Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-008625

Sequence: [FASTA format sequence] AAGACAGACG TGCTCTGCAG GGCGCCCGGG CCGTGCGCAC GAGGTTCCCG TGCGAGCCCC GCCGACCCCA GAGCCCGAGA CGGAGAGTGA GGAGCCCAGC CGCCGGCAGC CCGCGTCTGG CCCCGAGAAG CCGCCTGAAG ATGCCCCACC GCAACCTACA CGCGGCTGCC GTCCTCCTGC TCCTGGTCTT AAAGGAACAG CCTTCCAGCC CAGCCCCACT CAACGGATCC AAGTGGACCT ATTTGGGTCC CAATGGGGAG AAGAGCTGGT CCAAGAGCTA CCCATCATGT GGGGGCCTGC TACAGTCCCC AATAGACCTG CATGGTGACA TCCTCCAGTA CAACGCCAGC CTTGTACCCC TTGCCTTCCA AGGCTACAAT GAGACTGCCA ACCAGCAGTT TGTCCTGACC AACAACGGCC ATTCAGTGAA GCTGAAACTG TTCGAGGACA TGCACATCCA GGGCCTGGGG CACCGCTACA ATGCCTCACA GCTGCACCTT CACTGGGGGG ACCAGAATGA ACCCCACGGC TCCGAGCACA CTATCGGTGG GAAGCACTTT GCCGCTGAGC TGCATATTGT CTATTTTAAC TCGGACCTGT ACCCCAATGC CAGCATCGCC AGTGACAAGC CAGAAGGCCT CGCTGTCCTA GCTGTTCTCA TAGAGATGGG CTCTTTCAAT CCATCATATG ACAAGATCTT CAGTCACCTC CCAGATGTAA AGTACAAAGA CCAAAAAGTG CACATCCCGG GTTTCAGCAT TGAAGAGCTG CTGCCAGAGA GGCCTGAAGA GTACTACCGC TACAGGGGGT CCCTGACCAC ACCTCCTTGC CACCCCACTG TGCTCTGGAC GGTGTTCCGG AACCCTGTGC AATTTCACAG GAGCAGCTGC TGGCTTTGGA GACAGTCCTG TACTGCACAC ACATGGATGA CCCGTCCCCA GAGAGATGGT CCACAACTTC CNGGCAAGCA AAAGTTTGAC GAGAGGCTGG TGTATGTCTC CTTCCAAACA GTGCCAGACT CTACCTACGC AGGACTGAAC TTGGGCATCA TCCT

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
CA12 carbonic anhydrase 12 isoform 1 precursor [Homo sapiens]. 390 e-109 O

CA12 carbonic anhydrase 12 isoform 2 precursor [Homo sapiens]. 377 e-105 O

CA14 carbonic anhydrase 14 precursor [Homo sapiens]. 201 1e-51 O

CA6 carbonic anhydrase 6 precursor [Homo sapiens]. 156 3e-38 O

CA9 carbonic anhydrase 9 precursor [Homo sapiens]. 144 1e-34

CA13 carbonic anhydrase 13 [Homo sapiens]. 127 2e-29 O

CA1 carbonic anhydrase 1 [Homo sapiens]. 124 2e-28 O

CA1 carbonic anhydrase 1 [Homo sapiens]. 124 2e-28 O

CA1 carbonic anhydrase 1 [Homo sapiens]. 124 2e-28 O

CA1 carbonic anhydrase 1 [Homo sapiens]. 124 2e-28 O

Locus	Definition	Score	E value	FL
CA12	carbonic anhydrase 12 isoform 1 precursor [Homo sapiens].	390	e-109	O
CA12	carbonic anhydrase 12 isoform 2 precursor [Homo sapiens].	377	e-105	O
CA14	carbonic anhydrase 14 precursor [Homo sapiens].	201	1e-51	O
CA6	carbonic anhydrase 6 precursor [Homo sapiens].	156	3e-38	O
CA9	carbonic anhydrase 9 precursor [Homo sapiens].	144	1e-34
CA13	carbonic anhydrase 13 [Homo sapiens].	127	2e-29	O
CA1	carbonic anhydrase 1 [Homo sapiens].	124	2e-28	O
CA1	carbonic anhydrase 1 [Homo sapiens].	124	2e-28	O
CA1	carbonic anhydrase 1 [Homo sapiens].	124	2e-28	O
CA1	carbonic anhydrase 1 [Homo sapiens].	124	2e-28	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Car12 carbonic anhydrase 12 precursor [Mus musculus]. 362 e-100 O

Car14 carbonic anhydrase 14 precursor [Mus musculus]. 204 9e-53 O

Car9 carbonic anhydrase 9 precursor [Mus musculus]. 149 4e-36

Car6 carbonic anhydrase 6 precursor [Mus musculus]. 140 2e-33 O

Car1 carbonic anhydrase 1 [Mus musculus]. 136 2e-32 O

Car1 carbonic anhydrase 1 [Mus musculus]. 136 2e-32 O

Car13 carbonic anhydrase 13 [Mus musculus]. 127 2e-29 O

Car7 carbonic anhydrase 7 [Mus musculus]. 124 2e-28 O

Car15 carbonic anhydrase 15 precursor [Mus musculus]. 119 4e-27 O

Car2 carbonic anhydrase 2 [Mus musculus]. 118 9e-27 O

Locus	Definition	Score	E value	FL
Car12	carbonic anhydrase 12 precursor [Mus musculus].	362	e-100	O
Car14	carbonic anhydrase 14 precursor [Mus musculus].	204	9e-53	O
Car9	carbonic anhydrase 9 precursor [Mus musculus].	149	4e-36
Car6	carbonic anhydrase 6 precursor [Mus musculus].	140	2e-33	O
Car1	carbonic anhydrase 1 [Mus musculus].	136	2e-32	O
Car1	carbonic anhydrase 1 [Mus musculus].	136	2e-32	O
Car13	carbonic anhydrase 13 [Mus musculus].	127	2e-29	O
Car7	carbonic anhydrase 7 [Mus musculus].	124	2e-28	O
Car15	carbonic anhydrase 15 precursor [Mus musculus].	119	4e-27	O
Car2	carbonic anhydrase 2 [Mus musculus].	118	9e-27	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC478333 PREDICTED: similar to carbonic anhydrase XII isoform 1 precursor [Canis familiaris]. 370 e-102 O

