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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008506

Length: 1,039

Sequence [FASTA format sequence]
TACCCGCAGG GCTTTTTGTC CTTTTGGAGA AGGGCAAACA GTACATGGCA GCAGGAATCA
ACCAGGGCCC TAGAGCACTG AGGCAGAATC AGGAGAACCT GGAGGAGACA GAGGCTGAAG
ACAATTAAAA TCAGCATCTA AATTGGCTCC CAACCCTGGG TAAAAGTCCC AGAGAGAAAC
TTATATCATG AAATTAATCG CCATCCTTTT CCTTTGCTCC AGGCTGCTAC CAAGTTTAAC
TCAGGAGTCT TCGCAAGAAA TTGACTGCAA CCACCAAGAT GTATTTAAGG CTGTGGACAC
GGCTTTGAAG AAATATAACA GTGGAAACAA AAGTGGCAAC CAGTTTGTAT TGTACCGAAT
AACCGAAGTC ACCAAAATTG ATAATCCTGA CATATTTTAT TCCTTCAAGT ACGAAATCAA
GGAGGGCGAC TGTCTTGTTC AAAGTGACAA AACCTGGCAG GACTGTGATT ACAAAGACCC
TGCACAAGCT GCCACAGGAG AATGCACAGT AACCGTGGCG AAGAGAGGCA ATGAGAAGTT
CTCCGTGGCT ACCCAGACCT GCCAGATTAC TCCAGCTGAG GGCCCTGTGG TGACAGCCCA
GTATGACTGT CTGGGCTGCC TGCACCCCAT ATCAACCTCA AGCCCTGAAC TGCAACCTGT
TCTGAGACAC ACCATTCAAC ACTTTAACAA CAAGAGTGAT CATCTCCACC TCTTTCATCT
TCATGAAATA AAAAGTGCCC AAAGACAGGT GGTGGCCGGA TGGAACTATG AGATTAATTA
TTTTATTGTG CAAACAAATT GTTCCAAGGA GAAGTTTCCA TCTTTAACTC CAGAGTGCAC
GTCCCTTTCA AATGGTGATA TCCATGAATG TACAGATAAA GCACATGTGG ATCTTCAGCT
AAGAGTTGCT TCCTTCTCAC AGGAATGTAG CCTTTATCCA GGGAAGGATT TTTGTACACC
ACTTTGTCAA GATTGCGCTG GCTGCCCCAG AGATATACCT GTCAACAGTC CAGAGCTGGG
AGAGCCCTCT AATCATTCC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKNG1kininogen-1 isoform 1 [Homo sapiens]. 429e-120O
Contig/Assembly ProteinKNG1kininogen-1 isoform 2 [Homo sapiens]. 429e-120O
Contig/Assembly ProteinKNG1kininogen-1 isoform 3 [Homo sapiens]. 363e-100O
Contig/Assembly ProteinFETUBfetuin-B precursor [Homo sapiens]. 60.82e-09O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKng1kininogen-1 isoform 1 [Mus musculus]. 3471e-95O
Contig/Assembly ProteinKng1kininogen-1 isoform 2 [Mus musculus]. 3471e-95O
Contig/Assembly ProteinKng1kininogen-1 isoform 3 [Mus musculus]. 3471e-95O
Contig/Assembly ProteinKng2kininogen 2 isoform 2 [Mus musculus]. 3384e-93O
Contig/Assembly ProteinKng2kininogen 2 isoform 1 [Mus musculus]. 3384e-93O
Contig/Assembly ProteinKng2kininogen 2 isoform 3 [Mus musculus]. 3384e-93O
Contig/Assembly ProteinFetubfetuin-B isoform 3 [Mus musculus]. 60.13e-09O
Contig/Assembly ProteinFetubfetuin-B isoform 1 [Mus musculus]. 60.13e-09O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC478666PREDICTED: similar to kininogen 1 [Canis familiaris]. 443e-124O
Contig/Assembly ProteinLOC478665PREDICTED: similar to Fetuin-B precursor (IRL685) (16G2) [Canis familiaris]. 59.36e-09O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKNG1kininogen-2 isoform I [Bos taurus]. 459e-129O
Contig/Assembly ProteinKNG1kininogen-2 isoform II [Bos taurus]. 454e-128O
Contig/Assembly ProteinLOC786403PREDICTED: Kininogen-1-like [Bos taurus]. 2263e-59O
Contig/Assembly ProteinFETUBfetuin-B precursor [Bos taurus]. 56.64e-08O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100623885PREDICTED: kininogen-1-like [Sus scrofa]. 572e-163O
Contig/Assembly ProteinLOC100517609PREDICTED: fetuin-B-like [Sus scrofa]. 525e-07O


Assembly Members: 12      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
KDN010095C11KDN01_0095_C11.bFS677993 
LNG010028F07LNG01_0028_F07.bBP438477 
LVRM10018B04LVRM1_0018_B04.bBP449132 
LVRM10038F09LVRM1_0038_F09.bCJ001694 
LVRM10042E11LVRM1_0042_E11.bCJ002008 AK394141
LVRM10122A08LVRM1_0122_A08.bBP448618 AK233327
LVRM10146A11LVRM1_0146_A11.bBP448848 
LVRM10168B02LVRM1_0168_B02.bCJ004467 
LVRM10200G06LVRM1_0200_G06.bCJ007039 
OVRM10110A10OVRM1_0110_A10.bBP145882 
TCH010007B05TCH01_0007_B05.bCJ022938 
TCH010011D01TCH01_0011_D01.bCJ023262 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
143C400.333B-
T080.667
427C080.667BSGGC/G
T400.333GGT/G


Alignment:      TOP

20110601C-008506 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
KDN01_0095_C11.b : ttttcctgcggt
