Please validate JavaScript on your browser
[Help]
[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name:
20110601C-007731
Length:
976
Sequence :
[FASTA format sequence] TCTCGCTCGC GGCGTGGAGT CCACACGAGC TCCGGAGGAG CTCGATTGTG CAGAAGGATG AGTGCAGGCT CGGACCCCGT GGTCATCGTC TCGGCGGCGC GGACCGTCAT AGGCTCCTTC AATGGTGCTT TGTCCACCGT TCCTGTCCAT GACCTGGGCT CGACTGTCAT CAGAGAGGTC CTGAAGAGGG CCAATGTGGA TCCCAAGGAG GTATCAGAGG TCATATTTGG ACACGTTTTG ACAGCAGGTT GTGGGCAGAA TCCCGTTCGA CAAGCCAGTG TGGGGGCAGG AATCCCCTAC TCTGTTCCGG CCTGGAGCTG CCAGATGATC TGTGGGTCAG GCCTGAAGGC CGTGTGCCTC GCTGCCCAGG CCATAGGGGT GGGAGACTCC CGCATTGTGG TCGCAGGAGG CATGGAAAAC ATGAGCAAGG CCCCTCACTT GGTTCACCTG AGGACCGGCG TCAGGCTCGG GGAGGCCGCG CTCACTGACA GCATCCTCTG TGATGGGCTG ACAGATGCGT TTCACAACTA CCACATGGGC ATCACAGCTG AAAACGTAGC CAAAAAATGG CAAGTGAGTA GAGAAGATCA GGACAGGCTT GCCGCTCTGT CCCAGGACAG GACGGAGAAG GCACAGAAAG CTGGCCATTT TGACAAAGAG ATTGTGCCGG TTTTTGTATC TTCTAGAAAA GGTGTCACCG AAGTGAAAAC CGATGAGTTT CCTCGCCCCG GGAGCACCCT AGAAGCCATG TCTAAGCTAA AGCCTTACTT TCTCACAGAT GGGACAGGAA CAGTCACCCC AGCTAATGCC TCAGGAATTA ATGATGGTGC TGCTGCTGTG GTTCTTATGA AGAAGTCGGA GGCTGAGAAC CGCGGGCTTA CTCCTTTAGC ACACATAGTT TCCTGGTCAC AAGCAAGCGT GGAGCCTTCC ATCATGGGAA CAGGCCCAAT CCCGGCAATA AAGCAAGCTG TTGCAA
SNP mapping information
SNP ID Rel. Chr. Location (cM)
Assembly Overview : TOP
Change score limit to
BLAST on RefSeq (Human) : TOP
Locus Definition Score E value FL
ACAT2 acetyl-CoA acetyltransferase, cytosolic [Homo sapiens]. 532 e-151 O
ACAT1 acetyl-CoA acetyltransferase, mitochondrial precursor [Homo sapiens]. 219 3e-57
ACAA2 3-ketoacyl-CoA thiolase, mitochondrial [Homo sapiens]. 201 6e-52 O
ACAA1 3-ketoacyl-CoA thiolase, peroxisomal isoform a [Homo sapiens]. 155 7e-38
HADHB trifunctional enzyme subunit beta, mitochondrial precursor [Homo sapiens]. 111 1e-24
ACAA1 3-ketoacyl-CoA thiolase, peroxisomal isoform b [Homo sapiens]. 100 3e-21
BLAST on RefSeq (Mouse) : TOP
Locus Definition Score E value FL
Acat2 acetyl-CoA acetyltransferase, cytosolic [Mus musculus]. 529 e-150 O
Acat3 acetyl-Coenzyme A acetyltransferase 3 [Mus musculus]. 520 e-148 O
Acat1 acetyl-CoA acetyltransferase, mitochondrial precursor [Mus musculus]. 216 3e-56
Acaa2 3-ketoacyl-CoA thiolase, mitochondrial [Mus musculus]. 200 1e-51 O
Acaa1b 3-ketoacyl-CoA thiolase B, peroxisomal precursor [Mus musculus]. 156 2e-38
Acaa1a 3-ketoacyl-CoA thiolase A, peroxisomal precursor [Mus musculus]. 153 2e-37
Hadhb trifunctional enzyme subunit beta, mitochondrial precursor [Mus musculus]. 118 6e-27
LOC100504946 PREDICTED: trifunctional enzyme subunit beta, mitochondrial-like [Mus musculus]. 80.9 1e-15 O
BLAST on RefSeq (Dog) : TOP
Locus Definition Score E value FL
LOC484063 PREDICTED: similar to Acetyl-CoA acetyltransferase, cytosolic (Cytosolic acetoacetyl-CoA thiolase) (Acetyl CoA transferase-like protein) [Canis familiaris]. 539 e-153 O
LOC489421 PREDICTED: similar to Acetyl-CoA acetyltransferase, mitochondrial precursor (Acetoacetyl-CoA thiolase) (T2) [Canis familiaris]. 224 7e-59
LOC477023 PREDICTED: similar to 3-ketoacyl-CoA thiolase, peroxisomal precursor (Beta-ketothiolase) (Acetyl-CoA acyltransferase) (Peroxisomal 3-oxoacyl-CoA thiolase) isoform 1 [Canis familiaris]. 153 3e-37
LOC490568 PREDICTED: similar to acetyl-coenzyme A acyltransferase 2 [Canis familiaris]. 116 3e-26 O
LOC607926 PREDICTED: similar to Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta) isoform 3 [Canis familiaris]. 114 2e-25