LOC483180 PREDICTED: similar to carbonic anhydrase XIV precursor [Canis familiaris]. 206 2e-53 O

CA6 carbonic anhydrase 6 precursor [Canis lupus familiaris]. 157 2e-38 O

CA9 carbonic anhydrase 9 [Canis lupus familiaris]. 146 3e-35

LOC487030 PREDICTED: similar to Carbonic anhydrase XIII (Carbonate dehydratase XIII) (CA-XIII) [Canis familiaris]. 129 6e-30 O

CA1 carbonic anhydrase 1 [Canis lupus familiaris]. 121 1e-27 O

LOC489772 PREDICTED: similar to Carbonic anhydrase VII (Carbonate dehydratase VII) (CA-VII) [Canis familiaris]. 118 8e-27 O

CA2 carbonic anhydrase 2 [Canis lupus familiaris]. 114 2e-25 O

LOC480591 PREDICTED: similar to Carbonic anhydrase IV precursor (Carbonate dehydratase IV) (CA-IV) [Canis familiaris]. 113 3e-25 O

LOC482428 PREDICTED: similar to Receptor-type tyrosine-protein phosphatase zeta precursor (R-PTP-zeta) [Canis familiaris]. 112 8e-25 O

Locus	Definition	Score	E value	FL
LOC478333	PREDICTED: similar to carbonic anhydrase XII isoform 1 precursor [Canis familiaris].	370	e-102	O
LOC483180	PREDICTED: similar to carbonic anhydrase XIV precursor [Canis familiaris].	206	2e-53	O
CA6	carbonic anhydrase 6 precursor [Canis lupus familiaris].	157	2e-38	O
CA9	carbonic anhydrase 9 [Canis lupus familiaris].	146	3e-35
LOC487030	PREDICTED: similar to Carbonic anhydrase XIII (Carbonate dehydratase XIII) (CA-XIII) [Canis familiaris].	129	6e-30	O
CA1	carbonic anhydrase 1 [Canis lupus familiaris].	121	1e-27	O
LOC489772	PREDICTED: similar to Carbonic anhydrase VII (Carbonate dehydratase VII) (CA-VII) [Canis familiaris].	118	8e-27	O
CA2	carbonic anhydrase 2 [Canis lupus familiaris].	114	2e-25	O
LOC480591	PREDICTED: similar to Carbonic anhydrase IV precursor (Carbonate dehydratase IV) (CA-IV) [Canis familiaris].	113	3e-25	O
LOC482428	PREDICTED: similar to Receptor-type tyrosine-protein phosphatase zeta precursor (R-PTP-zeta) [Canis familiaris].	112	8e-25	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
CA12 PREDICTED: carbonic anhydrase XII-like [Bos taurus]. 393 e-109 O

CA12 PREDICTED: carbonic anhydrase XII-like [Bos taurus]. 393 e-109 O

CA14 PREDICTED: carbonic anhydrase XIV [Bos taurus]. 218 5e-57 O

CA14 carbonic anhydrase 14 [Bos taurus]. 218 5e-57 O

CA6 carbonic anhydrase 6 precursor [Bos taurus]. 147 2e-35 O

CA9 PREDICTED: carbonic anhydrase IX-like [Bos taurus]. 146 3e-35

CA9 PREDICTED: carbonic anhydrase IX-like isoform 3 [Bos taurus]. 146 3e-35

CA13 PREDICTED: carbonic anhydrase XIII [Bos taurus]. 130 1e-30 O

CA1 PREDICTED: carbonic anhydrase 1-like [Bos taurus]. 129 6e-30 O

CA1 PREDICTED: carbonic anhydrase 1-like [Bos taurus]. 129 6e-30 O

Locus	Definition	Score	E value	FL
CA12	PREDICTED: carbonic anhydrase XII-like [Bos taurus].	393	e-109	O
CA12	PREDICTED: carbonic anhydrase XII-like [Bos taurus].	393	e-109	O
CA14	PREDICTED: carbonic anhydrase XIV [Bos taurus].	218	5e-57	O
CA14	carbonic anhydrase 14 [Bos taurus].	218	5e-57	O
CA6	carbonic anhydrase 6 precursor [Bos taurus].	147	2e-35	O
CA9	PREDICTED: carbonic anhydrase IX-like [Bos taurus].	146	3e-35
CA9	PREDICTED: carbonic anhydrase IX-like isoform 3 [Bos taurus].	146	3e-35
CA13	PREDICTED: carbonic anhydrase XIII [Bos taurus].	130	1e-30	O
CA1	PREDICTED: carbonic anhydrase 1-like [Bos taurus].	129	6e-30	O
CA1	PREDICTED: carbonic anhydrase 1-like [Bos taurus].	129	6e-30	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100152749 PREDICTED: carbonic anhydrase 12-like, partial [Sus scrofa]. 236 1e-62 O