LVRM1_0042_E11.b : ttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0122_A08.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0038_F09.b : gagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0018_B04.b : agttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0146_A11.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0110_A10.b : tagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0011_D01.b : nnntttgctaggantatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0200_G06.b : tcgttgtcxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0028_F07.b : catttattxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0168_B02.b : xxxxxxxxxxxxxxx
TCH01_0007_B05.b : nnnngggtaggacttgaca
20110601C-008506 : .........TACCCGCAGGGCTTTTTGTCCTTTTGGAGAAGGGCAAACAGTACATGGCAG
---------+---------+---------+---------+---------+---------+ 51
KDN01_0095_C11.b : ggctatggaTACCCGCAGGGCCATTTGTCCTTTTGGAGAAGG**CAACAGTACATGGCAG
LVRM1_0042_E11.b : xxxxxxxxxxxxxxxxxxxxtTTTTTGTCCTTTTGGAGAAGGGCAAACAGTACATGGCAG
LVRM1_0122_A08.b : xxxxxxxxxxxxxxxxxxxxxTTTTTGTCCTTTTGGAGAAGGGCAAACAGTACATGGCTG
LVRM1_0038_F09.b : xxxxxxxxxxxxxxxxxxxxxxTTTTGTCCTTTTGGAGAAGGGCAAACAGTACATGGCAG
LVRM1_0018_B04.b : xxxxxxxxxxxxxxxxxxxggaTTTTGTCCTTTTGGAGAAGGGCAAACAGTACATGGCAG
LVRM1_0146_A11.b : xxxxxxxxxxxxxxxxxxxxxxTTTTGTCCTTTTGGAGAAGGGCAAACAGTACATGGCAG
OVRM1_0110_A10.b : xxxxxxxxxxxxxxxxxxxxxxTTTTGTCCTTTTGGAGAAGGGCAAACAGTACATGGCGG
TCH01_0011_D01.b : xxxxxxxxxxxxxxxxxxxxxxTTTTGTCCTTTTGGAGAAGGGCAAACAGTACATGGCAG
LVRM1_0200_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTTTGGAGAAGGGCAAACAGTACATGGCAG
LNG01_0028_F07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTTTGGAGAAGGGCAAACAGTACATGGCAG
LVRM1_0168_B02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTGGAGAAGGGCAAACAGTACATGGCAG
TCH01_0007_B05.b : gtttgtacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxc
20110601C-008506 : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
---------+---------+---------+---------+---------+---------+ 111
KDN01_0095_C11.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
LVRM1_0042_E11.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
LVRM1_0122_A08.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
LVRM1_0038_F09.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
LVRM1_0018_B04.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
LVRM1_0146_A11.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
OVRM1_0110_A10.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
TCH01_0011_D01.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
LVRM1_0200_G06.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
LNG01_0028_F07.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
LVRM1_0168_B02.b : CAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
TCH01_0007_B05.b : aAGGAATCAACCAGGGCCCTAGAGCACTGAGGCAGAATCAGGAGAACCTGGAGGAGACAG
20110601C-008506 : AGGCTGAAGACAATTAAAATCAGCATCTAAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
---------+---------+---------+---------+---------+---------+ 171
KDN01_0095_C11.b : AGGCTGAAGACAATTAAAATCAGCATCTAAACTGGCTCCCAACCCTGGGTAAAAGTCCCA
LVRM1_0042_E11.b : AGGCTGAAGACAATTAAAATCAGCATCTAAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
LVRM1_0122_A08.b : AGGCTGAAGACAATTAAAATCAGCATCTAAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
LVRM1_0038_F09.b : AGGCTGAAGACAATTAAAATCAGCATCTAAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
LVRM1_0018_B04.b : AGGCTGAAGACAATTAAAATCAGCATCTAAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
LVRM1_0146_A11.b : AGGCTGAAGACAATTAAAATCAGCATCTGAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
OVRM1_0110_A10.b : AGGCTGAAGACAATTAAAATCAGCATCTAAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
TCH01_0011_D01.b : AGGCTGAAGACAATTAAAATCAGCATCTAAACTGGCTCCCAACCCTGGGTAAAAGTCCCA
LVRM1_0200_G06.b : AGGCTGAAGACAATTAAAATCAGCATCTAAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
LNG01_0028_F07.b : AGGCTGAAGACAATTAAAATCAGCATCTAAACTGGCTCCCAACCCTGGGTAAAAGTCCCA
LVRM1_0168_B02.b : AGGCTGAAGACAATTAAAATCAGCATCTAAATTGGCTCCCAACCCTGGGTAAAAGTCCCA
TCH01_0007_B05.b : AGGCTGAAGACAATTAAAATCAGCATCTAAACTGGCTCCCAACCCTGGGTAAAAGTCCCA
20110601C-008506 : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
---------+---------+---------+---------+---------+---------+ 231
KDN01_0095_C11.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
