Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-008298

Sequence: [FASTA format sequence] TAGGCGGTTA ATGACTGCGT CAGTAGGACG CGCGCCGTGG GAAGCCTGAC GAGCCTCATG GCTGCGGGTT GCTCAGAGGC TTCACGGCCA AAGGCGGCCT CGGAAGGGCC GGGGGTGGGA CCGGCCGGTG TCTTGCCTTG CCTAGAGCTG CCGACCTATG CGGCCGCTTG TGCGCTGGTG AGCAGCCGCT ACTCCTGCCT CGTGGCGGGG CCGCACCGGA GACACATCGC ATTGTCGCCG CGCTACCTTA ACAGGAAACG CACCGGTATC CGAGAACAGC TGGATGCAGA ACTCCTACGT TATTCCGAGA GCCTTTTAGG TGTACCCATT GCCTATGATA ACATCAAAGT AGTGGGTGAA CTAGGAGATA TTTATGATGA TCAAGGACAC ATTCATCTTA ACATTGAAGC AGATTTTGTT ATTTTCTGCC CTGAACCAGG GCAAAAGCTT ATGGGTACAA TTAATAAAGT GTCTTCCAGC CATATTGGCT GTTTAGTACA TGGGTGCTTC AATGCCTCCA TTCCTAAACC CGAGCAGATG CCAGCTGAGC AGTGGCAGAC TCTGGAGATA AATGTGGGTG ATGAACTAGA ATTTGAAGTA TTTCGCTTAG ACTCAGACGC TGCTGGAGTA TTCTGCATTC GTGGGAAAGT AAATGTTTCT AGTTTACAAA CCAAATGCCC TGCTATTCCT GAAGTAACAG AAACTGCCAC CGAAGAAGCG GCTGTTGAGA AACCTCCAAA GAAAAAAAAA AAAAAGAAGA AGAACCCAGA GCCATGTGAA GCAGAAGATG GTACCCACAG AGCTAACAGA TTTTGTTGAT GTTACCATTA AGGAAGAGAC AGATAGCCAG ATTAATAACA TTGTAAACGG TCTCTTGGAA AAAGACCCAA GGAAAAAAAA AGAAAAGGAG GAAAAGCCCC CAGAAAAACA GGACCAGAAC CTTGTTTTTC AGGGAATGAC TCCAGTGGTT AAAAAAGTTG ACCTTAAAAA AAAAAAAAAA AAAAAAAAGG CC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
TWISTNB DNA-directed RNA polymerase I subunit RPA43 [Homo sapiens]. 388 e-108 O

		Locus	Definition	Score	E value	FL
		TWISTNB	DNA-directed RNA polymerase I subunit RPA43 [Homo sapiens].	388	e-108	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Twistnb DNA-directed RNA polymerase I subunit RPA43 [Mus musculus]. 366 e-101 O

		Locus	Definition	Score	E value	FL
		Twistnb	DNA-directed RNA polymerase I subunit RPA43 [Mus musculus].	366	e-101	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC610923 PREDICTED: similar to TWIST neighbor [Canis familiaris]. 372 e-103

		Locus	Definition	Score	E value	FL
		LOC610923	PREDICTED: similar to TWIST neighbor [Canis familiaris].	372	e-103

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
TWISTNB DNA-directed RNA polymerase I subunit RPA43 [Bos taurus]. 393 e-112 O

		Locus	Definition	Score	E value	FL
		TWISTNB	DNA-directed RNA polymerase I subunit RPA43 [Bos taurus].	393	e-112	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100626323 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA43-like [Sus scrofa]. 424 e-131 O

TWISTNB TWIST neighbor [Sus scrofa]. 424 e-131 O

LOC100518087 PREDICTED: DNA-directed RNA polymerase I subunit RPA43-like [Sus scrofa]. 271 5e-73 O

Locus	Definition	Score	E value	FL
LOC100626323	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA43-like [Sus scrofa].	424	e-131	O
TWISTNB	TWIST neighbor [Sus scrofa].	424	e-131	O
LOC100518087	PREDICTED: DNA-directed RNA polymerase I subunit RPA43-like [Sus scrofa].	271	5e-73	O

Assembly Members: 7 TOP

Library Plate Loc. Read Name Accession Full Seq.