LOC100153371 PREDICTED: carbonic anhydrase 14-like [Sus scrofa]. 203 1e-52 O

CA9 PREDICTED: carbonic anhydrase 9 [Sus scrofa]. 152 3e-37

CA6 carbonic anhydrase 6 [Sus scrofa]. 150 1e-36 O

LOC100153972 PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]. 130 2e-30 O

CA1 PREDICTED: carbonic anhydrase 1 [Sus scrofa]. 127 1e-29 O

LOC100152714 PREDICTED: carbonic anhydrase 13 [Sus scrofa]. 125 3e-29 O

CA2 PREDICTED: carbonic anhydrase 2 [Sus scrofa]. 124 1e-28 O

PTPRZ1 PREDICTED: receptor-type tyrosine-protein phosphatase zeta [Sus scrofa]. 122 3e-28 O

LOC100622049 PREDICTED: carbonic anhydrase 3-like [Sus scrofa]. 117 1e-26 O

Locus	Definition	Score	E value	FL
LOC100152749	PREDICTED: carbonic anhydrase 12-like, partial [Sus scrofa].	236	1e-62	O
LOC100153371	PREDICTED: carbonic anhydrase 14-like [Sus scrofa].	203	1e-52	O
CA9	PREDICTED: carbonic anhydrase 9 [Sus scrofa].	152	3e-37
CA6	carbonic anhydrase 6 [Sus scrofa].	150	1e-36	O
LOC100153972	PREDICTED: ras-related protein Rab-8B-like [Sus scrofa].	130	2e-30	O
CA1	PREDICTED: carbonic anhydrase 1 [Sus scrofa].	127	1e-29	O
LOC100152714	PREDICTED: carbonic anhydrase 13 [Sus scrofa].	125	3e-29	O
CA2	PREDICTED: carbonic anhydrase 2 [Sus scrofa].	124	1e-28	O
PTPRZ1	PREDICTED: receptor-type tyrosine-protein phosphatase zeta [Sus scrofa].	122	3e-28	O
LOC100622049	PREDICTED: carbonic anhydrase 3-like [Sus scrofa].	117	1e-26	O

Assembly Members: 7 TOP

Library Plate Loc. Read Name Accession Full Seq.

CLNT1 0057 D07 CLNT1_0057_D07.b FS661553
KDN01 0008 H01 KDN01_0008_H01.b FS671826
KDN01 0046 D12 KDN01_0046_D12.b FS674375
KDN01 0052 A08 KDN01_0052_A08.b AK393416
KDN01 0070 E11 KDN01_0070_E11.b FS676016
KDN01 0096 C12 KDN01_0096_C12.b FS678070
OVRT1 0067 F11 OVRT1_0067_F11.b FS691913

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
148 A 5 0 0.714 W N CAC/H
G 2 0 0.286 CGC/R

Alignment: TOP

20110601C-008625 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
KDN01_0052_A08.b :                                                             
KDN01_0008_H01.b :                                                      nnccttn
KDN01_0070_E11.b :                                                             
KDN01_0096_C12.b :                                                             
OVRT1_0067_F11.b : nnggcttttnnnnnncccgtcgcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0057_D07.b :                      nnnnccgtctgctgtcgaggxxxxxxxxxxxxxxxxxxx
KDN01_0046_D12.b :                                                             


20110601C-008625 : .......................AAGACAGACGTGCTCTGCAGGGCGCCCGGGCCGTGCG
                   ---------+---------+---------+---------+---------+---------+ 37
KDN01_0052_A08.b :          agcgttggctctggAAGACAGACGTGCTCTGCAGGGCGCCCGGGCCGTGCG
KDN01_0008_H01.b : nnnnnnncctgcgttggctctggAAGACAGACGTGCTCTGCAGGGCGCCCGGGCCGTGCG
KDN01_0070_E11.b :       ttttcctgctgtggctcAAGACAGACGTGCTCTGCAGGGCGCCCGGGCCGTGCG
KDN01_0096_C12.b :   ttttcccgctgtggctactggAAGACAGACGTGCTCTGCAGGGCGCCCGGGCCGTGCG
OVRT1_0067_F11.b : xxxxxxxxxxxxxxxxxxxxxxxxgaACAGACGTGCTCTGCAGGGCGCCCGGGCCGTGCG
CLNT1_0057_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxGACGTGCTCTGCAGGGCGCCCGGGCCGTGCG
KDN01_0046_D12.b :                                                             


20110601C-008625 : CACGAGGTTCCCGTGCGAGCCCCGCCGACCCCAGAGCCCGAGACGGAGAGTGAGGAGCCC
                   ---------+---------+---------+---------+---------+---------+ 97
KDN01_0052_A08.b : CACGAGGTCCCTGTGCGAGCCCCGCCGACCCCAGAGCCCGAGACGGAGAGTGAGGAGCCC
KDN01_0008_H01.b : CACGAGGTTCCCGTGCGAGCCCCGCCGACCCCAGAGCCCGAGACGGAGAGTGAGGAGCCC
KDN01_0070_E11.b : CACGAGGTTCCCGTGCGAGCCCCGCCGACCCCAGAGCCCGAGACGGAGAGTGAGGAGCCC
KDN01_0096_C12.b : CACGAGGTTCCCGTGCGAGCCCCGCCGACCCCAGAGCCCGAGACGGAGAGTGAGGAGCCC
OVRT1_0067_F11.b : CACGAGGTTCCCGTGCGAGCCCCGCCGACCCCAGAGCCCGAGACGGAGAGTGAGGAGCCC
CLNT1_0057_D07.b : CACGAGGTTCCCGTGCGAGCCCCGCCGACCCCAGAGCCCGAGACGGAGAGTGAGGAGCCC
KDN01_0046_D12.b :        ccttttTGCGAGCCCCGCCGACCCCAGAGCCCGAGACGGAGAGTGAGGAGCCC