LVRM1_0042_E11.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
LVRM1_0122_A08.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
LVRM1_0038_F09.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
LVRM1_0018_B04.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
LVRM1_0146_A11.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
OVRM1_0110_A10.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
TCH01_0011_D01.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
LVRM1_0200_G06.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
LNG01_0028_F07.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
LVRM1_0168_B02.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
TCH01_0007_B05.b : GAGAGAAACTTATATCATGAAATTAATCGCCATCCTTTTCCTTTGCTCCAGGCTGCTACC
20110601C-008506 : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
---------+---------+---------+---------+---------+---------+ 291
KDN01_0095_C11.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
LVRM1_0042_E11.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
LVRM1_0122_A08.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
LVRM1_0038_F09.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
LVRM1_0018_B04.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
LVRM1_0146_A11.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
OVRM1_0110_A10.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
TCH01_0011_D01.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
LVRM1_0200_G06.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
LNG01_0028_F07.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
LVRM1_0168_B02.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
TCH01_0007_B05.b : AAGTTTAACTCAGGAGTCTTCGCAAGAAATTGACTGCAACCACCAAGATGTATTTAAGGC
20110601C-008506 : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
---------+---------+---------+---------+---------+---------+ 351
KDN01_0095_C11.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
LVRM1_0042_E11.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
LVRM1_0122_A08.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
LVRM1_0038_F09.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
LVRM1_0018_B04.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
LVRM1_0146_A11.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
OVRM1_0110_A10.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
TCH01_0011_D01.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
LVRM1_0200_G06.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGAGGCAACCAGTTTGTATT
LNG01_0028_F07.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
LVRM1_0168_B02.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
TCH01_0007_B05.b : TGTGGACACGGCTTTGAAGAAATATAACAGTGGAAACAAAAGTGGCAACCAGTTTGTATT
20110601C-008506 : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
---------+---------+---------+---------+---------+---------+ 411
KDN01_0095_C11.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
LVRM1_0042_E11.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
LVRM1_0122_A08.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
LVRM1_0038_F09.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
LVRM1_0018_B04.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
LVRM1_0146_A11.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
OVRM1_0110_A10.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
TCH01_0011_D01.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
LVRM1_0200_G06.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
LNG01_0028_F07.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
LVRM1_0168_B02.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
TCH01_0007_B05.b : GTACCGAATAACCGAAGTCACCAAAATTGATAATCCTGACATATTTTATTCCTTCAAGTA
20110601C-008506 : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
---------+---------+---------+---------+---------+---------+ 471
KDN01_0095_C11.b : CGAAATCAAGGAGGGTGCCTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
LVRM1_0042_E11.b : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
LVRM1_0122_A08.b : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