BFLT1 0071 A02 BFLT1_0071_A02.b FS645604
BFLT1 0071 G03 BFLT1_0071_G03.b FS645671
BKFL1 0082 G09 BKFL1_0082_G09.b FS653695
ITT01 0085 B12 ITT01_0085_B12.b BW983531
PTG01 0102 D11 PTG01_0102_D11.b FS712717
SPLT1 0024 B05 SPLT1_0024_B05.b HX241040
UTR01 0056 G11 UTR01_0056_G11.b BP464647 AK240342

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
297 A 4 0 0.571 W S CTA/L
G 3 0 0.429 CTG/L

Alignment: TOP

20110601C-008298 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
ITT01_0085_B12.b :                                                             
BFLT1_0071_G03.b :                                                             
UTR01_0056_G11.b :                                                        ctttt
BFLT1_0071_A02.b :                                                             
SPLT1_0024_B05.b :                                                             
PTG01_0102_D11.b :                                                             
BKFL1_0082_G09.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxx


20110601C-008298 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
ITT01_0085_B12.b :                     nnnccgtcaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0071_G03.b :              ggattcgttagncgtcgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0056_G11.b : tggtgcacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0071_A02.b :                nggatccgtcagctgtcgnatgxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0024_B05.b :                               nnnnncgagagtagaxxxxxxxxxxxxxxx
PTG01_0102_D11.b :                           nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
BKFL1_0082_G09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-008298 : ................TAGGCGGTTAATGACTGCGTCAGTAGGACGCGCGCCGTGGGAAG
                   ---------+---------+---------+---------+---------+---------+ 44
ITT01_0085_B12.b : xxxxxxxxxxxxxxxxTAGGCGGTTAATGACTGCGTCAGTAGGACGCGCGCCGTGGGAAG
BFLT1_0071_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxTAATGACTGCGTCAGTAGGACGCGCGCCGTGGGAAG
UTR01_0056_G11.b : xxxxxxxxxxxxxxxxxxxxxggtTAATGACTGCGTCAGTAGGACGCGCGCCGTGGGAAG
BFLT1_0071_A02.b : xxxxxxxxxxxxxxxxxxxxxggctttTGACTGCGTCAGTAGGACGCGCGCCGTGGGAAG
SPLT1_0024_B05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgGCGTCAGTAGGACGCGCGCCGTGGGAAG
PTG01_0102_D11.b : nnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxGTCAGTAGGACGCGCGCCGTGGGAAG
BKFL1_0082_G09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAG


20110601C-008298 : CCTGACGAGCCTCATGGCTGCGGGTTGCTCAGAGGCTTCACGGCCAAAGGCGGCCTCGGA
                   ---------+---------+---------+---------+---------+---------+ 104
ITT01_0085_B12.b : CCTGACGAGCCTCATGGCTGCGGGTTGCTCAGAGGCTTCACGGCCAAAGGCGGCCTCGGA
BFLT1_0071_G03.b : CCTGACGAGCCTCATGGCTGCGGGTTGCTCAGAGGCTTCACGGCCAAAGGCGGCCTCGGA
UTR01_0056_G11.b : CCTGACGATCCTCATGGCTGCGGGTTGCTCAGAGGCTTCACGGCCAAAGGCGGCCTCGGA
BFLT1_0071_A02.b : CCTGACGAGCCTCATGGCTGCGGGTTGCTCAGAGGCTTCACGGCCAAAGGCGGCCTCGGA
SPLT1_0024_B05.b : CCTGACGAGCCTCATGGCTGCGGGTTGCTCAGAGGCTTCACGGCCAAAGGCGGCCTCGGA
PTG01_0102_D11.b : CCTGACGAGCCTCATGGCTGCGGGTTGCTCAGAGGCTTCACGGCCAAAGGCGGCCTCGGA
BKFL1_0082_G09.b : CCTGACGATCCTCATGGCTGCGGGTTGCTCAGAGGCTTCACGGCCAAAGGCGGCCTCGGA


