAaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0094_E03.b : GAAAAAAAGATGTATCTGGGGCACCCCCAAAAGAAGACACAGGAAAAAtgcctcccnaga
MLN01_0082_D04.b : GAAAA*AAGATGTATCTGGGGCAACCCCCAAAGAAGACACAAGAAAAATGgcctcccaga


20110601C-007416 : AGAGGGAGCCTTACCTGACCATGGAATCCAAGAGAAGCTCCNAGGGGTGGAATCAGAGAC
                   ---------+---------+---------+---------+---------+---------+ 994
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : agggagccttactgacntggnatccaagaaagctccaggggtggataggaaatcaaagga
OVRT1_0007_F05.b : agggagcctttacctgacatggaatccaagagagctccaggggtgatcaggaaatcagaa
OVRT1_0008_E08.b : AGagggagcctttactgaccatggnatccaagaaaagctcaaggggtggatcgggaaact
KDN01_0040_G02.b : AGAGGGAGCCTTACCTGACCATGGAATCCAAGAGAAGCTCCNAGGGGTGGAATCAGAGAC
KDN01_0097_H11.b : xxxxxxxxxxxxxnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ADR01_0094_E03.b : gagggnagcnntactgaccatggaatccnagagaagctccaaggggtggatcaggagact
MLN01_0082_D04.b : gagggagccntacctgaccatggaatccagagaagctccaggggtgggatcagagactcn


20110601C-007416 : TCAGAGGGAAGATGACTCACCCGGGAACGCAGAGGTCATGACAACGCCCCCCAAGACAAG
                   ---------+---------+---------+---------+---------+---------+ 1054
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : agatacctcaccggaacccgagtcctgaaacggccccaaacaaacctaatttgccaaact
OVRT1_0007_F05.b : gaagatgactcacccggaacgcaaggtctgacaccgccccaagaacaacctaatgttgcg
OVRT1_0008_E08.b : cgaaggaagatgactcaccgggaacgcaaagtcatgacacggccccaaaaacaaacctaa
KDN01_0040_G02.b : TCAGAGGGAAGATGACTCACCCGGGAACGCAGAGGTCATGACAACGCCCCCCAAGACAAG
KDN01_0097_H11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ADR01_0094_E03.b : cagaagaagggatgactcaccgggaacgcaaaagtcatgaccacgccccccagacaaagc
MLN01_0082_D04.b : gaggaggatgactcaccgggaacgcagaggtcatgacaacggcccccagacaaagccaaa


20110601C-007416 : TCTAAATGGGCC................................................
                   ---------+---------+---------+---------+---------+---------+ 1066
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : gaaaccaaggaaccctgtgatttccaaagtgttaaaaaaaacccggacccccccggccaa
OVRT1_0007_F05.b : aaccctgaacgaagaaacccgatgactttcgaaatggtgagaaaaaaacccggagcccca
OVRT1_0008_E08.b : tgggcccaacctgaaaccgagaaaacccgatgacttcccgaggggtgaaaaaaggacccg
KDN01_0040_G02.b : TCTAAATGGGCCcgaccctgaaacagaggagaccctgatgaacttccaaagtggtgaaaa
KDN01_0097_H11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ADR01_0094_E03.b : ctaatgtgcccgacactgnaaccgaagagacactgatgacttccnagagtggttgagaaa
MLN01_0082_D04.b : atgtgcccgaacctgaacccgagggaaccacgatgactttccgaaatgggtggaaaaaaa


20110601C-007416 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1066
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : aaacccaaaaggaagaaaaaatatttctccattctaaaaaaaaagccttttcactggtgg
OVRT1_0007_F05.b : ccggccaaaaaccgggatagggaggaaaaacttttgctgccattcaaaaaaaaaaaagcc
OVRT1_0008_E08.b : gaaccaccggcggccaaaaaaccggaaaaagaagagaaaacttttcctgctaattccaaa
KDN01_0040_G02.b : aaaaaaccccgggaccaccagcaggccaaaagaccgggaataagaaaacctaagaaaaaa
KDN01_0097_H11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ADR01_0094_E03.b : agagaccaggagccatcagcaggccaacagaccgcaattaggaaaggaagaaccttttag
MLN01_0082_D04.b : aaccccgggaccacccggcggccaaagaacgcgaataaggaaacctaaaacaaactcgga