LVRM1_0038_F09.b : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
LVRM1_0018_B04.b : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
LVRM1_0146_A11.b : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
OVRM1_0110_A10.b : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
TCH01_0011_D01.b : CGAAATCAAGGAGGGTGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
LVRM1_0200_G06.b : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
LNG01_0028_F07.b : CGAAATCAAGGAGGGTGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
LVRM1_0168_B02.b : CGAAATCAAGGAGGGCGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
TCH01_0007_B05.b : CGAAATCAAGGAGGGTGACTGTCTTGTTCAAAGTGACAAAACCTGGCAGGACTGTGATTA
20110601C-008506 : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
---------+---------+---------+---------+---------+---------+ 531
KDN01_0095_C11.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
LVRM1_0042_E11.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
LVRM1_0122_A08.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
LVRM1_0038_F09.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
LVRM1_0018_B04.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
LVRM1_0146_A11.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
OVRM1_0110_A10.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
TCH01_0011_D01.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
LVRM1_0200_G06.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
LNG01_0028_F07.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
LVRM1_0168_B02.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
TCH01_0007_B05.b : CAAAGACCCTGCACAAGCTGCCACAGGAGAATGCACAGTAACCGTGGCGAAGAGAGGCAA
20110601C-008506 : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
---------+---------+---------+---------+---------+---------+ 591
KDN01_0095_C11.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
LVRM1_0042_E11.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
LVRM1_0122_A08.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
LVRM1_0038_F09.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
LVRM1_0018_B04.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
LVRM1_0146_A11.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
OVRM1_0110_A10.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
TCH01_0011_D01.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
LVRM1_0200_G06.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
LNG01_0028_F07.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
LVRM1_0168_B02.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
TCH01_0007_B05.b : TGAGAAGTTCTCCGTGGCTACCCAGACCTGCCAGATTACTCCAGCTGAGGGCCCTGTGGT
20110601C-008506 : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
---------+---------+---------+---------+---------+---------+ 651
KDN01_0095_C11.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
LVRM1_0042_E11.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
LVRM1_0122_A08.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCNAGCCCTGAACT
LVRM1_0038_F09.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
LVRM1_0018_B04.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
LVRM1_0146_A11.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
OVRM1_0110_A10.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
TCH01_0011_D01.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
LVRM1_0200_G06.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGGACT
LNG01_0028_F07.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
LVRM1_0168_B02.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
TCH01_0007_B05.b : GACAGCCCAGTATGACTGTCTGGGCTGCCTGCACCCCATATCAACCTCAAGCCCTGAACT
20110601C-008506 : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
---------+---------+---------+---------+---------+---------+ 711
KDN01_0095_C11.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
LVRM1_0042_E11.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
LVRM1_0122_A08.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTTAACACAAGAGTGATCATCTCCACCT
LVRM1_0038_F09.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