20110601C-008298 : AGGGCCGGGGGTGGGACCGGCCGGTGTCTTGCCTTGCCTAGAGCTGCCGACCTATGCGGC
                   ---------+---------+---------+---------+---------+---------+ 164
ITT01_0085_B12.b : AGGGCCGGGGGTGGGACCGGCCGGTGTCTTGCCTTGCCTAGAGCTGCCGACCTATGCGGC
BFLT1_0071_G03.b : AGGGCCGGGGGTGGGACCGGCCGGTGTCTTGCCTTGCCTAGAGCTGCCGACCTATGCGGC
UTR01_0056_G11.b : AGGGCCGGGGGTGGGACCGGCCGGTGTCTTGCCTTGCCTAGAGCTGCCGACCTATGCGGC
BFLT1_0071_A02.b : AGGGCCGGGGGTGGGACCGGCCGGTGTCTTGCCTTGCCTAGAGCTGCCGACCTATGCGGC
SPLT1_0024_B05.b : AGGGCCGGGGGTGGGACCGGCCGGTGTCTTGCCTTGCCTAGAGCTGCCGACCTATGCGGC
PTG01_0102_D11.b : AGGGCCGGGGGTGGGACCGGCCGGTGTCTTGCCTTGCCTAGAGCTGCCGACCTATGCGGC
BKFL1_0082_G09.b : AGGGCCGGGGGTGGGACCGGCCGGTGTCTTGCCTTGCCTAGAGCTGCCGACCTATGCGGC


20110601C-008298 : CGCTTGTGCGCTGGTGAGCAGCCGCTACTCCTGCCTCGTGGCGGGGCCGCACCGGAGACA
                   ---------+---------+---------+---------+---------+---------+ 224
ITT01_0085_B12.b : CGCTTGTGCGCTGGTGAGCAGCCGCTACTCCTGCCTCGTGGCGGGGCCGCACCGGAGACA
BFLT1_0071_G03.b : CGCTTGTGCGCTGGTGAGCAGCCGCTACTCCTGCCTCGTGGCGGGGCCGCACCGGAGACA
UTR01_0056_G11.b : CGCTTGTGCGCTGGTGAGCAGCCGCTACTCCTGCCTCGTGGCGGGGCCGCACCGGAGACA
BFLT1_0071_A02.b : CGCTTGTGCGCTGGTGAGCAGCCGCTACTCCTGCCTCGTGGCGGGGCCGCACCGGAGACA
SPLT1_0024_B05.b : CGCTTGTGCGCTGGTGAGCAGCCGCTACTCCTGCCTCGTGGCGGGGCCGCACCGGAGACA
PTG01_0102_D11.b : CGCTTGTGCGCTGGTGAGCAGCCGCTACTCCTGCCTCGTGGCGGGGCCGCACCGGAGACA
BKFL1_0082_G09.b : CGCTTGTGCGCTGGTGAGCAGCCGCTACTCCTGCCTCGTGGCGGGGCCGCACCGGAGACA


20110601C-008298 : CATCGCATTGTCGCCGCGCTACCTTAACAGGAAACGCACCGGTATCCGAGAACAGCTGGA
                   ---------+---------+---------+---------+---------+---------+ 284
ITT01_0085_B12.b : CATCGCATTGTCGCCGCGCTACCTTAACAGGAAACGCACCGGTATCCGAGAACAGCTGGA
BFLT1_0071_G03.b : CATCGCATTGTCGCCGCGCTACCTTAACAGGAAACGCACCGGTATCCGAGAACAGCTGGA
UTR01_0056_G11.b : CATCGCATTGTCGCCGCGCTACCTTAACAGGAAACGCACCGGTATCCGAGAACAGCTGGA
BFLT1_0071_A02.b : CATCGCATTGTCGCCGCGCTACCTTAACAGGAAACGCACCGGTATCCGAGAACAGCTGGA
SPLT1_0024_B05.b : CATCGCATTGTCGCCGCGCTACCTTAACAGGAAACGCACCGGTATCCGAGAACAGCTGGA
PTG01_0102_D11.b : CATCGCATTGTCGCCGCGCTACCTTAACAGGAAACGCACCGGTATCCGAGAACAGCTGGA
BKFL1_0082_G09.b : CATCGCATTGTCGCCGCGCTACCTTAACAGGAAACGCACCGGTATCCGAGAACAGCTGGA