LOC607926 PREDICTED: similar to Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta) isoform 2 [Canis familiaris]. 114 2e-25
LOC607926 PREDICTED: similar to Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta) isoform 1 [Canis familiaris]. 114 2e-25
LOC481043 PREDICTED: similar to hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit isoform 3 [Canis familiaris]. 109 3e-24
LOC481043 PREDICTED: similar to hydroxyacyl dehydrogenase, subunit B isoform 1 [Canis familiaris]. 109 3e-24
LOC481043 PREDICTED: similar to hydroxyacyl dehydrogenase, subunit B isoform 4 [Canis familiaris]. 109 3e-24 O
BLAST on RefSeq (Cattle) : TOP
Locus Definition Score E value FL
ACAT2 acetyl-CoA acetyltransferase, cytosolic [Bos taurus]. 540 e-153 O
ACAT1 acetyl-CoA acetyltransferase, mitochondrial precursor [Bos taurus]. 218 6e-57
ACAA2 3-ketoacyl-CoA thiolase, mitochondrial [Bos taurus]. 215 4e-56 O
ACAA1 3-ketoacyl-CoA thiolase, peroxisomal [Bos taurus]. 159 5e-39
HADHB trifunctional enzyme subunit beta, mitochondrial precursor [Bos taurus]. 114 1e-25
BLAST on RefSeq (Pig) : TOP
Locus Definition Score E value FL
LOC100152303 PREDICTED: acetyl-CoA acetyltransferase, cytosolic [Sus scrofa]. 599 e-172 O
ACAT1 PREDICTED: acetyl-CoA acetyltransferase, mitochondrial [Sus scrofa]. 217 9e-57
ACAA2 3-ketoacyl-CoA thiolase, mitochondrial [Sus scrofa]. 211 6e-55 O
ACAA1 PREDICTED: 3-ketoacyl-CoA thiolase A, peroxisomal isoform 1 [Sus scrofa]. 151 6e-37
LOC100517370 PREDICTED: 3-ketoacyl-CoA thiolase, peroxisomal-like [Sus scrofa]. 142 3e-34
LCTHIO long-chain 3-ketoacyl-CoA thiolase [Sus scrofa]. 107 8e-24 O
ACAA1 PREDICTED: 3-ketoacyl-CoA thiolase A, peroxisomal isoform 2 [Sus scrofa]. 100 2e-21
Assembly Members : 12 TOP
SNPs : 4 TOP
Loc. Allele Individuals Freq. Type AA Change Western Meishan 33 C 1 4 0.556 O S TCC/S G 1 3 0.444 TCG/S 363 C 2 0 0.182 W S GCC/A T 1 8 0.818 GCT/A 446 A 1 7 0.800 W N CAC/H G 2 0 0.200 CGC/R 478 A 1 2 0.333 O N ACG/T G 2 4 0.667 GCG/A
Alignment : TOP
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 0LVRM1_0073_A08.b : cgttgacxxxxxxxxxxxxxxxxxxxxxxxxUTR01_0055_D02.b : agcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxOVRM1_0217_B02.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxOVRM1_0071_D01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLVRM1_0123_H09.b : nagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxOVRM1_0074_C06.b : atxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLVRM1_0115_G06.b : cagtgtxxxxxxxxxxxxxxxxxxxxxxxxxxLVRM1_0102_G02.b : cagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxOVRM1_0023_A10.b : nagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxPST01_0026_E06.b : OVRM1_0137_D06.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxSKNB1_0020_F01.b : nnnngg
20110601C-007731 : ..........................TCTCGCTCGCGGCGTGGAGTCCACACGAGCTCC G ---------+---------+---------+---------+---------+---------+ 34LVRM1_0073_A08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxTCTCGCTCGCGGCGTGGAGTCCACACCAGCTCG GUTR01_0055_D02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxTCTCGCTCGCGGCGTGGAGTCCACACGAGCTCC GOVRM1_0217_B02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGCTCGCGGCGTGGAGTCCACACCAGCTCG GOVRM1_0071_D01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGCTCGCGGCGTGGAGTCCACACGAGCTCC GLVRM1_0123_H09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGCTCGCGGCGTGGAGTCCACACGAGCTCC GOVRM1_0074_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGCTCGCGGCGTGGAGTCCACACCAGCTCG