20110601C-008625 : AGCCGCCGGCAGCCCGCGTCTGGCCCCGAGAAGCCGCCTGAAGATGCCCCACCGCAACCT
                   ---------+---------+---------+---------+---------+---------+ 157
KDN01_0052_A08.b : AGCCGCCGGCAGCCCGCGTCTGGCCCCGAGAAGCCGCCTGAAGATGCCCCGCCGCAACCT
KDN01_0008_H01.b : AGCCGCCGGCAGCCCGCGTCTGGCCCCGAGAAGCCGCCTGAAGATGCCCCACCGCAACCT
KDN01_0070_E11.b : AGCCGCCGGCAGCCCGCGTCTGGCCCCGAGAAGCCGCCTGAAGATGCCCCGCCGCAACCT
KDN01_0096_C12.b : AGCCGCCGGCAGCCCGCGTCTGGCCCCGAGAAGCCGCCTGAAGATGCCCCACCGCAACCT
OVRT1_0067_F11.b : AGCCGCCGGCAGCCCGCGTCTGGCCCCGAGAAGCCGCCTGAAGATGCCCCACCGCAACCT
CLNT1_0057_D07.b : AGCCGCCGGCAGCCCGCGTCTGGCCCCGAGAAGCCGCCTGAAGATGCCCCACCGCAACCT
KDN01_0046_D12.b : AGCCGCCGGCAGCCCGCGTCTGGCCCCGAGAAGCCGCCTGAAGATGCCCCACCGCAACCT


20110601C-008625 : ACACGCGGCTGCCGTCCTCCTGCTCCTGGTCTTAAAGGAACAGCCTTCCAGCCCAGCCCC
                   ---------+---------+---------+---------+---------+---------+ 217
KDN01_0052_A08.b : ACACGCGGCTGCCGTCCTCCTGCTCCTGGTCTTAAAGGAACAGCCTTCCAGCCCAGCCCC
KDN01_0008_H01.b : ACACGCGGCTGCCGTCCTCCTGCTCCTGGTCTTAAAGGAACAGCCTTCCAGCCCAGCCCC
KDN01_0070_E11.b : ACACGCGGCTGCCGTCCTCCTGCTCCTGGTCTTAAAGGAACAGCCTTCCAGCCCAGCCCC
KDN01_0096_C12.b : ACACGCGGCTGCCGTCCTCCTGCTCCTGGTCTTAAAGGAACAGCCTTCCAGCCCAGCCCC
OVRT1_0067_F11.b : ACACGCGGCTGCCGTCCTCCTGCTCCTGGTCTTAAAGGAACAGCCTTCCAGCCCAGCCCC
CLNT1_0057_D07.b : ACACGCGGCTGCCGTCCTCCTGCTCCTGGTCTTAAAGGAACAGCCTTCCAGCCCAGCCCC
KDN01_0046_D12.b : ACACGCGGCTGCCGTCCTCCTGCTCCTGGTCTTAAAGGAACAGCCTTCCAGCCCAGCCCC


20110601C-008625 : ACTCAACGGATCCAAGTGGACCTATTTGGGTCCCAATGGGGAGAAGAGCTGGTCCAAGAG
                   ---------+---------+---------+---------+---------+---------+ 277
KDN01_0052_A08.b : ACTCAACGGATCCAAGTGGACCTATTTGGGTCCCAATGGGGAGAAGAGCTGGTCCAAGAG
KDN01_0008_H01.b : ACTCAACGGATCCAAGTGGACCTATTTGGGTCCCAATGGGGAGAAGAGCTGGTCCAAGAG
KDN01_0070_E11.b : ACTCAACGGATCCAAGTGGACCTATTTGGGTCCCAATGGGGAGAAGAGCTGGTCCAAGAG
KDN01_0096_C12.b : ACTCAACGGATCCAAGTGGACCTATTTGGGTCCCAATGGGGAGAAGAGCTGGTCCAAGAG
OVRT1_0067_F11.b : ACTCAACGGATCCAAGTGGACCTATTTGGGTCCCAATGGGGAGAAGAGCTGGTCCAAGAG
CLNT1_0057_D07.b : ACTCAACGGATCCAAGTGGACCTATTTGGGTCCCAATGGGGAGAAGAGCTGGTCCAAGAG
KDN01_0046_D12.b : ACTCAACGGATCCAAGTGGACCTATTTGGGTCCCAATGGGGAGAAGAGCTGGTCCAAGAG


20110601C-008625 : CTACCCATCATGTGGGGGCCTGCTACAGTCCCCAATAGACCTGCATGGTGACATCCTCCA
                   ---------+---------+---------+---------+---------+---------+ 337
KDN01_0052_A08.b : CTACCCATCATGTGGGGGCCTGCTACAGTCCCCAATAGACCTGCATGGTGACATCCTCCA
KDN01_0008_H01.b : CTACCCATCATGTGGGGGCCTGCTACAGTCCCCAATAGACCTGCATGGTGACATCCTCCA
KDN01_0070_E11.b : CTACCCATCATGTGGGGGCCTGCTACAGTCCCCAATAGACCTGCATGGTGACATCCTCCA
KDN01_0096_C12.b : CTACCCATCATGTGGGGGCCTGCTACAGTCCCCAATAGACCTGCATGGTGACATCCTCCA
OVRT1_0067_F11.b : CTACCCATCATGTGGGGGCCTGCTACAGTCCCCAATAGACCTGCATGGTGACATCCTCCA
CLNT1_0057_D07.b : CTACCCATCATGTGGGGGCCTGCTGCAGTCCCCAATAGACCTGCATGGTGACATCCTCCA
KDN01_0046_D12.b : CTACCCATCATGTGGGGGCCTGCTACAGTCCCCAATAGACCTGCATGGTGACATCCTCCA