20110601C-008298 : TGCAGAACTCCTACGTTATTCCGAGAGCCTTTTAGGTGTACCCATTGCCTATGATAACAT
                   ---------+---------+---------+---------+---------+---------+ 344
ITT01_0085_B12.b : TGCAGAACTCCTGCGTTATTCCGAGAGCCTTTTAGGTGTACCCATTGCCTATGATAACAT
BFLT1_0071_G03.b : TGCAGAACTCCTACGTTATTCCGAGAGCCTTTTAGGTGTACCCATTGCCTATGATAACAT
UTR01_0056_G11.b : TGCAGAACTCCTGCGTTATTCCGAGAGCCTTTTAGGTGTACCCATTGCCTATGATAACAT
BFLT1_0071_A02.b : TGCAGAACTCCTACGTTATTCCGAGAGCCTTTTAGGTGTACCCATTGCCTATGATAACAT
SPLT1_0024_B05.b : TGCAGAACTCCTACGTTATTCCGAGAGCCTTTTAGGTGTACCCATTGCCTATGATAACAT
PTG01_0102_D11.b : TGCAGAACTCCTACGTTATTCCGAGAGCCTTTTAGGTGTACCCATTGCCTATGATAACAT
BKFL1_0082_G09.b : TGCAGAACTCCTGCGTTATTCCGAGAGCCTTTTAGGTGTACCCATTGCCTATGATAACAT


20110601C-008298 : CAAAGTAGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACACATTCATCTTAACAT
                   ---------+---------+---------+---------+---------+---------+ 404
ITT01_0085_B12.b : CAAAGTAGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACACATTCATCTTAACAT
BFLT1_0071_G03.b : CAAAGTAGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACACATTCATCCTAACAT
UTR01_0056_G11.b : CAAAGTAGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACACATTCATCTTAACAT
BFLT1_0071_A02.b : CAAAGTAGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACACATTCATCTTAACAT
SPLT1_0024_B05.b : CAAAGTAGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACACATTCATCTTAACAT
PTG01_0102_D11.b : CAAAGTAGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACACATTCATCTTAACAT
BKFL1_0082_G09.b : CAAAGTAGTGGGTGAACTAGGAGATATTTATGATGATCAAGGACACATTCATCTTAACAT


20110601C-008298 : TGAAGCAGATTTTGTTATTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTACAATTAA
                   ---------+---------+---------+---------+---------+---------+ 464
ITT01_0085_B12.b : TGAAGCAGATTTTGTTATTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTACAATTAA
BFLT1_0071_G03.b : TGAAGCAGATTTTGTTATTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTACAATTAA
UTR01_0056_G11.b : TGAAGCAGATTTTGTTATTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTACAATTAA
BFLT1_0071_A02.b : TGAAGCAGATTTTGTTATTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTACAATTAA
SPLT1_0024_B05.b : TGAAGCAGATTTTGTTATTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTACAATTAA
PTG01_0102_D11.b : TGAAGCAGATTTTGTTATTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTACAATTAA
BKFL1_0082_G09.b : TGAAGCAGATTTTGTTATTTTCTGCCCTGAACCAGGGCAAAAGCTTATGGGTACAATTAA