GLVRM1_0115_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGCTCGCGGCGTGGAGTCCACACGAGCTCC GLVRM1_0102_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGCTCGCGGCGTGGAGTCCACACGAGCTCC GOVRM1_0023_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGCTCGCGGCGTGGAGTCCACACGAGCTCC GPST01_0026_E06.b : ttttcctgcggtggctatggcCTCGCTCGCGGCGTGGAGTCC*CACCAGCTCG GOVRM1_0137_D06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGCGGCGTGGAGTCCACACGAGCTCC GSKNB1_0020_F01.b : ggattnnnnnngatacgttggctatgggatcgctGCGGCGTGGAGTC*ACACCAGCTCG G
20110601C-007731 : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGG ---------+---------+---------+---------+---------+---------+ 94LVRM1_0073_A08.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGUTR01_0055_D02.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGOVRM1_0217_B02.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGOVRM1_0071_D01.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGLVRM1_0123_H09.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGOVRM1_0074_C06.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGLVRM1_0115_G06.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGLVRM1_0102_G02.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGOVRM1_0023_A10.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGPST01_0026_E06.b : GAGGAGCTCGATTGTGCATAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGOVRM1_0137_D06.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGGSKNB1_0020_F01.b : GAGGAGCTCGATTGTGCAGAAGGATGAGTGCAGGCTCGGACCCCGTGGTCATCGTCTCGG
20110601C-007731 : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACC ---------+---------+---------+---------+---------+---------+ 154LVRM1_0073_A08.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCUTR01_0055_D02.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCOVRM1_0217_B02.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCOVRM1_0071_D01.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCLVRM1_0123_H09.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCOVRM1_0074_C06.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCLVRM1_0115_G06.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCLVRM1_0102_G02.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCOVRM1_0023_A10.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCPST01_0026_E06.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCOVRM1_0137_D06.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACCSKNB1_0020_F01.b : CGGCGCGGACCGTCATAGGCTCCTTCAATGGTGCTTTGTCCACCGTTCCTGTCCATGACC
20110601C-007731 : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTAT ---------+---------+---------+---------+---------+---------+ 214LVRM1_0073_A08.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATUTR01_0055_D02.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATOVRM1_0217_B02.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATOVRM1_0071_D01.b : TGGGCTCGACTGTCATCATAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATLVRM1_0123_H09.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATOVRM1_0074_C06.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATLVRM1_0115_G06.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATLVRM1_0102_G02.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATOVRM1_0023_A10.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATPST01_0026_E06.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATOVRM1_0137_D06.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTATSKNB1_0020_F01.b : TGGGCTCGACTGTCATCAGAGAGGTCCTGAAGAGGGCCAATGTGGATCCCAAGGAGGTAT