20110601C-007416 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1066
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : cgcccaaaattaaaaacccccccccacaaaaaaaagatgttttttttttttatgttaaaa
OVRT1_0007_F05.b : ctggtctcacttggcgggctaaattataaaaaaccccccccccggacgaaaaaagaggct
OVRT1_0008_E08.b : aaaaaaaagccattggctcattgggggcggccctaaaattaaaaaaacccccacctcccg
KDN01_0040_G02.b : tcgggatttccccctcccaaactcggggaccggggggagcaaaggattttgttaggggaa
KDN01_0097_H11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ADR01_0094_E03.b : ctgctcagttcaaaaaagacgaaaaatgtcccccagaaaacctaagaaaaccgggatttc
MLN01_0082_D04.b : ttccacccccaacttcgggacctggggaaccaaaggtatttgtaagggaaaaggaacgga


20110601C-007416 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1066
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : aaaacatcaaaattttcttgtttgccaatttaggggggaaatcctccccccccccgggcn
OVRT1_0007_F05.b : ttgtttatttttcgctttgggtacaaaaaacccattccaaaattctccgtctgggtggaa
OVRT1_0008_E08.b : aacagaaaaaaaagattggtttaatttttgtcttaggtcaaaacgacccaattcaaaatt
KDN01_0040_G02.b : aagaaccgggactctcaaaaggcttcaaagagggggcgtttggtccccccggaaattgaa
KDN01_0097_H11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ADR01_0094_E03.b : cccccaaactccgggccgggggaaacaaaggtttttatagggaaagaactggtcctcaaa
MLN01_0082_D04.b : atctcaaaaggcctccaaggggggggttggttccccggaattgtaattgggaaaccaaca


20110601C-007416 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1066
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : ngnnnnnnnnnnnnnnnnngggggggggnnnaaaccgctcttcatccctcctcaccnnnn
OVRT1_0007_F05.b : aaagtttttggcgcggagaaatttcccctcaaaccgccgcgggggcccggggtctttnna
OVRT1_0008_E08.b : ttttgcctttggggcaaccagtataatggggcgggagaaatattcctcctccaaccggcg
KDN01_0040_G02.b : ttggggaaacaaaccaaaatttgtgagcgagggtttgggggaaaccttacacttaaaaag
KDN01_0097_H11.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ADR01_0094_E03.b : aggtcccaatagggggggtttggtccccggaattttattggggaacacacaaa      
MLN01_0082_D04.b : aaagttggagggg                                              


20110601C-007416 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1066
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b : nt                                                         
OVRT1_0007_F05.b : aaaaaaaccgaanttttttttnnaagtattttttctcttgggtgactcggnnnc     
OVRT1_0008_E08.b : ggggggggcccggggtttatgagaaagaagaa                           
KDN01_0040_G02.b : agttttgttcccccagaatctcaagaccatatccggtggggtgtgggggggtgttctcgg
KDN01_0097_H11.b : nnnnnnnnnnnnnnnnnnnnnn                                     
ADR01_0094_E03.b :                                                             
MLN01_0082_D04.b :                                                             


20110601C-007416 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1066
THY01_0069_D10.b :                                                             
BFLT1_0115_H05.b :                                                             
OVRT1_0007_F05.b :                                                             
OVRT1_0008_E08.b :                                                             
KDN01_0040_G02.b : tacttgaggcttaaaaactccccgggaaga                             
KDN01_0097_H11.b :                                                             
ADR01_0094_E03.b :                                                             
MLN01_0082_D04.b :