20110601C-008298 : TAAAGTGTCTTCCAGCCATATTGGCTGTTTAGTACATGGGTGCTTCAATGCCTCCATTCC
                   ---------+---------+---------+---------+---------+---------+ 524
ITT01_0085_B12.b : TAAAGTGTCTTCCAGCCATATTGGCTGTTTAGTACATGGGTGCTTCAATGCCTCCATTCC
BFLT1_0071_G03.b : TAAAGTGTCTTCCAGCCATATTGGCTGTTTAGTACATGGGTGCTTCAATGCCTCCATTCC
UTR01_0056_G11.b : TAAAGTGTCTTCCAGCCATATTGGCTGTTTAGTACATGGGTGCTTCAATGCCTCCATTCC
BFLT1_0071_A02.b : TAAAGTGTCTTCCAGCCATATTGGCTGTTTAGTACATGGGTGCTTCAATGCCTCCATTCT
SPLT1_0024_B05.b : TAAAGTGTCTTCCAGCCATATTGGCTGTTTAGTACATGGGTGCTTCAATGCCTCCATTCC
PTG01_0102_D11.b : TAAAGTGTCTTCCAGCCATATTGGCTGTTTAGTACATGGGTGCTTCAATGCCTCCATTCC
BKFL1_0082_G09.b : TAAAGTGTCTTCCAGCCATATTGGCTGTTTAGTACATGGGTGCTTCAATGCCTCCATTCC


20110601C-008298 : TAAACCCGAGCAGATGCCAGCTGAGCAGTGGCAGACTCTGGAGATAAATGTGGGTGATGA
                   ---------+---------+---------+---------+---------+---------+ 584
ITT01_0085_B12.b : TAAACCCGAGCAGATGCCAGCTGAGCAGTGGCAGACTCTGGAGATAAATGTGGGTGATGA
BFLT1_0071_G03.b : TAAACCCGAGCAGATGCCAGCTGAGCAGTGGCAGACTCTGGAGATAAATGTGGGTGATGA
UTR01_0056_G11.b : TAAACCCGAGCAGATGCCAGCTGAGCAGTGGCAGACTCTGGAGATAAATGTGGGTGATGA
BFLT1_0071_A02.b : TAAACCCGAGCAGATGCCAGCTGAGCAGTGGCAGACTCTGGAGATAAATGTGGGTGATGA
SPLT1_0024_B05.b : TAAACCCGAGCAGATGCCAGCTGAGCAGTGGCAGACTCTGGAGATAAATGTGGGTGATGA
PTG01_0102_D11.b : TAAACCCGAGCAGATGCCAGCTGAGCAGTGGCAGACTCTGGAGATAAATGTGGGTGATGA
BKFL1_0082_G09.b : TAAACCCGAGCAGATGCCAGCTGAGCAGTGGCAGACTCTGGAGATAAATGTGGGTGATGA


20110601C-008298 : ACTAGAATTTGAAGTATTTCGCTTAGACTCAGACGCTGCTGGAGTATTCTGCATTCGTGG
                   ---------+---------+---------+---------+---------+---------+ 644
ITT01_0085_B12.b : ACTAGAATTTGAAGTATTTCGCTTAGACTCAGACGCTGCTGGAGTATTCTGCATTCGTGG
BFLT1_0071_G03.b : ACTAGAATTTGAAGTATTTCGCTTAGACTCAGACGCTGCTGGAGTATTCTGCATTCGTGG
UTR01_0056_G11.b : ACTAGAATTTGAAGTATTTCGCTTAGACTCAGACGCTGCTGGAGTATTCTGCATTCGTGG
BFLT1_0071_A02.b : ACTAGAATTTGAAGTATTTCGCTTAGACTCAGACGCTGCTGGAGTATTCTGCATTCGTGG
SPLT1_0024_B05.b : ACTAGAATTTGAAGTATTTCGCTTAGACTCAGACGCTGCTGGAGTATTCTGCATTCGTGG
PTG01_0102_D11.b : ACTAGAATTTGAGGTATTTCGCTTAGACTCAGACGCTGCTGGAATATTCTGCATTCGTGG
BKFL1_0082_G09.b : ACTAGAATTTGAAGTATTTCGCTTAGACTCAGACGCTGCTGGAGTATTCTGCATTCGTGG