20110601C-007731 : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAG ---------+---------+---------+---------+---------+---------+ 274LVRM1_0073_A08.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGUTR01_0055_D02.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGOVRM1_0217_B02.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGOVRM1_0071_D01.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAGTCCCGTTCGACAAGLVRM1_0123_H09.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGOVRM1_0074_C06.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGLVRM1_0115_G06.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGLVRM1_0102_G02.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGOVRM1_0023_A10.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGPST01_0026_E06.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGOVRM1_0137_D06.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAGSKNB1_0020_F01.b : CAGAGGTCATATTTGGACACGTTTTGACAGCAGGTTGTGGGCAGAATCCCGTTCGACAAG
20110601C-007731 : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTG ---------+---------+---------+---------+---------+---------+ 334LVRM1_0073_A08.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGUTR01_0055_D02.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGOVRM1_0217_B02.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGOVRM1_0071_D01.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGLVRM1_0123_H09.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGOVRM1_0074_C06.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGLVRM1_0115_G06.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGLVRM1_0102_G02.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGOVRM1_0023_A10.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGPST01_0026_E06.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGOVRM1_0137_D06.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTGSKNB1_0020_F01.b : CCAGTGTGGGGGCAGGAATCCCCTACTCTGTTCCGGCCTGGAGCTGCCAGATGATCTGTG
20110601C-007731 : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCA ---------+---------+---------+---------+---------+---------+ 394LVRM1_0073_A08.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCAUTR01_0055_D02.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCAOVRM1_0217_B02.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCAOVRM1_0071_D01.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCALVRM1_0123_H09.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCAOVRM1_0074_C06.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCALVRM1_0115_G06.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCALVRM1_0102_G02.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCAOVRM1_0023_A10.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCAGGCCATAGGGGTGGGAGACTCCCGCAPST01_0026_E06.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCC GCCCAGGCCATAGGGGTGGGAGACTCCCGCAOVRM1_0137_D06.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCT GCCCANGCCATAGGGGTGGGAGACTCCCGCASKNB1_0020_F01.b : GGTCAGGCCTGAAGGCCGTGTGCCTCGCC GCCCAGGCCATAGGGGTGGGAGACTCCCGCA