20110601C-008625 : GTACAACGCCAGCCTTGTACCCCTTGCCTTCCAAGGCTACAATGAGACTGCCAACCAGCA
                   ---------+---------+---------+---------+---------+---------+ 397
KDN01_0052_A08.b : GTACAACGCCAGCCTTGTACCCCTTGCCTTCCAAGGCTACAATGAGACTGCCAACCAGCA
KDN01_0008_H01.b : GTACAACGCCAGCCTTGTACCCCTTGCCTTCCAAGGCTACAATGAGACTGCCAACCAGCA
KDN01_0070_E11.b : GTACAACGCCAGCCTTGTACCCCTTGCCTTCCAAGGCTACAATGAGACTGCCAACCAGCA
KDN01_0096_C12.b : GTACAACGCCAGCCTTGTACCCCTTGCCTTCCAAGGCTACAATGAGACTGCCAACCAGCA
OVRT1_0067_F11.b : GTACAACGCCAGCCTTGTACCCCTTGCCTTCCAAGGCTACAATGAGACTGCCAACCAGCA
CLNT1_0057_D07.b : GTACAACGCCAGCCTTGTACCCCTTGCCTTCCAAGGCTACAATGAGACTGCCAACCAGCA
KDN01_0046_D12.b : GTACAACGCCAGCCTTGTACCCCTTGCCTTCCAAGGCTACAATGAGACTGCCAACCAGCA


20110601C-008625 : GTTTGTCCTGACCAACAACGGCCATTCAGTGAAGCTGAAACTGTTCGAGGACATGCACAT
                   ---------+---------+---------+---------+---------+---------+ 457
KDN01_0052_A08.b : GTTTGTCCTGACCAACAACGGCCATTCAGTGAAGCTGAAACTGTTCGAGGACATGCACAT
KDN01_0008_H01.b : GTTTGTCCTGACCAACAACGGCCATTCAGTGAAGCTGAAACTGTTCGAGGACATGCACAT
KDN01_0070_E11.b : GTTTGTCCTGACCAACAACGGCCATTCAGTGAAGCTGAAACTGTTCGAGGACATGCACAT
KDN01_0096_C12.b : GTTTGTCCTGACCAACAACGGCCATTCAGTGAAGCTGAAACTGTTCGAGGACATGCACAT
OVRT1_0067_F11.b : GTTTGTCCTGACCAACAACGGCCATTCAGTGAAGCTGAAACTGTTCGAGGACATGCACAT
CLNT1_0057_D07.b : GTTTGTCCTGACCAACAACGGCCATTCAGTGAAGCTGAAACTGTTCGAGGACATGCACAT
KDN01_0046_D12.b : GTTTGTCCTGACCAACAACGGCCATTCAGTGAAGCTGAAACTGTTCGAGGACATGCACAT


20110601C-008625 : CCAGGGCCTGGGGCACCGCTACAATGCCTCACAGCTGCACCTTCACTGGGGGGACCAGAA
                   ---------+---------+---------+---------+---------+---------+ 517
KDN01_0052_A08.b : CCAGGGCCTGGGGCACCGCTACAATGCCTCACAGCTGCACCTTCACTGGGGGGACCAGAA
KDN01_0008_H01.b : CCAGGGCCTGGGGCACCGCTACAATGCCTCACAGCTGCACCTTCACTGGGGGGACCAGAA
KDN01_0070_E11.b : CCAGGGCCTGGGGCACCGCTACAATGCCTCACAGCTGCACCTTCACTGGGGGGACCAGAA
KDN01_0096_C12.b : CCAGGGCCTGGGGCACCGCTACAATGCCTCACAGCTGCACCTTCACTGGGGGGACCAGAA
OVRT1_0067_F11.b : CCAGGGCCTGGGGCACCGCTACAATGCCTCACAGCTGCACCTTCACTGGGGGGACCAGAA
CLNT1_0057_D07.b : CCAGGGCCTGGGGCACCGCTACAATGCCTCACAGCTGCACCTTCACTGGGGGGACCAGAA
KDN01_0046_D12.b : CCAGGGCCTGGGGCACCGCTACAATGCCTCACAGCTGCACCTTCACTGGGGGGACCAGAA


20110601C-008625 : TGAACCCCACGGCTCCGAGCACACTATCGGTGGGAAGCACTTTGCCGCTGAGCTGCATAT
                   ---------+---------+---------+---------+---------+---------+ 577
KDN01_0052_A08.b : TGAACCCCACGGCTCCGAGCACATTATCGGTGGGAAGCACTTTGCCGCTGAGCTGCATAT
KDN01_0008_H01.b : TGAACCCCACGGCTCCGAGCACACTATCGGTGGGAAGCACTTTGCCGCTGAGCTGCATAT
KDN01_0070_E11.b : TGAACCCCACGGCTCCGAGCACACTATCGGTGGGAAGCACTTTGCCGCTGAGCTGCATAT
KDN01_0096_C12.b : TGAACCCCACGGCTCCGAGCACACTATCGGTGGGAAGCACTTTGCCGCTGAGCTGCATAT
OVRT1_0067_F11.b : TGAACCCCACGGCTCCGAGCACACTATCGGTGGGAAGCACTTTGCCGCTGAGCTGCATAT
CLNT1_0057_D07.b : TGAACCCCACGGCTCCGAGCACACTATCGGTGGGAAGCACTTTGCCGCTGAGCTGCATAT
KDN01_0046_D12.b : TGAACCCCACGGCTCCGAGCACACTATCGGTGGGAAGCACTTTGCCGCTGAGCTGCATAT