20110601C-008298 : GAAAGTAAATGTTTCTAGTTTACAAACCAAATGCCCTGCTATTCCTGAAGTAACAGAAAC
                   ---------+---------+---------+---------+---------+---------+ 704
ITT01_0085_B12.b : GAAAGTAAATGTTTCTAGTTTACAAACCAAATGCCCTGCTATTCCTGAAGTAACAGAAAC
BFLT1_0071_G03.b : GAAAGTAAATGTTTCTAGTTTACAAACCAAATGCCCTGCTATTCCTGAAGTAACAGAAAC
UTR01_0056_G11.b : GAAAGTAAATGTTTCTAGTTTACAAACCAAATGCCCTGCTATTCCTGAAGTAACAGAAAC
BFLT1_0071_A02.b : GAAAGTAAATGTTTCTAGTTTACAAACCAAATGCCCTGCTATTCCTGAAGTAACAGAAAC
SPLT1_0024_B05.b : GAAAATAAATGTTTCTAGTTTTACAACCAAATGCCCTGCTATTCCTGAAATA*CAGAAAC
PTG01_0102_D11.b : GAAA*TAAATGTTTCTAGTTTACAAACAAAATGCCCTGCTATCCTTGAAGTAACAAAAAC
BKFL1_0082_G09.b : GAAAGTAAATGTTTCTAGTTTACAAACCAAATGCCCTGCTATTCCTGAAGTAACAGAAAC


20110601C-008298 : TGCC*ACCGAAGAAGCGGCTGTTGAGAAACCTCCAAAGAAAAAAAAAAAAAAGAAGAAGA
                   ---------+---------+---------+---------+---------+---------+ 763
ITT01_0085_B12.b : TGCC*ACCGAAGAAGCGGCTGTTGAGAAACCTCCCAAGAAGAAAAAGAAAAAGAAGAAAG
BFLT1_0071_G03.b : TGCC*ACCGAAGAAGCGGCTGTTGAGAAACCTCCAAAGAAaaaagaaaaaaaaaxxxxxx
UTR01_0056_G11.b : TGCC*ACCGAAGAAGCGGCTGTTGAGAAACCTCCAAAAAAAAAAAGAAAAAGAAAAAAGA
BFLT1_0071_A02.b : TGCC*ACCGAAGAAGCGGCTGTTGAGAAACCTCCAAAGAAAAAAAAAAAAAAaaaxxxxx
SPLT1_0024_B05.b : TGCC*ACCGAAAAAGCGGCTGTTTAGAAACttcccaggaagaatagaaaaagaaacgaac
PTG01_0102_D11.b : TGCCCACCGAAGAGGCGGCTGTTGAAAAAACTCCCAGGAAGAAAAGGAAAAAGgaggaag
BKFL1_0082_G09.b : CGCC*ACCGAAGAAAGCGCTGTTGAGAAACCTCCaaaaaaaaaaaaaannaaaaaaaann