20110601C-007731 : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGA ---------+---------+---------+---------+---------+---------+ 454LVRM1_0073_A08.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGAUTR01_0055_D02.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGAOVRM1_0217_B02.b : TTGTGGTCGCAGGAAGCATGGAAAACATGACCCAGGCCCCTCACTTGGTTCA CCTGAGGAOVRM1_0071_D01.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGALVRM1_0123_H09.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGAOVRM1_0074_C06.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGALVRM1_0115_G06.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGALVRM1_0102_G02.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGAOVRM1_0023_A10.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCA CCTGAGGAPST01_0026_E06.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCG CCTGAGGAOVRM1_0137_D06.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGGCCCTCACTTGGTTCA CCTGAAGASKNB1_0020_F01.b : TTGTGGTCGCAGGAGGCATGGAAAACATGAGCAAGGCCCCTCACTTGGTTCG CCTGAGGA
20110601C-007731 : CCGGCGTCAGGCTCGGGGAGGCCG CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAG ---------+---------+---------+---------+---------+---------+ 514LVRM1_0073_A08.b : CCGGCGTCAGGCTCGGGGAGGCCA CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGUTR01_0055_D02.b : CCGGCGTCAGGCTCGGGGAGGCCA CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGOVRM1_0217_B02.b : CCGGCGTCAGGCTCGGGGAGGCCA CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAAOVRM1_0071_D01.b : CCGGCGTCAGGCTCGGGGAGGCCG CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGLVRM1_0123_H09.b : CCGGCGTCAGGCTCGGGGAGGCCG CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGOVRM1_0074_C06.b : CCGGCGTCAGGCTCGGGGAGGCCA CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGLVRM1_0115_G06.b : CCGGCGTCAGGCTCGGGGAGGCCG CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGLVRM1_0102_G02.b : CCGGCGTCAGGCTCGGGGAGGCCG CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGOVRM1_0023_A10.b : CCGGCGTCAGGCTCGGGGAGGCCG CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGPST01_0026_E06.b : CCGGCGTCAGGCTCGGGGAGGCCG CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAGOVRM1_0137_D06.b : CCGGCGTCAAGCTCCGGGAGGCCG CGCTCACTGACAACATCCTCTGTGATGGGCTGACANSKNB1_0020_F01.b : CCGGCGTCAGGCTCGGGGAGGCCG CGCTCACTGACAGCATCCTCTGTGATGGGCTGACAG
20110601C-007731 : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCAAAAAATGGCAAG ---------+---------+---------+---------+---------+---------+ 574LVRM1_0073_A08.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCNAAAAATGGCAAGUTR01_0055_D02.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCAAAAAATGGCAAGOVRM1_0217_B02.b : ATGCCTTTCACAACTACCtcaggggctgctagcctggaaaccttatcaaaaaaatggccgOVRM1_0071_D01.b : ATGCGTTTCACACCTACCACATGGGCATCACAGCTGAAAACGTATCCTAAAAATGGCTAGLVRM1_0123_H09.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCCAAAAATGGCAAGOVRM1_0074_C06.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCAAAAAATGGCAAGLVRM1_0115_G06.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCAAAAAATGGCAAGLVRM1_0102_G02.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCAAAAAATGGCAAGOVRM1_0023_A10.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCAAAAAATGGCAAGPST01_0026_E06.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCAAAAAATGGCAAGOVRM1_0137_D06.b : ATGCGTTTCACAACTACCACCTGGGCATTACAACTGTAAACCGTACCCAAAAATGGCAAGSKNB1_0020_F01.b : ATGCGTTTCACAACTACCACATGGGCATCACAGCTGAAAACGTAGCCAAAAAATGGCAAG