20110601C-008625 : TGTCTATTTTAACTCGGACCTGTACCCCAATGCCAGCATCGCCAGTGACAAGCCAGAAGG
                   ---------+---------+---------+---------+---------+---------+ 637
KDN01_0052_A08.b : TGTCTATTTTAACTCGGACCTGTACCCCAATGCCAGCATCGCCAGTGACAAGCCAGAAGG
KDN01_0008_H01.b : TGTCTATTTTAACTCGGACCTGTACCCCAATGCCAGCATCGCCAGTGACAAGCCAGAAGG
KDN01_0070_E11.b : TGTCTATTTTAACTCGGACCTGTACCCCAATGCCAGCATCGCCAGTGACAAGCCAGAAGG
KDN01_0096_C12.b : TGTCTATTTTAACTCGGACCTGTACCCCAATGCCAGCATCGCCAGTGACAAGCCAGAAGG
OVRT1_0067_F11.b : TGTCTATTTTAACTCGGACCTGTACCCCAATGCCAGCATCGCCAGTGACAAGCCAGAAGG
CLNT1_0057_D07.b : TGTCTATTTTAACTCGGACCTGTACCCCAATGCCAGCATCGCCAGTGACAAGCCAGAAGG
KDN01_0046_D12.b : TGTCTATTTTAACTCGGACCTGTACCCCAATGCCAGCATCGCCAGTGACAAGCCATAAGG


20110601C-008625 : CCTCGCTGTCCTAGCTGTTCTCATAGAGATGGG*CTCTTTCAATCCATCATATGACAAGA
                   ---------+---------+---------+---------+---------+---------+ 696
KDN01_0052_A08.b : CCTCGCTGTCCTAGCTGTTCTCATAGAGATGGG*CTCTTTCAATCCATCATATGACAAGA
KDN01_0008_H01.b : CCTCGCTGTCCTAGCTGTTCTCATAGAGATGGG*CTCTTTCAATCCATCATATGACAAGA
KDN01_0070_E11.b : CCTCGCTGTCCTAGCTGTTCTCATAGAGATGGG*CTCTTTCAATCCATCATATGACAAGA
KDN01_0096_C12.b : CCTCGCTGTCCTAGCTGTTCTCATAGAGATGGG*CTCTTTCAATCCATCATATGACAAGA
OVRT1_0067_F11.b : CCTCGCTGTCCTAGCTGTTCTCATAGAGATGGG*CTCTTTCAATCCATCATATGACAAGA
CLNT1_0057_D07.b : CCTCGCTGTCCTAGCTGTTCTCATAGAGATGGG*CTCTTTCAATCCATCATATGACAAGA
KDN01_0046_D12.b : CCTCGCTGTCCTAGCTGTTCTCATAAAGATGGGGCTCTTTCAATCCATCATATGACAAGA


20110601C-008625 : T*CTTCAGTCACCTCCCAGATGTAAAGTACAAAGACCAAAAAGTGCAC*ATCCCGGGTTT
                   ---------+---------+---------+---------+---------+---------+ 754
KDN01_0052_A08.b : T*CTTCAGTCACCTCCCAGATGTAAAGTACAAAGACCAAAAAGTGCAC*ATCCCGGGTTT
KDN01_0008_H01.b : T*CTTCAGTCACCTCCCAGATGTAAAGTACAAAGACCAAAAAGTGCAC*ATCCCGGGTTT
KDN01_0070_E11.b : T*CTTCAGTCACCTCCCAGATGTAAAGTACAAAGACCAAAAAGTGCAC*ATCCCGGGTTT
KDN01_0096_C12.b : T*CTTCAGTCACCTCCCAGATGTAAAGTACAAAGACCAAAAAGTGCAC*ATCCCGGGTTT
OVRT1_0067_F11.b : T*CTTCAGTCACCTCCCAGATGTAAAGTACAAAGACCAAAAAGTGCAC*ATCCCGGGTTT
CLNT1_0057_D07.b : T*CTTCACTCACCTCCCAGATGTAAAGTACAAAGACCAAAAAGTGCAC*ATCCCGGGTTT
KDN01_0046_D12.b : TTCTTCAGTCACCTCCCAGATGTAAAGTATAAAAACCAAAAAGTGCACAATCCCGGGTTT