LVRM1_0018_B04.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
LVRM1_0146_A11.b : GGCACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
OVRM1_0110_A10.b : GCNACCTGTTCTGAGACACACCATTCAACACTTTAACNAACAGAGTGATCATCTCCACCT
TCH01_0011_D01.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
LVRM1_0200_G06.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACCACAAGAGTGATCATCTCCACCT
LNG01_0028_F07.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
LVRM1_0168_B02.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
TCH01_0007_B05.b : GCAACCTGTTCTGAGACACACCATTCAACACTTTAACAACAAGAGTGATCATCTCCACCT
20110601C-008506 : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCGGATGGAACTATG
---------+---------+---------+---------+---------+---------+ 770
KDN01_0095_C11.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCGGATGGAACTATG
LVRM1_0042_E11.b : CTTTCATCTTCATGGAAATAAAAGTGCCCAAAGACAGtggtggccggan
LVRM1_0122_A08.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGTGGGTGCCCGGATGGAACTATG
LVRM1_0038_F09.b : CTTTCATCTTCATGAAATAAAAAGTGCCCCAAGACAGGTGG
LVRM1_0018_B04.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCGGATGG
LVRM1_0146_A11.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCGGATGGNACTATG
OVRM1_0110_A10.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCGGATGGGACTATG
TCH01_0011_D01.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCGGATGGAACTATG
LVRM1_0200_G06.b : CTTTCATCTTCATGAAATAAAAggccccatagacaggtggtggccgn
LNG01_0028_F07.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCGGATGGAACTATG
LVRM1_0168_B02.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCcga
TCH01_0007_B05.b : CTTTCATCTTCATGAAATAAAAAGTGCCCAAAGACAGGT*GGTGGCCGGATGGAACTATG
20110601C-008506 : AGATTAATTATTTTATTGTGCAAACAAATTGTTCCAAGGAGAAGTTTCCATCTTTAACTC
---------+---------+---------+---------+---------+---------+ 830
KDN01_0095_C11.b : AGATTAATTATTTTATTGTGCAAACAAATTGTTCCAAGGAGAAGTTTCCATCTTTAACTC
LVRM1_0042_E11.b :
LVRM1_0122_A08.b : AGATTAATTATCTAATTGTGCAAACAAATTGT
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b : AGATTAATTATTTAATTGTG
OVRM1_0110_A10.b : AGATTAATTATT*TATTGTGCAAACAAttg
TCH01_0011_D01.b : AGATTAATTATTTTATTGTGCAAACAAATTGTTCCAAGGAGAAGTTTCCATCTTTAACTC
LVRM1_0200_G06.b :
LNG01_0028_F07.b : AGATTAATTATTTTATTGTGCAAACAAATTGTTCCCAGGAGAAGTTTCCATCTTTAACTC
LVRM1_0168_B02.b :
TCH01_0007_B05.b : AGATTAATTATTTTATTGTGCAAACAAATTGTTCCAAGGAGAAGTTTCCATCTTTAACTC
20110601C-008506 : CAGAGTGCACGTCCCTTTCAAATGGTGATATCCATGAATGTACAGATAAAGCACATGTGG
---------+---------+---------+---------+---------+---------+ 890
KDN01_0095_C11.b : CAGAGTGCACGTCCCTTTCAAATGGTGATATCCATGAATGTACAGATAAAGCACATGTGG
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b : CAGAGTGCACGTCCCTTTCAAATGGTGATATCCATGAATGTACAGATAAAGCACATGTGG
LVRM1_0200_G06.b :
LNG01_0028_F07.b : CAGAGTGCACGTCCCTTTCAAATGGTGATATCCATGAATGTACAGATAAAGCACATGTGG
LVRM1_0168_B02.b :
TCH01_0007_B05.b : CAGAGTGCACGTCCCTTTCAAATGGTGATATCCATGAATGTACAGATAAAGCACATGTGG
20110601C-008506 : ATCTTCAGCTAAGAGTTGCTTCCTTCTCACAGGAATGTAGCCTTTATCCAGGGAAGGATT
---------+---------+---------+---------+---------+---------+ 950
KDN01_0095_C11.b : ATCTTCAGCTAAGAGTTGCTTCCTTCTCACAGGAATGTAGCCTTTATCAAGGGAAGGATT
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b : ATCTTCAGCNTAGAGTTGCTTCCTTCTCACAGGAATGTAGCCCTTTATCAGGGAAGGATT
LVRM1_0200_G06.b :
LNG01_0028_F07.b : ATCTTCAGCTAAGAGTTGCTTCTTTCTCCCAGGAATGTAGCCtttatccaggggaaggat
LVRM1_0168_B02.b :
TCH01_0007_B05.b : ATCTTCAGCNTAGAGTTGCTTCCTTCTCACAGGAATGTAGCCTTTTATCAGGGAAGGATT
20110601C-008506 : TTTGTACACCACTTTGTCAAGATTGCGCTGGCTGCCCCAGAGATATACCTGTCAACAGTC
---------+---------+---------+---------+---------+---------+ 1010
KDN01_0095_C11.b : TTgtacatccactttgtcagatttgcgctggctgcccagagatatacctgtcaacgtcca
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b : TTTGTACACCACTTTGTCAGATTTGCGCTGGCTGCCccaaagatatacctgtccacagtc
LVRM1_0200_G06.b :
LNG01_0028_F07.b : tttgtacaacccacttgtcaaaatttgcccctggctgcccccagaaaaaatacctggcac
LVRM1_0168_B02.b :
TCH01_0007_B05.b : TTTGTACACCACTTTTGTCAGATTGCGCTGGCTGCCCCAGAGATATACCTGTCAACAGTC
20110601C-008506 : CAGAGCTGGGAGAGCCCTCTAATCATTCC...............................