20110601C-007731 : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCA ---------+---------+---------+---------+---------+---------+ 633LVRM1_0073_A08.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCAUTR01_0055_D02.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCAOVRM1_0217_B02.b : gtcgactagagaagaacatgacgagcttgctggtctggcctagcacaggatgtagaaaggOVRM1_0071_D01.b : TTGAGTAAAGAAGATCAGGACAGGCTTGCCGCTCTGTCTCAGGACAGGACCGAGAAAGCCLVRM1_0123_H09.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCANGACAGGACGGAGAAAGCAOVRM1_0074_C06.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCALVRM1_0115_G06.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCALVRM1_0102_G02.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCAOVRM1_0023_A10.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCAPST01_0026_E06.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCAOVRM1_0137_D06.b : T*GAGTAcacgagatctagtacaggttgcctgtctgttcctagacaggaagtgaaaaagcSKNB1_0020_F01.b : T*GAGTAGAGAAGATCAGGACAGGCTTGCCGCTCTGTCCCAGGACAGGACGGAGAAGGCA
20110601C-007731 : CAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCGGTTTTTGTATCTTCTAGAAAAGGT ---------+---------+---------+---------+---------+---------+ 693LVRM1_0073_A08.b : CAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCGGTTTTTGTATCTTCTAGAACAGGTUTR01_0055_D02.b : CAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCGGTTTTTGTATCTTCTAGAAAAGGTOVRM1_0217_B02.b : taacaatgctggcgtatttgacgagaaatgcgacccgactttcgatactcggaagcatacOVRM1_0071_D01.b : CAGATAGCTGGCCATTTTGACATAGAaatgcgccgcattttgtatcttctagaaacgggtLVRM1_0123_H09.b : CAGAAAGCTGGCCATTTTGACTAAGAGATTGTGCCGGTTTTTGTATCTTCTAGAAAAG*TOVRM1_0074_C06.b : CAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCGGTTTTTGTATCTTCTAGAAAAGGTLVRM1_0115_G06.b : CAGAAGGCTGGCCATTTTGACNAAAAGATTGTGCCGGTTTTTGTATCTTCTAGAANAGGTLVRM1_0102_G02.b : CAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCGGTTTTTGTATCTTCTAGAAAAGGTOVRM1_0023_A10.b : CAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCGGTTTTTGTATCTTCTAGGAAAAGTPST01_0026_E06.b : CAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCGGTTTTTGTATCTTCTAGAAAAGGTOVRM1_0137_D06.b : ccaaaaagcttgtctttttgacacacaagatgtgtgcgttttttgtatcttcctaaaaagSKNB1_0020_F01.b : CAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCGGTTTTTGTATCTTCTAGAAAAGGT
20110601C-007731 : GTCACCGAAGTGAAAACCGATGAGTTTCCTCGCCCCGGGAGCACCCTAGAAGCCATGTCT ---------+---------+---------+---------+---------+---------+ 753LVRM1_0073_A08.b : GTCACCGAAGTGAAAACCGATGAGTTTCCTCGCCCCGGGAGCACCCTAGAAGCCATGT UTR01_0055_D02.b : GTCACCGAAGTGAAAACCGATGAGTTTCCTCGCCCCGGGAGCACCCTAGAAGCCATGTCTOVRM1_0217_B02.b : ttcattaacgtgcggagccttgcctatcccgtccgcgactcagctaacagcgatttttgaOVRM1_0071_D01.b : ccccaaagtgaatccgatgaatttcctcaccccaggagcaccttaaagctatgcttaaacLVRM1_0123_H09.b : GTCACCCAAATGAAAACCCATGAGTTTCCTCCCCCCGGagacacccttaaac OVRM1_0074_C06.b : GTCACCGAAGTGAAAACCGATGAGTTTCCTCGCCCCGG LVRM1_0115_G06.b : GTCACCGAAGTGGGAACCGATGAGTTTCCTCGCCC*GGGAGCACCCTAGA LVRM1_0102_G02.b : GTCACCGAAGTGAAAACCGATGAGTTTCCTCGCCCCGGGAGCACCCTAGAAGCCATGTCTOVRM1_0023_A10.b : GTCACCGAAGTGAAAACCGATGAGTTTCCTCGCCCCGGGAGCACCCTAGAAGCCATGTCNPST01_0026_E06.b : GTCACCGAAGTGAAAACCGATGAGTTTCCTCGCCCCGGGAGCACCCTAGAAGCCATGTCTOVRM1_0137_D06.b : ggggtcccccccaatgtaaaaccgatgcaggttccgtcccccccggggagccccttaagaSKNB1_0020_F01.b : GTCACCGAAGTGAAAACCGATGAGTTTCCTCGCCCCGGGAGCACCCTAGAAGCCATGTCT
20110601C-007731 : AAGCTAAAGCCTTACTTTCTCACAGATGGGACAGGAACAGTCACCCCAGCTAATGCCTCA ---------+---------+---------+---------+---------+---------+ 813LVRM1_0073_A08.b : UTR01_0055_D02.b : AAGCTAAAGCCTTACTTTCTCACAGATGGGACAGGGACAGTCACCCCAGCTAACGCCTCAOVRM1_0217_B02.b : tggtacgtc OVRM1_0071_D01.b : aaggcctcg LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : AAGCT OVRM1_0023_A10.b : TAAGCTAAAGCTTACTTTCTCACAGATGGGg PST01_0026_E06.b : AAGCTAAAGCCTTACTTTCTCACAGATGGGACAGGAACAGTCACCCCAGCTAATGCCTCAOVRM1_0137_D06.b : gaacttg SKNB1_0020_F01.b : AAGCTAAAGCCTTACTTTCTCACAGATGGGACAGGAACAGTCACCCCAGCTAATGCCTCA
