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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-007527

Length: 1,000

Sequence:  [FASTA format sequence]
GCCCACTGGG AGGGCCTGGC CCCTGGGAGG GTGTGGGTGC CAACGGCTGA GACTGGGTAT
AAGGCACCAC CATCCCAGCT GCCCCCGGCT GTTCCCATCA TGCCAGCACT CAGATTCCTG
GCCCTGCTGG CCAGCCTGCT GGCAACCTCC AGGGTTGGCT TGGCCACCCT GGCAGACATT
GTGGGCGGCA GGAGGGCCCA GCCGCAGGAG TTCCCGTTTC TGGCCTCCAT TCAGAAACAA
GGGAGGCCCT TTTGCGCCGG AGCCCTGGTC CATCCCCGCT TCGTCCTGAC AGCGGCCAGC
TGCTTCCGTG GCAAGAACAG CGGAAGTGCC TCTGTGGTGC TGGGGGCCTA TGACCTGAGG
CAGCAGGAGC AGTCCCGGCA GACATTCTCC ATCAGGAGCA TCAGCCAGAA CGGCTATGAC
CCCCGGCAGA ATCTGAACGA TGTGCTGCTG CTGCAGCTGG ACCGTGAGGC CAGACTCACC
CCCAGTGTGG CCCTGGTACC GCTGCCCCCG CAGAATGCCA CAGTGGAAGC TGGCACCAAC
TGCCAAGTTG CGGGCTGGGG GACCCAGCGG CTTAGGAGGC TTTTCTCCCG CTTCCCAAGG
GTGCTCAATG TCACCGTGAC CTCAAACCCG TGTCTCCCCA GAGACATGTG CATTGGTGTC
ATCAGCCGCC GGGGCCGCAT CAGCCAGGGA GACAGAGGCA CCCCCCTCGT CTGCAACGGC
CTGGCGCAGG GCGTGGCCTC CTTCCTCCGG AGGCGTTTCC GCAGGAGCTC CGGCTTCTTC
ACCCGCGTGG CGCTCTTCAG AAATTGGATT GATTCAGTTC TCAACAACCC GCCGGCCTGA
AGGATCCCCT CGCCGAGCCC GTGGGAAGGG GGGCCTGTTA GCCCCCTGGA GCCCTGCCCC
CACTGCCACA CCTCCCGCGC TGCGTGTCCC ATCCCAAAGC CCCATCCTGG ACCGCTCTGT
CGAGGCTGTA ATAAAGAAGC TGTTACCATT CAAAAAAAAA

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		AZU1	azurocidin preproprotein [Homo sapiens].	267	1e-71	O
		ELANE	neutrophil elastase preproprotein [Homo sapiens].	150	1e-36	O
		PRTN3	myeloblastin [Homo sapiens].	146	3e-35	O
		CFD	complement factor D preproprotein [Homo sapiens].	95.5	7e-20	O
		GZMH	granzyme H precursor [Homo sapiens].	95.1	9e-20	O
		GZMA	granzyme A precursor [Homo sapiens].	94.4	1e-19	O
		GZMB	granzyme B precursor [Homo sapiens].	89.7	4e-18	O
		CTSG	cathepsin G preproprotein [Homo sapiens].	89.4	5e-18	O
		GZMK	granzyme K precursor [Homo sapiens].	88.6	8e-18	O
		GZMM	granzyme M precursor [Homo sapiens].	87.8	1e-17	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Elane	neutrophil elastase precursor [Mus musculus].	149	3e-36	O
		Prtn3	myeloblastin precursor [Mus musculus].	134	1e-31	O
		Gzmk	granzyme K precursor [Mus musculus].	100	2e-21	O
		Prss57	serine protease 57 precursor [Mus musculus].	95.1	7e-20	O
		Ctsg	cathepsin G preproprotein [Mus musculus].	92.4	5e-19	O
		Cma2	mast cell protease 10 [Mus musculus].	89.7	3e-18	O
		Gzmd	granzyme D [Mus musculus].	87.8	1e-17	O
		Mcpt1	mast cell protease 1 precursor [Mus musculus].	87	2e-17	O
		Cfd	complement factor D precursor [Mus musculus].	86.7	3e-17	O
		Mcpt9	mast cell protease 9 precursor [Mus musculus].	86.7	3e-17	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		ELANE	neutrophil elastase [Canis lupus familiaris].	161	1e-39	O
		LOC608543	PREDICTED: similar to Cathepsin G precursor (CG) [Canis familiaris].	107	2e-23	O
		LOC490629	PREDICTED: similar to Granzyme H precursor (Cytotoxic T-lymphocyte proteinase) (Cathepsin G-like 2) (CTSGL2) (CCP-X) (Cytotoxic serine protease-C) (CSP-C) [Canis familiaris].	101	1e-21	O
		LOC490630	PREDICTED: similar to Granzyme B precursor (T-cell serine protease 1-3E) (Cytotoxic T-lymphocyte proteinase 2) (Lymphocyte protease) (SECT) (Granzyme-2) (Cathepsin G-like 1) (CTSGL1) (CTLA-1) (Human lymphocyte protein) (HLP) (C11) [Canis familiaris].	99.8	4e-21
		LOC487207	PREDICTED: similar to Granzyme A precursor (Cytotoxic T-lymphocyte proteinase 1) (Hanukkah factor) (H factor) (HF) (Granzyme-1) (CTL tryptase) [Canis familiaris].	93.6	3e-19	O
		LOC489200	PREDICTED: similar to Granzyme K precursor (Granzyme-3) (NK-tryptase-2) (NK-TRYP-2) [Canis familiaris].	91.3	1e-18	O
		LOC485099	PREDICTED: similar to protease, serine-like 1 [Canis familiaris].	90.1	1e-18
		LOC485095	PREDICTED: similar to Complement factor D precursor (C3 convertase activator) (Properdin factor D) (Adipsin) [Canis familiaris].	86.7	3e-17	O
		LOC484349	PREDICTED: similar to kallikrein 13 precursor [Canis familiaris].	79.7	4e-15	O
		CMA1	chymase precursor [Canis lupus familiaris].	79	7e-15	O

BLAST on RefSeq (Cattle):      TOP