---------+---------+---------+---------+---------+---------+ 1039
KDN01_0095_C11.b : gagctggaggagcctctaaatcattccatcccaagcttaatgcaaaaaacatgcagtcct
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b : cagagctgggagagcctctaaatcattccctcgccaaagcttatgcnaaaaaaatggcgt
LVRM1_0200_G06.b :
LNG01_0028_F07.b : cagttccaaaagctggaggaacccccaaaatcctttccatcccccaacctttaatggcaa
LVRM1_0168_B02.b :
TCH01_0007_B05.b : CAGAGCTGGGAGAGCCCTCTAATCATTCCatcgccnagctttatgcagagaaacatgcag
20110601C-008506 : ............................................................
---------+---------+---------+---------+---------+---------+ 1039
KDN01_0095_C11.b : ctatttcagaatgaccttgggaaaaagcaacattcaggggtggctggaaaaatattctat
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b : cttcaatttcaagaatggaccttgggaaaaagcaaccgtacagggggtggccggaaaaaa
LVRM1_0200_G06.b :
LNG01_0028_F07.b : aaaaacaaatgcatcccttctttttttcaaaaattggacccttggggggaaaaaaaccca
LVRM1_0168_B02.b :
TCH01_0007_B05.b : tcttctatttncagatgaccttgtgaaaaagcacagtacaagtgntggctggaaaaaata
20110601C-008506 : ............................................................
---------+---------+---------+---------+---------+---------+ 1039
KDN01_0095_C11.b : tgtgttccgggccagggaacactgtgtccagcaaatattggaaattgacaaaagtttgaa
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b : aaatccattgggtttccggcccgggaaaccccggttccagccaaattatgaaaatttaaa
LVRM1_0200_G06.b :
LNG01_0028_F07.b : aacagtaaacagggggggggggggcgtggggaaaaaaaaaaaatttttttccttattttt
LVRM1_0168_B02.b :
TCH01_0007_B05.b : ttctattgggttccggnncaggaancccatgttccagccaagtatgaaaagtgacgaagt
20110601C-008506 : ............................................................
---------+---------+---------+---------+---------+---------+ 1039
KDN01_0095_C11.b : atcaaaacctgggcaattctaaaggaaggctcggttcaggggacctgggagaaaaaaatc
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b : caaaatttt
LVRM1_0200_G06.b :
LNG01_0028_F07.b : gggggtttttcccccggcgggccccccgggggg
LVRM1_0168_B02.b :
TCH01_0007_B05.b : tggggaatcagaacctgggcaantccaagggtaagcctcggttacgggaccctgggagaa
20110601C-008506 : ............................................................
---------+---------+---------+---------+---------+---------+ 1039
KDN01_0095_C11.b : ccccacggcaaggaattactggaaaccctctgtggagagccccggttttcccttcaaaga
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b :
LVRM1_0200_G06.b :
LNG01_0028_F07.b :
LVRM1_0168_B02.b :
TCH01_0007_B05.b : aaccaccctctggcaagggttatcttggagacccccgttgaaggcgcccgggtttccttt
20110601C-008506 : ............................................................
---------+---------+---------+---------+---------+---------+ 1039
KDN01_0095_C11.b : aaag
LVRM1_0042_E11.b :
LVRM1_0122_A08.b :
LVRM1_0038_F09.b :
LVRM1_0018_B04.b :
LVRM1_0146_A11.b :
OVRM1_0110_A10.b :
TCH01_0011_D01.b :
LVRM1_0200_G06.b :
LNG01_0028_F07.b :
LVRM1_0168_B02.b :
TCH01_0007_B05.b : tt