20110601C-007731 : GGAATTAATGATGGTGCTGCTGCTGTGGTTCTTATGAAGAAGTCGGAGGCTGAGAACCGC ---------+---------+---------+---------+---------+---------+ 873LVRM1_0073_A08.b : UTR01_0055_D02.b : GGAATTAATGATGGTGCTGCTGCTGTGGTTCTTATGAAGAAGTCGGAGGCTGAAAACCGCOVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : GGAATTAATGATGGTGCTGCTGCTGTGGTTCTTATGAAGAAGTCAGAGGCTGAGAACCGCOVRM1_0137_D06.b : SKNB1_0020_F01.b : GGAATTAATGATGGTGCTGCTGCTGTGGTTCTTATGAAGAAGTCAGAGGCTGAGAACCGC
20110601C-007731 : GGGCTTACTCCTTTAGCACACATAGTTTCCTGGTCACAAGCAAGCGTGGAGCCTTCCATC ---------+---------+---------+---------+---------+---------+ 933LVRM1_0073_A08.b : UTR01_0055_D02.b : GGGCTTACTCCTTTAGCACACATAATTTTCTGGTCACAAGCAGGCGTGGAGCCTTCCATTOVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : GGGCTTACTCCTTTAGCACACATAGTTTCCTGGTCACAAGCAAGCGTGGAGCCTTCCATCOVRM1_0137_D06.b : SKNB1_0020_F01.b : GGGCTTACTCCTTTAGCACACATAGTTTCCTGGTCACAAAGCAGCGTGGAGCCTTCCATC
20110601C-007731 : ATGGGAACAGGCCCAATCCCGGCAATAAAGCAAGCTGTTGCAA................. ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : CTGGGAACAGGCCCCATTCCGGCAATAAAGCAAGCTGTTGCAAaagcaggttggtccctgOVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : ATGGGAACAGGCCCAATCCCCGCAATAAAGCAAGCTGTTGCAAaagcagtttgtcactggOVRM1_0137_D06.b : SKNB1_0020_F01.b : ATGGGGACAAGCCCCATCCCGGCNATAAAGCAAGCTGGTGCAAaaacaaggtggtcactt
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : gaaaatgtgaacttttttaaaatcacgaaaccttttgcaccggcctctgtttggcatagtOVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : aagatgtggaatatttgaaatcaacgaagctttgcagccgtctctgttgaatagttaaagOVRM1_0137_D06.b : SKNB1_0020_F01.b : gaagatgtgnacatatttgaaatcaacgaagcttttgcagccctctctgtttgcataatt
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : taaaaaaccttggaattaaaacccaaaaaaagggttaaccccggaaaggaagaaacctatOVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : aactaagataaaccccgaaaagtcaccactgaggaggagctataccttggccacccgctgOVRM1_0137_D06.b : SKNB1_0020_F01.b : aaagaacttggattaaaccccaaaaaagtcaaca
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : aaccccttgggggcccacccccctttgaaaaa OVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : gagcatctgntgcccatacttgtactcgttaccccatggacgccagggtgcaacttgggtOVRM1_0137_D06.b : SKNB1_0020_F01.b :
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : OVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : ccctgcctgtgctcgggntggatggaatgcattgtggtcaaaagaaaaatggcaaaattaOVRM1_0137_D06.b : SKNB1_0020_F01.b :
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : OVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : accacccttccttttaaaaataaaaaaatgggacacaaaacgattcctgggccaagtaagOVRM1_0137_D06.b : SKNB1_0020_F01.b :
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : OVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : aatggggcaccgtgggagggttatcccccaatatctgttgtgcccccaaaaaatgccaagOVRM1_0137_D06.b : SKNB1_0020_F01.b :
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : OVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : gaagaattccttaaaaggtgccttccttttatctcaagtttctttatggttataaaaggcOVRM1_0137_D06.b : SKNB1_0020_F01.b :
20110601C-007731 : ............................................................ ---------+---------+---------+---------+---------+---------+ 976LVRM1_0073_A08.b : UTR01_0055_D02.b : OVRM1_0217_B02.b : OVRM1_0071_D01.b : LVRM1_0123_H09.b : OVRM1_0074_C06.b : LVRM1_0115_G06.b : LVRM1_0102_G02.b : OVRM1_0023_A10.b : PST01_0026_E06.b : gc OVRM1_0137_D06.b : SKNB1_0020_F01.b :