20110601C-008298 : ACCCAGAGCCATGTGAAGCAGAAGATGGTACCCACAGAGCTAACAGATTTTGTTGATGTT
                   ---------+---------+---------+---------+---------+---------+ 823
ITT01_0085_B12.b : ACCCCGAGCCATGTGAAGCAGAAGATGGTACC*ACAGAGCTAACAGATTTTGTTGATGTT
BFLT1_0071_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0056_G11.b : CCCCAGAGCCATGTGAAGCAGAAGATGGTACCCACAGAGCTAACAGATTTTGTTGATGTT
BFLT1_0071_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0024_B05.b : ccgaaccctgttaaagccaaaaaggtaccccgacctaacaaatttgttgatttaccttta
PTG01_0102_D11.b : gcccccaacccctgttaagccaaaaaagggtcccccaacctaacaaattttgtttaagtt
BKFL1_0082_G09.b : cccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-008298 : ACCATTAAGGAAGAGACAGATAGCCAGATTAATAACATTGTAAACGGTC*TCTTGGAAAA
                   ---------+---------+---------+---------+---------+---------+ 882
ITT01_0085_B12.b : ACCATTAAGGAAGAGACAGATACCCAGATTAATAACATTGTAAACGGTC*TCTTGGAGAA
BFLT1_0071_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0056_G11.b : ACCATTAAGGAAGAGACAGATAGCCAGATTAATAACATTGTAAACGGGCCTCTTGGAAAA
BFLT1_0071_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0024_B05.b : ggaaaaaaccaaaacccaattataactttgttaacggccttttgaaaaagaccccaagaa
PTG01_0102_D11.b : ccctttagggaaaaccaaatccccaattataacttttaaaacggcccttggaaaaaaggc
BKFL1_0082_G09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-008298 : AGACCCAAGGAAAAAAAAAGAAAAGGAGGAAAAGCCCCCAGAAAAACAGG**ACCAGAAC
                   ---------+---------+---------+---------+---------+---------+ 940
ITT01_0085_B12.b : AGAGCCCNAGAAAGAAAAAGAAAAGGAGGAAAAGCCCCCAGAAGATCAGG**ACCAGGAA
BFLT1_0071_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0056_G11.b : AGACCCaagaaaaaaaaaaaaaaagaagaaaaaGCCACCAGAAAAATAGGGAACATGACC
BFLT1_0071_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0024_B05.b : aatatgaaaagaaaaaaaaccccaaaaatttggaccagaccctttttttaggccttgctc
PTG01_0102_D11.b : caaaaaaaaaaaaaaaaaaaagggcccatggtttccaactgggggggcggggccctttaa
BKFL1_0082_G09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtcggatggattcgaggcattcgg


20110601C-008298 : CTTGTTTTTCAGGGAAT*GACTCCAGTGGTTAAAAAAGTTGACCTTAAAAAAAAAAAAAA
                   ---------+---------+---------+---------+---------+---------+ 999
ITT01_0085_B12.b : CCTGTTTTTCAGGGAAT*GACTCCAGTGGTTACAAAAGTGCCCCTTaaagagaaaaaaaa
BFLT1_0071_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0056_G11.b : CTGGTTTTTCAGGGACTGGACTCCAGTGGTTTACCAAATTGACCATaaaaaaaaaaaaaa
BFLT1_0071_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0024_B05.b : ccgtgttcccaagtgccctacagagaaaaaaaaagaaggggggcattttctctcttttga
PTG01_0102_D11.b : aattcccctagggggcccagttttacgatacccttttttttgaaaaaggggcccctaagg
BKFL1_0082_G09.b : atcttcacgggatcaacaagcccaatcaattcccccggctgccctccccatagtgtgatt


20110601C-008298 : AAAAAAAAAGGCC...............................................
                   ---------+---------+---------+---------+---------+---------+ 1012
ITT01_0085_B12.b : aaaaaaaaaaaggcccatgtgcctccaactgcgggttccggccccttctaaattaccccc
BFLT1_0071_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0056_G11.b : aaaaaaaaaGGCCccatttggccccaacctccagggtccgggccccctcttaaattatcc
BFLT1_0071_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0024_B05.b : aacccccttaaagaaagggaaagaaattttttatgtccccaagaaaattattttaaaaat
PTG01_0102_D11.b : gggccttttataaacgggggggggccgctttttaacccctgggtgggaaaaccgcccttt
BKFL1_0082_G09.b : cataagcttcgccaagtgacctccaacgcttgaaccaatcccggggtcccccttccctgg