20110601C-008625 : CAGCATTGAAGAGCTGCTGCCAGAGAGGCCTGAAGAGTACTACCGCTACAGGGGGTCCCT
                   ---------+---------+---------+---------+---------+---------+ 814
KDN01_0052_A08.b : CAGCATTGAAGAGCTGCTGCCAGAGAGGCCTGAAAAGTACTACCGCTACAGGGGGTTCCT
KDN01_0008_H01.b : CAGCATTGAAGAGCTGCTGCCAGAGAGGCCTGAAGAGTACTACCGCTACAGGGGGTCCCT
KDN01_0070_E11.b : CAGCATTGAAGAGCTGCTGCCAGAGAGGCCTGAAGAGTACTACCGCTACAGGGGGTCCCT
KDN01_0096_C12.b : CAGCATTGAAGAGCTGCTGCCAGAGAGGCCTGAAGAGTACTACCGCTACAGGGGGTCCCT
OVRT1_0067_F11.b : CAGCATTGAAGAGCTGCTGCCAGAGAGGCCTGAAGAGTACTACCGCTACAGGGGGTCCCT
CLNT1_0057_D07.b : CAGCATTGAAGAGCTGCTGCCAGAGAGGCCTGAAGAGTACTACCGCTACAGGGGGTCCCT
KDN01_0046_D12.b : CAGCTTTGAAGAGCTGCTGCCAGAGAGGCCTGAATAGTACTACCcgttacgaggggtccc


20110601C-008625 : GACCACACCTCCTTGCCACCCCACTGTGCTCTGGACGGTGTTCCGGAACCCTGTGCA*AT
                   ---------+---------+---------+---------+---------+---------+ 873
KDN01_0052_A08.b : GACCACACCTCCTTGCCACCCCA*TGTGCTCTGGACGGTGTTCCGGAACCCTGTGCAAAT
KDN01_0008_H01.b : GACCACACCTCCTTGCCACCCCACTGTGCTCTGGACGGTGTTCCGGAACCCTGTGCA*AT
KDN01_0070_E11.b : GACCACACCTCCTTGCCACCCCACTGTGCTCTGGACGGTGTTCCGGAACCCTGTGCAAAT
KDN01_0096_C12.b : GACCACACCTCCTTGCCACCCCACTGTGCTCTGGACGGTGTTCCGGAACCCTGTGCAAAT
OVRT1_0067_F11.b : GACCACACCTCCTTGCCACCCCACTGTGCTCTGGACGGTGTTCTGGAACCCTGTGCCAAT
CLNT1_0057_D07.b : GAACACACCTCCTTTGCACCCCACTGTGCTCTGGACGGTGTTCCGGAACCCTGTGCA*AA
KDN01_0046_D12.b : tgaactaacctcctttgcacccccattgtgctctggacggggttctggaacctggtgcaa


20110601C-008625 : TTCACAGGAGCAGCTGCTGGCTTTGGAGACAGTCCTGTACTGCACACACATGGATGAC*C
                   ---------+---------+---------+---------+---------+---------+ 932
KDN01_0052_A08.b : TTCACAGGAACAGCTGCTGGCTTTGGAAACAGTCCTGTACTGCACACCCTTGGATGAC*C
KDN01_0008_H01.b : TTCACAGGAGCAGCTGCTGGCTTTGGAGACAGTCCTGTACTGCACACACATGGATGAC*C
KDN01_0070_E11.b : TTCACAGGAGCAGCCGCTGGCTTTGGAGACAGTCCTGTACTGCACACACATGGATGAC*C
KDN01_0096_C12.b : TTCACAGGAGCAGCTGCTGGCTTTGGAGACAGTCCTGTACTGCACACACATGGATGACCC
OVRT1_0067_F11.b : TTCACAGGAGCAGCTGCTGCCTTTGGAGACAGTCCTGTACTGCACACACATGGATGAC*C
CLNT1_0057_D07.b : TTCACAGGAGCAGCTGCTGGCTT*GGAGACAGTCCTGTACTGCAacacatgaatgacccg
KDN01_0046_D12.b : atttcacaggaacagccgtggtggttttgggagacagcctgtagtggccaaacatggatt


20110601C-008625 : CGTCCCCAGAGAGATGGTCCACAACTTCCNGGCAAGCAAAAGTTTGACGAGAGGCTGGTG
                   ---------+---------+---------+---------+---------+---------+ 992
KDN01_0052_A08.b : CGTCCCccaaagagatggtcaacaacttccgcaggtccaaaagtttgacgagaggctggg
KDN01_0008_H01.b : CGTCCCcagagagatggtcnaacacttccngcagtcnaaagttnngacgagagctggtgt
KDN01_0070_E11.b : CGTCCCCAGAGAGATGGGTCACAACTTCCNGGCAGTCAAAAGTTTGACGAGAGGCTGGTG
KDN01_0096_C12.b : CGTCCCCAGAGAGATGGTCAAACACTTCCNNGGCAGTCAAAGTTTGACGAGAGGCTGGTG
OVRT1_0067_F11.b : CGTCCCccagagagatggtcaacacttcccggcgggtcaaaattttgacaagaggctggt
CLNT1_0057_D07.b : tcccccaagagatggtcacaactcccggcaggtccaaatttgaccagagctggggtatgt
KDN01_0046_D12.b : gaccctccccctaaaaaataggtgaaacactttcggcgaggtccaaaagtttggacaaag


20110601C-008625 : TATGTCTCCTTCCAAACAGTGCCAGACTCTACCTACGCAGGACTGAACTTGGGCATCATC
                   ---------+---------+---------+---------+---------+---------+ 1052
KDN01_0052_A08.b : ggttgttcccttcaaacaaggtgcaaattcttccttccccggaatggacttggggcatct
KDN01_0008_H01.b : atgtctccttcagacagtgcagaactctactaccagactgacttgggatcatcntttcgt
KDN01_0070_E11.b : TATGTCTCCTTCAGACAAGTGCCAGACTCTACCTACGCAAGACTGAACTTGGGCATCATC
KDN01_0096_C12.b : TATGTCTCCTTTCAGACAGTGCCAGACTCTACCTACGCAGGACTGAACTTGGGCATCATC
OVRT1_0067_F11.b : gtatgtttccttcaacaagtgccaaaatctcctaaggaggaatgaactgggcatcatcct
CLNT1_0057_D07.b : ctcttcaaaaagtggccgactctactacccaggaggaactggggctcatcttttcggggc
KDN01_0046_D12.b : gctggtggttgtctcctttcaaacaattgccaaacctaacccagcaagaaattgaactgg


20110601C-008625 : CT..........................................................
                   ---------+---------+---------+---------+---------+---------+ 1054
KDN01_0052_A08.b : tcttttccggggttggggccggggttcctcggctccgggttggcctgggtgtaaccattt
KDN01_0008_H01.b : ggctgtggcggcgtttcggcatctgggtggtctggctgatcgattggcttttcaaaggag
KDN01_0070_E11.b : CTttncgtgnnctgtgncggcggtctcggcatctgtggtgtcttggctgtatcgatttgg
KDN01_0096_C12.b : CTtttcgtggctgtggcgggcgttctcgcatctgtgttgtcttgccgtatccattgggcc
OVRT1_0067_F11.b : ttccggggtggggccggggttccggcctcggggtggcttgggggtacgattggcttttcc
CLNT1_0057_D07.b : gggggcgggcttcccggctctgggtggcttgccggtacaattggctttccaagagaaaaa
KDN01_0046_D12.b : ggaatcatccctttcgtggtatgtgaccggagtttccggaatataggttacacgtgatga


20110601C-008625 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1054
KDN01_0052_A08.b : gggcttttcaaaggaaaaaaaacccccaaaaaggggcctcaaggggagttttttcaaacc
KDN01_0008_H01.b : aagagcaccaaaaggtgccacaaggggatctctacaacccggccttagcaggaaccaagc
KDN01_0070_E11.b : ctttcngaangaaaagaacagcaaaaaggtgccaccagggagtcatctacaacgggcatc
KDN01_0096_C12.b : tttcgaaggaaaaaagcagcaaaaaagtgccaacagggaatcttttaaaaccgccatcca
OVRT1_0067_F11.b : gagggaaaagcaccccaaaaggggcccaagggggttcttctaaaccgggcttacgcggga
CLNT1_0057_D07.b : gcaccaaaaggtgccccgggggcttctttaacggccctcccgggaaaagccccccctggg
KDN01_0046_D12.b : tttcaagtgggctttcctaaaggcaaaaaaagcccgataagagtggccacgagggagatt


20110601C-008625 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1054
KDN01_0052_A08.b : ggccctctaaaaagaaacgagagccccgcctgaaggctctgcccctccggggcaatttcc
KDN01_0008_H01.b : ccancctgaggtctggacccccgggacatcccgaaagaacggtttggagaaattcccggg
KDN01_0070_E11.b : aagcaggaaaggagcccaccccttgagtcgtgccgccaggggcacttcagaaaggactgg
KDN01_0096_C12.b : gcggaaacaaaggcccccccctgaggcctgtcaccccaggggacttcccgaaaaggactg
OVRT1_0067_F11.b : aaaaagccccccttaaggcctggcccccgggccatcccaaaagactggttttggggaccc
CLNT1_0057_D07.b : ccgtgccccggggcctctcaaaagccggctgggagaacccggggccctgaactgggacaa
KDN01_0046_D12.b : cctcaacactgtcatctatccggagaaaaacgacccccccctaagtgctgatctgtccag


20110601C-008625 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1054
KDN01_0052_A08.b : aaaagagactggttttggaagaaaccaccggggctccctggacatgtggaaacacaaagt
KDN01_0008_H01.b : tccggaactgggaaaaaaggttcttggctacccaaaaccccacctgggggcttggaggtt
KDN01_0070_E11.b : ncttgaagcaatctcccgggctcctggacactgtgaaccaaagatttcgggaataaccca
KDN01_0096_C12.b : gtcttgaagaaactccccgggtctctggaacttggaaaaccaagagttcttggacct  
OVRT1_0067_F11.b : ccggggccctgaactggagaaacagggttctgggatcaccaaaaccccacctggggcttg
CLNT1_0057_D07.b : agggtttgggtacaccacacccccacagtggggtggggggtggcccttcccccccccgcg
KDN01_0046_D12.b : ggctcttccataataaaccagtcctggagatattctcgctggatcctctgaatttgggaa


20110601C-008625 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1054
KDN01_0052_A08.b : ctctgtggggctcccccaaaacccaccaaccttggggcttttagggaaggtgtcctctct
KDN01_0008_H01.b : tcctctgttcccccccctgtatgggagaaatatggtggggggggg              
KDN01_0070_E11.b : aaaccccaaacttgtggggcttaggaaggtgtggccccgtgcaccaccccctggaatctt
KDN01_0096_C12.b :                                                             
OVRT1_0067_F11.b : gggggtgt                                                   
CLNT1_0057_D07.b : gtgggagagccttttgggcgccccacaacaaaaaaaaaagtgtggtgggggcggtctaaa
KDN01_0046_D12.b : tacgaaggtcttctgggatttcacaaaactccacaatg                     


20110601C-008625 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1054
KDN01_0052_A08.b : gatgccccacctcggtgggggg                                     
KDN01_0008_H01.b :                                                             
KDN01_0070_E11.b : tagaaaaatgctggtgggggggggagaacttaatctctctcttttt             
KDN01_0096_C12.b :                                                             
OVRT1_0067_F11.b :                                                             
CLNT1_0057_D07.b : cccccccgcgaagaggttgttg                                     
KDN01_0046_D12.b :