20110601C-008298 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1012
ITT01_0085_B12.b : gaggggcccaaactttacccgtaacccattttcctggtaaaaggggtccctaaagtgggt
BFLT1_0071_G03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0056_G11.b : ccccagggggccccaaccttaccctttaccctcctttttttg                 
BFLT1_0071_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtccggtttcaccaaatcgggga
SPLT1_0024_B05.b : ggtacccaaaaaacaaactttttatacaaaaagtttttttccattttttaaacaaacccc
PTG01_0102_D11.b : ggttttttggaaaaaacctttttttggggggggcaattgggacaaacccccccaaattaa
BKFL1_0082_G09.b : taaattgcccggaacggggaaaatttccttgcccttaacaaggggaccccggttgggaaa


20110601C-008298 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1012
ITT01_0085_B12.b : ctcaattaaaacctaggcctgggcccgcttttttaaaactccctggctggggaaaaactg
BFLT1_0071_G03.b : xxxxxxxxxxcccgaaaaaaattgggacaaaggccccccaaggcccgaacccaaaaaggc
UTR01_0056_G11.b :                                                             
BFLT1_0071_A02.b : aaccccggaaaaaactttgacacaagcccccaaagcccggaaccttaaaggccgtttggg
SPLT1_0024_B05.b : gtataatttttttgttgcaacaacaaccccactattgaaacccctttacgcttttttcaa
PTG01_0102_D11.b : tccccggggaaaaaaattttttggggaaggggtgaaaccccccccctctccgcgaaaatt
BKFL1_0082_G09.b : aaattcaaaccttgaaacgcgttcccacccctgaaatggaaacgaatcggtccaaagaaa


20110601C-008298 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1012
ITT01_0085_B12.b : caactttgaaatctttttgaagaaaccttatttcttggggtgggacaaattttcaaaaac
BFLT1_0071_G03.b : ccgttggtggggttttcaagagccccgcccctaaagaattcaaaattcccctccttaaga
UTR01_0056_G11.b :                                                             
BFLT1_0071_A02.b : ggtttttctaggctccccccccggaagattaaaaattacccttattagaggtggaacccc
SPLT1_0024_B05.b : aaaaagaagaccctcttctttctaaaatttaaaattcccccacaaatatagcgggaacaa
PTG01_0102_D11.b : ttctccccgattttttaaaaaatacccccgccgtgttttttttttttttttttttaaaac
BKFL1_0082_G09.b : tttttgaagaaaggaacccccccttttaaaaaacggggaagaaaatttttnnnccggngg


20110601C-008298 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1012
ITT01_0085_B12.b : ttcc                                                       
BFLT1_0071_G03.b : ggggaaaccccaggaatataaaaaagggtttcctgaaaactctcgggctttttgtcacac
UTR01_0056_G11.b :                                                             
BFLT1_0071_A02.b : ggggatattaaaacgggtttccccagaaacccttggccctttttaacccccttaggaaat
SPLT1_0024_B05.b : aaaaaaaagcgcgctttctgtctttaaggacaacagcgtgtcttattttggaaaatattg
PTG01_0102_D11.b : acgggttttgccgcccccccccccttgtgttttatacacccccctttgttggtttttttt
BKFL1_0082_G09.b : gaaagaaanggtttctttttcccgtgtttgttattgttgannnnnnnnnnnnnnnnnnnn


20110601C-008298 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1012
ITT01_0085_B12.b :                                                             
BFLT1_0071_G03.b : ccctataaaaaaatccttttcctggagagggggttctcaccccgcgggatatccgtgggg
UTR01_0056_G11.b :                                                             
BFLT1_0071_A02.b : tccctttctctggagaggggttcttacaccaggaaatctcgtggggcgcccccggg   
SPLT1_0024_B05.b : tagcgtaaatttccgtccacggacattttctttctgttattggcactcacgctc     
PTG01_0102_D11.b : tataacccccccccccccg                                        
BKFL1_0082_G09.b : nnnnnnn                                                    


20110601C-008298 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1012
ITT01_0085_B12.b :                                                             
BFLT1_0071_G03.b : gggcc                                                      
UTR01_0056_G11.b :                                                             
BFLT1_0071_A02.b :                                                             
SPLT1_0024_B05.b :                                                             
PTG01_0102_D11.b :                                                             
BKFL1_0082_G09.b :